FF:11457-119A8: Difference between revisions

Revision as of 21:07, 9 July 2012

Name:	Bronchial Epithelial Cell, donor5
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	lung
dev stage	63 years old adult
sex	female
age	63
cell type	epithelial cell of lung, bronchial
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1473
catalog number	CA502-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0792
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.00803
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.205
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0447
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.392
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.252
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.164
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.899
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0833
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	1.313
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.913
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.28
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.403
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.247
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0775
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12058

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.878
MA0003.1	MA0003.1	0.381
MA0004.1	MA0004.1	0.945
MA0006.1	MA0006.1	0.103
MA0007.1	MA0007.1	0.163
MA0009.1	MA0009.1	0.199
MA0014.1	MA0014.1	0.631
MA0017.1	MA0017.1	0.171
MA0018.2	MA0018.2	0.466
MA0019.1	MA0019.1	0.252
MA0024.1	MA0024.1	0.777
MA0025.1	MA0025.1	0.513
MA0027.1	MA0027.1	0.278
MA0028.1	MA0028.1	0.501
MA0029.1	MA0029.1	0.106
MA0030.1	MA0030.1	0.593
MA0031.1	MA0031.1	0.0308
MA0035.2	MA0035.2	0.0576
MA0038.1	MA0038.1	0.428
MA0039.2	MA0039.2	0.00387
MA0040.1	MA0040.1	0.564
MA0041.1	MA0041.1	0.364
MA0042.1	MA0042.1	0.937
MA0043.1	MA0043.1	0.578
MA0046.1	MA0046.1	0.243
MA0047.2	MA0047.2	0.569
MA0048.1	MA0048.1	0.452
MA0050.1	MA0050.1	1.01063e-9
MA0051.1	MA0051.1	7.84296e-5
MA0052.1	MA0052.1	0.573
MA0055.1	MA0055.1	7.206e-4
MA0057.1	MA0057.1	0.0517
MA0058.1	MA0058.1	0.725
MA0059.1	MA0059.1	0.399
MA0060.1	MA0060.1	0.00142
MA0061.1	MA0061.1	0.864
MA0062.2	MA0062.2	0.367
MA0065.2	MA0065.2	0.0354
MA0066.1	MA0066.1	0.113
MA0067.1	MA0067.1	0.209
MA0068.1	MA0068.1	0.0313
MA0069.1	MA0069.1	0.884
MA0070.1	MA0070.1	0.199
MA0071.1	MA0071.1	0.874
MA0072.1	MA0072.1	0.768
MA0073.1	MA0073.1	0.671
MA0074.1	MA0074.1	0.692
MA0076.1	MA0076.1	0.949
MA0077.1	MA0077.1	0.425
MA0078.1	MA0078.1	0.411
MA0079.2	MA0079.2	0.22
MA0080.2	MA0080.2	0.0682
MA0081.1	MA0081.1	0.197
MA0083.1	MA0083.1	0.823
MA0084.1	MA0084.1	0.127
MA0087.1	MA0087.1	0.621
MA0088.1	MA0088.1	0.465
MA0090.1	MA0090.1	0.0214
MA0091.1	MA0091.1	0.843
MA0092.1	MA0092.1	0.702
MA0093.1	MA0093.1	0.843
MA0099.2	MA0099.2	5.59633e-15
MA0100.1	MA0100.1	0.0237
MA0101.1	MA0101.1	0.801
MA0102.2	MA0102.2	0.029
MA0103.1	MA0103.1	8.31468e-6
MA0104.2	MA0104.2	0.974
MA0105.1	MA0105.1	0.862
MA0106.1	MA0106.1	6.60975e-7
MA0107.1	MA0107.1	0.896
MA0108.2	MA0108.2	0.00119
MA0111.1	MA0111.1	0.554
MA0112.2	MA0112.2	0.127
MA0113.1	MA0113.1	0.185
MA0114.1	MA0114.1	0.0909
MA0115.1	MA0115.1	0.154
MA0116.1	MA0116.1	0.423
MA0117.1	MA0117.1	0.406
MA0119.1	MA0119.1	0.615
MA0122.1	MA0122.1	0.386
MA0124.1	MA0124.1	0.929
MA0125.1	MA0125.1	0.378
MA0131.1	MA0131.1	0.397
MA0135.1	MA0135.1	0.0421
MA0136.1	MA0136.1	0.929
MA0137.2	MA0137.2	0.0146
MA0138.2	MA0138.2	0.204
MA0139.1	MA0139.1	0.767
MA0140.1	MA0140.1	0.697
MA0141.1	MA0141.1	0.271
MA0142.1	MA0142.1	0.0881
MA0143.1	MA0143.1	0.715
MA0144.1	MA0144.1	0.651
MA0145.1	MA0145.1	0.053
MA0146.1	MA0146.1	0.0151
MA0147.1	MA0147.1	0.807
MA0148.1	MA0148.1	0.443
MA0149.1	MA0149.1	0.0622
MA0150.1	MA0150.1	0.298
MA0152.1	MA0152.1	0.0995
MA0153.1	MA0153.1	0.0983
MA0154.1	MA0154.1	0.331
MA0155.1	MA0155.1	0.289
MA0156.1	MA0156.1	0.559
MA0157.1	MA0157.1	0.0385
MA0159.1	MA0159.1	0.861
MA0160.1	MA0160.1	0.217
MA0162.1	MA0162.1	0.124
MA0163.1	MA0163.1	0.705
MA0164.1	MA0164.1	0.683
MA0258.1	MA0258.1	0.326
MA0259.1	MA0259.1	0.996

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12058

Novel motif	Logo	P-value
1	1	0.909
10	10	0.398
100	100	0.294
101	101	0.0013
102	102	0.305
103	103	0.379
104	104	0.276
105	105	0.0765
106	106	0.0733
107	107	0.0812
108	108	0.588
109	109	0.0012
11	11	0.109
110	110	0.128
111	111	0.586
112	112	0.77
113	113	0.292
114	114	0.841
115	115	0.214
116	116	0.507
117	117	0.491
118	118	0.858
119	119	0.299
12	12	0.223
120	120	0.207
121	121	0.293
122	122	0.0231
123	123	0.166
124	124	0.155
125	125	0.381
126	126	0.741
127	127	0.229
128	128	0.53
129	129	0.135
13	13	0.0509
130	130	0.204
131	131	0.418
132	132	0.278
133	133	0.00161
134	134	0.362
135	135	0.987
136	136	0.0722
137	137	0.0506
138	138	0.737
139	139	0.815
14	14	0.827
140	140	0.865
141	141	0.948
142	142	0.0376
143	143	0.919
144	144	0.155
145	145	0.388
146	146	0.011
147	147	0.126
148	148	0.125
149	149	0.814
15	15	0.713
150	150	0.249
151	151	0.495
152	152	0.0336
153	153	0.475
154	154	0.446
155	155	0.449
156	156	0.433
157	157	0.798
158	158	0.189
159	159	0.929
16	16	0.28
160	160	0.137
161	161	0.149
162	162	0.13
163	163	0.864
164	164	0.959
165	165	0.375
166	166	0.409
167	167	0.0781
168	168	0.997
169	169	0.0762
17	17	0.16
18	18	0.64
19	19	0.655
2	2	0.109
20	20	0.971
21	21	0.837
22	22	0.102
23	23	0.591
24	24	0.275
25	25	0.729
26	26	0.0714
27	27	0.317
28	28	0.858
29	29	0.62
3	3	0.856
30	30	0.0352
31	31	0.685
32	32	0.479
33	33	0.16
34	34	0.514
35	35	0.207
36	36	0.704
37	37	0.345
38	38	0.296
39	39	0.382
4	4	0.274
40	40	0.00233
41	41	0.876
42	42	0.992
43	43	0.919
44	44	0.786
45	45	0.124
46	46	0.6
47	47	0.45
48	48	0.0882
49	49	0.604
5	5	0.302
50	50	0.416
51	51	0.947
52	52	0.348
53	53	0.493
54	54	0.777
55	55	0.444
56	56	0.489
57	57	0.728
58	58	0.724
59	59	0.0613
6	6	0.307
60	60	0.299
61	61	0.677
62	62	0.546
63	63	0.271
64	64	0.302
65	65	0.274
66	66	0.25
67	67	0.218
68	68	0.579
69	69	0.202
7	7	0.452
70	70	0.146
71	71	0.533
72	72	0.61
73	73	0.0107
74	74	0.0343
75	75	0.467
76	76	0.456
77	77	0.00781
78	78	0.18
79	79	0.641
8	8	0.305
80	80	0.638
81	81	0.161
82	82	0.798
83	83	0.823
84	84	0.806
85	85	0.624
86	86	0.919
87	87	0.00864
88	88	0.613
89	89	0.197
9	9	0.666
90	90	0.00278
91	91	0.895
92	92	0.576
93	93	0.787
94	94	0.504
95	95	0.0174
96	96	0.545
97	97	0.799
98	98	0.362
99	99	0.0178

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12058

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000015 human bronchial epithelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002202 (epithelial cell of tracheobronchial tree)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002632 (epithelial cell of lower respiratory tract)
0002368 (respiratory epithelial cell)
0002328 (bronchial epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004802 (respiratory tract epithelium)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000485 (simple columnar epithelium)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0004815 (lower respiratory tract epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0000115 (lung epithelium)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0007196 (tracheobronchial tree)
0002031 (epithelium of bronchus)
0002185 (bronchus)
0000065 (respiratory tract)
0001558 (lower respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000015 (human bronchial epithelial cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000223 (endodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr17:7493405..7493419,-!p1@SOX15!2.59!384.04!SOX15;;chr1:209979467..209979494,-!p1@IRF6!1.91!90.66!IRF6;;chr1:6479968..6479986,-!p1@HES2!1.91!79.52!HES2;;chr6:34524093..34524135,-!p1@SPDEF!1.90!78.61!SPDEF;;chr15:83953397..83953425,-!p1@BNC1!1.88!85.54!BNC1;;chr12:54785054..54785072,-!p4@ZNF385A!1.86!80.12!ZNF385A;;chr12:54785074..54785122,-!p2@ZNF385A!1.85!104.52!ZNF385A;;chr6:34524049..34524089,-!p2@SPDEF!1.80!61.45!SPDEF;;chr1:209979411..209979433,-!p2@IRF6!1.77!57.83!IRF6;;chr6:34524025..34524045,-!p3@SPDEF!1.67!46.08!SPDEF;;chr3:189507432..189507459,+!p1@TP63!1.65!43.37!TP63;;chr5:134369905..134369972,-!p1@PITX1!1.61!59.64!PITX1;;chr17:7492684..7492778,-!p2@SOX15!1.60!80.12!SOX15;;chr22:19748231..19748317,+!p1@TBX1!1.60!39.16!TBX1;;chr6:10415276..10415341,-!p2@TFAP2A!1.57!43.67!TFAP2A;;chr3:111314186..111314204,-!p1@ZBED2!1.57!36.14!ZBED2;;chr11:34642612..34642646,+!p1@EHF!1.55!34.64!EHF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.55!34.64!ZBED1;;chr6:10412600..10412637,-!p1@TFAP2A!1.49!48.49!TFAP2A;;chr2:46524897..46524911,+!p2@EPAS1!1.43!71.39!EPAS1;;chr8:10588010..10588030,-!p1@SOX7!1.43!25.90!SOX7;;chr5:2751762..2751784,-!p1@IRX2!1.34!21.08!IRX2;;chr19:45908292..45908374,-!p1@PPP1R13L!1.30!165.36!PPP1R13L;;chr12:66218255..66218304,+!p3@HMGA2!1.24!43.07!HMGA2;;chr12:66218598..66218645,+!p2@HMGA2!1.21!70.18!HMGA2;;chr5:134369879..134369898,-!p2@PITX1!1.10!11.45!PITX1;;chr8:49833948..49833973,-!p2@SNAI2!1.09!72.59!SNAI2;;chr6:10415484..10415508,-!p3@TFAP2A!1.08!11.14!TFAP2A;;chr2:122042770..122042785,-!p1@TFCP2L1!1.08!11.14!TFCP2L1;;chr14:21566731..21566836,-!p1@ZNF219!1.07!116.87!ZNF219;;chr11:65686802..65686818,+!p6@DRAP1!1.07!18.67!DRAP1;;chr19:42636586..42636607,-!p1@POU2F2!1.06!29.22!POU2F2;;chr1:2461692..2461710,-!p1@HES5!1.06!10.54!HES5;;chr2:63277948..63277974,+!p1@OTX1!1.06!10.54!OTX1;;chr8:102504651..102504683,+!p1@GRHL2!1.06!10.54!GRHL2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.03!120.48!ZC3H12A;;chr6:1312325..1312340,+!p1@FOXQ1!1.03!15.96!FOXQ1;;chr19:45579725..45579743,-!p1@ZNF296!1.00!41.57!ZNF296;;chr2:45236540..45236577,-!p1@SIX2!1.00!9.04!SIX2;;chr8:128748308..128748324,+!p2@MYC!0.98!243.37!MYC;;chr14:90085820..90085840,-!p6@FOXN3!0.97!8.43!FOXN3;;chr15:83953373..83953386,-!p2@BNC1!0.97!8.43!BNC1;;chr17:80797886..80797906,-!p1@ZNF750!0.97!8.43!ZNF750;;chr14:37131058..37131139,+!p1@PAX9!0.97!8.43!PAX9;;chr1:209979449..209979460,-!p3@IRF6!0.96!8.13!IRF6;;chr11:129245526..129245553,+!p1@BARX2!0.95!7.83!BARX2;;chr14:38064429..38064486,-!p1@FOXA1!0.95!7.83!FOXA1;;chr8:49833978..49833996,-!p1@SNAI2!0.94!163.55!SNAI2;;chr11:65686732..65686756,+!p2@DRAP1!0.94!33.74!DRAP1;;chr12:48298765..48298783,-!p2@VDR!0.94!16.57!VDR;;chr12:66218212..66218244,+!p5@HMGA2!0.94!11.45!HMGA2;;chr11:34645791..34645836,+!p3@EHF!0.93!7.53!EHF;;chr5:2751785..2751808,-!p2@IRX2!0.93!7.53!IRX2;;chr6:10412576..10412599,-!p5@TFAP2A!0.93!7.53!TFAP2A;;chr13:73633131..73633149,+!p1@KLF5!0.92!81.63!KLF5;;chr1:8934931..8934947,-!p4@ENO1!0.92!24.70!ENO1;;chr20:50721803..50721857,-!p2@ZFP64!0.92!11.75!ZFP64;;chr1:24645832..24645853,+!p1@GRHL3!0.92!7.23!GRHL3;;chr4:57547454..57547469,-!p1@HOPX!0.90!6.93!HOPX;;chr6:10413188..10413249,-!p7@TFAP2A!0.88!6.63!TFAP2A;;chr11:120107344..120107351,+!p1@POU2F3!0.87!7.83!POU2F3;;chr2:46524878..46524891,+!p3@EPAS1!0.86!11.45!EPAS1;;chr20:22565185..22565223,-!p3@FOXA2!0.86!6.33!FOXA2;;chr17:45928443..45928473,-!p2@SP6!0.86!6.33!SP6;;chr12:7079780..7079791,-!p2@PHB2!0.85!34.04!PHB2;;chr17:41623692..41623715,-!p1@ETV4!0.85!27.71!ETV4;;chr2:239756671..239756732,+!p1@TWIST2!0.85!20.78!TWIST2;;chr3:111314230..111314241,-!p2@ZBED2!0.85!6.02!ZBED2;;chr1:8938709..8938720,-!p3@ENO1!0.84!303.62!ENO1;;chr11:65667846..65667868,-!p1@FOSL1!0.84!166.87!FOSL1;;chr2:85360499..85360598,+!p1@TCF7L1!0.83!34.64!TCF7L1;;chr9:100615499..100615519,+!p1@FOXE1!0.79!5.12!FOXE1;;chr2:239756739..239756755,+!p2@TWIST2!0.78!9.04!TWIST2;;chr20:55204351..55204377,+!p1@TFAP2C!0.78!6.63!TFAP2C;;chr12:27485762..27485776,+!p3@ARNTL2!0.77!14.16!ARNTL2;;chr6:34204672..34204692,+!p1@HMGA1!0.74!566.27!HMGA1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.74!359.34!TAX1BP3;;chr12:48298785..48298828,-!p1@VDR!0.74!26.20!VDR;;chr5:3595977..3595999,+!p1@IRX1!0.74!4.52!IRX1;;chr22:19746969..19746987,+!p2@TBX1!0.74!4.52!TBX1;;chr17:7492504..7492520,-!p3@SOX15!0.74!4.52!SOX15;;chr12:66218183..66218209,+!p4@HMGA2!0.73!9.04!HMGA2;;chr17:41623009..41623053,-!p4@ETV4!0.72!7.23!ETV4;;chr16:86612320..86612394,+!p1@FOXL1!0.72!4.22!FOXL1;;chr12:66218469..66218477,+!p16@HMGA2!0.72!4.22!HMGA2;;chr14:37051798..37051831,-!p1@NKX2-8!0.72!4.22!NKX2-8;;chr5:3595934..3595957,+!p2@IRX1!0.72!4.22!IRX1;;chr20:42295745..42295765,+!p1@MYBL2!0.70!75.30!MYBL2;;chr12:66218573..66218596,+!p7@HMGA2!0.70!6.33!HMGA2;;chr12:66218836..66218888,+!p1@HMGA2!0.69!41.57!HMGA2;;chr11:65554528..65554546,+!p1@OVOL1!0.69!3.92!OVOL1;;chr20:22565370..22565388,-!p2@FOXA2!0.69!3.92!FOXA2;;chr3:189507523..189507535,+!p5@TP63!0.69!3.92!TP63;;chr4:57522674..57522699,-!p5@HOPX!0.69!3.92!HOPX;;chr8:128747661..128747703,+!p6@MYC!0.68!5.42!MYC;;chr17:38465413..38465438,+!p5@RARA!0.67!6.33!RARA;;chr15:67418119..67418162,+!p5@SMAD3!0.67!4.22!SMAD3;;chr11:64073022..64073056,+!p1@ESRRA!0.66!49.40!ESRRA;;chr10:48355030..48355090,+!p1@ZNF488!0.66!4.82!ZNF488;;chr6:10415263..10415274,-!p8@TFAP2A!0.66!3.61!TFAP2A;;chr3:189507460..189507471,+!p3@TP63!0.66!3.61!TP63;;chr19:45908286..45908291,-!p3@PPP1R13L!0.66!3.61!PPP1R13L;;chr1:209979375..209979386,-!p4@IRF6!0.66!3.61!IRF6;;chr11:47236584..47236679,+!p1@DDB2!0.65!44.28!DDB2;;chr19:42759300..42759324,-!p2@ERF!0.65!9.94!ERF;;chr12:66218378..66218401,+!p6@HMGA2!0.65!5.72!HMGA2;;chr1:8938736..8938756,-!p1@ENO1!0.64!4414.47!ENO1;;chr19:1863568..1863586,-!p1@KLF16!0.64!130.72!KLF16;;chr6:34204921..34204939,+!p3@HMGA1!0.63!117.17!HMGA1;;chr16:4322832..4322907,-!p1@TFAP4!0.63!29.52!TFAP4;;chr11:65687362..65687436,+!p3@DRAP1!0.63!17.47!DRAP1;;chr6:20402102..20402152,+!p1@E2F3!0.63!15.66!E2F3;;chr17:41623075..41623101,-!p9@ETV4!0.63!3.92!ETV4;;chr20:18038521..18038571,-!p1@OVOL2!0.63!3.31!OVOL2;;chr14:74256787..74256858,-!p6@C14orf43!0.63!3.31!C14orf43;;chr1:8938766..8938774,-!p2@ENO1!0.61!257.23!ENO1;;chr12:66218003..66218018,+!p9@HMGA2!0.61!3.92!HMGA2;;chr16:29817841..29817865,+!p1@MAZ!0.60!78.61!MAZ;;chr19:4065485..4065546,-!p2@ZBTB7A!0.60!31.93!ZBTB7A;;chr22:42229210..42229229,+!p3@SREBF2!0.60!7.83!SREBF2;;chr17:41622925..41622976,-!p3@ETV4!0.60!4.82!ETV4;;chr15:83953474..83953483,-!p3@BNC1!0.60!3.01!BNC1;;chr17:45928521..45928539,-!p1@SP6!0.60!3.01!SP6;;chr17:8027418..8027432,-!p1@HES7!0.60!3.01!HES7;;chr3:181429704..181429722,+!p1@SOX2!0.60!3.01!SOX2;;chr4:299227..299272,-!p1@ZNF732!0.60!3.01!ZNF732;;chr19:45908278..45908282,-!p5@PPP1R13L!0.60!3.01!PPP1R13L;;chr1:24646263..24646277,+!p4@GRHL3!0.60!3.01!GRHL3;;chr20:22564895..22564910,-!p1@FOXA2!0.60!3.01!FOXA2;;chr6:34204642..34204664,+!p2@HMGA1!0.59!472.89!HMGA1;;chr2:242576460..242576600,-!p1@THAP4!0.59!53.92!THAP4;;chr16:2059754..2059777,-!p2@ZNF598!0.59!12.05!ZNF598;;chr2:60778035..60778060,-!p4@BCL11A!0.59!3.61!BCL11A;;chr8:128748470..128748487,+!p1@MYC!0.58!379.52!MYC;;chr19:42759266..42759290,-!p1@ERF!0.58!108.74!ERF;;chr17:41623667..41623682,-!p8@ETV4!0.58!3.01!ETV4;;chr11:62369229..62369289,-!p2@MTA2!0.57!49.10!MTA2;;chr20:42295713..42295738,+!p2@MYBL2!0.57!19.58!MYBL2;;chr16:54964740..54964789,+!p1@IRX5!0.57!4.22!IRX5;;chr19:42636625..42636632,-!p2@POU2F2!0.57!2.71!POU2F2;;chr1:10856665..10856683,-!p4@CASZ1!0.57!2.71!CASZ1;;chr1:154975229..154975247,+!p6@ZBTB7B!0.57!2.71!ZBTB7B;;chr1:24645921..24645973,+!p2@GRHL3!0.57!2.71!GRHL3;;chr12:66218420..66218439,+!p12@HMGA2!0.57!2.71!HMGA2;;chr2:113994526..113994556,-!p3@PAX8!0.57!2.71!PAX8;;chr11:62369291..62369351,-!p1@MTA2!0.56!60.84!MTA2;;chr12:66218443..66218461,+!p8@HMGA2!0.56!3.61!HMGA2;;chr19:56154958..56155027,+!p1@ZNF581!0.55!107.53!ZNF581;;chr10:104155455..104155479,+!p1@NFKB2!0.55!47.29!NFKB2;;chr11:46722560..46722595,+!p1@ZNF408!0.55!16.57!ZNF408;;chr6:10412392..10412409,-!p4@TFAP2A!0.55!3.01!TFAP2A;;chr8:128747757..128747800,+!p7@MYC!0.54!3.61!MYC;;chr15:67418047..67418093,+!p4@SMAD3!0.54!3.31!SMAD3;;chr19:19303731..19303783,+!p1@RFXANK!0.53!72.29!RFXANK;;chr12:132628963..132629027,+!p1@NOC4L!0.53!44.88!NOC4L;;chr11:65687158..65687216,+!p4@DRAP1!0.53!17.17!DRAP1;;chr5:72744594..72744609,-!p1@FOXD1!0.53!13.55!FOXD1;;chr14:61116183..61116208,-!p1@SIX1!0.53!11.14!SIX1;;chr17:4890695..4890773,-!p2@CAMTA2!0.53!9.04!CAMTA2;;chr12:53625966..53626012,-!p2@RARG!0.53!7.53!RARG;;chr14:21566882..21566898,-!p3@ZNF219!0.53!3.92!ZNF219;;chr19:58341656..58341694,+!p5@ZNF587!0.53!3.01!ZNF587;;chr20:50722202..50722217,-!p7@ZFP64!0.53!2.41!ZFP64;;chr17:7492979..7492991,-!p5@SOX15!0.53!2.41!SOX15;;chr8:102504690..102504704,+!p3@GRHL2!0.53!2.41!GRHL2;;chr8:128747709..128747723,+!p20@MYC!0.53!2.41!MYC;;chr11:34642656..34642667,+!p2@EHF!0.53!2.41!EHF;;chr2:45236579..45236596,-!p2@SIX2!0.53!2.41!SIX2;;chr4:57522598..57522664,-!p3@HOPX!0.53!2.41!HOPX;;chr16:29817789..29817838,+!p2@MAZ!0.52!40.96!MAZ;;chr19:19496728..19496813,+!p2@GATAD2A!0.52!35.84!GATAD2A;;chr16:8962544..8962584,-!p2@CARHSP1!0.52!6.33!CARHSP1;;chr22:42666593..42666623,-!p@chr22:42666593..42666623,-!0.52!6.33!TCF20;;chr1:40367530..40367597,-!p1@MYCL1!0.52!4.82!MYCL1;;chr22:21355896..21355920,-!p4@THAP7!0.52!2.71!THAP7;;chr9:35732592..35732640,+!p1@CREB3!0.51!38.86!CREB3;;chr17:3571887..3571918,-!p2@TAX1BP3!0.51!32.83!TAX1BP3;;chr22:41697497..41697515,+!p2@ZC3H7B!0.51!7.53!ZC3H7B;;chr7:148892557..148892580,+!p4@ZNF282!0.51!7.53!ZNF282;;chr11:65430554..65430579,-!p3@RELA!0.51!6.93!RELA;;chr19:17356189..17356221,-!p2@NR2F6!0.51!4.22!NR2F6;;chr16:67881588..67881612,-!p2@CENPT!0.51!3.31!CENPT;;chr22:21355865..21355886,-!p5@THAP7!0.51!2.71!THAP7;;chr3:12329320..12329338,+!p4@PPARG!0.51!2.41!PPARG;;chr12:10875658..10875708,-!p2@CSDA!0.50!6.02!CSDA;;chr16:4322948..4322975,-!p3@TFAP4!0.50!5.12!TFAP4;;chr11:62369352..62369373,-!p5@MTA2!0.49!10.24!MTA2;;chr11:62369383..62369399,-!p6@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!BCL3;;chr1:247095286..247095297,-!p4@AHCTF1!0.14!0.90!AHCTF1;;chr7:137563905..137563916,-!p11@CREB3L2!0.14!0.90!CREB3L2;;chr8:103665947..103665981,-!p3@KLF10!0.14!0.90!KLF10;;chr8:128750983..128751021,+!p11@MYC!0.14!0.90!MYC;;chr5:72743793..72743855,-!p4@FOXD1!0.14!0.60!FOXD1;;chr6:21595079..21595108,+!p13@SOX4!0.14!0.60!SOX4;;chr8:146024397..146024416,+!p2@ZNF517!0.14!0.60!ZNF517;;chr10:8095593..8095625,+!p3@GATA3!0.14!0.60!GATA3;;chr1:935519..935532,-!p4@HES4!0.14!0.60!HES4;;chr12:10875831..10876025,-!p1@CSDA!0.13!100.90!CSDA;;chr17:40540377..40540481,-!p1@STAT3!0.13!61.75!STAT3;;chr1:156470556..156470643,-!p1@MEF2D!0.13!48.49!MEF2D;;chr17:38474489..38474548,+!p1@RARA!0.13!38.25!RARA;;chr7:139762641..139762768,-!p1@PARP12!0.13!15.96!PARP12;;chr6:7107939..7107993,+!p1@RREB1!0.13!13.86!RREB1;;chr9:14314566..14314618,-!p1@NFIB!0.13!13.86!NFIB;;chr20:33413416..33413466,-!p1@NCOA6!0.13!13.86!NCOA6;;chr14:62162258..62162269,+!p2@HIF1A!0.13!11.14!HIF1A;;chr6:41514078..41514158,+!p1@FOXP4!0.13!10.24!FOXP4;;chr20:306177..306211,+!p2@SOX12!0.13!7.53!SOX12;;chr8:144766617..144766664,+!p1@ZNF707!0.13!5.42!ZNF707;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.13!5.12!GLIS2;;chr19:53289995..53290050,-!p1@ZNF600!0.13!4.22!ZNF600;;chr19:19303619..19303651,+!p2@RFXANK!0.13!3.92!RFXANK;;chr7:99156212..99156244,+!p3@ZNF655!0.13!3.92!ZNF655;;chr19:2819854..2819891,+!p1@ZNF554!0.13!3.61!ZNF554;;chr14:74353576..74353589,+!p3@ZNF410!0.13!3.31!ZNF410;;chr7:74072135..74072171,+!p2@GTF2I!0.13!3.01!GTF2I;;chr1:61547894..61547968,+!p2@NFIA!0.13!2.71!NFIA;;chr19:59084872..59084920,-!p2@MZF1!0.13!2.41!MZF1;;chr22:20748456..20748488,+!p2@ZNF74!0.13!2.41!ZNF74;;chr10:77161133..77161176,-!p3@ZNF503!0.13!1.81!ZNF503;;chr14:74353454..74353469,+!p4@ZNF410!0.13!1.51!ZNF410;;chr2:208030886..208030917,-!p4@KLF7!0.13!1.51!KLF7;;chr15:96874145..96874166,+!p7@NR2F2!0.13!1.51!NR2F2;;chr17:7382834..7382855,-!p6@ZBTB4!0.13!1.20!ZBTB4;;chr18:47814010..47814021,-!p3@CXXC1!0.13!1.20!CXXC1;;chr7:148844581..148844606,+!p2@ZNF398!0.13!1.20!ZNF398;;chr9:137218262..137218273,+!p5@RXRA!0.13!1.20!RXRA;;chr19:37708814..37708838,+!p2@ZNF383!0.13!0.90!ZNF383;;chr2:174830540..174830563,-!p8@SP3!0.13!0.90!SP3;;chr11:47270477..47270494,+!p4@NR1H3!0.13!0.90!NR1H3;;chr14:64971404..64971415,+!p7@ZBTB1!0.13!0.90!ZBTB1;;chr19:58978463..58978476,+!p2@ZNF324!0.13!0.90!ZNF324;;chr1:61547811..61547837,+!p7@NFIA!0.13!0.90!NFIA;;chr3:75834722..75834733,-!p2@ZNF717!0.13!0.60!ZNF717;;chr4:103422232..103422241,+!p6@NFKB1!0.13!0.60!NFKB1;;chr4:81104985..81105005,+!p4@PRDM8!0.13!0.60!PRDM8;;chr17:42295777..42295816,-!p7@UBTF!0.13!0.60!UBTF;;chr17:42298386..42298397,-!p20@UBTF!0.13!0.60!UBTF;;chr12:10875612..10875631,-!p9@CSDA!0.13!0.60!CSDA;;chr12:27485889..27485900,+!p4@ARNTL2!0.13!0.60!ARNTL2;;chr13:41556186..41556208,-!p12@ELF1!0.13!0.60!ELF1;;chr1:151032860..151032918,+!p1@MLLT11!0.12!13.55!MLLT11;;chr19:9251052..9251079,+!p2@ZNF317!0.12!11.14!ZNF317;;chr1:151319710..151319774,-!p1@RFX5!0.12!11.14!RFX5;;chr20:62601243..62601291,-!p1@ZNF512B!0.12!11.14!ZNF512B;;chr6:43139153..43139232,+!p1@SRF!0.12!10.84!SRF;;chr22:38597987..38598021,+!p2@MAFF!0.12!6.63!MAFF;;chr20:49547691..49547724,-!p2@ADNP!0.12!6.63!ADNP;;chr4:2263861..2263883,-!p2@MXD4!0.12!6.33!MXD4;;chr16:2273645..2273671,+!p2@E4F1!0.12!5.42!E4F1;;chr2:60780753..60780800,-!p1@BCL11A!0.12!5.12!BCL11A;;chr12:96588279..96588299,+!p4@ELK3!0.12!4.82!ELK3;;chr16:31085514..31085576,-!p1@ZNF668!0.12!4.22!ZNF668;;chr19:58220517..58220583,-!p1@ZNF154!0.12!3.01!ZNF154;;
+|ffid_belonging_in_development=CL:0000223
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11457-119A8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 21:07, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0