FF:10032-101E5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004710 | ||
|accession_numbers=CAGE;DRX008712;DRR009584;DRZ001009;DRZ002394;DRZ012359;DRZ013744 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0002581,UBERON:0001872,UBERON:0000200,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010032 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/postcentral%2520gyrus%252c%2520adult%252c%2520pool1.CNhs10638.10032-101E5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/postcentral%2520gyrus%252c%2520adult%252c%2520pool1.CNhs10638.10032-101E5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/postcentral%2520gyrus%252c%2520adult%252c%2520pool1.CNhs10638.10032-101E5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/postcentral%2520gyrus%252c%2520adult%252c%2520pool1.CNhs10638.10032-101E5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/postcentral%2520gyrus%252c%2520adult%252c%2520pool1.CNhs10638.10032-101E5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10032-101E5 | |id=FF:10032-101E5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010032 | ||
|is_obsolete= | |||
|library_id=CNhs10638 | |||
|library_id_phase_based=2:CNhs10638 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10032 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10032 | |||
|name=postcentral gyrus, adult, pool1 | |name=postcentral gyrus, adult, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10638,LSID657,release008,COMPLETED | |profile_hcage=CNhs10638,LSID657,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:636573 | |rna_catalog_number=Cat:636573 | ||
| Line 54: | Line 76: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.01E+07 | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.49561897359507e-294!GO:0005737;cytoplasm;1.2023019002573e-164!GO:0044444;cytoplasmic part;4.58110591370954e-111!GO:0043226;organelle;1.11481576487227e-89!GO:0043229;intracellular organelle;3.44980695683758e-89!GO:0043227;membrane-bound organelle;5.29366618083291e-83!GO:0043231;intracellular membrane-bound organelle;7.06530144306038e-83!GO:0044422;organelle part;2.20310727160533e-65!GO:0044446;intracellular organelle part;2.17748364608192e-64!GO:0005515;protein binding;4.86252425769868e-62!GO:0032991;macromolecular complex;4.28318872764961e-58!GO:0005739;mitochondrion;3.06168107588103e-46!GO:0016043;cellular component organization and biogenesis;3.43913090628958e-43!GO:0031090;organelle membrane;1.50241245818305e-42!GO:0033036;macromolecule localization;5.60575986742238e-39!GO:0030529;ribonucleoprotein complex;7.04167804682316e-39!GO:0015031;protein transport;7.04167804682316e-39!GO:0008104;protein localization;6.3097054144469e-36!GO:0003723;RNA binding;3.49864586961945e-35!GO:0045184;establishment of protein localization;4.09135315507369e-35!GO:0044429;mitochondrial part;4.09135315507369e-35!GO:0043234;protein complex;8.38503840894303e-33!GO:0046907;intracellular transport;6.69627621324617e-30!GO:0031975;envelope;9.13626194118517e-29!GO:0031967;organelle envelope;1.37809002933819e-28!GO:0043233;organelle lumen;2.23960898435864e-28!GO:0031974;membrane-enclosed lumen;2.23960898435864e-28!GO:0051649;establishment of cellular localization;6.15946392533871e-28!GO:0051641;cellular localization;7.38256832227335e-28!GO:0016192;vesicle-mediated transport;9.53365577934434e-27!GO:0019538;protein metabolic process;8.2975835753049e-25!GO:0044428;nuclear part;8.52413286621598e-25!GO:0005740;mitochondrial envelope;1.80387949489077e-24!GO:0031966;mitochondrial membrane;6.36855931129646e-24!GO:0005840;ribosome;1.4705452818001e-23!GO:0005829;cytosol;2.20615658748447e-23!GO:0006119;oxidative phosphorylation;2.58499120485828e-22!GO:0006886;intracellular protein transport;4.29221791071421e-22!GO:0044260;cellular macromolecule metabolic process;7.47842581616278e-22!GO:0044267;cellular protein metabolic process;3.08845489772222e-21!GO:0016071;mRNA metabolic process;4.11654657429841e-21!GO:0019866;organelle inner membrane;4.11654657429841e-21!GO:0044238;primary metabolic process;6.6817986502855e-21!GO:0005794;Golgi apparatus;1.00736755909059e-20!GO:0006396;RNA processing;1.19111614802047e-20!GO:0005743;mitochondrial inner membrane;1.29455491557392e-20!GO:0031982;vesicle;6.50712694218944e-20!GO:0044237;cellular metabolic process;1.55006470464051e-19!GO:0031988;membrane-bound vesicle;2.18206885588822e-19!GO:0008380;RNA splicing;3.16306149714885e-19!GO:0031410;cytoplasmic vesicle;3.16306149714885e-19!GO:0003735;structural constituent of ribosome;4.86813911708185e-19!GO:0016023;cytoplasmic membrane-bound vesicle;8.02514467377624e-19!GO:0006996;organelle organization and biogenesis;3.49386386003307e-18!GO:0006397;mRNA processing;7.2729639160935e-18!GO:0043170;macromolecule metabolic process;7.88826569924234e-18!GO:0006412;translation;1.75460404965024e-17!GO:0009058;biosynthetic process;2.39581043823187e-17!GO:0044455;mitochondrial membrane part;6.87483385471356e-17!GO:0005746;mitochondrial respiratory chain;2.3372902246387e-16!GO:0065003;macromolecular complex assembly;4.06910792277978e-16!GO:0012505;endomembrane system;5.44562283738851e-16!GO:0000166;nucleotide binding;6.99100380239344e-16!GO:0006512;ubiquitin cycle;7.88234624379006e-16!GO:0033279;ribosomal subunit;1.67782256356597e-15!GO:0022607;cellular component assembly;1.20095206627308e-14!GO:0043412;biopolymer modification;1.71052092603724e-14!GO:0031981;nuclear lumen;1.89651724927209e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.95427081244884e-14!GO:0003954;NADH dehydrogenase activity;1.95427081244884e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.95427081244884e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.2380155129402e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;2.65375984278876e-14!GO:0016462;pyrophosphatase activity;3.0721537559244e-14!GO:0044249;cellular biosynthetic process;4.91849928148619e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.13884734330847e-14!GO:0006464;protein modification process;6.41516916463419e-14!GO:0016874;ligase activity;8.61976044146575e-14!GO:0005634;nucleus;1.00598953231008e-13!GO:0006810;transport;1.23487975132221e-13!GO:0043687;post-translational protein modification;1.52959951054743e-13!GO:0017111;nucleoside-triphosphatase activity;1.8468842783871e-13!GO:0009059;macromolecule biosynthetic process;2.22591426586543e-13!GO:0005681;spliceosome;3.43611917103162e-13!GO:0031980;mitochondrial lumen;3.46765177940872e-13!GO:0005759;mitochondrial matrix;3.46765177940872e-13!GO:0045045;secretory pathway;4.52933322659682e-13!GO:0007264;small GTPase mediated signal transduction;6.04145744325419e-13!GO:0048770;pigment granule;9.73405527449803e-13!GO:0042470;melanosome;9.73405527449803e-13!GO:0030135;coated vesicle;1.17640062886291e-12!GO:0032553;ribonucleotide binding;1.22463692142309e-12!GO:0032555;purine ribonucleotide binding;1.22463692142309e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.29020627060742e-12!GO:0045271;respiratory chain complex I;1.29020627060742e-12!GO:0005747;mitochondrial respiratory chain complex I;1.29020627060742e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.65679463424455e-12!GO:0042773;ATP synthesis coupled electron transport;1.65679463424455e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.50828053294169e-12!GO:0006457;protein folding;5.45828783395371e-12!GO:0017076;purine nucleotide binding;9.41173081885572e-12!GO:0048193;Golgi vesicle transport;1.72115293242246e-11!GO:0008092;cytoskeletal protein binding;1.75330340435591e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.78654346047734e-11!GO:0019829;cation-transporting ATPase activity;2.58410266385179e-11!GO:0007399;nervous system development;2.83686379545055e-11!GO:0044445;cytosolic part;5.36234760614097e-11!GO:0051234;establishment of localization;7.7645624963596e-11!GO:0043005;neuron projection;8.49610809005439e-11!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.31110602097382e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.11771919630767e-10!GO:0044431;Golgi apparatus part;1.55076710085695e-10!GO:0005783;endoplasmic reticulum;1.89669893836113e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.93775242488524e-10!GO:0051179;localization;2.21379927720831e-10!GO:0005768;endosome;4.8357206928534e-10!GO:0003924;GTPase activity;4.84355144343382e-10!GO:0022618;protein-RNA complex assembly;5.03649182310922e-10!GO:0030695;GTPase regulator activity;8.43887222790639e-10!GO:0051082;unfolded protein binding;8.9531455049361e-10!GO:0008135;translation factor activity, nucleic acid binding;1.09817541944018e-09!GO:0006793;phosphorus metabolic process;1.24210015870365e-09!GO:0006796;phosphate metabolic process;1.24210015870365e-09!GO:0051186;cofactor metabolic process;1.44222546208799e-09!GO:0005083;small GTPase regulator activity;1.6594203007762e-09!GO:0043283;biopolymer metabolic process;2.11020489460736e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.42456394329995e-09!GO:0015935;small ribosomal subunit;2.44215517218401e-09!GO:0006605;protein targeting;2.51233821564884e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;3.04554825661792e-09!GO:0008639;small protein conjugating enzyme activity;3.07507328764252e-09!GO:0030136;clathrin-coated vesicle;3.20594789531055e-09!GO:0006511;ubiquitin-dependent protein catabolic process;3.87539567033865e-09!GO:0000502;proteasome complex (sensu Eukaryota);4.04823264090412e-09!GO:0005654;nucleoplasm;4.05048446221017e-09!GO:0005525;GTP binding;4.29671818026566e-09!GO:0019941;modification-dependent protein catabolic process;4.80860303634356e-09!GO:0043632;modification-dependent macromolecule catabolic process;4.80860303634356e-09!GO:0015986;ATP synthesis coupled proton transport;4.82393476014724e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.82393476014724e-09!GO:0019787;small conjugating protein ligase activity;5.41498296075326e-09!GO:0004842;ubiquitin-protein ligase activity;6.3005605064116e-09!GO:0043228;non-membrane-bound organelle;6.3005605064116e-09!GO:0043232;intracellular non-membrane-bound organelle;6.3005605064116e-09!GO:0008565;protein transporter activity;6.442902723051e-09!GO:0044257;cellular protein catabolic process;6.44933958741532e-09!GO:0044265;cellular macromolecule catabolic process;8.85147088150582e-09!GO:0032940;secretion by cell;1.34874788437193e-08!GO:0044451;nucleoplasm part;2.04615714635086e-08!GO:0007010;cytoskeleton organization and biogenesis;2.12688467011831e-08!GO:0016044;membrane organization and biogenesis;2.1282321135917e-08!GO:0008134;transcription factor binding;2.62843189571547e-08!GO:0044248;cellular catabolic process;3.26882535348266e-08!GO:0000139;Golgi membrane;3.96540781503095e-08!GO:0046034;ATP metabolic process;7.31601885179325e-08!GO:0016881;acid-amino acid ligase activity;8.2206214990628e-08!GO:0009060;aerobic respiration;1.02597288016506e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.23086748602517e-07!GO:0030163;protein catabolic process;1.51323247075013e-07!GO:0032561;guanyl ribonucleotide binding;1.53515050428433e-07!GO:0019001;guanyl nucleotide binding;1.53515050428433e-07!GO:0043285;biopolymer catabolic process;1.67662511651256e-07!GO:0045333;cellular respiration;1.9441876743535e-07!GO:0015631;tubulin binding;2.01799530648376e-07!GO:0005761;mitochondrial ribosome;2.0671703616062e-07!GO:0000313;organellar ribosome;2.0671703616062e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.26440653099828e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.37360918219843e-07!GO:0006163;purine nucleotide metabolic process;2.45932927581802e-07!GO:0009141;nucleoside triphosphate metabolic process;2.58342051546965e-07!GO:0006754;ATP biosynthetic process;2.64915493323356e-07!GO:0006753;nucleoside phosphate metabolic process;2.64915493323356e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.7689907368575e-07!GO:0006461;protein complex assembly;2.7689907368575e-07!GO:0032559;adenyl ribonucleotide binding;2.82392804130155e-07!GO:0006732;coenzyme metabolic process;2.94693825801695e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.53576468346119e-07!GO:0009150;purine ribonucleotide metabolic process;3.53576468346119e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.65487862196621e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.65487862196621e-07!GO:0015934;large ribosomal subunit;3.65487862196621e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.23783013936583e-07!GO:0048475;coated membrane;5.0340012061154e-07!GO:0030117;membrane coat;5.0340012061154e-07!GO:0048471;perinuclear region of cytoplasm;5.11104651439346e-07!GO:0044440;endosomal part;5.52938132146293e-07!GO:0010008;endosome membrane;5.52938132146293e-07!GO:0006164;purine nucleotide biosynthetic process;5.80669673541152e-07!GO:0030036;actin cytoskeleton organization and biogenesis;5.80669673541152e-07!GO:0009057;macromolecule catabolic process;6.28957610186616e-07!GO:0009259;ribonucleotide metabolic process;6.85963733437354e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;6.98259056605181e-07!GO:0000375;RNA splicing, via transesterification reactions;6.98259056605181e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.98259056605181e-07!GO:0016310;phosphorylation;7.65917379495179e-07!GO:0009152;purine ribonucleotide biosynthetic process;8.08583956713316e-07!GO:0003743;translation initiation factor activity;8.40690177482726e-07!GO:0019717;synaptosome;9.03408258589856e-07!GO:0005524;ATP binding;9.90079568536631e-07!GO:0044432;endoplasmic reticulum part;1.00827566691955e-06!GO:0006413;translational initiation;1.03670434835268e-06!GO:0006446;regulation of translational initiation;1.16375992839529e-06!GO:0008287;protein serine/threonine phosphatase complex;1.39143857395532e-06!GO:0007242;intracellular signaling cascade;1.525007926825e-06!GO:0030554;adenyl nucleotide binding;1.56577211708858e-06!GO:0005905;coated pit;1.57465785775958e-06!GO:0019226;transmission of nerve impulse;1.75037336409013e-06!GO:0009055;electron carrier activity;1.83972864053312e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.84824817505989e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.84824817505989e-06!GO:0030425;dendrite;1.91754191312995e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.1719922176485e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.1719922176485e-06!GO:0030029;actin filament-based process;2.72897852584797e-06!GO:0009260;ribonucleotide biosynthetic process;2.9066610681715e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.42077139328812e-06!GO:0006099;tricarboxylic acid cycle;3.60034026261978e-06!GO:0046356;acetyl-CoA catabolic process;3.60034026261978e-06!GO:0006913;nucleocytoplasmic transport;3.7229596925373e-06!GO:0031965;nuclear membrane;4.36851530759065e-06!GO:0008021;synaptic vesicle;4.44182990256351e-06!GO:0051169;nuclear transport;5.40058786261567e-06!GO:0022890;inorganic cation transmembrane transporter activity;5.47454882376649e-06!GO:0016604;nuclear body;5.62926770208523e-06!GO:0007265;Ras protein signal transduction;5.82468411256682e-06!GO:0005770;late endosome;6.33496042344446e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.87764256239091e-06!GO:0003779;actin binding;8.72897276804757e-06!GO:0045259;proton-transporting ATP synthase complex;9.15962270921403e-06!GO:0016607;nuclear speck;9.72242105989919e-06!GO:0009109;coenzyme catabolic process;1.02304969609145e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.07434993422027e-05!GO:0006084;acetyl-CoA metabolic process;1.07757699434759e-05!GO:0051056;regulation of small GTPase mediated signal transduction;1.07757699434759e-05!GO:0005635;nuclear envelope;1.08852471771792e-05!GO:0005789;endoplasmic reticulum membrane;1.08852471771792e-05!GO:0005798;Golgi-associated vesicle;1.14473130065399e-05!GO:0010467;gene expression;1.32677043594404e-05!GO:0042623;ATPase activity, coupled;1.54375527000895e-05!GO:0019899;enzyme binding;1.78227802675916e-05!GO:0015630;microtubule cytoskeleton;1.84789193135523e-05!GO:0030120;vesicle coat;1.9377428964951e-05!GO:0030662;coated vesicle membrane;1.9377428964951e-05!GO:0005769;early endosome;2.59922217148827e-05!GO:0032446;protein modification by small protein conjugation;2.65570449748101e-05!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.90901669901974e-05!GO:0006897;endocytosis;2.93452323214085e-05!GO:0010324;membrane invagination;2.93452323214085e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.04123966625268e-05!GO:0015399;primary active transmembrane transporter activity;3.04123966625268e-05!GO:0008654;phospholipid biosynthetic process;3.04440950483925e-05!GO:0005874;microtubule;3.08260826276801e-05!GO:0016567;protein ubiquitination;3.09714434045378e-05!GO:0016887;ATPase activity;3.20231315969926e-05!GO:0005730;nucleolus;4.10896680691061e-05!GO:0031252;leading edge;4.13720393894944e-05!GO:0051187;cofactor catabolic process;4.353640596151e-05!GO:0046467;membrane lipid biosynthetic process;6.92732069205174e-05!GO:0005773;vacuole;6.96951699693096e-05!GO:0003712;transcription cofactor activity;8.56865779105206e-05!GO:0043492;ATPase activity, coupled to movement of substances;9.00295384599983e-05!GO:0009056;catabolic process;9.68899084796945e-05!GO:0017038;protein import;0.000111516875351984!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000111538549550121!GO:0007268;synaptic transmission;0.000117662144054573!GO:0051128;regulation of cellular component organization and biogenesis;0.000131208319574439!GO:0008017;microtubule binding;0.000138156051597028!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000142054382957096!GO:0008047;enzyme activator activity;0.000145802830120695!GO:0006650;glycerophospholipid metabolic process;0.00016009648209408!GO:0051188;cofactor biosynthetic process;0.000160597992321396!GO:0030133;transport vesicle;0.000161571269577219!GO:0016311;dephosphorylation;0.000200283775514627!GO:0006888;ER to Golgi vesicle-mediated transport;0.000210608891338928!GO:0030118;clathrin coat;0.000216845847460048!GO:0048489;synaptic vesicle transport;0.000221532720394304!GO:0005096;GTPase activator activity;0.00025219385257614!GO:0016301;kinase activity;0.000267617228006875!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000287425790659372!GO:0006752;group transfer coenzyme metabolic process;0.000289259275617877!GO:0005085;guanyl-nucleotide exchange factor activity;0.000295362675160147!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000304066105369905!GO:0004721;phosphoprotein phosphatase activity;0.000318851002166726!GO:0007269;neurotransmitter secretion;0.000328880367860211!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000331562956022474!GO:0006643;membrane lipid metabolic process;0.000334800223657141!GO:0046578;regulation of Ras protein signal transduction;0.000354990546136244!GO:0016740;transferase activity;0.000383697727318837!GO:0005741;mitochondrial outer membrane;0.000383697727318837!GO:0005793;ER-Golgi intermediate compartment;0.000391403768095053!GO:0015980;energy derivation by oxidation of organic compounds;0.00041901932705884!GO:0006613;cotranslational protein targeting to membrane;0.000425953499093601!GO:0007019;microtubule depolymerization;0.000477272535243089!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000488215393160895!GO:0000151;ubiquitin ligase complex;0.000511990776487706!GO:0000245;spliceosome assembly;0.00052341161178565!GO:0044453;nuclear membrane part;0.000556122120974629!GO:0005643;nuclear pore;0.000572912723316499!GO:0016791;phosphoric monoester hydrolase activity;0.00058084074151179!GO:0006403;RNA localization;0.000591615114878736!GO:0000902;cell morphogenesis;0.000592776419711773!GO:0032989;cellular structure morphogenesis;0.000592776419711773!GO:0051246;regulation of protein metabolic process;0.000640084655180909!GO:0006470;protein amino acid dephosphorylation;0.000650823918460827!GO:0050657;nucleic acid transport;0.000717707790217397!GO:0051236;establishment of RNA localization;0.000717707790217397!GO:0050658;RNA transport;0.000717707790217397!GO:0019902;phosphatase binding;0.000735674206438318!GO:0030384;phosphoinositide metabolic process;0.00083659870436288!GO:0045055;regulated secretory pathway;0.000859989889113384!GO:0000323;lytic vacuole;0.000865884751050981!GO:0005764;lysosome;0.000865884751050981!GO:0030027;lamellipodium;0.000910646091434362!GO:0019867;outer membrane;0.000943402064693277!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000977288703396838!GO:0019208;phosphatase regulator activity;0.000977288703396838!GO:0031968;organelle outer membrane;0.000988336737838483!GO:0016568;chromatin modification;0.00100004323712152!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00102316832366425!GO:0009108;coenzyme biosynthetic process;0.00104942757527813!GO:0031902;late endosome membrane;0.00110348654470466!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00115205586674293!GO:0016197;endosome transport;0.00115841842223178!GO:0000159;protein phosphatase type 2A complex;0.00120016504570507!GO:0030427;site of polarized growth;0.00122123551341796!GO:0050767;regulation of neurogenesis;0.0012398003856587!GO:0030424;axon;0.00126106413232843!GO:0030426;growth cone;0.00126445616817008!GO:0045786;negative regulation of progression through cell cycle;0.00129755466749488!GO:0001505;regulation of neurotransmitter levels;0.00130631560902254!GO:0005516;calmodulin binding;0.00133226376177406!GO:0005774;vacuolar membrane;0.00135362435393506!GO:0004722;protein serine/threonine phosphatase activity;0.00135362435393506!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00140844601987694!GO:0048523;negative regulation of cellular process;0.00156737342366709!GO:0008601;protein phosphatase type 2A regulator activity;0.00160079769401876!GO:0031114;regulation of microtubule depolymerization;0.00162927427161776!GO:0007026;negative regulation of microtubule depolymerization;0.00162927427161776!GO:0031072;heat shock protein binding;0.00167989257395265!GO:0005938;cell cortex;0.00170982456148698!GO:0009117;nucleotide metabolic process;0.00172701499040052!GO:0046488;phosphatidylinositol metabolic process;0.00173186609918355!GO:0006323;DNA packaging;0.00177339424200186!GO:0048487;beta-tubulin binding;0.00178395496908762!GO:0003729;mRNA binding;0.00180537417369805!GO:0005869;dynactin complex;0.00181728925710019!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00185413819546981!GO:0004812;aminoacyl-tRNA ligase activity;0.00185413819546981!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00185413819546981!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00185413819546981!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00185413819546981!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00185413819546981!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00186194093579738!GO:0012506;vesicle membrane;0.00206885117167406!GO:0030054;cell junction;0.00217311563968841!GO:0004674;protein serine/threonine kinase activity;0.00218925809383499!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00222691664549864!GO:0051087;chaperone binding;0.00229384989675365!GO:0007266;Rho protein signal transduction;0.00245263564257095!GO:0043623;cellular protein complex assembly;0.00253924772743615!GO:0016126;sterol biosynthetic process;0.00268321377300594!GO:0003724;RNA helicase activity;0.00271861085742894!GO:0065002;intracellular protein transport across a membrane;0.00284654201807921!GO:0003697;single-stranded DNA binding;0.00286484171139899!GO:0019888;protein phosphatase regulator activity;0.00287238724417794!GO:0048699;generation of neurons;0.00296323607076795!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00311962639124027!GO:0030532;small nuclear ribonucleoprotein complex;0.00313194938704338!GO:0043038;amino acid activation;0.00315580120401343!GO:0006418;tRNA aminoacylation for protein translation;0.00315580120401343!GO:0043039;tRNA aminoacylation;0.00315580120401343!GO:0008026;ATP-dependent helicase activity;0.00317639472458196!GO:0008610;lipid biosynthetic process;0.00321088466767439!GO:0048167;regulation of synaptic plasticity;0.00324967009992271!GO:0046474;glycerophospholipid biosynthetic process;0.00332228884663315!GO:0006891;intra-Golgi vesicle-mediated transport;0.00344150761441028!GO:0007272;ensheathment of neurons;0.00344150761441028!GO:0008366;axon ensheathment;0.00344150761441028!GO:0051427;hormone receptor binding;0.00359649059045386!GO:0022008;neurogenesis;0.00359663224318479!GO:0006414;translational elongation;0.00382846625934659!GO:0043209;myelin sheath;0.00390102447340825!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00390102447340825!GO:0055083;monovalent inorganic anion homeostasis;0.00390102447340825!GO:0055064;chloride ion homeostasis;0.00390102447340825!GO:0030644;cellular chloride ion homeostasis;0.00390102447340825!GO:0044433;cytoplasmic vesicle part;0.00392571114287268!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00396904316713902!GO:0032011;ARF protein signal transduction;0.00410581550868829!GO:0032012;regulation of ARF protein signal transduction;0.00410581550868829!GO:0005048;signal sequence binding;0.00410581550868829!GO:0016050;vesicle organization and biogenesis;0.00418071786995188!GO:0003714;transcription corepressor activity;0.00420928462173798!GO:0016564;transcription repressor activity;0.00421206045702534!GO:0030660;Golgi-associated vesicle membrane;0.00437397134081474!GO:0009966;regulation of signal transduction;0.00439938212467808!GO:0005765;lysosomal membrane;0.00442855654538923!GO:0005839;proteasome core complex (sensu Eukaryota);0.00448125957904048!GO:0006644;phospholipid metabolic process;0.00465262111801469!GO:0006665;sphingolipid metabolic process;0.00487916399811773!GO:0008154;actin polymerization and/or depolymerization;0.00501557871140223!GO:0030182;neuron differentiation;0.0050983641933898!GO:0006606;protein import into nucleus;0.00514764171752427!GO:0006892;post-Golgi vesicle-mediated transport;0.00522726603606518!GO:0003746;translation elongation factor activity;0.00533684318075086!GO:0043566;structure-specific DNA binding;0.00537673555538754!GO:0051168;nuclear export;0.00542331268141006!GO:0051170;nuclear import;0.00546793220320213!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00546793220320213!GO:0004667;prostaglandin-D synthase activity;0.00546793220320213!GO:0050802;circadian sleep/wake cycle, sleep;0.00546793220320213!GO:0022410;circadian sleep/wake cycle process;0.00546793220320213!GO:0042749;regulation of circadian sleep/wake cycle;0.00546793220320213!GO:0044437;vacuolar part;0.00546793220320213!GO:0005875;microtubule associated complex;0.00558924133330023!GO:0006904;vesicle docking during exocytosis;0.00563583098795325!GO:0006612;protein targeting to membrane;0.00572922010529965!GO:0001508;regulation of action potential;0.00603823113795475!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0060805282723768!GO:0019903;protein phosphatase binding;0.00615057986568481!GO:0035257;nuclear hormone receptor binding;0.00617991652924269!GO:0022406;membrane docking;0.00626152676569751!GO:0048278;vesicle docking;0.00626152676569751!GO:0051261;protein depolymerization;0.00628865684549003!GO:0015629;actin cytoskeleton;0.00649985231068199!GO:0051028;mRNA transport;0.0065382834877446!GO:0031901;early endosome membrane;0.00667461712338691!GO:0050811;GABA receptor binding;0.00672036372432462!GO:0030658;transport vesicle membrane;0.00681670718971936!GO:0050803;regulation of synapse structure and activity;0.0068619163633637!GO:0042578;phosphoric ester hydrolase activity;0.0068619163633637!GO:0051920;peroxiredoxin activity;0.00714725964619396!GO:0030867;rough endoplasmic reticulum membrane;0.00722465756566728!GO:0000314;organellar small ribosomal subunit;0.0073344152961916!GO:0005763;mitochondrial small ribosomal subunit;0.0073344152961916!GO:0030132;clathrin coat of coated pit;0.00787089616253841!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00793145697609298!GO:0019198;transmembrane receptor protein phosphatase activity;0.00793145697609298!GO:0051540;metal cluster binding;0.00825070521981545!GO:0051536;iron-sulfur cluster binding;0.00825070521981545!GO:0048519;negative regulation of biological process;0.00856044647856649!GO:0006818;hydrogen transport;0.00861484263634522!GO:0006695;cholesterol biosynthetic process;0.00865241190195618!GO:0042254;ribosome biogenesis and assembly;0.00923011366212248!GO:0043021;ribonucleoprotein binding;0.00950820515706548!GO:0044448;cell cortex part;0.00982844505218599!GO:0044456;synapse part;0.0100317976889192!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0104033239448005!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0106732861995447!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0106732861995447!GO:0009165;nucleotide biosynthetic process;0.0109493027088715!GO:0030659;cytoplasmic vesicle membrane;0.0109676205199161!GO:0005791;rough endoplasmic reticulum;0.0109676205199161!GO:0050839;cell adhesion molecule binding;0.0111389971870947!GO:0000287;magnesium ion binding;0.0111649660752929!GO:0001578;microtubule bundle formation;0.0111649660752929!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0119803471750736!GO:0043087;regulation of GTPase activity;0.0119803471750736!GO:0005092;GDP-dissociation inhibitor activity;0.0120595565549049!GO:0048666;neuron development;0.0124560024792276!GO:0015992;proton transport;0.0125640548631127!GO:0007017;microtubule-based process;0.0125976865858134!GO:0031109;microtubule polymerization or depolymerization;0.0131500187587475!GO:0004386;helicase activity;0.0131703577597508!GO:0030125;clathrin vesicle coat;0.0133054436444602!GO:0030665;clathrin coated vesicle membrane;0.0133054436444602!GO:0008186;RNA-dependent ATPase activity;0.0133217536948921!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0134966321745546!GO:0008250;oligosaccharyl transferase complex;0.0136814250514792!GO:0004298;threonine endopeptidase activity;0.0138435539710977!GO:0003713;transcription coactivator activity;0.0138641539076137!GO:0030137;COPI-coated vesicle;0.0138641539076137!GO:0004683;calmodulin-dependent protein kinase activity;0.0139211259554295!GO:0005762;mitochondrial large ribosomal subunit;0.0143274445964731!GO:0000315;organellar large ribosomal subunit;0.0143274445964731!GO:0000904;cellular morphogenesis during differentiation;0.0143526253403826!GO:0046489;phosphoinositide biosynthetic process;0.0147827250296225!GO:0019887;protein kinase regulator activity;0.0152905967299343!GO:0006607;NLS-bearing substrate import into nucleus;0.015694213713693!GO:0005099;Ras GTPase activator activity;0.0163978124199662!GO:0048667;neuron morphogenesis during differentiation;0.0165859454721905!GO:0048812;neurite morphogenesis;0.0165859454721905!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.016773984989009!GO:0043681;protein import into mitochondrion;0.0167911897191628!GO:0035258;steroid hormone receptor binding;0.0169092822791282!GO:0030742;GTP-dependent protein binding;0.0176374189836659!GO:0048500;signal recognition particle;0.0180036439040763!GO:0030258;lipid modification;0.0180336416777943!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0187117484123465!GO:0006672;ceramide metabolic process;0.018813940130245!GO:0019894;kinesin binding;0.0189021006242247!GO:0030041;actin filament polymerization;0.019229011110306!GO:0035035;histone acetyltransferase binding;0.0193421393050388!GO:0043025;cell soma;0.0200695087590075!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0205449319984637!GO:0019904;protein domain specific binding;0.0205579146457251!GO:0030030;cell projection organization and biogenesis;0.0213380053434925!GO:0048858;cell projection morphogenesis;0.0213380053434925!GO:0032990;cell part morphogenesis;0.0213380053434925!GO:0031175;neurite development;0.0214928902881615!GO:0046519;sphingoid metabolic process;0.0215725840627653!GO:0031301;integral to organelle membrane;0.0219018750119476!GO:0008139;nuclear localization sequence binding;0.0219018750119476!GO:0006595;polyamine metabolic process;0.022852681485801!GO:0033673;negative regulation of kinase activity;0.023195831015909!GO:0006469;negative regulation of protein kinase activity;0.023195831015909!GO:0046930;pore complex;0.023227846271154!GO:0008180;signalosome;0.0232479360434878!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0232510968489017!GO:0030119;AP-type membrane coat adaptor complex;0.0232660520540311!GO:0031124;mRNA 3'-end processing;0.0242625047230142!GO:0043407;negative regulation of MAP kinase activity;0.0246118522369324!GO:0007005;mitochondrion organization and biogenesis;0.0252918281833589!GO:0007034;vacuolar transport;0.0262064183315063!GO:0006916;anti-apoptosis;0.0263005694068191!GO:0030131;clathrin adaptor complex;0.0265357907397663!GO:0051287;NAD binding;0.0265789839681685!GO:0005885;Arp2/3 protein complex;0.0270456706289624!GO:0006661;phosphatidylinositol biosynthetic process;0.0270976328318806!GO:0005868;cytoplasmic dynein complex;0.0274145212485054!GO:0006402;mRNA catabolic process;0.0275679139412254!GO:0042552;myelination;0.0275679139412254!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0276792331667082!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0276792331667082!GO:0015002;heme-copper terminal oxidase activity;0.0276792331667082!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0276792331667082!GO:0004129;cytochrome-c oxidase activity;0.0276792331667082!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0276792331667082!GO:0051539;4 iron, 4 sulfur cluster binding;0.0277022199840581!GO:0042995;cell projection;0.0295591040499139!GO:0006399;tRNA metabolic process;0.0296354047472651!GO:0004004;ATP-dependent RNA helicase activity;0.0301713424786186!GO:0000062;acyl-CoA binding;0.0301846018921645!GO:0006887;exocytosis;0.0302076242835916!GO:0031371;ubiquitin conjugating enzyme complex;0.0306805944637855!GO:0007611;learning and/or memory;0.0306805944637855!GO:0043284;biopolymer biosynthetic process;0.0308691254963789!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0311411849926294!GO:0019207;kinase regulator activity;0.0314890448383952!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0314890448383952!GO:0045296;cadherin binding;0.0318270379422518!GO:0006259;DNA metabolic process;0.0321605924832!GO:0008286;insulin receptor signaling pathway;0.0324935743970788!GO:0042670;retinal cone cell differentiation;0.0327519167018768!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0327519167018768!GO:0046549;retinal cone cell development;0.0327519167018768!GO:0008088;axon cargo transport;0.0332751478696404!GO:0001726;ruffle;0.0333209162867505!GO:0006611;protein export from nucleus;0.0341878739546647!GO:0019911;structural constituent of myelin sheath;0.0343541395993257!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0345386093313897!GO:0016079;synaptic vesicle exocytosis;0.0351092001148613!GO:0051348;negative regulation of transferase activity;0.035145528559021!GO:0004680;casein kinase activity;0.0351496925657378!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0351765472845422!GO:0000096;sulfur amino acid metabolic process;0.0358276488980078!GO:0050435;beta-amyloid metabolic process;0.0363680025970808!GO:0016579;protein deubiquitination;0.0363964367502484!GO:0006091;generation of precursor metabolites and energy;0.0375707049078905!GO:0006364;rRNA processing;0.0375707049078905!GO:0033116;ER-Golgi intermediate compartment membrane;0.0380719061008783!GO:0046839;phospholipid dephosphorylation;0.0383474650380931!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.038367688705419!GO:0006333;chromatin assembly or disassembly;0.0384182242294262!GO:0008526;phosphatidylinositol transporter activity;0.0387181255947027!GO:0004576;oligosaccharyl transferase activity;0.0387181255947027!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0389118597186891!GO:0045047;protein targeting to ER;0.0389118597186891!GO:0030176;integral to endoplasmic reticulum membrane;0.0389990718610515!GO:0000059;protein import into nucleus, docking;0.039154377927246!GO:0001725;stress fiber;0.0395286744508213!GO:0032432;actin filament bundle;0.0395286744508213!GO:0051726;regulation of cell cycle;0.0397288663987848!GO:0000209;protein polyubiquitination;0.0402300384279694!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0403898865017464!GO:0006366;transcription from RNA polymerase II promoter;0.0404059746302474!GO:0007033;vacuole organization and biogenesis;0.0414760346066929!GO:0009892;negative regulation of metabolic process;0.0417270766724053!GO:0030911;TPR domain binding;0.0417270766724053!GO:0035023;regulation of Rho protein signal transduction;0.0425035020201079!GO:0006376;mRNA splice site selection;0.0439807741325664!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0439807741325664!GO:0033130;acetylcholine receptor binding;0.0440091623227614!GO:0009066;aspartate family amino acid metabolic process;0.0442237651115097!GO:0051252;regulation of RNA metabolic process;0.0443773344052623!GO:0007006;mitochondrial membrane organization and biogenesis;0.0444881332970418!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0464254623041846!GO:0033043;regulation of organelle organization and biogenesis;0.0464254623041846!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0466831749588937!GO:0030641;cellular hydrogen ion homeostasis;0.0467435867919349!GO:0048499;synaptic vesicle membrane organization and biogenesis;0.0467435867919349!GO:0030285;integral to synaptic vesicle membrane;0.0467435867919349!GO:0030880;RNA polymerase complex;0.046782145550956!GO:0048168;regulation of neuronal synaptic plasticity;0.0476425495801509!GO:0005952;cAMP-dependent protein kinase complex;0.0476447298885688!GO:0043488;regulation of mRNA stability;0.0476858765118435!GO:0043487;regulation of RNA stability;0.0476858765118435!GO:0005813;centrosome;0.0487314822859813!GO:0007041;lysosomal transport;0.0487520994166404!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0487520994166404!GO:0044262;cellular carbohydrate metabolic process;0.0488444108832193!GO:0030663;COPI coated vesicle membrane;0.0496820156514753!GO:0030126;COPI vesicle coat;0.0496820156514753!GO:0000188;inactivation of MAPK activity;0.0496890274437533!GO:0043254;regulation of protein complex assembly;0.0498828093580871 | |||
|sample_id=10032 | |sample_id=10032 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=postcentral gyrus | |sample_tissue=postcentral gyrus | ||
|top_motifs=REST:4.77298228866;NHLH1,2:4.30462972814;EGR1..3:3.93720889503;ZBTB6:3.64832739713;ZFP161:3.63197649213;AHR_ARNT_ARNT2:3.5998398497;MYFfamily:3.57362008041;PRRX1,2:3.54216225989;MTE{core}:3.51012993879;MED-1{core}:3.41271106431;TFAP2B:3.3770400854;MTF1:3.32753056724;PAX5:3.30110912844;ATF2:3.22654947328;HIC1:3.04436478467;GTF2I:2.90557735729;RREB1:2.88266041266;CUX2:2.77609673099;SMAD1..7,9:2.71866284539;RFX1:2.70915403158;FOXM1:2.70201062794;SOX5:2.5470752042;JUN:2.53479475007;BREu{core}:2.49919674755;LMO2:2.48302852887;DBP:2.40760434494;MZF1:2.3996103765;SOX{8,9,10}:2.33090385085;PATZ1:2.27263897183;SOX2:2.24946509605;PRDM1:2.1329449321;MAZ:2.1040443167;GFI1B:2.09801911224;TGIF1:2.03805152519;OCT4_SOX2{dimer}:2.01898992499;NKX2-3_NKX2-5:1.95743410859;EBF1:1.95681698197;POU6F1:1.94942437116;SOX17:1.9441363673;TFDP1:1.89943688249;GCM1,2:1.89545831032;ESRRA:1.89163579476;NKX3-2:1.8536811041;NFIX:1.81407563351;LEF1_TCF7_TCF7L1,2:1.74798816651;NANOG:1.71289607441;MAFB:1.70551086802;POU5F1:1.65876198292;PAX6:1.62953297674;GTF2A1,2:1.60709124211;HOXA9_MEIS1:1.60679247601;NRF1:1.55289219264;MYOD1:1.53090317007;RFX2..5_RFXANK_RFXAP:1.48312849626;ZNF238:1.47606693582;XBP1:1.46750979937;NFIL3:1.46407881181;ZNF423:1.4150150625;KLF4:1.39386287438;RORA:1.36457674403;POU3F1..4:1.36142718858;ARID5B:1.35382388865;EP300:1.35158962237;FOXQ1:1.2840941499;HOX{A4,D4}:1.24166520517;TFAP2{A,C}:1.23615758085;HAND1,2:1.22443204481;SP1:1.10347912616;HMGA1,2:1.090131856;GATA4:1.07308771577;CDC5L:1.07307991111;RBPJ:1.06815206806;FOX{F1,F2,J1}:1.06399678974;SREBF1,2:1.0545990175;MEF2{A,B,C,D}:0.970064002782;ZEB1:0.91482175438;ZNF143:0.848202851044;YY1:0.736457227203;CRX:0.731690789462;T:0.709485150472;CREB1:0.704393552759;HBP1_HMGB_SSRP1_UBTF:0.66090933053;HMX1:0.658004296292;SPZ1:0.62846538366;ADNP_IRX_SIX_ZHX:0.610399297843;TLX1..3_NFIC{dimer}:0.599612093046;TBX4,5:0.522303331449;XCPE1{core}:0.475915482513;GZF1:0.447232523478;HOX{A6,A7,B6,B7}:0.40101512938;STAT1,3:0.392659044912;FOXP1:0.392024037068;ATF4:0.385784257741;bHLH_family:0.369906002982;ZIC1..3:0.341210512588;TLX2:0.324486173528;ZNF384:0.322169156281;GFI1:0.303929863272;ATF5_CREB3:0.276895933031;FOX{D1,D2}:0.255734369182;FOXN1:0.248750912333;FOXP3:0.232441285755;ONECUT1,2:0.228266925283;AR:0.227962384809;PBX1:0.217532185604;NR5A1,2:0.202972849996;PAX2:0.167949494943;VSX1,2:0.129278434394;MYBL2:0.0951802879742;NFY{A,B,C}:0.030207771828;NFE2L2:0.00842821111314;PAX3,7:0.000185735713765;BPTF:-0.00413943598999;TFAP4:-0.00479684544094;IKZF1:-0.00913058749277;NR3C1:-0.0168219345268;PAX1,9:-0.019524472969;ZNF148:-0.0621103191152;SNAI1..3:-0.0948053490649;TOPORS:-0.113048037941;NR1H4:-0.139794672177;NANOG{mouse}:-0.140735566603;NFE2L1:-0.162957971075;LHX3,4:-0.165968656375;NKX6-1,2:-0.189835877155;IKZF2:-0.22516383126;PAX4:-0.246972640174;FOXL1:-0.248312673397;ESR1:-0.284139950928;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.30561065057;ALX1:-0.323169499585;TFCP2:-0.325624927517;NFE2:-0.373859822995;TEF:-0.388347997745;IRF7:-0.402439881679;PDX1:-0.416063931275;UFEwm:-0.432582666083;POU1F1:-0.439711196177;FOX{I1,J2}:-0.529626748986;SPI1:-0.534989311434;NFATC1..3:-0.567495274901;FOXA2:-0.584670244636;CEBPA,B_DDIT3:-0.619077664367;PAX8:-0.665244692617;GATA6:-0.666888222354;IRF1,2:-0.670580701716;TAL1_TCF{3,4,12}:-0.69070060248;GLI1..3:-0.704001632286;STAT2,4,6:-0.717084647368;TP53:-0.72453450131;ATF6:-0.743845420458;HNF1A:-0.755445304229;FOSL2:-0.763545293164;ETS1,2:-0.763983867398;FOXD3:-0.766408516353;SPIB:-0.817198050289;RXR{A,B,G}:-0.854505930925;PPARG:-0.89264226464;BACH2:-0.895775989365;FOS_FOS{B,L1}_JUN{B,D}:-0.909058581901;DMAP1_NCOR{1,2}_SMARC:-0.951345206009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.969087428795;HNF4A_NR2F1,2:-0.973647218984;FOXO1,3,4:-0.985711787321;HSF1,2:-1.00843906091;TEAD1:-1.01658505281;RUNX1..3:-1.09787150894;TBP:-1.10769980418;ELK1,4_GABP{A,B1}:-1.11312590809;SRF:-1.16467200518;NFKB1_REL_RELA:-1.18470084149;HLF:-1.26395099265;HES1:-1.26449805169;E2F1..5:-1.30725261173;POU2F1..3:-1.34571372598;HIF1A:-1.35593892325;RXRA_VDR{dimer}:-1.3962325304;EN1,2:-1.44015126655;ALX4:-1.4792235415;NKX2-2,8:-1.51696301193;MYB:-1.59124169371;STAT5{A,B}:-1.59661085745;PITX1..3:-1.68145032075;ELF1,2,4:-1.80821187129;NKX3-1:-1.9180054832;EVI1:-1.95129094991;ZBTB16:-2.22045841439;HOX{A5,B5}:-2.25679118085;NKX2-1,4:-2.27707149899;CDX1,2,4:-2.59040866679;AIRE:-2.71688734095;NR6A1:-2.92438742515 | |top_motifs=REST:4.77298228866;NHLH1,2:4.30462972814;EGR1..3:3.93720889503;ZBTB6:3.64832739713;ZFP161:3.63197649213;AHR_ARNT_ARNT2:3.5998398497;MYFfamily:3.57362008041;PRRX1,2:3.54216225989;MTE{core}:3.51012993879;MED-1{core}:3.41271106431;TFAP2B:3.3770400854;MTF1:3.32753056724;PAX5:3.30110912844;ATF2:3.22654947328;HIC1:3.04436478467;GTF2I:2.90557735729;RREB1:2.88266041266;CUX2:2.77609673099;SMAD1..7,9:2.71866284539;RFX1:2.70915403158;FOXM1:2.70201062794;SOX5:2.5470752042;JUN:2.53479475007;BREu{core}:2.49919674755;LMO2:2.48302852887;DBP:2.40760434494;MZF1:2.3996103765;SOX{8,9,10}:2.33090385085;PATZ1:2.27263897183;SOX2:2.24946509605;PRDM1:2.1329449321;MAZ:2.1040443167;GFI1B:2.09801911224;TGIF1:2.03805152519;OCT4_SOX2{dimer}:2.01898992499;NKX2-3_NKX2-5:1.95743410859;EBF1:1.95681698197;POU6F1:1.94942437116;SOX17:1.9441363673;TFDP1:1.89943688249;GCM1,2:1.89545831032;ESRRA:1.89163579476;NKX3-2:1.8536811041;NFIX:1.81407563351;LEF1_TCF7_TCF7L1,2:1.74798816651;NANOG:1.71289607441;MAFB:1.70551086802;POU5F1:1.65876198292;PAX6:1.62953297674;GTF2A1,2:1.60709124211;HOXA9_MEIS1:1.60679247601;NRF1:1.55289219264;MYOD1:1.53090317007;RFX2..5_RFXANK_RFXAP:1.48312849626;ZNF238:1.47606693582;XBP1:1.46750979937;NFIL3:1.46407881181;ZNF423:1.4150150625;KLF4:1.39386287438;RORA:1.36457674403;POU3F1..4:1.36142718858;ARID5B:1.35382388865;EP300:1.35158962237;FOXQ1:1.2840941499;HOX{A4,D4}:1.24166520517;TFAP2{A,C}:1.23615758085;HAND1,2:1.22443204481;SP1:1.10347912616;HMGA1,2:1.090131856;GATA4:1.07308771577;CDC5L:1.07307991111;RBPJ:1.06815206806;FOX{F1,F2,J1}:1.06399678974;SREBF1,2:1.0545990175;MEF2{A,B,C,D}:0.970064002782;ZEB1:0.91482175438;ZNF143:0.848202851044;YY1:0.736457227203;CRX:0.731690789462;T:0.709485150472;CREB1:0.704393552759;HBP1_HMGB_SSRP1_UBTF:0.66090933053;HMX1:0.658004296292;SPZ1:0.62846538366;ADNP_IRX_SIX_ZHX:0.610399297843;TLX1..3_NFIC{dimer}:0.599612093046;TBX4,5:0.522303331449;XCPE1{core}:0.475915482513;GZF1:0.447232523478;HOX{A6,A7,B6,B7}:0.40101512938;STAT1,3:0.392659044912;FOXP1:0.392024037068;ATF4:0.385784257741;bHLH_family:0.369906002982;ZIC1..3:0.341210512588;TLX2:0.324486173528;ZNF384:0.322169156281;GFI1:0.303929863272;ATF5_CREB3:0.276895933031;FOX{D1,D2}:0.255734369182;FOXN1:0.248750912333;FOXP3:0.232441285755;ONECUT1,2:0.228266925283;AR:0.227962384809;PBX1:0.217532185604;NR5A1,2:0.202972849996;PAX2:0.167949494943;VSX1,2:0.129278434394;MYBL2:0.0951802879742;NFY{A,B,C}:0.030207771828;NFE2L2:0.00842821111314;PAX3,7:0.000185735713765;BPTF:-0.00413943598999;TFAP4:-0.00479684544094;IKZF1:-0.00913058749277;NR3C1:-0.0168219345268;PAX1,9:-0.019524472969;ZNF148:-0.0621103191152;SNAI1..3:-0.0948053490649;TOPORS:-0.113048037941;NR1H4:-0.139794672177;NANOG{mouse}:-0.140735566603;NFE2L1:-0.162957971075;LHX3,4:-0.165968656375;NKX6-1,2:-0.189835877155;IKZF2:-0.22516383126;PAX4:-0.246972640174;FOXL1:-0.248312673397;ESR1:-0.284139950928;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.30561065057;ALX1:-0.323169499585;TFCP2:-0.325624927517;NFE2:-0.373859822995;TEF:-0.388347997745;IRF7:-0.402439881679;PDX1:-0.416063931275;UFEwm:-0.432582666083;POU1F1:-0.439711196177;FOX{I1,J2}:-0.529626748986;SPI1:-0.534989311434;NFATC1..3:-0.567495274901;FOXA2:-0.584670244636;CEBPA,B_DDIT3:-0.619077664367;PAX8:-0.665244692617;GATA6:-0.666888222354;IRF1,2:-0.670580701716;TAL1_TCF{3,4,12}:-0.69070060248;GLI1..3:-0.704001632286;STAT2,4,6:-0.717084647368;TP53:-0.72453450131;ATF6:-0.743845420458;HNF1A:-0.755445304229;FOSL2:-0.763545293164;ETS1,2:-0.763983867398;FOXD3:-0.766408516353;SPIB:-0.817198050289;RXR{A,B,G}:-0.854505930925;PPARG:-0.89264226464;BACH2:-0.895775989365;FOS_FOS{B,L1}_JUN{B,D}:-0.909058581901;DMAP1_NCOR{1,2}_SMARC:-0.951345206009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.969087428795;HNF4A_NR2F1,2:-0.973647218984;FOXO1,3,4:-0.985711787321;HSF1,2:-1.00843906091;TEAD1:-1.01658505281;RUNX1..3:-1.09787150894;TBP:-1.10769980418;ELK1,4_GABP{A,B1}:-1.11312590809;SRF:-1.16467200518;NFKB1_REL_RELA:-1.18470084149;HLF:-1.26395099265;HES1:-1.26449805169;E2F1..5:-1.30725261173;POU2F1..3:-1.34571372598;HIF1A:-1.35593892325;RXRA_VDR{dimer}:-1.3962325304;EN1,2:-1.44015126655;ALX4:-1.4792235415;NKX2-2,8:-1.51696301193;MYB:-1.59124169371;STAT5{A,B}:-1.59661085745;PITX1..3:-1.68145032075;ELF1,2,4:-1.80821187129;NKX3-1:-1.9180054832;EVI1:-1.95129094991;ZBTB16:-2.22045841439;HOX{A5,B5}:-2.25679118085;NKX2-1,4:-2.27707149899;CDX1,2,4:-2.59040866679;AIRE:-2.71688734095;NR6A1:-2.92438742515 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10032-101E5;search_select_hide=table117:FF:10032-101E5 | |||
}} | }} | ||
Latest revision as of 12:15, 3 June 2020
| Name: | postcentral gyrus, adult, pool1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10638 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10638
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10638
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.033 |
| 10 | 10 | 0.0217 |
| 100 | 100 | 0.297 |
| 101 | 101 | 0.924 |
| 102 | 102 | 0.701 |
| 103 | 103 | 0.178 |
| 104 | 104 | 0.17 |
| 105 | 105 | 0.338 |
| 106 | 106 | 0.0712 |
| 107 | 107 | 0.127 |
| 108 | 108 | 0.889 |
| 109 | 109 | 0.0102 |
| 11 | 11 | 0.016 |
| 110 | 110 | 0.0355 |
| 111 | 111 | 0.0609 |
| 112 | 112 | 0.328 |
| 113 | 113 | 0.675 |
| 114 | 114 | 0.0721 |
| 115 | 115 | 0.971 |
| 116 | 116 | 0.217 |
| 117 | 117 | 0.0079 |
| 118 | 118 | 0.0873 |
| 119 | 119 | 0.111 |
| 12 | 12 | 0.795 |
| 120 | 120 | 0.141 |
| 121 | 121 | 0.662 |
| 122 | 122 | 0.551 |
| 123 | 123 | 0.785 |
| 124 | 124 | 0.0252 |
| 125 | 125 | 0.156 |
| 126 | 126 | 0.0221 |
| 127 | 127 | 0.484 |
| 128 | 128 | 0.18 |
| 129 | 129 | 0.628 |
| 13 | 13 | 7.57082e-4 |
| 130 | 130 | 0.474 |
| 131 | 131 | 0.0774 |
| 132 | 132 | 0.697 |
| 133 | 133 | 0.00139 |
| 134 | 134 | 0.258 |
| 135 | 135 | 0.135 |
| 136 | 136 | 0.00964 |
| 137 | 137 | 0.708 |
| 138 | 138 | 0.791 |
| 139 | 139 | 0.0849 |
| 14 | 14 | 0.937 |
| 140 | 140 | 0.118 |
| 141 | 141 | 0.23 |
| 142 | 142 | 0.945 |
| 143 | 143 | 0.0104 |
| 144 | 144 | 0.848 |
| 145 | 145 | 0.102 |
| 146 | 146 | 0.649 |
| 147 | 147 | 0.939 |
| 148 | 148 | 0.151 |
| 149 | 149 | 0.376 |
| 15 | 15 | 0.0658 |
| 150 | 150 | 0.162 |
| 151 | 151 | 0.706 |
| 152 | 152 | 0.156 |
| 153 | 153 | 0.63 |
| 154 | 154 | 0.585 |
| 155 | 155 | 0.357 |
| 156 | 156 | 0.44 |
| 157 | 157 | 0.355 |
| 158 | 158 | 0.877 |
| 159 | 159 | 0.139 |
| 16 | 16 | 0.0752 |
| 160 | 160 | 0.222 |
| 161 | 161 | 0.163 |
| 162 | 162 | 0.882 |
| 163 | 163 | 0.737 |
| 164 | 164 | 0.0159 |
| 165 | 165 | 0.0205 |
| 166 | 166 | 0.811 |
| 167 | 167 | 0.266 |
| 168 | 168 | 0.692 |
| 169 | 169 | 0.00764 |
| 17 | 17 | 0.187 |
| 18 | 18 | 0.214 |
| 19 | 19 | 0.217 |
| 2 | 2 | 0.933 |
| 20 | 20 | 0.0729 |
| 21 | 21 | 0.0873 |
| 22 | 22 | 0.263 |
| 23 | 23 | 0.429 |
| 24 | 24 | 0.11 |
| 25 | 25 | 0.443 |
| 26 | 26 | 4.21253e-5 |
| 27 | 27 | 0.957 |
| 28 | 28 | 0.603 |
| 29 | 29 | 0.00821 |
| 3 | 3 | 0.0228 |
| 30 | 30 | 0.532 |
| 31 | 31 | 0.95 |
| 32 | 32 | 0.035 |
| 33 | 33 | 0.0684 |
| 34 | 34 | 0.859 |
| 35 | 35 | 0.52 |
| 36 | 36 | 0.1 |
| 37 | 37 | 0.0421 |
| 38 | 38 | 0.327 |
| 39 | 39 | 0.261 |
| 4 | 4 | 0.986 |
| 40 | 40 | 0.0664 |
| 41 | 41 | 0.464 |
| 42 | 42 | 0.152 |
| 43 | 43 | 0.105 |
| 44 | 44 | 0.0855 |
| 45 | 45 | 0.855 |
| 46 | 46 | 0.0487 |
| 47 | 47 | 0.0644 |
| 48 | 48 | 0.0583 |
| 49 | 49 | 0.138 |
| 5 | 5 | 0.431 |
| 50 | 50 | 0.36 |
| 51 | 51 | 0.561 |
| 52 | 52 | 0.653 |
| 53 | 53 | 0.891 |
| 54 | 54 | 0.515 |
| 55 | 55 | 0.3 |
| 56 | 56 | 0.502 |
| 57 | 57 | 0.246 |
| 58 | 58 | 0.281 |
| 59 | 59 | 0.172 |
| 6 | 6 | 0.58 |
| 60 | 60 | 0.0745 |
| 61 | 61 | 0.0561 |
| 62 | 62 | 0.158 |
| 63 | 63 | 0.177 |
| 64 | 64 | 0.231 |
| 65 | 65 | 0.323 |
| 66 | 66 | 0.277 |
| 67 | 67 | 0.358 |
| 68 | 68 | 0.36 |
| 69 | 69 | 0.479 |
| 7 | 7 | 0.0501 |
| 70 | 70 | 0.0228 |
| 71 | 71 | 0.00724 |
| 72 | 72 | 0.486 |
| 73 | 73 | 0.047 |
| 74 | 74 | 0.487 |
| 75 | 75 | 0.0272 |
| 76 | 76 | 0.333 |
| 77 | 77 | 0.29 |
| 78 | 78 | 0.00224 |
| 79 | 79 | 0.171 |
| 8 | 8 | 0.0562 |
| 80 | 80 | 0.939 |
| 81 | 81 | 0.59 |
| 82 | 82 | 0.486 |
| 83 | 83 | 0.188 |
| 84 | 84 | 0.694 |
| 85 | 85 | 0.309 |
| 86 | 86 | 0.197 |
| 87 | 87 | 0.0125 |
| 88 | 88 | 0.841 |
| 89 | 89 | 0.613 |
| 9 | 9 | 0.548 |
| 90 | 90 | 0.0345 |
| 91 | 91 | 0.348 |
| 92 | 92 | 0.44 |
| 93 | 93 | 0.791 |
| 94 | 94 | 0.0652 |
| 95 | 95 | 0.0272 |
| 96 | 96 | 0.948 |
| 97 | 97 | 0.761 |
| 98 | 98 | 0.224 |
| 99 | 99 | 0.94 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10638
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0002581 (postcentral gyrus)
0001872 (parietal lobe)
0000200 (gyrus)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010032 (human postcentral gyrus - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
