FF:10073-102A1: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00005049 | ||
|accession_numbers=CAGE;DRX008693;DRR009565;DRZ000990;DRZ002375 | |accession_numbers=CAGE;DRX008693;DRR009565;DRZ000990;DRZ002375;DRZ012340;DRZ013725 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000955,UBERON:0002021,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000955,UBERON:0002021,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:5832508..5832524,+!p1@SOX11!2.71!515.23!SOX11;;chr7:31380292..31380351,-!p1@NEUROD6!2.52!327.95!NEUROD6;;chr17:37764128..37764258,-!p1@NEUROD2!2.49!305.51!NEUROD2;;chrX:25034067..25034088,-!p1@ARX!2.46!287.11!ARX;;chr14:29235961..29236008,+!p1@FOXG1!2.45!279.30!FOXG1;;chr2:2334997..2335053,-!p1@MYT1L!2.41!254.34!MYT1L;;chr1:244214577..244214593,+!p1@ZNF238!2.33!210.98!ZNF238;;chr2:5832493..5832507,+!p2@SOX11!2.29!193.84!SOX11;;chr2:162272785..162272836,+!p1@TBR1!2.28!188.30!TBR1;;chr5:88178983..88179012,-!p1@MEF2C!2.25!1287.58!MEF2C;;chr9:77112244..77112262,+!p1@RORB!2.21!181.24!RORB;;chr2:200322229..200322251,-!p3@SATB2!2.16!143.93!SATB2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.14!136.12!POU3F3;;chr4:113437332..113437337,-!p1@NEUROG2!2.11!129.31!NEUROG2;;chr2:145277882..145277967,-!p3@ZEB2!2.05!188.55!ZEB2;;chr4:81118647..81118666,+!p1@PRDM8!2.03!138.89!PRDM8;;chr8:65492756..65492768,+!p2@BHLHE22!2.03!107.13!BHLHE22;;chr14:29234581..29234601,+!p2@FOXG1!2.02!103.60!FOXG1;;chr9:126773880..126773895,+!p2@LHX2!2.00!99.32!LHX2;;chr8:93107451..93107468,-!p2@RUNX1T1!1.92!82.18!RUNX1T1;;chr21:34442439..34442455,+!p1@OLIG1!1.91!81.17!OLIG1;;chr2:200322723..200322739,-!p6@SATB2!1.88!75.12!SATB2;;chr2:2335109..2335134,-!p2@MYT1L!1.88!74.36!MYT1L;;chr2:162272889..162272915,+!p2@TBR1!1.87!73.60!TBR1;;chr1:151032922..151032951,+!p2@MLLT11!1.86!114.69!MLLT11;;chr5:88179271..88179286,-!p7@MEF2C!1.86!71.84!MEF2C;;chr19:38720294..38720348,-!p1@DPF1!1.84!84.44!DPF1;;chr8:93115274..93115323,-!p4@RUNX1T1!1.84!68.82!RUNX1T1;;chr9:126774018..126774055,+!p1@LHX2!1.81!64.03!LHX2;;chr5:88179017..88179046,-!p2@MEF2C!1.79!229.89!MEF2C;;chr19:13135582..13135600,+!p3@NFIX!1.77!57.47!NFIX;;chr2:200320768..200320800,-!p4@SATB2!1.77!57.22!SATB2;;chr12:103351444..103351461,+!p1@ASCL1!1.76!56.21!ASCL1;;chr2:16080659..16080685,+!p1@MYCN!1.72!51.93!MYCN;;chr1:2461692..2461710,-!p1@HES5!1.71!50.41!HES5;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.71!50.16!POU3F3;;chr3:181429704..181429722,+!p1@SOX2!1.71!49.91!SOX2;;chr1:244219775..244219893,+!p2@ZNF238!1.69!64.53!ZNF238;;chr18:53070846..53070902,-!p6@TCF4!1.69!48.40!TCF4;;chr2:200322259..200322280,-!p5@SATB2!1.69!47.89!SATB2;;chr8:93107696..93107716,-!p8@RUNX1T1!1.69!47.64!RUNX1T1;;chr14:29236269..29236285,+!p3@FOXG1!1.66!44.62!FOXG1;;chr15:37392724..37392757,-!p1@MEIS2!1.65!193.34!MEIS2;;chr19:13134772..13134822,+!p2@NFIX!1.65!63.52!NFIX;;chr12:24102576..24102623,-!p2@SOX5!1.65!43.61!SOX5;;chr2:172967621..172967637,-!p1@DLX2!1.64!111.42!DLX2;;chr2:200325204..200325243,-!p7@SATB2!1.64!43.10!SATB2;;chr2:166428839..166428859,+!p2@CSRNP3!1.64!42.85!CSRNP3;;chr20:20348740..20348757,+!p1@INSM1!1.64!42.35!INSM1;;chr5:88179230..88179270,-!p4@MEF2C!1.63!78.65!MEF2C;;chrX:84498989..84499003,+!p1@ZNF711!1.63!56.46!ZNF711;;chr7:96654133..96654150,-!p1@DLX5!1.63!41.34!DLX5;;chr14:33403881..33403924,+!p1@NPAS3!1.62!40.58!NPAS3;;chr2:145277640..145277771,-!p1@ZEB2!1.61!500.87!ZEB2;;chr9:20621834..20621884,-!p5@MLLT3!1.60!39.07!MLLT3;;chr21:34398234..34398250,+!p1@OLIG2!1.59!38.31!OLIG2;;chr2:162272716..162272753,+!p3@TBR1!1.59!37.81!TBR1;;chr3:24536253..24536328,-!p1@THRB!1.58!68.31!THRB;;chr9:20621927..20621996,-!p3@MLLT3!1.58!61.00!MLLT3;;chr5:88179195..88179224,-!p3@MEF2C!1.58!57.22!MEF2C;;chr6:21593973..21593988,+!p1@SOX4!1.57!1224.82!SOX4;;chr2:172950227..172950249,+!p2@DLX1!1.57!36.30!DLX1;;chr2:239148671..239148686,-!p1@HES6!1.56!123.52!HES6;;chr2:166326200..166326216,+!p1@CSRNP3!1.56!51.42!CSRNP3;;chrX:82763292..82763317,+!p1@POU3F4!1.56!35.29!POU3F4;;chr8:93074803..93074845,-!p1@RUNX1T1!1.56!35.04!RUNX1T1;;chr15:80696703..80696754,+!p1@ARNT2!1.55!45.12!ARNT2;;chr1:244214611..244214624,+!p4@ZNF238!1.54!33.53!ZNF238;;chr2:200213794..200213807,-!p9@SATB2!1.54!33.53!SATB2;;chr1:151032860..151032918,+!p1@MLLT11!1.53!370.80!MLLT11;;chr2:172949484..172949522,+!p1@DLX1!1.52!31.76!DLX1;;chr18:42260059..42260132,+!p1@SETBP1!1.51!51.42!SETBP1;;chr2:60780753..60780800,-!p1@BCL11A!1.50!144.69!BCL11A;;chr14:29236301..29236317,+!p5@FOXG1!1.50!30.75!FOXG1;;chr9:14314131..14314147,-!p2@NFIB!1.48!156.03!NFIB;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.48!28.99!PEG3;;chr1:164528616..164528660,+!p5@PBX1!1.47!57.47!PBX1;;chr11:8102846..8102892,+!p1@TUB!1.47!39.07!TUB;;chr2:2335070..2335098,-!p4@MYT1L!1.47!28.74!MYT1L;;chr6:21597514..21597578,+!p4@SOX4!1.46!46.63!SOX4;;chr12:24715376..24715432,-!p1@SOX5!1.46!35.04!SOX5;;chr12:111471526..111471541,+!p1@CUX2!1.46!27.73!CUX2;;chr1:214161272..214161322,+!p1@PROX1!1.45!38.31!PROX1;;chr6:21594252..21594285,+!p11@SOX4!1.44!29.24!SOX4;;chr8:93115445..93115462,-!p7@RUNX1T1!1.44!26.47!RUNX1T1;;chr2:200323414..200323455,-!p1@SATB2!1.43!54.20!SATB2;;chr6:91006575..91006602,-!p2@BACH2!1.43!37.81!BACH2;;chr5:92919375..92919438,+!p6@NR2F1!1.43!28.23!NR2F1;;chr1:164528410..164528428,+!p1@PBX1!1.42!184.52!PBX1;;chr2:200322654..200322707,-!p2@SATB2!1.42!36.55!SATB2;;chr19:13135731..13135787,+!p10@NFIX!1.42!25.46!NFIX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| |expression_enrichment_score=chr2:5832508..5832524,+!p1@SOX11!2.71!515.23!SOX11;;chr7:31380292..31380351,-!p1@NEUROD6!2.52!327.95!NEUROD6;;chr17:37764128..37764258,-!p1@NEUROD2!2.49!305.51!NEUROD2;;chrX:25034067..25034088,-!p1@ARX!2.46!287.11!ARX;;chr14:29235961..29236008,+!p1@FOXG1!2.45!279.30!FOXG1;;chr2:2334997..2335053,-!p1@MYT1L!2.41!254.34!MYT1L;;chr1:244214577..244214593,+!p1@ZNF238!2.33!210.98!ZNF238;;chr2:5832493..5832507,+!p2@SOX11!2.29!193.84!SOX11;;chr2:162272785..162272836,+!p1@TBR1!2.28!188.30!TBR1;;chr5:88178983..88179012,-!p1@MEF2C!2.25!1287.58!MEF2C;;chr9:77112244..77112262,+!p1@RORB!2.21!181.24!RORB;;chr2:200322229..200322251,-!p3@SATB2!2.16!143.93!SATB2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.14!136.12!POU3F3;;chr4:113437332..113437337,-!p1@NEUROG2!2.11!129.31!NEUROG2;;chr2:145277882..145277967,-!p3@ZEB2!2.05!188.55!ZEB2;;chr4:81118647..81118666,+!p1@PRDM8!2.03!138.89!PRDM8;;chr8:65492756..65492768,+!p2@BHLHE22!2.03!107.13!BHLHE22;;chr14:29234581..29234601,+!p2@FOXG1!2.02!103.60!FOXG1;;chr9:126773880..126773895,+!p2@LHX2!2.00!99.32!LHX2;;chr8:93107451..93107468,-!p2@RUNX1T1!1.92!82.18!RUNX1T1;;chr21:34442439..34442455,+!p1@OLIG1!1.91!81.17!OLIG1;;chr2:200322723..200322739,-!p6@SATB2!1.88!75.12!SATB2;;chr2:2335109..2335134,-!p2@MYT1L!1.88!74.36!MYT1L;;chr2:162272889..162272915,+!p2@TBR1!1.87!73.60!TBR1;;chr1:151032922..151032951,+!p2@MLLT11!1.86!114.69!MLLT11;;chr5:88179271..88179286,-!p7@MEF2C!1.86!71.84!MEF2C;;chr19:38720294..38720348,-!p1@DPF1!1.84!84.44!DPF1;;chr8:93115274..93115323,-!p4@RUNX1T1!1.84!68.82!RUNX1T1;;chr9:126774018..126774055,+!p1@LHX2!1.81!64.03!LHX2;;chr5:88179017..88179046,-!p2@MEF2C!1.79!229.89!MEF2C;;chr19:13135582..13135600,+!p3@NFIX!1.77!57.47!NFIX;;chr2:200320768..200320800,-!p4@SATB2!1.77!57.22!SATB2;;chr12:103351444..103351461,+!p1@ASCL1!1.76!56.21!ASCL1;;chr2:16080659..16080685,+!p1@MYCN!1.72!51.93!MYCN;;chr1:2461692..2461710,-!p1@HES5!1.71!50.41!HES5;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.71!50.16!POU3F3;;chr3:181429704..181429722,+!p1@SOX2!1.71!49.91!SOX2;;chr1:244219775..244219893,+!p2@ZNF238!1.69!64.53!ZNF238;;chr18:53070846..53070902,-!p6@TCF4!1.69!48.40!TCF4;;chr2:200322259..200322280,-!p5@SATB2!1.69!47.89!SATB2;;chr8:93107696..93107716,-!p8@RUNX1T1!1.69!47.64!RUNX1T1;;chr14:29236269..29236285,+!p3@FOXG1!1.66!44.62!FOXG1;;chr15:37392724..37392757,-!p1@MEIS2!1.65!193.34!MEIS2;;chr19:13134772..13134822,+!p2@NFIX!1.65!63.52!NFIX;;chr12:24102576..24102623,-!p2@SOX5!1.65!43.61!SOX5;;chr2:172967621..172967637,-!p1@DLX2!1.64!111.42!DLX2;;chr2:200325204..200325243,-!p7@SATB2!1.64!43.10!SATB2;;chr2:166428839..166428859,+!p2@CSRNP3!1.64!42.85!CSRNP3;;chr20:20348740..20348757,+!p1@INSM1!1.64!42.35!INSM1;;chr5:88179230..88179270,-!p4@MEF2C!1.63!78.65!MEF2C;;chrX:84498989..84499003,+!p1@ZNF711!1.63!56.46!ZNF711;;chr7:96654133..96654150,-!p1@DLX5!1.63!41.34!DLX5;;chr14:33403881..33403924,+!p1@NPAS3!1.62!40.58!NPAS3;;chr2:145277640..145277771,-!p1@ZEB2!1.61!500.87!ZEB2;;chr9:20621834..20621884,-!p5@MLLT3!1.60!39.07!MLLT3;;chr21:34398234..34398250,+!p1@OLIG2!1.59!38.31!OLIG2;;chr2:162272716..162272753,+!p3@TBR1!1.59!37.81!TBR1;;chr3:24536253..24536328,-!p1@THRB!1.58!68.31!THRB;;chr9:20621927..20621996,-!p3@MLLT3!1.58!61.00!MLLT3;;chr5:88179195..88179224,-!p3@MEF2C!1.58!57.22!MEF2C;;chr6:21593973..21593988,+!p1@SOX4!1.57!1224.82!SOX4;;chr2:172950227..172950249,+!p2@DLX1!1.57!36.30!DLX1;;chr2:239148671..239148686,-!p1@HES6!1.56!123.52!HES6;;chr2:166326200..166326216,+!p1@CSRNP3!1.56!51.42!CSRNP3;;chrX:82763292..82763317,+!p1@POU3F4!1.56!35.29!POU3F4;;chr8:93074803..93074845,-!p1@RUNX1T1!1.56!35.04!RUNX1T1;;chr15:80696703..80696754,+!p1@ARNT2!1.55!45.12!ARNT2;;chr1:244214611..244214624,+!p4@ZNF238!1.54!33.53!ZNF238;;chr2:200213794..200213807,-!p9@SATB2!1.54!33.53!SATB2;;chr1:151032860..151032918,+!p1@MLLT11!1.53!370.80!MLLT11;;chr2:172949484..172949522,+!p1@DLX1!1.52!31.76!DLX1;;chr18:42260059..42260132,+!p1@SETBP1!1.51!51.42!SETBP1;;chr2:60780753..60780800,-!p1@BCL11A!1.50!144.69!BCL11A;;chr14:29236301..29236317,+!p5@FOXG1!1.50!30.75!FOXG1;;chr9:14314131..14314147,-!p2@NFIB!1.48!156.03!NFIB;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.48!28.99!PEG3;;chr1:164528616..164528660,+!p5@PBX1!1.47!57.47!PBX1;;chr11:8102846..8102892,+!p1@TUB!1.47!39.07!TUB;;chr2:2335070..2335098,-!p4@MYT1L!1.47!28.74!MYT1L;;chr6:21597514..21597578,+!p4@SOX4!1.46!46.63!SOX4;;chr12:24715376..24715432,-!p1@SOX5!1.46!35.04!SOX5;;chr12:111471526..111471541,+!p1@CUX2!1.46!27.73!CUX2;;chr1:214161272..214161322,+!p1@PROX1!1.45!38.31!PROX1;;chr6:21594252..21594285,+!p11@SOX4!1.44!29.24!SOX4;;chr8:93115445..93115462,-!p7@RUNX1T1!1.44!26.47!RUNX1T1;;chr2:200323414..200323455,-!p1@SATB2!1.43!54.20!SATB2;;chr6:91006575..91006602,-!p2@BACH2!1.43!37.81!BACH2;;chr5:92919375..92919438,+!p6@NR2F1!1.43!28.23!NR2F1;;chr1:164528410..164528428,+!p1@PBX1!1.42!184.52!PBX1;;chr2:200322654..200322707,-!p2@SATB2!1.42!36.55!SATB2;;chr19:13135731..13135787,+!p10@NFIX!1.42!25.46!NFIX;;chr2:60781201..60781258,-!p3@BCL11A!1.42!25.21!BCL11A;;chr18:52988979..52988993,-!p18@TCF4!1.41!24.45!TCF4;;chr8:93115332..93115360,-!p11@RUNX1T1!1.41!24.45!RUNX1T1;;chr2:60780607..60780624,-!p2@BCL11A!1.40!71.84!BCL11A;;chr6:91006518..91006570,-!p1@BACH2!1.40!54.95!BACH2;;chr1:61548374..61548415,+!p4@NFIA!1.40!44.11!NFIA;;chr8:60031682..60031710,-!p2@TOX!1.39!37.56!TOX;;chr2:175199675..175199688,+!p1@SP9!1.39!23.69!SP9;;chr18:53254566..53254567,-!p8@TCF4!1.37!36.55!TCF4;;chr3:141105705..141105770,+!p4@ZBTB38!1.37!27.22!ZBTB38;;chr18:53068911..53068935,-!p4@TCF4!1.37!25.21!TCF4;;chr1:38512457..38512474,-!p1@POU3F1!1.37!24.45!POU3F1;;chr2:200322213..200322224,-!p14@SATB2!1.37!22.69!SATB2;;chr2:185463247..185463263,+!p1@ZNF804A!1.36!38.57!ZNF804A;;chr5:92919100..92919135,+!p3@NR2F1!1.36!26.72!NR2F1;;chr2:145275982..145276003,-!p7@ZEB2!1.36!21.93!ZEB2;;chr6:21597600..21597664,+!p3@SOX4!1.35!34.79!SOX4;;chr8:65492520..65492554,+!p3@BHLHE22!1.35!21.43!BHLHE22;;chr11:31832862..31832884,-!p2@PAX6!1.35!21.43!PAX6;;chr2:145277792..145277808,-!p15@ZEB2!1.35!21.17!ZEB2;;chr18:53257027..53257052,-!p3@TCF4!1.34!81.17!TCF4;;chr8:93115362..93115391,-!p9@RUNX1T1!1.34!20.67!RUNX1T1;;chr15:37392616..37392638,-!p2@MEIS2!1.33!63.02!MEIS2;;chr3:114173720..114173794,-!p6@ZBTB20!1.33!20.42!ZBTB20;;chr9:126774058..126774081,+!p3@LHX2!1.33!20.42!LHX2;;chr8:30890810..30890880,-!p1@PURG!1.33!20.17!PURG;;chr14:29236169..29236216,+!p6@FOXG1!1.33!20.17!FOXG1;;chr14:29236510..29236521,+!p9@FOXG1!1.33!20.17!FOXG1;;chrX:84499081..84499115,+!p2@ZNF711!1.32!28.74!ZNF711;;chrY:21906594..21906622,-!p1@KDM5D!1.32!19.91!KDM5D;;chr2:182545234..182545252,-!p1@NEUROD1!1.32!19.91!NEUROD1;;chr18:42260030..42260055,+!p3@SETBP1!1.31!24.20!SETBP1;;chr7:20826504..20826526,-!p1@SP8!1.31!19.41!SP8;;chr20:657284..657307,-!p1@SCRT2!1.31!19.41!SCRT2;;chr19:58220517..58220583,-!p1@ZNF154!1.30!59.74!ZNF154;;chr1:61548069..61548102,+!p3@NFIA!1.30!44.87!NFIA;;chr5:178368186..178368238,+!p1@ZNF454!1.30!34.03!ZNF454;;chr18:53070913..53070933,-!p16@TCF4!1.30!19.16!TCF4;;chr2:200322711..200322722,-!p10@SATB2!1.30!19.16!SATB2;;chr9:124991204..124991246,-!p1@LHX6!1.30!19.16!LHX6;;chr15:37392094..37392116,-!p6@MEIS2!1.29!22.69!MEIS2;;chr16:52581025..52581072,-!p1@TOX3!1.29!18.65!TOX3;;chr6:21594206..21594221,+!p15@SOX4!1.29!18.40!SOX4;;chr8:93074848..93074871,-!p3@RUNX1T1!1.29!18.40!RUNX1T1;;chr8:93107855..93107901,-!p12@RUNX1T1!1.29!18.40!RUNX1T1;;chr11:125034640..125034655,+!p1@PKNOX2!1.29!18.40!PKNOX2;;chr19:38183208..38183225,-!p1@ZNF781!1.28!22.94!ZNF781;;chr2:200325244..200325264,-!p11@SATB2!1.28!18.15!SATB2;;chr9:109625401..109625458,+!p1@ZNF462!1.27!45.88!ZNF462;;chr5:124082322..124082364,-!p1@ZNF608!1.27!44.36!ZNF608;;chr1:164528942..164528964,+!p11@PBX1!1.27!17.65!PBX1;;chr17:7492684..7492778,-!p2@SOX15!1.26!36.30!SOX15;;chr16:79634595..79634620,-!p2@MAF!1.26!31.00!MAF;;chrX:84499056..84499078,+!p3@ZNF711!1.26!17.39!ZNF711;;chr3:33482052..33482116,-!p2@UBP1!1.25!25.96!UBP1;;chr15:37392703..37392717,-!p8@MEIS2!1.25!23.95!MEIS2;;chr1:164528687..164528711,+!p6@PBX1!1.25!19.41!PBX1;;chr9:14308004..14308041,-!p14@NFIB!1.25!16.89!NFIB;;chr14:58798013..58798071,+!p2@ARID4A!1.25!16.89!ARID4A;;chr8:93107726..93107744,-!p21@RUNX1T1!1.25!16.89!RUNX1T1;;chr5:88119715..88119757,-!p11@MEF2C!1.25!16.64!MEF2C;;chr8:93107638..93107649,-!p22@RUNX1T1!1.25!16.64!RUNX1T1;;chr16:79634624..79634642,-!p1@MAF!1.24!63.02!MAF;;chr9:14314106..14314119,-!p5@NFIB!1.24!28.99!NFIB;;chr1:164528445..164528459,+!p2@PBX1!1.23!49.15!PBX1;;chr15:80696666..80696700,+!p4@ARNT2!1.23!16.13!ARNT2;;chr2:166428861..166428883,+!p3@CSRNP3!1.23!16.13!CSRNP3;;chr1:151032957..151032968,+!p7@MLLT11!1.23!15.88!MLLT11;;chr7:113726357..113726443,+!p1@FOXP2!1.22!26.72!FOXP2;;chr18:53257001..53257015,-!p5@TCF4!1.22!26.72!TCF4;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!1.22!15.63!POU3F3;;chr8:106330656..106330684,+!p1@ZFPM2!1.21!39.83!ZFPM2;;chr18:56532100..56532130,+!p1@ZNF532!1.21!27.98!ZNF532;;chr5:92918768..92918783,+!p8@NR2F1!1.21!15.38!NR2F1;;chr10:119302232..119302265,+!p1@EMX2!1.21!15.38!EMX2;;chr18:52988952..52988965,-!p23@TCF4!1.21!15.12!TCF4;;chr9:20622444..20622468,-!p2@MLLT3!1.20!47.39!MLLT3;;chr11:8102819..8102845,+!p3@TUB!1.20!18.40!TUB;;chr15:80733570..80733659,+!p2@ARNT2!1.20!14.87!ARNT2;;chr16:51185172..51185197,-!p1@SALL1!1.20!14.87!SALL1;;chr2:162273241..162273253,+!p4@TBR1!1.20!14.87!TBR1;;chr3:181429741..181429767,+!p2@SOX2!1.20!14.87!SOX2;;chr9:3525910..3525955,-!p4@RFX3!1.19!42.85!RFX3;;chr14:29237009..29237049,+!p4@FOXG1!1.19!14.62!FOXG1;;chr1:42384343..42384380,-!p4@HIVEP3!1.19!14.37!HIVEP3;;chr9:3525867..3525902,-!p3@RFX3!1.18!48.40!RFX3;;chr1:164528975..164528998,+!p13@PBX1!1.18!14.12!PBX1;;chr1:164528384..164528409,+!p3@PBX1!1.17!43.10!PBX1;;chr9:14313893..14313908,-!p7@NFIB!1.17!19.91!NFIB;;chr2:145275947..145275981,-!p10@ZEB2!1.17!13.86!ZEB2;;chr6:99282592..99282616,+!p3@POU3F2!1.17!13.86!POU3F2;;chr3:21792682..21792720,-!p1@ZNF385D!1.16!13.61!ZNF385D;;chrX:139587228.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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002021;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 39: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10073-102A1 | |id=FF:10073-102A1 | ||
|is_a=EFO:0002091;;FF:0010073 | |is_a=EFO:0002091;;FF:0010073 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11784 | |library_id=CNhs11784 | ||
| | |library_id_phase_based=2:CNhs11784 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10073 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10073 | |||
|name=occipital lobe, fetal, donor1 | |name=occipital lobe, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 49: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11784,LSID820,release009,COMPLETED | |profile_hcage=CNhs11784,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 88: | Line 100: | ||
|top_motifs=PRRX1,2:4.73817258856;NKX2-3_NKX2-5:4.56928912053;FOXM1:4.43308904411;POU5F1:4.38904620437;AHR_ARNT_ARNT2:4.35457149444;MZF1:4.09918483294;ZFP161:3.91247462749;ADNP_IRX_SIX_ZHX:3.84748698701;SOX2:3.82729465891;BREu{core}:3.82474359164;POU1F1:3.81329057812;MED-1{core}:3.81107318778;CUX2:3.73677815158;POU3F1..4:3.6699154449;HOXA9_MEIS1:3.66867268136;POU6F1:3.63289364482;ALX1:3.52772895306;ZNF384:3.48945066966;EGR1..3:3.44657462134;FOXP1:3.38300609304;MTE{core}:3.34969152496;OCT4_SOX2{dimer}:3.20865423069;PRDM1:3.16839130295;NKX6-1,2:3.13229464517;SOX17:3.07610851394;FOXD3:3.06151523105;CDC5L:3.05548794355;TFAP2B:2.97540518397;HMGA1,2:2.9733430142;TEF:2.73787347335;PAX4:2.73377914477;PATZ1:2.70108817057;IKZF2:2.69914805462;TFDP1:2.67694070759;DBP:2.64585266768;LHX3,4:2.6438812867;ARID5B:2.55370471796;NHLH1,2:2.50697696248;RFX1:2.48983741012;T:2.47023990863;RREB1:2.44331402629;REST:2.40120659773;MYFfamily:2.37362605307;GTF2I:2.37285810271;HOX{A4,D4}:2.35943511886;ONECUT1,2:2.33215021627;TGIF1:2.30449740435;GATA4:2.28578153915;SOX{8,9,10}:2.18892297756;GFI1B:2.18051811351;HIC1:2.04606351774;PAX5:2.00543318782;ATF2:1.99177234216;NRF1:1.94709299465;GFI1:1.93627095635;BPTF:1.89881319775;ZBTB6:1.86704310292;SMAD1..7,9:1.86505379786;GCM1,2:1.85328781451;ZIC1..3:1.85085758142;PITX1..3:1.82545166117;TOPORS:1.7994322399;MAZ:1.71157274333;AIRE:1.69897287865;LEF1_TCF7_TCF7L1,2:1.68686390011;EVI1:1.67298814141;NKX3-1:1.58144838783;STAT1,3:1.56412607109;FOXQ1:1.49033235207;KLF4:1.48743711019;RORA:1.46220776297;SOX5:1.44556517445;RBPJ:1.44351720321;MTF1:1.42441203102;FOXL1:1.33203292627;ZBTB16:1.30730583418;ZNF143:1.2938039852;PAX8:1.27953800586;FOXP3:1.24975134044;LMO2:1.16404108707;PAX1,9:1.15958847855;YY1:1.11738402991;NANOG:1.11331710189;CDX1,2,4:1.09647741985;JUN:1.03788034962;PAX6:1.03045084468;RFX2..5_RFXANK_RFXAP:0.983667189094;GZF1:0.945835808144;NKX3-2:0.933665461127;EP300:0.880567353776;FOXN1:0.789254944276;FOXA2:0.647805975871;UFEwm:0.622014269984;ZNF423:0.61599063184;TLX2:0.591989415857;SPZ1:0.436711590713;PBX1:0.431630041024;ATF5_CREB3:0.407712608689;XCPE1{core}:0.330327579618;ATF4:0.325926583547;HBP1_HMGB_SSRP1_UBTF:0.293690374351;CREB1:0.246634718519;MYOD1:0.230686542883;SP1:0.221122979018;MAFB:0.201117042746;PAX3,7:0.198979451864;CRX:0.178324912884;XBP1:0.150897719338;GTF2A1,2:0.123183347298;HAND1,2:0.0776323161403;MEF2{A,B,C,D}:0.0624803299128;NFY{A,B,C}:0.0417907162374;FOX{F1,F2,J1}:0.0317750653599;ELK1,4_GABP{A,B1}:-0.0106339719566;PDX1:-0.0539936977205;HMX1:-0.178876330643;DMAP1_NCOR{1,2}_SMARC:-0.187857237558;GATA6:-0.213560378954;TAL1_TCF{3,4,12}:-0.214125574395;E2F1..5:-0.222405438701;POU2F1..3:-0.24532416525;NANOG{mouse}:-0.261922672357;ZNF238:-0.270323947389;NR1H4:-0.28261197903;VSX1,2:-0.403242279687;ZEB1:-0.458515442303;FOX{D1,D2}:-0.488405242212;TFAP2{A,C}:-0.509289910413;HIF1A:-0.530087625996;FOX{I1,J2}:-0.544261158276;EBF1:-0.571756799662;FOXO1,3,4:-0.577238150321;HNF1A:-0.581551450315;SREBF1,2:-0.58952115178;SPIB:-0.61416630259;ALX4:-0.622880523217;PAX2:-0.629550460755;HSF1,2:-0.667665344378;TLX1..3_NFIC{dimer}:-0.755113063773;NKX2-1,4:-0.76147763204;MYBL2:-0.802311606056;HOX{A5,B5}:-0.807302777608;SPI1:-0.810108744967;HNF4A_NR2F1,2:-0.810661653587;CEBPA,B_DDIT3:-0.815765526993;PPARG:-0.871935710579;HOX{A6,A7,B6,B7}:-0.879342168612;RUNX1..3:-0.904347845549;NFIL3:-0.916180424643;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.917052892397;MYB:-0.919560039624;IRF7:-0.931611108375;TEAD1:-0.940427733841;NR3C1:-0.955881894164;SNAI1..3:-0.96583672164;TBP:-0.977916646337;STAT2,4,6:-1.03265717784;NFATC1..3:-1.05397283506;TFAP4:-1.10313473258;GLI1..3:-1.10974153385;bHLH_family:-1.1120533655;IRF1,2:-1.12579601694;NR6A1:-1.12762115141;NFIX:-1.15918728699;IKZF1:-1.16355568721;NFKB1_REL_RELA:-1.17432881063;FOS_FOS{B,L1}_JUN{B,D}:-1.21035584148;FOSL2:-1.22959901593;NFE2L2:-1.2473933152;ZNF148:-1.29805554813;BACH2:-1.30095104446;AR:-1.30294301314;NFE2L1:-1.32180864198;ETS1,2:-1.37275175693;NR5A1,2:-1.38636602266;NFE2:-1.42199532308;TP53:-1.43827647753;STAT5{A,B}:-1.48739317647;TBX4,5:-1.57061544854;ATF6:-1.57208317447;EN1,2:-1.60132708475;HLF:-1.61056624231;ESRRA:-1.6326978557;RXRA_VDR{dimer}:-1.71392239701;HES1:-1.74213143328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.75382747972;ELF1,2,4:-1.79313495606;TFCP2:-1.89558865292;ESR1:-1.90950862067;NKX2-2,8:-1.98619665149;RXR{A,B,G}:-2.13740559928;SRF:-2.37390258431 | |top_motifs=PRRX1,2:4.73817258856;NKX2-3_NKX2-5:4.56928912053;FOXM1:4.43308904411;POU5F1:4.38904620437;AHR_ARNT_ARNT2:4.35457149444;MZF1:4.09918483294;ZFP161:3.91247462749;ADNP_IRX_SIX_ZHX:3.84748698701;SOX2:3.82729465891;BREu{core}:3.82474359164;POU1F1:3.81329057812;MED-1{core}:3.81107318778;CUX2:3.73677815158;POU3F1..4:3.6699154449;HOXA9_MEIS1:3.66867268136;POU6F1:3.63289364482;ALX1:3.52772895306;ZNF384:3.48945066966;EGR1..3:3.44657462134;FOXP1:3.38300609304;MTE{core}:3.34969152496;OCT4_SOX2{dimer}:3.20865423069;PRDM1:3.16839130295;NKX6-1,2:3.13229464517;SOX17:3.07610851394;FOXD3:3.06151523105;CDC5L:3.05548794355;TFAP2B:2.97540518397;HMGA1,2:2.9733430142;TEF:2.73787347335;PAX4:2.73377914477;PATZ1:2.70108817057;IKZF2:2.69914805462;TFDP1:2.67694070759;DBP:2.64585266768;LHX3,4:2.6438812867;ARID5B:2.55370471796;NHLH1,2:2.50697696248;RFX1:2.48983741012;T:2.47023990863;RREB1:2.44331402629;REST:2.40120659773;MYFfamily:2.37362605307;GTF2I:2.37285810271;HOX{A4,D4}:2.35943511886;ONECUT1,2:2.33215021627;TGIF1:2.30449740435;GATA4:2.28578153915;SOX{8,9,10}:2.18892297756;GFI1B:2.18051811351;HIC1:2.04606351774;PAX5:2.00543318782;ATF2:1.99177234216;NRF1:1.94709299465;GFI1:1.93627095635;BPTF:1.89881319775;ZBTB6:1.86704310292;SMAD1..7,9:1.86505379786;GCM1,2:1.85328781451;ZIC1..3:1.85085758142;PITX1..3:1.82545166117;TOPORS:1.7994322399;MAZ:1.71157274333;AIRE:1.69897287865;LEF1_TCF7_TCF7L1,2:1.68686390011;EVI1:1.67298814141;NKX3-1:1.58144838783;STAT1,3:1.56412607109;FOXQ1:1.49033235207;KLF4:1.48743711019;RORA:1.46220776297;SOX5:1.44556517445;RBPJ:1.44351720321;MTF1:1.42441203102;FOXL1:1.33203292627;ZBTB16:1.30730583418;ZNF143:1.2938039852;PAX8:1.27953800586;FOXP3:1.24975134044;LMO2:1.16404108707;PAX1,9:1.15958847855;YY1:1.11738402991;NANOG:1.11331710189;CDX1,2,4:1.09647741985;JUN:1.03788034962;PAX6:1.03045084468;RFX2..5_RFXANK_RFXAP:0.983667189094;GZF1:0.945835808144;NKX3-2:0.933665461127;EP300:0.880567353776;FOXN1:0.789254944276;FOXA2:0.647805975871;UFEwm:0.622014269984;ZNF423:0.61599063184;TLX2:0.591989415857;SPZ1:0.436711590713;PBX1:0.431630041024;ATF5_CREB3:0.407712608689;XCPE1{core}:0.330327579618;ATF4:0.325926583547;HBP1_HMGB_SSRP1_UBTF:0.293690374351;CREB1:0.246634718519;MYOD1:0.230686542883;SP1:0.221122979018;MAFB:0.201117042746;PAX3,7:0.198979451864;CRX:0.178324912884;XBP1:0.150897719338;GTF2A1,2:0.123183347298;HAND1,2:0.0776323161403;MEF2{A,B,C,D}:0.0624803299128;NFY{A,B,C}:0.0417907162374;FOX{F1,F2,J1}:0.0317750653599;ELK1,4_GABP{A,B1}:-0.0106339719566;PDX1:-0.0539936977205;HMX1:-0.178876330643;DMAP1_NCOR{1,2}_SMARC:-0.187857237558;GATA6:-0.213560378954;TAL1_TCF{3,4,12}:-0.214125574395;E2F1..5:-0.222405438701;POU2F1..3:-0.24532416525;NANOG{mouse}:-0.261922672357;ZNF238:-0.270323947389;NR1H4:-0.28261197903;VSX1,2:-0.403242279687;ZEB1:-0.458515442303;FOX{D1,D2}:-0.488405242212;TFAP2{A,C}:-0.509289910413;HIF1A:-0.530087625996;FOX{I1,J2}:-0.544261158276;EBF1:-0.571756799662;FOXO1,3,4:-0.577238150321;HNF1A:-0.581551450315;SREBF1,2:-0.58952115178;SPIB:-0.61416630259;ALX4:-0.622880523217;PAX2:-0.629550460755;HSF1,2:-0.667665344378;TLX1..3_NFIC{dimer}:-0.755113063773;NKX2-1,4:-0.76147763204;MYBL2:-0.802311606056;HOX{A5,B5}:-0.807302777608;SPI1:-0.810108744967;HNF4A_NR2F1,2:-0.810661653587;CEBPA,B_DDIT3:-0.815765526993;PPARG:-0.871935710579;HOX{A6,A7,B6,B7}:-0.879342168612;RUNX1..3:-0.904347845549;NFIL3:-0.916180424643;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.917052892397;MYB:-0.919560039624;IRF7:-0.931611108375;TEAD1:-0.940427733841;NR3C1:-0.955881894164;SNAI1..3:-0.96583672164;TBP:-0.977916646337;STAT2,4,6:-1.03265717784;NFATC1..3:-1.05397283506;TFAP4:-1.10313473258;GLI1..3:-1.10974153385;bHLH_family:-1.1120533655;IRF1,2:-1.12579601694;NR6A1:-1.12762115141;NFIX:-1.15918728699;IKZF1:-1.16355568721;NFKB1_REL_RELA:-1.17432881063;FOS_FOS{B,L1}_JUN{B,D}:-1.21035584148;FOSL2:-1.22959901593;NFE2L2:-1.2473933152;ZNF148:-1.29805554813;BACH2:-1.30095104446;AR:-1.30294301314;NFE2L1:-1.32180864198;ETS1,2:-1.37275175693;NR5A1,2:-1.38636602266;NFE2:-1.42199532308;TP53:-1.43827647753;STAT5{A,B}:-1.48739317647;TBX4,5:-1.57061544854;ATF6:-1.57208317447;EN1,2:-1.60132708475;HLF:-1.61056624231;ESRRA:-1.6326978557;RXRA_VDR{dimer}:-1.71392239701;HES1:-1.74213143328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.75382747972;ELF1,2,4:-1.79313495606;TFCP2:-1.89558865292;ESR1:-1.90950862067;NKX2-2,8:-1.98619665149;RXR{A,B,G}:-2.13740559928;SRF:-2.37390258431 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10073-102A1;search_select_hide=table117:FF:10073-102A1 | |||
}} | }} |
Latest revision as of 12:19, 3 June 2020
Name: | occipital lobe, fetal, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11784 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11784
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11784
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0642 |
10 | 10 | 0.108 |
100 | 100 | 0.537 |
101 | 101 | 0.759 |
102 | 102 | 0.865 |
103 | 103 | 0.101 |
104 | 104 | 0.105 |
105 | 105 | 0.148 |
106 | 106 | 0.0335 |
107 | 107 | 0.0973 |
108 | 108 | 0.971 |
109 | 109 | 7.03297e-4 |
11 | 11 | 0.0283 |
110 | 110 | 0.143 |
111 | 111 | 0.377 |
112 | 112 | 0.201 |
113 | 113 | 0.417 |
114 | 114 | 0.0557 |
115 | 115 | 0.724 |
116 | 116 | 0.349 |
117 | 117 | 0.0293 |
118 | 118 | 0.273 |
119 | 119 | 0.216 |
12 | 12 | 0.504 |
120 | 120 | 0.216 |
121 | 121 | 0.399 |
122 | 122 | 0.715 |
123 | 123 | 0.137 |
124 | 124 | 0.48 |
125 | 125 | 0.51 |
126 | 126 | 0.0142 |
127 | 127 | 0.207 |
128 | 128 | 0.147 |
129 | 129 | 0.365 |
13 | 13 | 0.00461 |
130 | 130 | 0.0777 |
131 | 131 | 0.92 |
132 | 132 | 0.711 |
133 | 133 | 0.242 |
134 | 134 | 0.928 |
135 | 135 | 0.643 |
136 | 136 | 0.0162 |
137 | 137 | 0.475 |
138 | 138 | 0.735 |
139 | 139 | 0.0807 |
14 | 14 | 0.616 |
140 | 140 | 0.647 |
141 | 141 | 0.446 |
142 | 142 | 0.676 |
143 | 143 | 0.00768 |
144 | 144 | 0.947 |
145 | 145 | 0.339 |
146 | 146 | 0.403 |
147 | 147 | 0.956 |
148 | 148 | 0.0402 |
149 | 149 | 0.0771 |
15 | 15 | 0.0872 |
150 | 150 | 0.287 |
151 | 151 | 0.414 |
152 | 152 | 0.0529 |
153 | 153 | 0.84 |
154 | 154 | 0.524 |
155 | 155 | 0.799 |
156 | 156 | 0.575 |
157 | 157 | 0.461 |
158 | 158 | 0.826 |
159 | 159 | 0.269 |
16 | 16 | 0.0409 |
160 | 160 | 0.247 |
161 | 161 | 0.158 |
162 | 162 | 0.588 |
163 | 163 | 0.448 |
164 | 164 | 0.0988 |
165 | 165 | 0.192 |
166 | 166 | 0.98 |
167 | 167 | 0.788 |
168 | 168 | 0.0509 |
169 | 169 | 0.009 |
17 | 17 | 0.0777 |
18 | 18 | 0.216 |
19 | 19 | 0.124 |
2 | 2 | 0.564 |
20 | 20 | 0.536 |
21 | 21 | 0.158 |
22 | 22 | 0.092 |
23 | 23 | 0.178 |
24 | 24 | 0.0273 |
25 | 25 | 0.409 |
26 | 26 | 0.0193 |
27 | 27 | 0.425 |
28 | 28 | 0.636 |
29 | 29 | 0.0696 |
3 | 3 | 0.046 |
30 | 30 | 0.646 |
31 | 31 | 0.708 |
32 | 32 | 0.0383 |
33 | 33 | 0.136 |
34 | 34 | 0.545 |
35 | 35 | 0.555 |
36 | 36 | 0.182 |
37 | 37 | 0.0184 |
38 | 38 | 0.221 |
39 | 39 | 0.24 |
4 | 4 | 0.839 |
40 | 40 | 0.0419 |
41 | 41 | 0.279 |
42 | 42 | 0.202 |
43 | 43 | 0.113 |
44 | 44 | 0.245 |
45 | 45 | 0.565 |
46 | 46 | 0.178 |
47 | 47 | 0.0823 |
48 | 48 | 0.0795 |
49 | 49 | 0.175 |
5 | 5 | 0.317 |
50 | 50 | 0.322 |
51 | 51 | 0.365 |
52 | 52 | 0.359 |
53 | 53 | 0.982 |
54 | 54 | 0.297 |
55 | 55 | 0.64 |
56 | 56 | 0.372 |
57 | 57 | 0.585 |
58 | 58 | 0.215 |
59 | 59 | 0.0381 |
6 | 6 | 0.915 |
60 | 60 | 0.0524 |
61 | 61 | 0.0486 |
62 | 62 | 0.147 |
63 | 63 | 0.126 |
64 | 64 | 0.373 |
65 | 65 | 0.178 |
66 | 66 | 0.333 |
67 | 67 | 0.559 |
68 | 68 | 0.249 |
69 | 69 | 0.511 |
7 | 7 | 0.0524 |
70 | 70 | 0.0181 |
71 | 71 | 0.023 |
72 | 72 | 0.159 |
73 | 73 | 0.0198 |
74 | 74 | 0.533 |
75 | 75 | 0.0491 |
76 | 76 | 0.672 |
77 | 77 | 0.0929 |
78 | 78 | 0.0124 |
79 | 79 | 0.27 |
8 | 8 | 0.106 |
80 | 80 | 0.152 |
81 | 81 | 0.714 |
82 | 82 | 0.363 |
83 | 83 | 0.00566 |
84 | 84 | 0.906 |
85 | 85 | 0.0893 |
86 | 86 | 0.251 |
87 | 87 | 0.00143 |
88 | 88 | 0.696 |
89 | 89 | 0.206 |
9 | 9 | 0.262 |
90 | 90 | 0.384 |
91 | 91 | 0.89 |
92 | 92 | 0.211 |
93 | 93 | 0.985 |
94 | 94 | 0.135 |
95 | 95 | 0.00962 |
96 | 96 | 0.365 |
97 | 97 | 0.799 |
98 | 98 | 0.299 |
99 | 99 | 0.565 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11784
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000955 (brain)
0002021 (occipital lobe)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010073 (human occipital lobe - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
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