FF:11356-117H6: Difference between revisions

Revision as of 17:13, 29 June 2012

Name:	Preadipocyte - subcutaneous, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	adipose tissue
dev stage	53 years old adult
sex	female
age	53
cell type	preadipocyte
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1377
catalog number	CA802s-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.131
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.391
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.431
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.181
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.184
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0623
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.719
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.12
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0908
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.444
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0623
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.453
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.248
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0623
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.405
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.165
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.559
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.478
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.378
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.658
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11981

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.351
MA0003.1	MA0003.1	0.699
MA0004.1	MA0004.1	0.654
MA0006.1	MA0006.1	0.383
MA0007.1	MA0007.1	0.323
MA0009.1	MA0009.1	0.775
MA0014.1	MA0014.1	0.296
MA0017.1	MA0017.1	0.734
MA0018.2	MA0018.2	5.49942e-7
MA0019.1	MA0019.1	0.727
MA0024.1	MA0024.1	0.0726
MA0025.1	MA0025.1	0.00723
MA0027.1	MA0027.1	0.673
MA0028.1	MA0028.1	0.589
MA0029.1	MA0029.1	0.675
MA0030.1	MA0030.1	6.85814e-5
MA0031.1	MA0031.1	6.18151e-4
MA0035.2	MA0035.2	0.00634
MA0038.1	MA0038.1	0.0385
MA0039.2	MA0039.2	0.0368
MA0040.1	MA0040.1	0.546
MA0041.1	MA0041.1	0.696
MA0042.1	MA0042.1	0.343
MA0043.1	MA0043.1	2.1506e-9
MA0046.1	MA0046.1	0.312
MA0047.2	MA0047.2	0.164
MA0048.1	MA0048.1	0.0207
MA0050.1	MA0050.1	0.879
MA0051.1	MA0051.1	0.915
MA0052.1	MA0052.1	0.0419
MA0055.1	MA0055.1	0.102
MA0057.1	MA0057.1	0.225
MA0058.1	MA0058.1	0.388
MA0059.1	MA0059.1	0.0311
MA0060.1	MA0060.1	0.00129
MA0061.1	MA0061.1	0.608
MA0062.2	MA0062.2	0.0172
MA0065.2	MA0065.2	0.717
MA0066.1	MA0066.1	0.339
MA0067.1	MA0067.1	6.48901e-4
MA0068.1	MA0068.1	0.0649
MA0069.1	MA0069.1	0.107
MA0070.1	MA0070.1	0.304
MA0071.1	MA0071.1	0.702
MA0072.1	MA0072.1	0.315
MA0073.1	MA0073.1	0.834
MA0074.1	MA0074.1	0.285
MA0076.1	MA0076.1	0.658
MA0077.1	MA0077.1	0.459
MA0078.1	MA0078.1	0.919
MA0079.2	MA0079.2	0.267
MA0080.2	MA0080.2	3.91284e-7
MA0081.1	MA0081.1	0.0537
MA0083.1	MA0083.1	0.0609
MA0084.1	MA0084.1	0.478
MA0087.1	MA0087.1	0.304
MA0088.1	MA0088.1	0.0115
MA0090.1	MA0090.1	0.399
MA0091.1	MA0091.1	0.0556
MA0092.1	MA0092.1	0.266
MA0093.1	MA0093.1	0.666
MA0099.2	MA0099.2	0.937
MA0100.1	MA0100.1	0.379
MA0101.1	MA0101.1	0.189
MA0102.2	MA0102.2	0.00358
MA0103.1	MA0103.1	0.00556
MA0104.2	MA0104.2	0.627
MA0105.1	MA0105.1	0.00797
MA0106.1	MA0106.1	0.0214
MA0107.1	MA0107.1	0.179
MA0108.2	MA0108.2	0.572
MA0111.1	MA0111.1	0.992
MA0112.2	MA0112.2	0.008
MA0113.1	MA0113.1	0.748
MA0114.1	MA0114.1	0.803
MA0115.1	MA0115.1	0.921
MA0116.1	MA0116.1	0.0149
MA0117.1	MA0117.1	0.821
MA0119.1	MA0119.1	0.0391
MA0122.1	MA0122.1	0.116
MA0124.1	MA0124.1	0.73
MA0125.1	MA0125.1	0.24
MA0131.1	MA0131.1	0.669
MA0135.1	MA0135.1	0.386
MA0136.1	MA0136.1	1.68972e-5
MA0137.2	MA0137.2	0.429
MA0138.2	MA0138.2	0.743
MA0139.1	MA0139.1	0.846
MA0140.1	MA0140.1	0.0921
MA0141.1	MA0141.1	0.522
MA0142.1	MA0142.1	0.984
MA0143.1	MA0143.1	0.862
MA0144.1	MA0144.1	0.858
MA0145.1	MA0145.1	0.656
MA0146.1	MA0146.1	0.398
MA0147.1	MA0147.1	0.186
MA0148.1	MA0148.1	0.25
MA0149.1	MA0149.1	0.379
MA0150.1	MA0150.1	0.16
MA0152.1	MA0152.1	0.0502
MA0153.1	MA0153.1	0.0534
MA0154.1	MA0154.1	0.188
MA0155.1	MA0155.1	0.923
MA0156.1	MA0156.1	7.34047e-5
MA0157.1	MA0157.1	0.0231
MA0159.1	MA0159.1	0.739
MA0160.1	MA0160.1	0.225
MA0162.1	MA0162.1	0.27
MA0163.1	MA0163.1	2.674e-6
MA0164.1	MA0164.1	0.876
MA0258.1	MA0258.1	0.607
MA0259.1	MA0259.1	0.728

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11981

Novel motif	Logo	P-value
1	1	0.176
10	10	0.0311
100	100	0.76
101	101	0.628
102	102	0.805
103	103	0.187
104	104	0.82
105	105	0.231
106	106	0.162
107	107	0.101
108	108	0.418
109	109	0.178
11	11	0.217
110	110	0.0539
111	111	0.211
112	112	0.282
113	113	0.00382
114	114	0.368
115	115	0.0163
116	116	0.0249
117	117	0.064
118	118	0.941
119	119	0.673
12	12	0.429
120	120	0.0436
121	121	0.858
122	122	0.0129
123	123	0.0575
124	124	0.881
125	125	0.1
126	126	0.715
127	127	0.799
128	128	0.308
129	129	0.902
13	13	0.676
130	130	0.558
131	131	0.16
132	132	0.651
133	133	0.0609
134	134	0.983
135	135	0.561
136	136	0.78
137	137	0.522
138	138	0.426
139	139	0.203
14	14	0.0846
140	140	0.75
141	141	0.598
142	142	0.545
143	143	0.103
144	144	0.835
145	145	0.575
146	146	0.501
147	147	0.0771
148	148	0.0769
149	149	0.163
15	15	0.998
150	150	0.0714
151	151	0.829
152	152	0.0411
153	153	0.829
154	154	0.827
155	155	0.0875
156	156	0.744
157	157	0.32
158	158	0.00968
159	159	0.315
16	16	0.0337
160	160	0.0991
161	161	0.39
162	162	0.185
163	163	0.795
164	164	0.121
165	165	0.75
166	166	0.572
167	167	0.747
168	168	0.841
169	169	0.0339
17	17	0.256
18	18	0.119
19	19	0.0182
2	2	0.268
20	20	0.579
21	21	0.00489
22	22	0.419
23	23	0.92
24	24	0.619
25	25	0.463
26	26	0.0685
27	27	0.235
28	28	0.176
29	29	0.0424
3	3	0.196
30	30	0.547
31	31	0.951
32	32	7.27825e-5
33	33	0.621
34	34	0.925
35	35	0.591
36	36	0.143
37	37	0.0753
38	38	0.882
39	39	0.211
4	4	0.896
40	40	0.149
41	41	0.26
42	42	0.614
43	43	0.626
44	44	0.0109
45	45	0.375
46	46	0.0728
47	47	0.301
48	48	0.27
49	49	0.91
5	5	0.695
50	50	0.643
51	51	0.583
52	52	0.8
53	53	0.358
54	54	0.947
55	55	0.583
56	56	0.687
57	57	0.885
58	58	0.656
59	59	0.0917
6	6	0.632
60	60	0.942
61	61	0.649
62	62	0.462
63	63	0.522
64	64	0.649
65	65	0.439
66	66	0.778
67	67	0.532
68	68	0.882
69	69	0.321
7	7	0.673
70	70	0.866
71	71	0.0401
72	72	0.961
73	73	0.0317
74	74	0.0167
75	75	0.0326
76	76	0.795
77	77	0.0471
78	78	0.989
79	79	0.0145
8	8	0.0442
80	80	0.158
81	81	0.732
82	82	0.645
83	83	0.161
84	84	0.558
85	85	0.689
86	86	0.568
87	87	0.0591
88	88	0.863
89	89	0.0657
9	9	0.289
90	90	0.76
91	91	0.862
92	92	0.619
93	93	0.626
94	94	0.571
95	95	0.0144
96	96	0.959
97	97	0.761
98	98	0.445
99	99	0.002

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11981

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000142 human subcutaneous preadipocyte sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002583 (subcutaneous preadipocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002199 (integument)
0002384 (connective tissue)
0000926 (mesoderm)
0000479 (tissue)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0005291 (embryonic tissue)
0003102 (surface structure)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0002072 (hypodermis)
0002416 (integumental system)
0006603 (presumptive mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.74!60.30!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.58!49.35!PRRX1;;chr17:1959369..1959388,+!p2@HIC1!1.51!80.96!HIC1;;chr15:57511609..57511651,+!p2@TCF12!1.46!46.42!TCF12;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.40!24.06!HOXC5;;chr8:25902876..25902936,-!p1@EBF2!1.40!23.90!EBF2;;chr12:66218255..66218304,+!p3@HMGA2!1.39!61.84!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!1.38!26.37!PRRX1;;chr11:65686802..65686818,+!p6@DRAP1!1.36!38.09!DRAP1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.34!20.66!ZBED1;;chr12:66218598..66218645,+!p2@HMGA2!1.26!78.34!HMGA2;;chr5:2751762..2751784,-!p1@IRX2!1.24!16.35!IRX2;;chr12:54393880..54393962,+!p1@HOXC9!1.21!15.27!HOXC9;;chr16:86544113..86544145,+!p1@FOXF1!1.20!18.20!FOXF1;;chr2:239756671..239756732,+!p1@TWIST2!1.18!45.65!TWIST2;;chr12:66218212..66218244,+!p5@HMGA2!1.17!20.05!HMGA2;;chr2:19558373..19558392,-!p1@OSR1!1.15!35.93!OSR1;;chr12:66218183..66218209,+!p4@HMGA2!1.15!25.44!HMGA2;;chr6:34204921..34204939,+!p3@HMGA1!1.14!377.04!HMGA1;;chr12:54380036..54380091,+!p4@HOXC10!1.13!12.65!HOXC10;;chr11:65686732..65686756,+!p2@DRAP1!1.12!51.51!DRAP1;;chr17:46675558..46675577,-!p2@HOXB6!1.11!12.03!HOXB6;;chr12:54402745..54402788,+!p1@HOXC8!1.11!11.87!HOXC8;;chr1:170632723..170632739,+!p8@PRRX1!1.10!11.72!PRRX1;;chr17:1958388..1958404,+!p1@HIC1!1.09!72.79!HIC1;;chr1:170632477..170632506,+!p6@PRRX1!1.08!10.95!PRRX1;;chr9:132427883..132427951,+!p2@PRRX2!1.07!10.64!PRRX2;;chr2:239756739..239756755,+!p2@TWIST2!1.06!18.04!TWIST2;;chr12:66218836..66218888,+!p1@HMGA2!1.05!96.38!HMGA2;;chr7:19157248..19157268,-!p1@TWIST1!1.05!28.53!TWIST1;;chr4:174450089..174450153,-!p2@HAND2!1.05!10.18!HAND2;;chr11:65687222..65687240,+!p7@DRAP1!1.03!12.65!DRAP1;;chr11:120107344..120107351,+!p1@POU2F3!1.03!11.87!POU2F3;;chr17:46675420..46675465,-!p3@HOXB6!1.03!11.10!HOXB6;;chr11:65687362..65687436,+!p3@DRAP1!1.02!43.49!DRAP1;;chr1:170633058..170633084,+!p5@PRRX1!1.02!9.56!PRRX1;;chr17:59477233..59477263,+!p1@TBX2!1.01!29.15!TBX2;;chr9:132427972..132428056,+!p1@PRRX2!1.01!12.18!PRRX2;;chr1:170632959..170632987,+!p4@PRRX1!1.01!10.18!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!1.00!9.10!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!0.98!45.80!CREB3L1;;chr17:46622070..46622109,-!p1@HOXB2!0.98!19.43!HOXB2;;chr10:131762504..131762555,-!p1@EBF3!0.98!8.64!EBF3;;chr10:119303078..119303169,+!p2@EMX2!0.97!8.33!EMX2;;chr2:102091566..102091581,-!p1@RFX8!0.96!8.17!RFX8;;chr4:174451370..174451387,-!p1@HAND2!0.95!7.86!HAND2;;chr15:96873984..96873999,+!p3@NR2F2!0.91!54.59!NR2F2;;chr15:96875041..96875052,+!p17@NR2F2!0.90!10.18!NR2F2;;chr1:170632762..170632786,+!p13@PRRX1!0.90!6.94!PRRX1;;chr11:46299539..46299620,+!p2@CREB3L1!0.89!11.72!CREB3L1;;chr1:170632439..170632465,+!p11@PRRX1!0.87!6.48!PRRX1;;chr7:27205106..27205134,-!p2@HOXA9!0.87!6.48!HOXA9;;chr12:115121962..115121987,-!p1@TBX3!0.86!56.29!TBX3;;chr5:72744594..72744609,-!p1@FOXD1!0.86!29.92!FOXD1;;chr16:86600426..86600441,+!p1@FOXC2!0.86!16.19!FOXC2;;chr15:67430351..67430366,+!p10@SMAD3!0.86!6.17!SMAD3;;chr2:102091144..102091183,-!p2@RFX8!0.86!6.17!RFX8;;chr4:111544219..111544240,-!p1@PITX2!0.86!6.17!PITX2;;chr11:65667884..65667895,-!p2@FOSL1!0.85!24.98!FOSL1;;chr4:4861385..4861398,+!p1@MSX1!0.85!18.81!MSX1;;chr17:46688334..46688385,-!p1@HOXB7!0.85!9.10!HOXB7;;chr19:46801639..46801699,+!p1@HIF3A!0.85!6.01!HIF3A;;chr1:170632115..170632136,+!p9@PRRX1!0.85!6.01!PRRX1;;chr15:96874012..96874042,+!p2@NR2F2!0.84!57.52!NR2F2;;chr8:22550982..22550999,-!p1@EGR3!0.84!17.73!EGR3;;chr12:54422217..54422239,+!p3@HOXC6!0.84!5.86!HOXC6;;chr17:46690839..46690884,-!p1@HOXB8!0.84!5.86!HOXB8;;chr17:46622114..46622138,-!p4@HOXB2!0.83!9.10!HOXB2;;chr15:83953397..83953425,-!p1@BNC1!0.83!6.63!BNC1;;chr12:54394309..54394336,+!p2@HOXC9!0.83!5.71!HOXC9;;chr1:170632137..170632172,+!p10@PRRX1!0.83!5.71!PRRX1;;chr5:133450365..133450444,+!p1@TCF7!0.82!27.30!TCF7;;chr19:42636586..42636607,-!p1@POU2F2!0.82!16.35!POU2F2;;chr7:27205136..27205164,-!p1@HOXA9!0.82!5.55!HOXA9;;chr2:119604456..119604501,-!p2@EN1!0.82!5.55!EN1;;chr15:96869255..96869291,+!p6@NR2F2!0.81!10.33!NR2F2;;chr7:27192185..27192209,-!p1@HOXA3!0.81!5.40!HOXA3;;chr19:31840130..31840160,-!p2@TSHZ3!0.80!8.64!TSHZ3;;chr1:170632683..170632696,+!p12@PRRX1!0.80!5.24!PRRX1;;chr12:66358080..66358094,+!p15@HMGA2!0.80!5.24!HMGA2;;chr20:42543441..42543497,+!p1@TOX2!0.79!25.29!TOX2;;chr7:19157043..19157088,-!p2@TWIST1!0.79!13.72!TWIST1;;chr7:44143925..44143970,+!p1@AEBP1!0.78!122.44!AEBP1;;chr2:121493425..121493474,+!p1@GLI2!0.78!11.72!GLI2;;chr11:65687243..65687276,+!p8@DRAP1!0.78!7.09!DRAP1;;chr17:46622205..46622218,-!p3@HOXB2!0.78!5.86!HOXB2;;chr7:27224842..27224872,-!p1@HOXA11!0.78!5.09!HOXA11;;chr15:96874145..96874166,+!p7@NR2F2!0.77!9.87!NR2F2;;chr17:46687959..46688007,-!p2@HOXB7!0.77!6.94!HOXB7;;chr17:46682321..46682362,-!p1@HOXB6!0.77!4.93!HOXB6;;chr12:115122318..115122331,-!p2@TBX3!0.77!4.93!TBX3;;chr12:66357214..66357233,+!p13@HMGA2!0.77!4.93!HMGA2;;chr5:2751785..2751808,-!p2@IRX2!0.77!4.93!IRX2;;chr8:49833978..49833996,-!p1@SNAI2!0.76!108.41!SNAI2;;chr8:49833948..49833973,-!p2@SNAI2!0.76!32.85!SNAI2;;chr6:1312325..1312340,+!p1@FOXQ1!0.76!8.17!FOXQ1;;chr1:170633194..170633205,+!p18@PRRX1!0.76!4.78!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.76!4.78!PRRX1;;chr12:54380404..54380433,+!p3@HOXC10!0.76!4.78!HOXC10;;chr2:176994408..176994492,+!p1@HOXD8!0.76!4.78!HOXD8;;chr11:65687158..65687216,+!p4@DRAP1!0.75!29.15!DRAP1;;chr20:42543506..42543549,+!p2@TOX2!0.75!11.87!TOX2;;chr12:54402790..54402805,+!p2@HOXC8!0.75!4.63!HOXC8;;chr4:26322267..26322334,+!p3@RBPJ!0.74!11.87!RBPJ;;chr3:141121847..141121868,+!p5@ZBTB38!0.74!7.25!ZBTB38;;chr4:111558135..111558198,-!p2@PITX2!0.74!4.47!PITX2;;chr5:139492456..139492489,+!p7@PURA!0.74!4.47!PURA;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.74!4.47!HOXC5;;chr12:66218904..66218913,+!p11@HMGA2!0.74!4.47!HMGA2;;chr12:85673977..85674015,+!p1@ALX1!0.74!4.47!ALX1;;chr1:170632310..170632321,+!p15@PRRX1!0.73!4.32!PRRX1;;chr1:158979792..158979814,+!p2@IFI16!0.71!44.41!IFI16;;chr15:96873861..96873872,+!p9@NR2F2!0.71!9.25!NR2F2;;chr1:170632647..170632659,+!p17@PRRX1!0.71!4.16!PRRX1;;chr17:46621146..46621180,-!p10@HOXB2!0.70!4.01!HOXB2;;chr6:31126291..31126399,+!p1@TCF19!0.69!42.41!TCF19;;chr19:31840313..31840380,-!p1@TSHZ3!0.69!10.95!TSHZ3;;chr12:66218573..66218596,+!p7@HMGA2!0.69!6.17!HMGA2;;chr17:46691732..46691766,-!p4@HOXB8!0.69!3.86!HOXB8;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.86!IRX1;;chr1:221052776..221052799,+!p1@HLX!0.68!7.40!HLX;;chr18:53068911..53068935,-!p4@TCF4!0.68!4.32!TCF4;;chr6:34204672..34204692,+!p1@HMGA1!0.67!482.68!HMGA1;;chr17:59477275..59477286,+!p3@TBX2!0.67!5.09!TBX2;;chr12:54402729..54402743,+!p3@HOXC8!0.67!3.70!HOXC8;;chr8:72756063..72756125,-!p1@MSC!0.66!7.86!MSC;;chr19:13134772..13134822,+!p2@NFIX!0.66!5.55!NFIX;;chr17:46621101..46621143,-!p7@HOXB2!0.66!5.09!HOXB2;;chr12:66218152..66218174,+!p10@HMGA2!0.66!3.86!HMGA2;;chr14:61116183..61116208,-!p1@SIX1!0.65!15.11!SIX1;;chr15:96874927..96874938,+!p8@NR2F2!0.65!8.17!NR2F2;;chr7:44143978..44143989,+!p2@AEBP1!0.65!6.94!AEBP1;;chr17:59477197..59477212,+!p2@TBX2!0.65!6.48!TBX2;;chr18:52989031..52989079,-!p2@TCF4!0.64!8.79!TCF4;;chr5:72744445..72744466,-!p2@FOXD1!0.64!6.01!FOXD1;;chr19:45260775..45260838,+!p5@BCL3!0.64!4.63!BCL3;;chr15:96874244..96874259,+!p5@NR2F2!0.63!8.94!NR2F2;;chr7:137564372..137564394,-!p7@CREB3L2!0.63!5.86!CREB3L2;;chr8:72756667..72756736,-!p2@MSC!0.63!5.55!MSC;;chr17:46655704..46655718,-!p2@HOXB4!0.63!5.24!HOXB4;;chr15:96881221..96881240,+!p19@NR2F2!0.63!4.47!NR2F2;;chr17:46675469..46675481,-!p4@HOXB6!0.63!3.24!HOXB6;;chr1:170632051..170632081,+!p16@PRRX1!0.63!3.24!PRRX1;;chr8:72756267..72756296,-!p4@MSC!0.62!4.93!MSC;;chr1:59249732..59249749,-!p2@JUN!0.61!44.41!JUN;;chr2:121493492..121493537,+!p2@GLI2!0.61!5.55!GLI2;;chr12:66218378..66218401,+!p6@HMGA2!0.61!5.09!HMGA2;;chr2:200322654..200322707,-!p2@SATB2!0.61!4.78!SATB2;;chr12:115121802..115121814,-!p5@TBX3!0.61!3.08!TBX3;;chr12:66218420..66218439,+!p12@HMGA2!0.61!3.08!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.61!3.08!HMGA2;;chr11:65667846..65667868,-!p1@FOSL1!0.60!94.99!FOSL1;;chr1:158979872..158979898,+!p3@IFI16!0.60!10.79!IFI16;;chr12:27485762..27485776,+!p3@ARNTL2!0.60!9.25!ARNTL2;;chr1:212873267..212873332,-!p1@BATF3!0.60!4.32!BATF3;;chr6:1389789..1389821,+!p1@FOXF2!0.60!4.32!FOXF2;;chr15:96869114..96869160,+!p11@NR2F2!0.60!4.32!NR2F2;;chr11:65686776..65686787,+!p9@DRAP1!0.60!3.70!DRAP1;;chr7:14028488..14028516,-!p2@ETV1!0.60!3.39!ETV1;;chr7:14029283..14029311,-!p1@ETV1!0.59!18.51!ETV1;;chr3:141087393..141087426,+!p3@ZBTB38!0.59!13.72!ZBTB38;;chr15:96869165..96869183,+!p20@NR2F2!0.59!2.93!NR2F2;;chr16:86612320..86612394,+!p1@FOXL1!0.59!2.93!FOXL1;;chr17:46692457..46692484,-!p2@HOXB8!0.59!2.93!HOXB8;;chr12:54378923..54378966,+!p1@HOXC10!0.59!2.93!HOXC10;;chr12:54394059..54394088,+!p3@HOXC9!0.59!2.93!HOXC9;;chr1:170633225..170633230,+!p25@PRRX1!0.59!2.93!PRRX1;;chr15:96876966..96877017,+!p12@NR2F2!0.58!4.32!NR2F2;;chr16:54320101..54320125,-!p4@IRX3!0.58!4.32!IRX3;;chr16:54320158..54320200,-!p5@IRX3!0.58!4.32!IRX3;;chr17:46622229..46622257,-!p6@HOXB2!0.58!3.39!HOXB2;;chr2:102091478..102091490,-!p3@RFX8!0.58!2.78!RFX8;;chr7:27213893..27213954,-!p1@HOXA10!0.58!2.78!HOXA10;;chr9:1050331..1050363,+!p1@DMRT2!0.58!2.78!DMRT2;;chr5:137804484..137804498,+!p2@EGR1!0.57!13.11!EGR1;;chr15:96873921..96873946,+!p1@NR2F2!0.56!93.61!NR2F2;;chr3:71007344..71007348,-!p6@FOXP1!0.56!12.65!FOXP1;;chr17:41277372..41277418,-!p1@BRCA1!0.56!11.41!BRCA1;;chr5:321810..321877,+!p1@AHRR!0.56!10.02!AHRR;;chr15:96874216..96874236,+!p13@NR2F2!0.56!4.47!NR2F2;;chr7:44143997..44144008,+!p3@AEBP1!0.56!3.55!AEBP1;;chr7:27196267..27196311,-!p1@HOXA7!0.56!2.62!HOXA7;;chr9:1051481..1051496,+!p3@DMRT2!0.56!2.62!DMRT2;;chr19:47523058..47523114,+!p1@NPAS1!0.56!2.62!NPAS1;;chr12:115121770..115121781,-!p4@TBX3!0.56!2.62!TBX3;;chr12:115122303..115122314,-!p6@TBX3!0.56!2.62!TBX3;;chr12:124873357..124873401,-!p1@NC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OLA3;;chr1:247171347..247171366,-!p2@ZNF695!0.16!1.54!ZNF695;;chr2:217277271..217277290,+!p3@SMARCAL1!0.16!1.23!SMARCAL1;;chr9:88969226..88969237,-!p4@ZCCHC6!0.16!1.08!ZCCHC6;;chr12:56401175..56401225,+!p3@IKZF4!0.16!1.08!IKZF4;;chr16:67881588..67881612,-!p2@CENPT!0.16!0.93!CENPT;;chr17:17723702..17723721,-!p7@SREBF1!0.16!0.77!SREBF1;;chr19:23299814..23299844,+!p1@ZNF730!0.16!0.77!ZNF730;;chr10:44144187..44144201,-!p3@ZNF32!0.16!0.77!ZNF32;;chr14:105927191..105927216,+!p6@MTA1!0.16!0.77!MTA1;;chr13:73636516..73636532,+!p3@KLF5!0.16!0.62!KLF5;;chr4:146860163..146860188,-!p5@ZNF827!0.16!0.62!ZNF827;;chr7:127032363..127032382,-!p6@ZNF800!0.16!0.62!ZNF800;;chr22:41864662..41864708,-!p1@PHF5A!0.15!53.97!PHF5A;;chr10:63809106..63809127,+!p1@ARID5B!0.15!16.65!ARID5B;;chr16:29817789..29817838,+!p2@MAZ!0.15!16.65!MAZ;;chr19:4065485..4065546,-!p2@ZBTB7A!0.15!10.79!ZBTB7A;;chr5:142784003..142784065,-!p2@NR3C1!0.15!9.87!NR3C1;;chr6:21597765..21597779,+!p2@SOX4!0.15!9.56!SOX4;;chr1:164528410..164528428,+!p1@PBX1!0.15!8.94!PBX1;;chr19:21264991..21265026,+!p1@ZNF714!0.15!7.71!ZNF714;;chr13:27998831..27998851,+!p2@GTF3A!0.15!6.94!GTF3A;;chr16:71496112..71496160,-!p1@ZNF23!0.15!5.09!ZNF23;;chr5:92918919..92918942,+!p1@NR2F1!0.15!4.93!NR2F1;;chr4:95129061..95129085,+!p3@SMARCAD1!0.15!3.86!SMARCAD1;;chr3:71630980..71631110,-!p3@FOXP1!0.15!3.70!FOXP1;;chr6:28367510..28367537,-!p1@ZSCAN12!0.15!3.24!ZSCAN12;;chr10:114710244..114710257,+!p3@TCF7L2!0.15!2.62!TCF7L2;;chr13:20357110..20357121,-!p2@PSPC1!0.15!2.62!PSPC1;;chr6:45389791..45389832,+!p3@RUNX2!0.15!2.47!RUNX2;;chr4:121843844..121843904,-!p1@PRDM5!0.15!2.16!PRDM5;;chr5:132299008..132299026,-!p5@AFF4!0.15!2.00!AFF4;;chr17:42298339..42298361,-!p5@UBTF!0.15!2.00!UBTF;;chr4:146402843..146402864,+!p3@SMAD1!0.15!1.70!SMAD1;;chr15:37391271..37391376,-!p5@MEIS2!0.15!1.54!MEIS2;;chr18:56532100..56532130,+!p1@ZNF532!0.15!1.54!ZNF532;;chr14:100705587..100705600,+!p5@YY1!0.15!1.54!YY1;;chr6:45390002..45390023,+!p6@RUNX2!0.15!1.39!RUNX2;;chr16:29818199..29818216,+!p11@MAZ!0.15!1.23!MAZ;;chr16:3185051..3185068,+!p3@ZNF213!0.15!1.23!ZNF213;;chr19:17356189..17356221,-!p2@NR2F6!0.15!1.23!NR2F6;;chr1:203764633..203764674,+!p2@ZC3H11A!0.15!1.23!ZC3H11A;;chr4:87968203..87968221,+!p11@AFF1!0.15!1.23!AFF1;;chr1:247171316..247171336,-!p3@ZNF695!0.15!1.08!ZNF695;;chr20:48807143..48807165,+!p11@CEBPB!0.15!1.08!CEBPB;;chr4:87967965..87967983,+!p16@AFF1!0.15!0.93!AFF1;;chr20:52185283..52185294,-!p5@ZNF217!0.15!0.77!ZNF217;;chr11:62369806..62369837,-!p8@MTA2!0.15!0.77!MTA2;;chrX:76938351..76938379,-!p7@ATRX!0.15!0.77!ATRX;;chr3:185826286..185826318,-!p5@ETV5!0.15!0.62!ETV5;;chr4:81105027..81105039,+!p3@PRDM8!0.15!0.62!PRDM8;;chr16:67063262..67063273,+!p7@CBFB!0.15!0.62!CBFB;;chr18:56530595..56530606,+!p11@ZNF532!0.15!0.62!ZNF532;;chr10:31607702..31607755,+!p3@ZEB1!0.15!0.62!ZEB1;;chr20:48807587..48807603,+!p16@CEBPB!0.15!0.62!CEBPB;;chr20:48807351..48807384,+!p1@CEBPB!0.14!128.92!CEBPB;;chr19:42759266..42759290,-!p1@ERF!0.14!39.48!ERF;;chr5:34929677..34929789,+!p1@DNAJC21!0.14!35.62!DNAJC21;;chr19:11071685..11071798,+!p1@SMARCA4!0.14!34.54!SMARCA4;;chr13:115079949..115080022,+!p1@CHAMP1!0.14!34.39!CHAMP1;;

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FF:11356-117H6: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:13, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0