FF:11343-117G2: Difference between revisions

Revision as of 20:42, 9 July 2012

Name:	Endothelial Cells - Thoracic, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	internal thoracic artery
dev stage	50 years old adult
sex	male
age	50
cell type	blood vessel endothelial cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1555
catalog number	CA308-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0776
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.216
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	1.295
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.919
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.00434
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.267
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.241
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.172
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.25
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.126
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.0907
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.703
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.363
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	1.236
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.71
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11978

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.81
MA0003.1	MA0003.1	0.281
MA0004.1	MA0004.1	0.82
MA0006.1	MA0006.1	0.1
MA0007.1	MA0007.1	0.13
MA0009.1	MA0009.1	0.886
MA0014.1	MA0014.1	0.53
MA0017.1	MA0017.1	0.103
MA0018.2	MA0018.2	6.56659e-5
MA0019.1	MA0019.1	0.0932
MA0024.1	MA0024.1	0.00101
MA0025.1	MA0025.1	0.729
MA0027.1	MA0027.1	0.512
MA0028.1	MA0028.1	0.036
MA0029.1	MA0029.1	0.0765
MA0030.1	MA0030.1	0.141
MA0031.1	MA0031.1	0.148
MA0035.2	MA0035.2	0.0344
MA0038.1	MA0038.1	0.00869
MA0039.2	MA0039.2	0.802
MA0040.1	MA0040.1	0.15
MA0041.1	MA0041.1	0.339
MA0042.1	MA0042.1	0.852
MA0043.1	MA0043.1	3.65745e-6
MA0046.1	MA0046.1	0.695
MA0047.2	MA0047.2	0.168
MA0048.1	MA0048.1	0.488
MA0050.1	MA0050.1	0.00284
MA0051.1	MA0051.1	0.0633
MA0052.1	MA0052.1	0.0184
MA0055.1	MA0055.1	0.405
MA0057.1	MA0057.1	0.178
MA0058.1	MA0058.1	0.693
MA0059.1	MA0059.1	0.285
MA0060.1	MA0060.1	6.34178e-4
MA0061.1	MA0061.1	0.497
MA0062.2	MA0062.2	0.00103
MA0065.2	MA0065.2	0.0317
MA0066.1	MA0066.1	0.255
MA0067.1	MA0067.1	0.0137
MA0068.1	MA0068.1	0.394
MA0069.1	MA0069.1	0.472
MA0070.1	MA0070.1	0.772
MA0071.1	MA0071.1	0.128
MA0072.1	MA0072.1	0.456
MA0073.1	MA0073.1	0.527
MA0074.1	MA0074.1	0.145
MA0076.1	MA0076.1	6.88134e-4
MA0077.1	MA0077.1	2.52042e-6
MA0078.1	MA0078.1	0.0182
MA0079.2	MA0079.2	0.589
MA0080.2	MA0080.2	0.82
MA0081.1	MA0081.1	0.62
MA0083.1	MA0083.1	0.347
MA0084.1	MA0084.1	0.212
MA0087.1	MA0087.1	0.122
MA0088.1	MA0088.1	0.328
MA0090.1	MA0090.1	0.37
MA0091.1	MA0091.1	0.134
MA0092.1	MA0092.1	0.662
MA0093.1	MA0093.1	0.708
MA0099.2	MA0099.2	0.0186
MA0100.1	MA0100.1	0.249
MA0101.1	MA0101.1	0.966
MA0102.2	MA0102.2	3.16776e-5
MA0103.1	MA0103.1	0.574
MA0104.2	MA0104.2	0.302
MA0105.1	MA0105.1	0.122
MA0106.1	MA0106.1	0.00697
MA0107.1	MA0107.1	0.756
MA0108.2	MA0108.2	0.626
MA0111.1	MA0111.1	0.882
MA0112.2	MA0112.2	0.0149
MA0113.1	MA0113.1	0.478
MA0114.1	MA0114.1	0.764
MA0115.1	MA0115.1	0.415
MA0116.1	MA0116.1	0.0267
MA0117.1	MA0117.1	0.214
MA0119.1	MA0119.1	0.0717
MA0122.1	MA0122.1	0.645
MA0124.1	MA0124.1	0.792
MA0125.1	MA0125.1	0.351
MA0131.1	MA0131.1	0.139
MA0135.1	MA0135.1	0.994
MA0136.1	MA0136.1	0.26
MA0137.2	MA0137.2	0.0441
MA0138.2	MA0138.2	0.475
MA0139.1	MA0139.1	0.213
MA0140.1	MA0140.1	0.449
MA0141.1	MA0141.1	0.00692
MA0142.1	MA0142.1	0.568
MA0143.1	MA0143.1	0.476
MA0144.1	MA0144.1	0.881
MA0145.1	MA0145.1	0.121
MA0146.1	MA0146.1	0.179
MA0147.1	MA0147.1	0.741
MA0148.1	MA0148.1	0.0187
MA0149.1	MA0149.1	0.0704
MA0150.1	MA0150.1	0.938
MA0152.1	MA0152.1	0.999
MA0153.1	MA0153.1	0.36
MA0154.1	MA0154.1	0.0761
MA0155.1	MA0155.1	0.0381
MA0156.1	MA0156.1	0.52
MA0157.1	MA0157.1	0.509
MA0159.1	MA0159.1	0.031
MA0160.1	MA0160.1	0.536
MA0162.1	MA0162.1	0.0888
MA0163.1	MA0163.1	0.0577
MA0164.1	MA0164.1	0.3
MA0258.1	MA0258.1	0.0375
MA0259.1	MA0259.1	0.404

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11978

Novel motif	Logo	P-value
1	1	0.356
10	10	0.95
100	100	0.817
101	101	0.342
102	102	0.502
103	103	0.132
104	104	0.945
105	105	0.305
106	106	0.00961
107	107	0.0298
108	108	0.143
109	109	0.167
11	11	0.0522
110	110	0.0556
111	111	0.0654
112	112	0.161
113	113	0.888
114	114	0.117
115	115	0.232
116	116	0.14
117	117	0.567
118	118	0.214
119	119	0.273
12	12	0.849
120	120	0.00324
121	121	0.882
122	122	0.264
123	123	0.602
124	124	0.542
125	125	0.291
126	126	0.875
127	127	0.263
128	128	0.233
129	129	0.0789
13	13	0.421
130	130	0.617
131	131	0.914
132	132	0.379
133	133	0.59
134	134	0.511
135	135	0.135
136	136	0.749
137	137	0.192
138	138	0.671
139	139	0.0713
14	14	0.827
140	140	0.967
141	141	0.39
142	142	0.837
143	143	0.012
144	144	0.822
145	145	0.0814
146	146	0.289
147	147	0.0656
148	148	0.593
149	149	0.0211
15	15	0.5
150	150	0.254
151	151	0.303
152	152	0.0325
153	153	0.0517
154	154	0.676
155	155	0.8
156	156	0.158
157	157	0.956
158	158	0.324
159	159	0.965
16	16	0.312
160	160	0.00518
161	161	0.634
162	162	0.723
163	163	0.714
164	164	0.159
165	165	0.873
166	166	0.563
167	167	0.648
168	168	0.429
169	169	0.0245
17	17	0.103
18	18	0.166
19	19	0.0606
2	2	0.255
20	20	0.977
21	21	0.751
22	22	0.243
23	23	0.109
24	24	0.738
25	25	0.858
26	26	0.376
27	27	0.201
28	28	0.266
29	29	0.476
3	3	0.517
30	30	0.896
31	31	0.681
32	32	0.0404
33	33	0.556
34	34	0.254
35	35	0.624
36	36	0.309
37	37	0.0887
38	38	0.311
39	39	0.213
4	4	0.734
40	40	0.0702
41	41	0.0895
42	42	0.884
43	43	0.314
44	44	0.145
45	45	0.3
46	46	0.0725
47	47	0.188
48	48	0.0856
49	49	0.433
5	5	0.791
50	50	0.65
51	51	0.311
52	52	0.597
53	53	0.687
54	54	0.49
55	55	0.759
56	56	0.622
57	57	0.233
58	58	0.914
59	59	0.0079
6	6	0.878
60	60	0.26
61	61	0.8
62	62	0.436
63	63	0.226
64	64	0.362
65	65	0.0755
66	66	0.983
67	67	0.349
68	68	0.218
69	69	0.133
7	7	0.693
70	70	0.106
71	71	0.368
72	72	0.697
73	73	0.0163
74	74	0.97
75	75	0.335
76	76	0.896
77	77	0.0189
78	78	0.544
79	79	1.87768e-4
8	8	0.029
80	80	0.595
81	81	0.73
82	82	0.185
83	83	0.469
84	84	0.135
85	85	0.085
86	86	0.851
87	87	0.242
88	88	0.891
89	89	0.0168
9	9	0.262
90	90	0.963
91	91	0.245
92	92	0.198
93	93	0.593
94	94	0.844
95	95	0.145
96	96	0.584
97	97	0.477
98	98	0.625
99	99	0.0171

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11978

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000051 human thoracic endothelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
1000413 (endothelial cell of artery)
0002544 (aortic endothelial cell)
0002545 (thoracic aorta endothelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000947 (aorta)
0001637 (artery)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0009569 (subdivision of trunk)
0004573 (systemic artery)
0000487 (simple squamous epithelium)
0005800 (segment of aorta)
0003509 (arterial blood vessel)
0004638 (blood vessel endothelium)
0003915 (endothelial tube)
0004700 (arterial system endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001515 (thoracic aorta)
0001917 (endothelium of artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0000915 (thoracic segment of trunk)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000047 (human endothelial cell of the artery sample)
0000048 (human endothelial cell of the aorta sample)
0000001 (sample)
0000051 (human thoracic endothelial cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.49!400.21!SOX18;;chr8:55370487..55370503,+!p1@SOX17!2.27!184.71!SOX17;;chr21:39870339..39870443,-!p1@ERG!2.10!124.76!ERG;;chr8:10588010..10588030,-!p1@SOX7!1.93!84.25!SOX7;;chr22:19748231..19748317,+!p1@TBX1!1.92!81.82!TBX1;;chr2:177053386..177053402,+!p1@HOXD1!1.88!75.34!HOXD1;;chr17:6926362..6926377,+!p1@BCL6B!1.88!74.53!BCL6B;;chr1:6479968..6479986,-!p1@HES2!1.85!70.48!HES2;;chr19:13213511..13213545,-!p2@LYL1!1.65!47.80!LYL1;;chr12:96588368..96588394,+!p3@ELK3!1.53!86.69!ELK3;;chr18:53068911..53068935,-!p4@TCF4!1.46!31.60!TCF4;;chr6:126070769..126070801,+!p1@HEY2!1.44!30.79!HEY2;;chr10:94449703..94449718,+!p1@HHEX!1.43!97.22!HHEX;;chr16:86600426..86600441,+!p1@FOXC2!1.43!62.38!FOXC2;;chr19:13213662..13213686,-!p1@LYL1!1.38!34.03!LYL1;;chr19:13213399..13213414,-!p6@LYL1!1.31!19.44!LYL1;;chr7:27205136..27205164,-!p1@HOXA9!1.26!17.01!HOXA9;;chr1:209979467..209979494,-!p1@IRF6!1.17!15.39!IRF6;;chr17:46655672..46655697,-!p3@HOXB4!1.17!13.77!HOXB4;;chr17:46688334..46688385,-!p1@HOXB7!1.14!18.63!HOXB7;;chr20:62680671..62680679,-!p2@SOX18!1.09!11.34!SOX18;;chr6:34204921..34204939,+!p3@HMGA1!1.07!327.30!HMGA1;;chr11:65429891..65429915,-!p7@RELA!1.06!10.53!RELA;;chr17:41622925..41622976,-!p3@ETV4!1.05!15.39!ETV4;;chr20:48599506..48599526,+!p1@SNAI1!1.01!60.76!SNAI1;;chr3:128206762..128206781,-!p2@GATA2!1.00!57.52!GATA2;;chr18:22932080..22932170,-!p1@ZNF521!1.00!38.89!ZNF521;;chr17:46682321..46682362,-!p1@HOXB6!1.00!8.91!HOXB6;;chr7:27205106..27205134,-!p2@HOXA9!1.00!8.91!HOXA9;;chr18:19749541..19749557,+!p1@GATA6!0.98!27.54!GATA6;;chr3:169381420..169381535,-!p1@MECOM!0.97!9.72!MECOM;;chr6:21593973..21593988,+!p1@SOX4!0.95!292.46!SOX4;;chr1:151032860..151032918,+!p1@MLLT11!0.94!93.98!MLLT11;;chr5:92918919..92918942,+!p1@NR2F1!0.93!34.84!NR2F1;;chr16:86601052..86601066,+!p4@FOXC2!0.92!7.29!FOXC2;;chr19:13213555..13213568,-!p5@LYL1!0.92!7.29!LYL1;;chr13:79177703..79177729,-!p2@POU4F1!0.92!7.29!POU4F1;;chr19:49865646..49865718,-!p1@TEAD2!0.91!63.19!TEAD2;;chr22:38597987..38598021,+!p2@MAFF!0.90!44.56!MAFF;;chr10:94449675..94449694,+!p2@HHEX!0.90!19.44!HHEX;;chr17:46655704..46655718,-!p2@HOXB4!0.90!10.53!HOXB4;;chr17:46687959..46688007,-!p2@HOXB7!0.90!9.72!HOXB7;;chr2:46524537..46524553,+!p1@EPAS1!0.89!703.20!EPAS1;;chr12:124873357..124873401,-!p1@NCOR2!0.89!81.82!NCOR2;;chr12:66218255..66218304,+!p3@HMGA2!0.88!18.63!HMGA2;;chr6:21594845..21594908,+!p6@SOX4!0.87!10.53!SOX4;;chr6:28321971..28321995,-!p1@ZNF323!0.87!6.48!ZNF323;;chr14:74256787..74256858,-!p6@C14orf43!0.87!6.48!C14orf43;;chr1:47695003..47695042,-!p2@TAL1!0.87!6.48!TAL1;;chr17:46690839..46690884,-!p1@HOXB8!0.87!6.48!HOXB8;;chr17:46691732..46691766,-!p4@HOXB8!0.87!6.48!HOXB8;;chr20:42543506..42543549,+!p2@TOX2!0.85!15.39!TOX2;;chr17:1958388..1958404,+!p1@HIC1!0.84!40.51!HIC1;;chr2:46602901..46602926,+!p7@EPAS1!0.84!8.10!EPAS1;;chr20:42543441..42543497,+!p1@TOX2!0.82!26.73!TOX2;;chr14:24837368..24837401,+!p1@NFATC4!0.82!13.77!NFATC4;;chr6:21597600..21597664,+!p3@SOX4!0.82!9.72!SOX4;;chr19:53496768..53496799,-!p1@ZNF702P!0.82!8.91!ZNF702P;;chr16:30406423..30406447,+!p4@ZNF48!0.82!5.67!ZNF48;;chr16:86600870..86600921,+!p2@FOXC2!0.82!5.67!FOXC2;;chr2:176994408..176994492,+!p1@HOXD8!0.82!5.67!HOXD8;;chr6:21597765..21597779,+!p2@SOX4!0.81!47.80!SOX4;;chr1:935467..935484,-!p1@HES4!0.80!25.11!HES4;;chr2:46602879..46602899,+!p8@EPAS1!0.80!6.48!EPAS1;;chr12:124873852..124873881,-!p3@NCOR2!0.79!34.03!NCOR2;;chr7:26191809..26191890,+!p1@NFE2L3!0.79!27.54!NFE2L3;;chr17:38498594..38498661,+!p2@RARA!0.79!18.63!RARA;;chr6:85474299..85474324,-!p1@TBX18!0.79!9.72!TBX18;;chr19:49864746..49864780,-!p2@TEAD2!0.79!7.29!TEAD2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.77!379.96!TAX1BP3;;chr6:21597370..21597408,+!p5@SOX4!0.77!8.10!SOX4;;chr3:25469724..25469773,+!p1@RARB!0.77!7.29!RARB;;chr3:169381183..169381205,-!p4@MECOM!0.77!4.86!MECOM;;chr7:27183291..27183324,-!p1@HOXA5!0.77!4.86!HOXA5;;chr8:55370720..55370733,+!p2@SOX17!0.77!4.86!SOX17;;chr16:86601088..86601105,+!p5@FOXC2!0.77!4.86!FOXC2;;chr19:13213465..13213478,-!p7@LYL1!0.77!4.86!LYL1;;chr19:9732460..9732472,-!p2@ZNF561!0.77!4.86!ZNF561;;chr9:16705069..16705086,-!p3@BNC2!0.77!4.86!BNC2;;chr4:2263809..2263854,-!p1@MXD4!0.76!204.16!MXD4;;chr14:74226961..74227020,-!p1@C14orf43!0.75!34.03!C14orf43;;chr3:168864315..168864339,-!p2@MECOM!0.75!8.10!MECOM;;chr1:935496..935509,-!p3@HES4!0.75!7.29!HES4;;chr19:1652555..1652568,-!p2@TCF3!0.74!20.25!TCF3;;chr1:23885981..23886002,-!p1@ID3!0.72!841.74!ID3;;chr12:66218598..66218645,+!p2@HMGA2!0.72!21.87!HMGA2;;chr6:126240380..126240430,+!p2@NCOA7!0.72!12.15!NCOA7;;chr12:80084137..80084165,-!p10@PAWR!0.72!5.67!PAWR;;chr12:66218836..66218888,+!p1@HMGA2!0.71!43.75!HMGA2;;chr3:178789522..178789564,-!p2@ZMAT3!0.71!34.03!ZMAT3;;chr13:72441315..72441454,-!p1@DACH1!0.71!8.91!DACH1;;chr3:170076314..170076334,+!p2@SKIL!0.71!5.67!SKIL;;chr3:25469815..25469866,+!p3@RARB!0.70!4.05!RARB;;chr3:25470062..25470084,+!p4@RARB!0.70!4.05!RARB;;chr3:25470156..25470227,+!p2@RARB!0.70!4.05!RARB;;chr6:126070748..126070768,+!p2@HEY2!0.70!4.05!HEY2;;chr7:27192185..27192209,-!p1@HOXA3!0.70!4.05!HOXA3;;chr17:46622175..46622186,-!p12@HOXB2!0.70!4.05!HOXB2;;chr17:46687935..46687950,-!p3@HOXB7!0.70!4.05!HOXB7;;chr17:46688310..46688323,-!p4@HOXB7!0.70!4.05!HOXB7;;chr12:66218003..66218018,+!p9@HMGA2!0.69!4.86!HMGA2;;chr17:7590797..7590815,-!p1@TP53!0.68!191.19!TP53;;chr12:80084167..80084197,-!p5@PAWR!0.68!9.72!PAWR;;chr11:65430554..65430579,-!p3@RELA!0.67!10.53!RELA;;chr11:65687362..65687436,+!p3@DRAP1!0.66!18.63!DRAP1;;chr17:46622440..46622477,-!p5@HOXB2!0.66!4.05!HOXB2;;chr1:120190786..120190915,-!p1@ZNF697!0.65!29.17!ZNF697;;chr12:66218183..66218209,+!p4@HMGA2!0.65!7.29!HMGA2;;chr13:41240717..41240735,-!p2@FOXO1!0.64!26.73!FOXO1;;chr20:2673383..2673441,+!p1@EBF4!0.64!5.67!EBF4;;chr11:62368696..62368759,-!p4@MTA2!0.63!23.49!MTA2;;chr9:116638565..116638606,+!p1@ZNF618!0.63!16.20!ZNF618;;chr5:92918894..92918912,+!p2@NR2F1!0.63!12.15!NR2F1;;chr5:92918768..92918783,+!p8@NR2F1!0.63!3.24!NR2F1;;chr7:139741594..139741615,-!p5@PARP12!0.63!3.24!PARP12;;chr7:1577899..1577943,+!p3@MAFK!0.63!3.24!MAFK;;chr16:86600458..86600461,+!p3@FOXC2!0.63!3.24!FOXC2;;chr17:46659728..46659749,-!p3@HOXB3!0.63!3.24!HOXB3;;chr17:6926381..6926392,+!p2@BCL6B!0.63!3.24!BCL6B;;chr18:22932004..22932021,-!p2@ZNF521!0.63!3.24!ZNF521;;chr18:53068982..53068993,-!p20@TCF4!0.63!3.24!TCF4;;chr18:53256971..53256984,-!p26@TCF4!0.63!3.24!TCF4;;chr19:13213496..13213501,-!p10@LYL1!0.63!3.24!LYL1;;chr9:14083091..14083096,-!p12@NFIB!0.63!3.24!NFIB;;chrY:21906594..21906622,-!p1@KDM5D!0.63!3.24!KDM5D;;chr22:19747040..19747054,+!p3@TBX1!0.63!3.24!TBX1;;chr2:176987441..176987454,+!p1@HOXD9!0.63!3.24!HOXD9;;chr2:237077022..237077038,-!p1@GBX2!0.63!3.24!GBX2;;chr12:124873824..124873833,-!p19@NCOR2!0.63!3.24!NCOR2;;chr19:46801639..46801699,+!p1@HIF3A!0.63!3.24!HIF3A;;chr20:42602000..42602034,+!p5@TOX2!0.63!3.24!TOX2;;chr3:141087393..141087426,+!p3@ZBTB38!0.62!14.58!ZBTB38;;chr19:56152332..56152347,+!p4@ZNF580!0.62!8.10!ZNF580;;chr2:231280954..231280965,+!p2@SP100!0.62!6.48!SP100;;chr6:10415276..10415341,-!p2@TFAP2A!0.62!4.05!TFAP2A;;chr19:42759266..42759290,-!p1@ERF!0.61!119.09!ERF;;chr15:96873984..96873999,+!p3@NR2F2!0.61!26.73!NR2F2;;chr9:35732647..35732678,+!p2@CREB3!0.61!20.25!CREB3;;chr6:21597514..21597578,+!p4@SOX4!0.61!5.67!SOX4;;chr19:45908292..45908374,-!p1@PPP1R13L!0.60!31.60!PPP1R13L;;chr3:52001426..52001447,-!p3@PCBP4!0.60!9.72!PCBP4;;chr8:106330656..106330684,+!p1@ZFPM2!0.60!8.91!ZFPM2;;chr18:53257001..53257015,-!p5@TCF4!0.60!5.67!TCF4;;chr17:41623692..41623715,-!p1@ETV4!0.59!14.58!ETV4;;chr8:128749984..128750033,+!p4@MYC!0.59!12.15!MYC;;chr17:46622070..46622109,-!p1@HOXB2!0.59!7.29!HOXB2;;chr12:53574398..53574412,+!p3@ZNF740!0.59!5.67!ZNF740;;chr8:145159277..145159282,+!p7@MAF1!0.59!4.86!MAF1;;chr17:46622114..46622138,-!p4@HOXB2!0.59!4.86!HOXB2;;chr3:52001448..52001478,-!p2@PCBP4!0.58!47.80!PCBP4;;chr4:2263861..2263883,-!p2@MXD4!0.58!20.25!MXD4;;chr1:156470515..156470542,-!p2@MEF2D!0.58!17.82!MEF2D;;chr1:151032833..151032850,+!p3@MLLT11!0.58!7.29!MLLT11;;chr19:19303047..19303079,+!p3@RFXANK!0.58!7.29!RFXANK;;chr1:221052776..221052799,+!p1@HLX!0.58!5.67!HLX;;chr19:56671612..56671626,+!p4@ZNF444!0.58!4.86!ZNF444;;chr2:85360499..85360598,+!p1@TCF7L1!0.57!18.63!TCF7L1;;chr9:14314131..14314147,-!p2@NFIB!0.57!18.63!NFIB;;chr7:148892557..148892580,+!p4@ZNF282!0.57!8.91!ZNF282;;chr2:74375081..74375092,-!p2@BOLA3!0.57!6.48!BOLA3;;chr11:65430535..65430549,-!p4@RELA!0.57!3.24!RELA;;chr15:83953397..83953425,-!p1@BNC1!0.57!3.24!BNC1;;chr17:46622205..46622218,-!p3@HOXB2!0.57!3.24!HOXB2;;chr17:46675420..46675465,-!p3@HOXB6!0.57!3.24!HOXB6;;chr19:19303794..19303805,+!p5@RFXANK!0.57!3.24!RFXANK;;chr11:128563948..128564003,+!p1@FLI1!0.56!39.70!FLI1;;chr15:66994561..66994597,+!p2@SMAD6!0.56!7.29!SMAD6;;chr1:151032922..151032951,+!p2@MLLT11!0.56!4.86!MLLT11;;chr9:14082760..14082775,-!p6@NFIB!0.56!4.86!NFIB;;chr4:146436110..146436135,+!p6@SMAD1!0.56!4.05!SMAD1;;chr8:145159846..145159889,+!p6@MAF1!0.56!4.05!MAF1;;chr8:80679993..80680011,-!p1@HEY1!0.55!4.05!HEY1;;chr6:85473156..85473210,-!p2@TBX18!0.55!3.24!TBX18;;chr17:41622834..41622883,-!p6@ETV4!0.55!3.24!ETV4;;chr19:19303731..19303783,+!p1@RFXANK!0.54!74.53!RFXANK;;chr7:149470641..149470694,-!p1@ZNF467!0.54!13.77!ZNF467;;chr19:56111680..56111716,+!p1@ZNF524!0.54!11.34!ZNF524;;chr1:151032782..151032801,+!p4@MLLT11!0.54!5.67!MLLT11;;chr15:90544532..90544563,+!p1@ZNF710!0.54!5.67!ZNF710;;chr1:151032739..151032748,+!p6@MLLT11!0.54!3.24!MLLT11;;chr6:43140095..43140145,+!p5@SRF!0.54!3.24!SRF;;chr7:27183263..27183284,-!p2@HOXA5!0.54!2.43!HOXA5;;chr7:35293685..35293718,-!p1@TBX20!0.54!2.43!TBX20;;chr8:30890810..30890880,-!p1@PURG!0.54!2.43!PURG;;chr8:55370884..55370896,+!p5@SOX17!0.54!2.43!SOX17;;chr15:66994523..66994541,+!p5@SMAD6!0.54!2.43!SMAD6;;chr18:53068893..53068902,-!p28@TCF4!0.54!2.43!TCF4;;chr19:13136057..13136085,+!p11@NFIX!0.54!2.43!NFIX;;chr12:66218420..66218439,+!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+|ffid_belonging_in_development=CL:0002546,CL:0000222
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11343-117G2: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:42, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0