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{{f5samples
{{f5samples
|id=FF:10079-102A7
|DRA_sample_Accession=CAGE@SAMD00005817
|name=left atrium, adult, donor1
|accession_numbers=CAGE;DRX008672;DRR009544;DRZ000969;DRZ002354;DRZ012319;DRZ013704
|sample_id=10079
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0007100,UBERON:0000948,UBERON:0002079,UBERON:0000479,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0002081,UBERON:0004151,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=102A7
|rna_box=102
|rna_position=A7
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Ambion
|rna_lot_number=8060182
|rna_catalog_number=Cat:AM6854
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=40 years old adult
|sample_tissue=left atrium
|sample_donor(cell lot)=1
|sample_sex=male
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_weight_ug=100
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs11790,LSID820,release009,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001050,UBERON:0001062,UBERON:0002050,UBERON:0002079,UBERON:0002081,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004151,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007023,UBERON:0007100
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010079
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr5:172662197..172662216,-!p1@NKX2-5!2.39!243.71!NKX2-5;;chr15:42749722..42749739,-!p2@ZFP106!2.26!316.61!ZFP106;;chr20:62680984..62680999,-!p1@SOX18!2.05!145.80!SOX18;;chr4:174451370..174451387,-!p1@HAND2!1.96!90.77!HAND2;;chr7:35293685..35293718,-!p1@TBX20!1.95!87.19!TBX20;;chr8:11561684..11561751,+!p1@GATA4!1.90!78.62!GATA4;;chr1:214161272..214161322,+!p1@PROX1!1.75!76.47!PROX1;;chr1:27240455..27240474,-!p1@NR0B2!1.64!42.88!NR0B2;;chr2:19558373..19558392,-!p1@OSR1!1.59!100.77!OSR1;;chr17:53342311..53342400,+!p1@HLF!1.52!36.45!HLF;;chr21:39870339..39870443,-!p1@ERG!1.52!32.16!ERG;;chr8:25902876..25902936,-!p1@EBF2!1.51!31.45!EBF2;;chr8:10588010..10588030,-!p1@SOX7!1.48!29.30!SOX7;;chr4:174451350..174451363,-!p3@HAND2!1.48!29.30!HAND2;;chr11:46337652..46337682,+!p16@CREB3L1!1.47!28.59!CREB3L1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.47!28.59!SEBOX;;chr16:79634624..79634642,-!p1@MAF!1.46!105.06!MAF;;chr11:47400078..47400106,-!p1@SPI1!1.46!27.87!SPI1;;chr19:46801639..46801699,+!p1@HIF3A!1.46!27.87!HIF3A;;chr4:26165074..26165110,+!p9@RBPJ!1.46!27.87!RBPJ;;chr6:134210243..134210257,+!p1@TCF21!1.44!26.44!TCF21;;chr16:79634595..79634620,-!p2@MAF!1.42!45.03!MAF;;chr14:105935396..105935413,+!p4@MTA1!1.40!24.30!MTA1;;chr18:19749541..19749557,+!p1@GATA6!1.39!72.18!GATA6;;chr12:52437488..52437507,+!p2@NR4A1!1.39!23.58!NR4A1;;chr2:242556880..242556899,-!p5@THAP4!1.38!22.87!THAP4;;chr18:19749386..19749404,+!p2@GATA6!1.36!31.45!GATA6;;chr3:69788576..69788648,+!p1@MITF!1.33!105.77!MITF;;chr1:40105299..40105326,-!p1@HEYL!1.32!20.01!HEYL;;chr5:158526917..158526932,-!p1@EBF1!1.31!47.17!EBF1;;chr2:145277882..145277967,-!p3@ZEB2!1.31!33.59!ZEB2;;chr2:180427261..180427297,-!p6@ZNF385B!1.31!19.30!ZNF385B;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.31!19.30!SEBOX;;chr17:38256822..38256851,-!p1@NR1D1!1.26!132.22!NR1D1;;chr18:53068911..53068935,-!p4@TCF4!1.26!19.30!TCF4;;chr1:170632285..170632309,+!p1@PRRX1!1.26!19.30!PRRX1;;chr8:55370487..55370503,+!p1@SOX17!1.26!17.15!SOX17;;chr2:68592406..68592424,+!p1@PLEK!1.26!17.15!PLEK;;chr8:106330656..106330684,+!p1@ZFPM2!1.25!43.60!ZFPM2;;chr17:1959369..1959388,+!p2@HIC1!1.25!43.60!HIC1;;chr4:174450089..174450153,-!p2@HAND2!1.24!16.44!HAND2;;chr15:96873984..96873999,+!p3@NR2F2!1.21!110.78!NR2F2;;chr5:88178983..88179012,-!p1@MEF2C!1.20!113.64!MEF2C;;chr7:15726296..15726315,-!p1@MEOX2!1.20!15.01!MEOX2;;chr20:30433396..30433414,-!p1@FOXS1!1.20!15.01!FOXS1;;chr7:44143925..44143970,+!p1@AEBP1!1.18!308.75!AEBP1;;chr5:172662230..172662241,-!p3@NKX2-5!1.18!14.29!NKX2-5;;chr16:85932760..85932775,+!p1@IRF8!1.18!14.29!IRF8;;chr1:61548225..61548299,+!p1@NFIA!1.15!171.53!NFIA;;chr18:19749517..19749531,+!p3@GATA6!1.15!23.58!GATA6;;chr17:41739283..41739297,-!p1@MEOX1!1.14!12.86!MEOX1;;chr7:15726243..15726293,-!p2@MEOX2!1.14!12.86!MEOX2;;chr17:38256799..38256815,-!p3@NR1D1!1.12!22.16!NR1D1;;chr20:50159198..50159299,-!p1@NFATC2!1.12!17.87!NFATC2;;chr7:44143997..44144008,+!p3@AEBP1!1.12!15.72!AEBP1;;chr5:172662303..172662320,-!p2@NKX2-5!1.12!12.15!NKX2-5;;chr8:93074803..93074845,-!p1@RUNX1T1!1.12!12.15!RUNX1T1;;chr20:39317868..39317884,-!p1@MAFB!1.11!142.22!MAFB;;chr11:113930425..113930471,+!p1@ZBTB16!1.11!17.15!ZBTB16;;chr5:124084493..124084524,-!p2@ZNF608!1.10!25.73!ZNF608;;chr5:158527104..158527135,-!p4@EBF1!1.09!11.44!EBF1;;chr5:71803177..71803255,-!p1@ZNF366!1.09!11.44!ZNF366;;chr10:131762504..131762555,-!p1@EBF3!1.09!11.44!EBF3;;chr3:25470156..25470227,+!p2@RARB!1.09!11.44!RARB;;chr1:170633058..170633084,+!p5@PRRX1!1.09!11.44!PRRX1;;chr1:61548374..61548415,+!p4@NFIA!1.07!20.01!NFIA;;chr7:44143978..44143989,+!p2@AEBP1!1.07!20.01!AEBP1;;chr2:192015701..192015743,-!p1@STAT4!1.07!15.01!STAT4;;chr2:180427304..180427323,-!p7@ZNF385B!1.07!10.72!ZNF385B;;chr4:149363494..149363543,-!p1@NR3C2!1.07!10.72!NR3C2;;chr19:46800289..46800327,+!p2@HIF3A!1.07!10.72!HIF3A;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.72!KDM5D;;chr20:50179368..50179392,-!p2@NFATC2!1.06!13.58!NFATC2;;chr8:106330696..106330719,+!p2@ZFPM2!1.06!13.58!ZFPM2;;chr13:72441315..72441454,-!p1@DACH1!1.05!20.73!DACH1;;chr15:42743341..42743377,-!p3@ZFP106!1.05!17.15!ZFP106;;chr7:128577972..128578047,+!p1@IRF5!1.05!16.44!IRF5;;chr19:33793430..33793447,-!p1@CEBPA!1.04!42.17!CEBPA;;chr1:61548069..61548102,+!p3@NFIA!1.04!24.30!NFIA;;chr20:61051039..61051057,-!p1@GATA5!1.04!10.01!GATA5;;chr11:47400062..47400077,-!p2@SPI1!1.04!10.01!SPI1;;chr9:124991204..124991246,-!p1@LHX6!1.04!10.01!LHX6;;chr1:170633262..170633285,+!p3@PRRX1!1.01!10.72!PRRX1;;chr12:114845810..114845824,-!p1@TBX5!1.01!9.29!TBX5;;chr1:23696308..23696339,-!p2@ZNF436!1.00!19.30!ZNF436;;chr3:12329358..12329393,+!p3@PPARG!0.99!22.16!PPARG;;chr14:73360799..73360817,-!p1@DPF3!0.98!30.73!DPF3;;chr1:151804244..151804310,-!p1@RORC!0.98!8.58!RORC;;chr1:214161358..214161377,+!p3@PROX1!0.98!8.58!PROX1;;chr20:590944..590960,-!p1@TCF15!0.98!8.58!TCF15;;chr2:242556900..242556916,-!p6@THAP4!0.98!8.58!THAP4;;chr18:19749504..19749515,+!p5@GATA6!0.98!8.58!GATA6;;chr10:51572408..51572454,+!p3@NCOA4!0.96!49.31!NCOA4;;chr1:221053049..221053075,+!p3@HLX!0.96!14.29!HLX;;chr1:170632477..170632506,+!p6@PRRX1!0.95!7.86!PRRX1;;chr16:79634464..79634493,-!p5@MAF!0.95!7.86!MAF;;chr17:6926362..6926377,+!p1@BCL6B!0.95!7.86!BCL6B;;chr8:93074848..93074871,-!p3@RUNX1T1!0.95!7.86!RUNX1T1;;chr22:38380543..38380569,-!p1@SOX10!0.95!7.86!SOX10;;chr3:21792682..21792720,-!p1@ZNF385D!0.95!7.86!ZNF385D;;chr2:145277640..145277771,-!p1@ZEB2!0.94!107.20!ZEB2;;chr9:14314131..14314147,-!p2@NFIB!0.94!44.31!NFIB;;chr3:25469724..25469773,+!p1@RARB!0.94!11.44!RARB;;chr12:26277956..26277980,-!p1@BHLHE41!0.93!27.87!BHLHE41;;chr3:126076264..126076305,-!p2@KLF15!0.93!10.72!KLF15;;chr4:149363475..149363492,-!p2@NR3C2!0.91!7.15!NR3C2;;chr4:26165146..26165163,+!p19@RBPJ!0.91!7.15!RBPJ;;chr18:19749353..19749367,+!p4@GATA6!0.91!7.15!GATA6;;chr13:72441074..72441172,-!p2@DACH1!0.91!7.15!DACH1;;chr5:158527139..158527161,-!p5@EBF1!0.91!7.15!EBF1;;chr7:73038839..73038862,-!p1@MLXIPL!0.91!7.15!MLXIPL;;chr3:18466787..18466839,-!p1@SATB1!0.90!32.16!SATB1;;chr12:96588368..96588394,+!p3@ELK3!0.90!19.30!ELK3;;chr17:7492684..7492778,-!p2@SOX15!0.90!15.01!SOX15;;chr2:145282041..145282092,-!p8@ZEB2!0.90!10.72!ZEB2;;chr20:51588873..51588953,+!p1@TSHZ2!0.90!9.29!TSHZ2;;chr3:21792585..21792625,-!p2@ZNF385D!0.90!7.86!ZNF385D;;chr18:6414884..6414942,-!p1@L3MBTL4!0.89!8.58!L3MBTL4;;chr15:42749346..42749359,-!p7@ZFP106!0.89!7.86!ZFP106;;chr12:24715376..24715432,-!p1@SOX5!0.88!8.58!SOX5;;chr19:45908292..45908374,-!p1@PPP1R13L!0.87!60.75!PPP1R13L;;chr12:26277929..26277955,-!p3@BHLHE41!0.87!9.29!BHLHE41;;chr1:61869835..61869848,+!p8@NFIA!0.87!8.58!NFIA;;chr1:170632959..170632987,+!p4@PRRX1!0.87!7.15!PRRX1;;chr1:214161328..214161348,+!p2@PROX1!0.87!6.43!PROX1;;chr11:47399996..47400014,-!p4@SPI1!0.87!6.43!SPI1;;chrY:2803415..2803468,+!p1@ZFY!0.87!6.43!ZFY;;chrY:21906761..21906810,-!p2@KDM5D!0.87!6.43!KDM5D;;chr16:67198633..67198671,+!p1@HSF4!0.87!6.43!HSF4;;chr17:46126136..46126152,+!p1@NFE2L1!0.86!341.62!NFE2L1;;chr6:19837592..19837621,+!p1@ID4!0.86!40.02!ID4;;chr3:71179746..71179783,-!p7@FOXP1!0.86!22.16!FOXP1;;chr3:126076242..126076257,-!p1@KLF15!0.86!7.86!KLF15;;chr9:77112244..77112262,+!p1@RORB!0.86!7.15!RORB;;chr9:102584262..102584276,+!p1@NR4A3!0.85!14.29!NR4A3;;chr5:88179195..88179224,-!p3@MEF2C!0.85!10.01!MEF2C;;chr3:12330560..12330579,+!p1@PPARG!0.85!7.15!PPARG;;chr1:61924375..61924380,+!p6@NFIA!0.84!8.58!NFIA;;chr2:46524537..46524553,+!p1@EPAS1!0.83!605.35!EPAS1;;chr2:192015750..192015793,-!p2@STAT4!0.83!7.86!STAT4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.83!5.72!PEG3;;chr1:216896752..216896778,-!p1@ESRRG!0.83!5.72!ESRRG;;chr7:35293665..35293680,-!p2@TBX20!0.83!5.72!TBX20;;chr7:63505799..63505904,+!p1@ZNF727!0.83!5.72!ZNF727;;chr15:96874012..96874042,+!p2@NR2F2!0.82!54.32!NR2F2;;chr7:14029283..14029311,-!p1@ETV1!0.82!32.16!ETV1;;chr18:72922811..72922827,+!p1@TSHZ1!0.82!30.02!TSHZ1;;chr7:149470641..149470694,-!p1@ZNF467!0.82!27.16!ZNF467;;chr1:61547894..61547968,+!p2@NFIA!0.82!17.15!NFIA;;chr19:13134772..13134822,+!p2@NFIX!0.82!8.58!NFIX;;chr1:209979467..209979494,-!p1@IRF6!0.82!6.43!IRF6;;chr14:21994449..21994524,-!p2@SALL2!0.81!17.15!SALL2;;chr6:126070769..126070801,+!p1@HEY2!0.81!6.43!HEY2;;chr18:22932080..22932170,-!p1@ZNF521!0.80!24.30!ZNF521;;chr5:88179017..88179046,-!p2@MEF2C!0.80!22.87!MEF2C;;chr2:113057415..113057477,+!p3@ZC3H6!0.80!7.15!ZC3H6;;chr19:35759824..35759891,+!p1@USF2!0.79!173.67!USF2;;chr14:21566731..21566836,-!p1@ZNF219!0.79!60.75!ZNF219;;chr18:53257001..53257015,-!p5@TCF4!0.79!9.29!TCF4;;chr4:87856191..87856208,+!p2@AFF1!0.78!43.60!AFF1;;chr1:170633348..170633399,+!p2@PRRX1!0.78!7.15!PRRX1;;chr7:44143738..44143760,+!p4@AEBP1!0.78!5.72!AEBP1;;chr7:115670804..115670825,-!p1@TFEC!0.78!5.00!TFEC;;chr8:93115274..93115323,-!p4@RUNX1T1!0.78!5.00!RUNX1T1;;chr1:10856639..10856662,-!p2@CASZ1!0.78!5.00!CASZ1;;chr1:214161854..214161892,+!p4@PROX1!0.78!5.00!PROX1;;chr1:221053444..221053473,+!p8@HLX!0.78!5.00!HLX;;chr2:5832508..5832524,+!p1@SOX11!0.78!5.00!SOX11;;chr3:128212033..128212051,-!p1@GATA2!0.78!5.00!GATA2;;chr3:69915385..69915438,+!p3@MITF!0.78!5.00!MITF;;chr4:111544254..111544270,-!p3@PITX2!0.78!5.00!PITX2;;chr19:22193731..22193751,-!p1@ZNF208!0.78!5.00!ZNF208;;chr12:114845834..114845848,-!p5@TBX5!0.78!5.00!TBX5;;chr15:96873921..96873946,+!p1@NR2F2!0.77!152.23!NR2F2;;chr3:114866084..114866118,-!p2@ZBTB20!0.77!19.30!ZBTB20;;chr9:132427972..132428056,+!p1@PRRX2!0.76!6.43!PRRX2;;chr3:169381420..169381535,-!p1@MECOM!0.76!5.72!MECOM;;chr11:64073022..64073056,+!p1@ESRRA!0.75!60.75!ESRRA;;chr19:53636125..53636178,-!p1@ZNF415!0.75!14.29!ZNF415;;chr3:114819124..114819200,-!p3@ZBTB20!0.75!11.44!ZBTB20;;chr3:12329397..12329433,+!p2@PPARG!0.75!11.44!PPARG;;chr1:158969752..158969780,+!p6@IFI16!0.75!8.58!IFI16;;chr12:26277817..26277863,-!p2@BHLHE41!0.75!6.43!BHLHE41;;chr19:16435625..16435682,+!p1@KLF2!0.74!161.52!KLF2;;chr10:111985713..111985774,+!p2@MXI1!0.74!47.17!MXI1;;chr3:114343768..114343822,-!p1@ZBTB20!0.74!21.44!ZBT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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002081;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010227,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg38.nobarcode.ctss.bed.gz
|id=FF:10079-102A7
|is_a=EFO:0002091;;FF:0010079
|is_obsolete=
|library_id=CNhs11790
|library_id_phase_based=2:CNhs11790
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10079
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10079
|name=left atrium, adult, donor1
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11790,LSID820,release009,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0,0,0,0.660246464403414,0,0.225179326089987,0,0.385413166197324,0.975790985646705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232174345827946,0,0,0,0,0,0.680400845522411,0,0,0.935986951755004,0,0,0,0,0,0,0,0,0,0,0,0,0.132391748095693,0.385497356176373,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.234186964128339,0,0.173595131722566,0,0.681366380547863,0,0,0.136843336915242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148045974339127,0,0,0.0675674196169498,0.129515756449626,0.11709348206417,0,0.039448274740592,0.033807299895225,0.0986447574564875,0,0,0,0,-0.0980353512377064,0.6137313903772,0,0,0,0,0,0.11709348206417,0,0,0,0,0,0,0,0,0,0,0,0.0207198881417083,0.234186964128339,0,0,0.222168939309337,0.197123534939147,0,0,0.234186964128339,0,0,0
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|rna_box=102
|rna_catalog_number=Cat:AM6854
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_lot_number=8060182
|rna_od260/230=
|rna_od260/280=
|rna_position=A7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=102A7
|rna_weight_ug=100
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Ambion
|sample_description=
|sample_dev_stage=40 years old adult
|sample_disease=normal
|sample_donor(cell lot)=1
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.05074379250302e-252!GO:0005737;cytoplasm;5.41425388654201e-197!GO:0044444;cytoplasmic part;1.87411479872813e-150!GO:0043226;organelle;6.83176762397878e-118!GO:0043229;intracellular organelle;1.38312530317759e-117!GO:0043231;intracellular membrane-bound organelle;3.65840951372088e-106!GO:0043227;membrane-bound organelle;3.65840951372088e-106!GO:0044422;organelle part;1.83193917197173e-85!GO:0044446;intracellular organelle part;2.79312498380288e-84!GO:0005515;protein binding;4.11089080080525e-77!GO:0005739;mitochondrion;1.60334564972443e-76!GO:0032991;macromolecular complex;3.06155938552985e-74!GO:0030529;ribonucleoprotein complex;5.60755819669742e-54!GO:0044429;mitochondrial part;2.5346284112975e-53!GO:0031090;organelle membrane;6.05070377261468e-45!GO:0044237;cellular metabolic process;5.71974701295892e-42!GO:0043233;organelle lumen;2.24027597986352e-41!GO:0031974;membrane-enclosed lumen;2.24027597986352e-41!GO:0043234;protein complex;3.01638194824536e-41!GO:0044238;primary metabolic process;3.42328160812058e-41!GO:0019538;protein metabolic process;5.79418506599038e-41!GO:0031967;organelle envelope;3.89716410466049e-40!GO:0031975;envelope;6.76072359516833e-40!GO:0016043;cellular component organization and biogenesis;3.13606504264736e-39!GO:0005840;ribosome;1.47584688776939e-38!GO:0006412;translation;3.11747083569213e-37!GO:0044260;cellular macromolecule metabolic process;5.65122867833739e-37!GO:0003723;RNA binding;8.26162562950197e-37!GO:0043170;macromolecule metabolic process;6.44579409637356e-35!GO:0044267;cellular protein metabolic process;3.25942467990918e-34!GO:0005740;mitochondrial envelope;1.14261156139386e-33!GO:0003735;structural constituent of ribosome;1.38912854816006e-33!GO:0031966;mitochondrial membrane;2.11131595497913e-32!GO:0015031;protein transport;4.89871615145438e-32!GO:0033036;macromolecule localization;6.80169777849342e-32!GO:0005829;cytosol;5.97063381034935e-31!GO:0008104;protein localization;1.12480100598054e-30!GO:0045184;establishment of protein localization;1.58319919986568e-30!GO:0033279;ribosomal subunit;1.84706369083529e-29!GO:0009058;biosynthetic process;1.86145762096046e-29!GO:0009059;macromolecule biosynthetic process;2.02703131631746e-29!GO:0019866;organelle inner membrane;2.54978110406175e-29!GO:0005743;mitochondrial inner membrane;1.20260885538668e-28!GO:0044249;cellular biosynthetic process;2.50155407116218e-28!GO:0044428;nuclear part;3.90901890310728e-27!GO:0046907;intracellular transport;1.68720631364706e-26!GO:0006119;oxidative phosphorylation;2.59197236403407e-25!GO:0044455;mitochondrial membrane part;6.5635481230296e-24!GO:0031980;mitochondrial lumen;1.37181175119585e-23!GO:0005759;mitochondrial matrix;1.37181175119585e-23!GO:0065003;macromolecular complex assembly;3.90788593164371e-23!GO:0005746;mitochondrial respiratory chain;6.8767179729234e-23!GO:0022607;cellular component assembly;2.12909147814288e-22!GO:0006886;intracellular protein transport;7.17337836742766e-22!GO:0016071;mRNA metabolic process;3.40254136353114e-20!GO:0008380;RNA splicing;1.83755997789185e-19!GO:0050136;NADH dehydrogenase (quinone) activity;5.23319865381519e-19!GO:0003954;NADH dehydrogenase activity;5.23319865381519e-19!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.23319865381519e-19!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.2348558820743e-19!GO:0005783;endoplasmic reticulum;9.67384204556765e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.72682850348088e-19!GO:0051641;cellular localization;1.06941058103377e-18!GO:0006396;RNA processing;1.72058993110525e-18!GO:0043228;non-membrane-bound organelle;2.28524177009972e-18!GO:0043232;intracellular non-membrane-bound organelle;2.28524177009972e-18!GO:0051649;establishment of cellular localization;2.85318334760657e-18!GO:0005634;nucleus;6.6456892147737e-18!GO:0030964;NADH dehydrogenase complex (quinone);6.37447275185101e-17!GO:0045271;respiratory chain complex I;6.37447275185101e-17!GO:0005747;mitochondrial respiratory chain complex I;6.37447275185101e-17!GO:0051186;cofactor metabolic process;7.22073821066027e-17!GO:0006397;mRNA processing;9.63973447503208e-17!GO:0042775;organelle ATP synthesis coupled electron transport;1.06185546824526e-16!GO:0042773;ATP synthesis coupled electron transport;1.06185546824526e-16!GO:0008092;cytoskeletal protein binding;2.09496530546911e-16!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.32379745832433e-16!GO:0048770;pigment granule;3.11856071964206e-16!GO:0042470;melanosome;3.11856071964206e-16!GO:0015935;small ribosomal subunit;3.24096493621282e-16!GO:0016192;vesicle-mediated transport;4.12956555414375e-16!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.71165505531327e-16!GO:0044445;cytosolic part;6.81915041306067e-16!GO:0012505;endomembrane system;3.18096704501776e-15!GO:0006996;organelle organization and biogenesis;3.63513672620579e-15!GO:0031981;nuclear lumen;6.53515141456732e-15!GO:0005761;mitochondrial ribosome;1.80987286078136e-14!GO:0000313;organellar ribosome;1.80987286078136e-14!GO:0005794;Golgi apparatus;2.00259281359332e-14!GO:0015934;large ribosomal subunit;2.05466810192752e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.4466511817117e-14!GO:0005681;spliceosome;1.55649652889227e-13!GO:0022618;protein-RNA complex assembly;1.61118205560855e-13!GO:0044265;cellular macromolecule catabolic process;2.23079648163325e-13!GO:0009055;electron carrier activity;3.38263836864336e-13!GO:0008135;translation factor activity, nucleic acid binding;4.1979704865668e-13!GO:0008134;transcription factor binding;5.70322304531803e-13!GO:0006732;coenzyme metabolic process;5.81917872086808e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.68877766356342e-13!GO:0044248;cellular catabolic process;9.79222355789837e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;1.19973770563033e-12!GO:0016462;pyrophosphatase activity;1.35778810538845e-12!GO:0006457;protein folding;1.5668096502369e-12!GO:0006091;generation of precursor metabolites and energy;1.63750362897929e-12!GO:0000166;nucleotide binding;3.19574411932323e-12!GO:0006512;ubiquitin cycle;3.3902244278039e-12!GO:0017111;nucleoside-triphosphatase activity;4.20032730192926e-12!GO:0006605;protein targeting;7.52651813769377e-12!GO:0000502;proteasome complex (sensu Eukaryota);9.42453203480468e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.44790363058189e-11!GO:0044432;endoplasmic reticulum part;1.87711599976673e-11!GO:0048193;Golgi vesicle transport;2.00857455182913e-11!GO:0045333;cellular respiration;2.50341169700553e-11!GO:0019941;modification-dependent protein catabolic process;2.71363846503707e-11!GO:0043632;modification-dependent macromolecule catabolic process;2.71363846503707e-11!GO:0006511;ubiquitin-dependent protein catabolic process;3.43302518101214e-11!GO:0016874;ligase activity;3.43302518101214e-11!GO:0044257;cellular protein catabolic process;3.6995494652117e-11!GO:0015980;energy derivation by oxidation of organic compounds;7.35397283068835e-11!GO:0009057;macromolecule catabolic process;1.00544711263369e-10!GO:0010467;gene expression;1.69496449330173e-10!GO:0043283;biopolymer metabolic process;1.79124348431889e-10!GO:0043285;biopolymer catabolic process;2.81438835309851e-10!GO:0009060;aerobic respiration;3.08886107186023e-10!GO:0030029;actin filament-based process;3.18535779359921e-10!GO:0003779;actin binding;3.31559187690154e-10!GO:0016491;oxidoreductase activity;4.34734199821006e-10!GO:0015629;actin cytoskeleton;4.34734199821006e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.10614553875463e-10!GO:0051082;unfolded protein binding;5.48750808434537e-10!GO:0005654;nucleoplasm;9.09286501389574e-10!GO:0008565;protein transporter activity;9.2181547472421e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.06887996152783e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.16992445568597e-09!GO:0030036;actin cytoskeleton organization and biogenesis;1.2446241096072e-09!GO:0006461;protein complex assembly;1.41096674569181e-09!GO:0006413;translational initiation;1.79774287675827e-09!GO:0006446;regulation of translational initiation;2.06837622736387e-09!GO:0012501;programmed cell death;2.44910389659725e-09!GO:0003743;translation initiation factor activity;2.60834251613089e-09!GO:0048523;negative regulation of cellular process;3.2378743115625e-09!GO:0006915;apoptosis;3.40672507700127e-09!GO:0006084;acetyl-CoA metabolic process;3.41986854818819e-09!GO:0030163;protein catabolic process;3.66167674742947e-09!GO:0043412;biopolymer modification;3.8973066948792e-09!GO:0006099;tricarboxylic acid cycle;4.86957391829871e-09!GO:0046356;acetyl-CoA catabolic process;4.86957391829871e-09!GO:0005773;vacuole;5.4551205010187e-09!GO:0031982;vesicle;6.61809558635591e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.34415154063895e-09!GO:0044451;nucleoplasm part;8.65901634444184e-09!GO:0008219;cell death;9.31659921803164e-09!GO:0016265;death;9.31659921803164e-09!GO:0006464;protein modification process;9.38175799305254e-09!GO:0003924;GTPase activity;9.40342499677367e-09!GO:0051246;regulation of protein metabolic process;9.65098343541212e-09!GO:0017076;purine nucleotide binding;1.46286736689631e-08!GO:0031410;cytoplasmic vesicle;1.57391783600278e-08!GO:0031988;membrane-bound vesicle;2.07860248849392e-08!GO:0000323;lytic vacuole;2.74878562291854e-08!GO:0005764;lysosome;2.74878562291854e-08!GO:0043687;post-translational protein modification;3.36424410225521e-08!GO:0009056;catabolic process;3.41395475437951e-08!GO:0005635;nuclear envelope;3.59088504962522e-08!GO:0016023;cytoplasmic membrane-bound vesicle;3.6859220830491e-08!GO:0009109;coenzyme catabolic process;3.92713060719204e-08!GO:0048519;negative regulation of biological process;4.41206477391157e-08!GO:0005793;ER-Golgi intermediate compartment;5.08160759019245e-08!GO:0015078;hydrogen ion transmembrane transporter activity;5.16478601564951e-08!GO:0032553;ribonucleotide binding;5.16478601564951e-08!GO:0032555;purine ribonucleotide binding;5.16478601564951e-08!GO:0051187;cofactor catabolic process;5.66391182053732e-08!GO:0015986;ATP synthesis coupled proton transport;5.6929778061208e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.6929778061208e-08!GO:0051188;cofactor biosynthetic process;6.25004598896128e-08!GO:0005768;endosome;6.66274826130921e-08!GO:0019829;cation-transporting ATPase activity;7.57211255786109e-08!GO:0008639;small protein conjugating enzyme activity;8.68365578667432e-08!GO:0005525;GTP binding;1.34265584348338e-07!GO:0046034;ATP metabolic process;1.67175566735969e-07!GO:0004842;ubiquitin-protein ligase activity;1.84861155043874e-07!GO:0003712;transcription cofactor activity;1.86116576264694e-07!GO:0006913;nucleocytoplasmic transport;2.00197832871268e-07!GO:0017038;protein import;2.76648005695223e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.41850027935751e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.7284454619194e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.7284454619194e-07!GO:0016044;membrane organization and biogenesis;3.99483923302374e-07!GO:0006163;purine nucleotide metabolic process;4.08293895024521e-07!GO:0019787;small conjugating protein ligase activity;4.59833763143884e-07!GO:0051169;nuclear transport;4.69633947276051e-07!GO:0005789;endoplasmic reticulum membrane;4.75315716931701e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.86152068250133e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.9410667572933e-07!GO:0006793;phosphorus metabolic process;5.78460588893245e-07!GO:0006796;phosphate metabolic process;5.78460588893245e-07!GO:0009141;nucleoside triphosphate metabolic process;6.58171832485389e-07!GO:0031252;leading edge;6.97911543079633e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;7.55552839472971e-07!GO:0000375;RNA splicing, via transesterification reactions;7.55552839472971e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.55552839472971e-07!GO:0005788;endoplasmic reticulum lumen;8.20607844461826e-07!GO:0045259;proton-transporting ATP synthase complex;8.63694340266349e-07!GO:0044262;cellular carbohydrate metabolic process;1.12467469481809e-06!GO:0031965;nuclear membrane;1.15442375387433e-06!GO:0007010;cytoskeleton organization and biogenesis;1.16872197840292e-06!GO:0009150;purine ribonucleotide metabolic process;1.21515243092847e-06!GO:0032561;guanyl ribonucleotide binding;1.31337704856236e-06!GO:0019001;guanyl nucleotide binding;1.31337704856236e-06!GO:0044431;Golgi apparatus part;1.44159346187983e-06!GO:0006754;ATP biosynthetic process;1.95009820691999e-06!GO:0006753;nucleoside phosphate metabolic process;1.95009820691999e-06!GO:0009108;coenzyme biosynthetic process;2.27568390710609e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.55618733182e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.87483601053741e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.87483601053741e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.81747428917639e-06!GO:0008361;regulation of cell size;6.01575487777538e-06!GO:0009259;ribonucleotide metabolic process;6.02212014684299e-06!GO:0005770;late endosome;6.40961733516967e-06!GO:0009142;nucleoside triphosphate biosynthetic process;6.56412465597606e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.56412465597606e-06!GO:0016310;phosphorylation;6.96603031527761e-06!GO:0016564;transcription repressor activity;7.4474214643955e-06!GO:0006164;purine nucleotide biosynthetic process;8.60050437948243e-06!GO:0016604;nuclear body;8.78819848214969e-06!GO:0007264;small GTPase mediated signal transduction;8.78819848214969e-06!GO:0016049;cell growth;9.35966531121876e-06!GO:0043069;negative regulation of programmed cell death;1.00470410755485e-05!GO:0007517;muscle development;1.16181126923393e-05!GO:0043066;negative regulation of apoptosis;1.22894144212087e-05!GO:0006606;protein import into nucleus;1.39555056357379e-05!GO:0005741;mitochondrial outer membrane;1.44435283181411e-05!GO:0030120;vesicle coat;1.45540222031671e-05!GO:0030662;coated vesicle membrane;1.45540222031671e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.53811142372666e-05!GO:0006916;anti-apoptosis;1.65565047719988e-05!GO:0051170;nuclear import;1.83239720986722e-05!GO:0031968;organelle outer membrane;2.32996741955807e-05!GO:0019867;outer membrane;2.35851594451199e-05!GO:0016881;acid-amino acid ligase activity;2.37347060474036e-05!GO:0006950;response to stress;2.6402054389876e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.65015697640663e-05!GO:0003714;transcription corepressor activity;2.86839713008592e-05!GO:0060047;heart contraction;2.92336811172933e-05!GO:0003015;heart process;2.92336811172933e-05!GO:0009117;nucleotide metabolic process;3.01104975695907e-05!GO:0000314;organellar small ribosomal subunit;3.02423972478929e-05!GO:0005763;mitochondrial small ribosomal subunit;3.02423972478929e-05!GO:0005762;mitochondrial large ribosomal subunit;3.05405197039032e-05!GO:0000315;organellar large ribosomal subunit;3.05405197039032e-05!GO:0048475;coated membrane;3.61653412099878e-05!GO:0030117;membrane coat;3.61653412099878e-05!GO:0005730;nucleolus;3.62777838180342e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.81514895242078e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.82077271857971e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.88670847452823e-05!GO:0019899;enzyme binding;4.78751056600849e-05!GO:0006366;transcription from RNA polymerase II promoter;4.80034534190903e-05!GO:0042981;regulation of apoptosis;5.32817345691548e-05!GO:0051128;regulation of cellular component organization and biogenesis;5.44079664290569e-05!GO:0030133;transport vesicle;6.12268348206874e-05!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;6.36212775027769e-05!GO:0015002;heme-copper terminal oxidase activity;6.36212775027769e-05!GO:0016675;oxidoreductase activity, acting on heme group of donors;6.36212775027769e-05!GO:0004129;cytochrome-c oxidase activity;6.36212775027769e-05!GO:0043067;regulation of programmed cell death;6.61210077246943e-05!GO:0016607;nuclear speck;6.78484488000986e-05!GO:0005798;Golgi-associated vesicle;6.91990212378105e-05!GO:0006897;endocytosis;7.26264814921736e-05!GO:0010324;membrane invagination;7.26264814921736e-05!GO:0044453;nuclear membrane part;7.27522291246065e-05!GO:0016887;ATPase activity;7.70325562286496e-05!GO:0001558;regulation of cell growth;7.72274157503632e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.83327079905773e-05!GO:0006118;electron transport;7.88482988917494e-05!GO:0000139;Golgi membrane;9.29255946062034e-05!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.50018058699146e-05!GO:0008307;structural constituent of muscle;0.000103649892714897!GO:0004298;threonine endopeptidase activity;0.000115456224766118!GO:0030016;myofibril;0.000120664347729152!GO:0043292;contractile fiber;0.000125067517950957!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000140882295049079!GO:0000151;ubiquitin ligase complex;0.000154970168275825!GO:0030554;adenyl nucleotide binding;0.00016005764261765!GO:0009260;ribonucleotide biosynthetic process;0.000174503546257311!GO:0044449;contractile fiber part;0.000191227525306854!GO:0051789;response to protein stimulus;0.000194691744724994!GO:0006986;response to unfolded protein;0.000194691744724994!GO:0005048;signal sequence binding;0.00019999400142197!GO:0005912;adherens junction;0.000214617364598466!GO:0030532;small nuclear ribonucleoprotein complex;0.000217556086765582!GO:0006613;cotranslational protein targeting to membrane;0.000218605349482532!GO:0022890;inorganic cation transmembrane transporter activity;0.000224525008511824!GO:0050789;regulation of biological process;0.000243131531421628!GO:0006635;fatty acid beta-oxidation;0.000261032072356189!GO:0042623;ATPase activity, coupled;0.000262698287291512!GO:0048471;perinuclear region of cytoplasm;0.000280948221682294!GO:0006414;translational elongation;0.000286370348456763!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00029501908309593!GO:0004812;aminoacyl-tRNA ligase activity;0.00029501908309593!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00029501908309593!GO:0044440;endosomal part;0.00029501908309593!GO:0010008;endosome membrane;0.00029501908309593!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000316767153992871!GO:0043284;biopolymer biosynthetic process;0.000332302435162118!GO:0007005;mitochondrion organization and biogenesis;0.000360281921404153!GO:0008016;regulation of heart contraction;0.00036070440379954!GO:0032559;adenyl ribonucleotide binding;0.000391154018103821!GO:0019843;rRNA binding;0.000399284322213043!GO:0005643;nuclear pore;0.000400263536521225!GO:0000245;spliceosome assembly;0.000405035994789814!GO:0005791;rough endoplasmic reticulum;0.000408362652192829!GO:0065002;intracellular protein transport across a membrane;0.000451037451659073!GO:0030027;lamellipodium;0.000565961860888333!GO:0008654;phospholipid biosynthetic process;0.000575584297798536!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000578873949661415!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000578873949661415!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000578873949661415!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000586694749237968!GO:0043038;amino acid activation;0.000604024361760626!GO:0006418;tRNA aminoacylation for protein translation;0.000604024361760626!GO:0043039;tRNA aminoacylation;0.000604024361760626!GO:0051427;hormone receptor binding;0.000619553337989191!GO:0032446;protein modification by small protein conjugation;0.000659728417687641!GO:0046930;pore complex;0.000690812418003492!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000726099654885038!GO:0006259;DNA metabolic process;0.000750187193343217!GO:0003746;translation elongation factor activity;0.000767726901335663!GO:0016567;protein ubiquitination;0.000781862907814382!GO:0001726;ruffle;0.000812128659156407!GO:0005913;cell-cell adherens junction;0.000812128659156407!GO:0005524;ATP binding;0.000812128659156407!GO:0043021;ribonucleoprotein binding;0.000960958540272011!GO:0048522;positive regulation of cellular process;0.000963584947486074!GO:0016853;isomerase activity;0.000976406705820945!GO:0051287;NAD binding;0.00101219976495026!GO:0043566;structure-specific DNA binding;0.00105160096921539!GO:0005769;early endosome;0.00107597776043239!GO:0035257;nuclear hormone receptor binding;0.00111922321555134!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00119375343093298!GO:0003697;single-stranded DNA binding;0.00125189252521117!GO:0040008;regulation of growth;0.0013272313253939!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00138278136972644!GO:0015399;primary active transmembrane transporter activity;0.00138278136972644!GO:0003012;muscle system process;0.00143766204867635!GO:0006936;muscle contraction;0.00143766204867635!GO:0051920;peroxiredoxin activity;0.00143766204867635!GO:0006752;group transfer coenzyme metabolic process;0.00145577330290264!GO:0045786;negative regulation of progression through cell cycle;0.00146521639715671!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00146521639715671!GO:0030017;sarcomere;0.00146521639715671!GO:0045045;secretory pathway;0.00150131591783399!GO:0050662;coenzyme binding;0.00154052176346956!GO:0005905;coated pit;0.00155860268568777!GO:0005975;carbohydrate metabolic process;0.00162033910884498!GO:0019752;carboxylic acid metabolic process;0.00166513130317321!GO:0008250;oligosaccharyl transferase complex;0.00166691269461737!GO:0006631;fatty acid metabolic process;0.0016795988806653!GO:0007243;protein kinase cascade;0.00170796841892567!GO:0016197;endosome transport;0.00171236855549492!GO:0031674;I band;0.00181122583663551!GO:0006082;organic acid metabolic process;0.00183544311610271!GO:0051540;metal cluster binding;0.00205239381937131!GO:0051536;iron-sulfur cluster binding;0.00205239381937131!GO:0004576;oligosaccharyl transferase activity;0.00205351800797276!GO:0006733;oxidoreduction coenzyme metabolic process;0.00205695507886404!GO:0030867;rough endoplasmic reticulum membrane;0.00206496795212943!GO:0003713;transcription coactivator activity;0.00216437329047833!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00238270010021552!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00238270010021552!GO:0006979;response to oxidative stress;0.00246991006556087!GO:0009892;negative regulation of metabolic process;0.00251072158387965!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00252926870622981!GO:0048518;positive regulation of biological process;0.00266379372187648!GO:0009966;regulation of signal transduction;0.0028334720978868!GO:0051539;4 iron, 4 sulfur cluster binding;0.00293523510300509!GO:0031324;negative regulation of cellular metabolic process;0.00296708470835537!GO:0006612;protein targeting to membrane;0.00296882633366393!GO:0005885;Arp2/3 protein complex;0.00305862969066048!GO:0043623;cellular protein complex assembly;0.00328349109408938!GO:0001725;stress fiber;0.00330084748343777!GO:0032432;actin filament bundle;0.00330084748343777!GO:0006333;chromatin assembly or disassembly;0.00353094251384904!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00363254158633773!GO:0006607;NLS-bearing substrate import into nucleus;0.00365087807837775!GO:0051270;regulation of cell motility;0.0036584234606437!GO:0016787;hydrolase activity;0.00367825238686728!GO:0065004;protein-DNA complex assembly;0.00374406734318442!GO:0007265;Ras protein signal transduction;0.00376272549429562!GO:0045454;cell redox homeostasis;0.00376272549429562!GO:0006892;post-Golgi vesicle-mediated transport;0.00378165812685648!GO:0031902;late endosome membrane;0.00387676838179038!GO:0007507;heart development;0.0038968067503844!GO:0008154;actin polymerization and/or depolymerization;0.00394650580028768!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00397509121953071!GO:0005856;cytoskeleton;0.00398228864533493!GO:0033116;ER-Golgi intermediate compartment membrane;0.00422273719792713!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00425084941895182!GO:0050794;regulation of cellular process;0.00459455979219424!GO:0030663;COPI coated vesicle membrane;0.00460949883341539!GO:0030126;COPI vesicle coat;0.00460949883341539!GO:0044255;cellular lipid metabolic process;0.00467638469861257!GO:0019395;fatty acid oxidation;0.00467718343966845!GO:0009165;nucleotide biosynthetic process;0.00492850238501196!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00551628445396576!GO:0044264;cellular polysaccharide metabolic process;0.00551628445396576!GO:0016529;sarcoplasmic reticulum;0.00551628445396576!GO:0016528;sarcoplasm;0.00551628445396576!GO:0005774;vacuolar membrane;0.00564535653807711!GO:0065007;biological regulation;0.00565913752852801!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00593396943659253!GO:0055003;cardiac myofibril assembly;0.0059655276849847!GO:0055013;cardiac muscle cell development;0.0059655276849847!GO:0016563;transcription activator activity;0.00602871567770764!GO:0043492;ATPase activity, coupled to movement of substances;0.00605627163679966!GO:0005976;polysaccharide metabolic process;0.00632327334322563!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0065595184586444!GO:0033043;regulation of organelle organization and biogenesis;0.0065595184586444!GO:0008287;protein serine/threonine phosphatase complex;0.0065974561639729!GO:0005977;glycogen metabolic process;0.00695248541516443!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00716225124867514!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00758226749139795!GO:0005865;striated muscle thin filament;0.00780439806060108!GO:0030137;COPI-coated vesicle;0.00788895567491786!GO:0048659;smooth muscle cell proliferation;0.00802071200482039!GO:0015631;tubulin binding;0.00805975719593523!GO:0030018;Z disc;0.00805975719593523!GO:0032940;secretion by cell;0.00808058039766789!GO:0008286;insulin receptor signaling pathway;0.00815254760791444!GO:0007242;intracellular signaling cascade;0.00821131033543982!GO:0033673;negative regulation of kinase activity;0.00821131033543982!GO:0006469;negative regulation of protein kinase activity;0.00821131033543982!GO:0006007;glucose catabolic process;0.00822454300530642!GO:0016859;cis-trans isomerase activity;0.00841226995822129!GO:0005667;transcription factor complex;0.00867352731710275!GO:0050811;GABA receptor binding;0.0087139712494802!GO:0017166;vinculin binding;0.00872207222236025!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00887713556095351!GO:0006323;DNA packaging;0.00908438762468237!GO:0009967;positive regulation of signal transduction;0.00918428894737408!GO:0030132;clathrin coat of coated pit;0.00918428894737408!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00918430764326773!GO:0048644;muscle morphogenesis;0.00918430764326773!GO:0055008;cardiac muscle morphogensis;0.00918430764326773!GO:0005869;dynactin complex;0.00923124263868418!GO:0017022;myosin binding;0.00939053257865743!GO:0050657;nucleic acid transport;0.00967139017751865!GO:0051236;establishment of RNA localization;0.00967139017751865!GO:0050658;RNA transport;0.00967139017751865!GO:0051087;chaperone binding;0.00990648200999332!GO:0042254;ribosome biogenesis and assembly;0.0100051744070317!GO:0019318;hexose metabolic process;0.0100891864294039!GO:0006818;hydrogen transport;0.010147577873238!GO:0005916;fascia adherens;0.0101876903682728!GO:0030041;actin filament polymerization;0.0102296971848718!GO:0018196;peptidyl-asparagine modification;0.0102296971848718!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0102296971848718!GO:0015036;disulfide oxidoreductase activity;0.0103518309481091!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0105100704712133!GO:0001944;vasculature development;0.0106767308794378!GO:0040011;locomotion;0.0107065122163096!GO:0005765;lysosomal membrane;0.0109328425972645!GO:0006334;nucleosome assembly;0.0109635894708771!GO:0043488;regulation of mRNA stability;0.0109635894708771!GO:0043487;regulation of RNA stability;0.0109635894708771!GO:0015992;proton transport;0.0111014942620521!GO:0035258;steroid hormone receptor binding;0.0113714592095095!GO:0006417;regulation of translation;0.0113736349230535!GO:0042805;actinin binding;0.0114091730310222!GO:0016481;negative regulation of transcription;0.0114159023482982!GO:0001666;response to hypoxia;0.0114253784433942!GO:0006403;RNA localization;0.0119205654364917!GO:0040012;regulation of locomotion;0.0120375603847395!GO:0042802;identical protein binding;0.0121645235927765!GO:0048500;signal recognition particle;0.0121903888471194!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0121933191350329!GO:0006006;glucose metabolic process;0.0123492530245962!GO:0032787;monocarboxylic acid metabolic process;0.0126409040007745!GO:0031032;actomyosin structure organization and biogenesis;0.0126409040007745!GO:0008139;nuclear localization sequence binding;0.013147245883112!GO:0006633;fatty acid biosynthetic process;0.0134147897654649!GO:0031589;cell-substrate adhesion;0.0134599316545629!GO:0046314;phosphocreatine biosynthetic process;0.0134791932286128!GO:0006603;phosphocreatine metabolic process;0.0134791932286128!GO:0019902;phosphatase binding;0.0135503841338544!GO:0016791;phosphoric monoester hydrolase activity;0.0135845142615234!GO:0005996;monosaccharide metabolic process;0.0138102830397702!GO:0006891;intra-Golgi vesicle-mediated transport;0.0140606646756176!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.0140765970330516!GO:0005862;muscle thin filament tropomyosin;0.0141268627856769!GO:0030049;muscle filament sliding;0.0141268627856769!GO:0033275;actin-myosin filament sliding;0.0141268627856769!GO:0048487;beta-tubulin binding;0.0147437727074197!GO:0046474;glycerophospholipid biosynthetic process;0.0147437727074197!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0147437727074197!GO:0045792;negative regulation of cell size;0.0148126370381633!GO:0004722;protein serine/threonine phosphatase activity;0.01483511567851!GO:0030308;negative regulation of cell growth;0.0151744537111382!GO:0031326;regulation of cellular biosynthetic process;0.0152334761323982!GO:0004177;aminopeptidase activity;0.0154974854526076!GO:0019208;phosphatase regulator activity;0.0157289509903263!GO:0009081;branched chain family amino acid metabolic process;0.0158003891648538!GO:0006073;glucan metabolic process;0.0158942713154434!GO:0044437;vacuolar part;0.0160330063435889!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0160330063435889!GO:0004667;prostaglandin-D synthase activity;0.0160330063435889!GO:0050802;circadian sleep/wake cycle, sleep;0.0160330063435889!GO:0022410;circadian sleep/wake cycle process;0.0160330063435889!GO:0042749;regulation of circadian sleep/wake cycle;0.0160330063435889!GO:0016860;intramolecular oxidoreductase activity;0.0161955544769551!GO:0006693;prostaglandin metabolic process;0.0164212912679853!GO:0006692;prostanoid metabolic process;0.0164212912679853!GO:0043681;protein import into mitochondrion;0.0164803405133867!GO:0006629;lipid metabolic process;0.0168898505239951!GO:0001568;blood vessel development;0.0172447121000895!GO:0006650;glycerophospholipid metabolic process;0.0172796585326748!GO:0045098;type III intermediate filament;0.0173412336308264!GO:0001516;prostaglandin biosynthetic process;0.0179649392083022!GO:0046457;prostanoid biosynthetic process;0.0179649392083022!GO:0051348;negative regulation of transferase activity;0.0183880819322196!GO:0014706;striated muscle development;0.0184208093478517!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0185840949173588!GO:0030518;steroid hormone receptor signaling pathway;0.0186766882983464!GO:0003724;RNA helicase activity;0.0187987033931406!GO:0031072;heat shock protein binding;0.0193004204355027!GO:0000902;cell morphogenesis;0.0197439720641989!GO:0032989;cellular structure morphogenesis;0.0197439720641989!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0197881363510438!GO:0006643;membrane lipid metabolic process;0.0197881363510438!GO:0031497;chromatin assembly;0.0200322168625499!GO:0030658;transport vesicle membrane;0.0201662944872888!GO:0016405;CoA-ligase activity;0.0203438390556572!GO:0030100;regulation of endocytosis;0.0206194768203363!GO:0007160;cell-matrix adhesion;0.0209703937314214!GO:0007040;lysosome organization and biogenesis;0.021015546055466!GO:0033002;muscle cell proliferation;0.021023610557215!GO:0030055;cell-matrix junction;0.0210499153653169!GO:0030334;regulation of cell migration;0.0211094293774135!GO:0032780;negative regulation of ATPase activity;0.0213029858200033!GO:0030832;regulation of actin filament length;0.0213208403743928!GO:0048660;regulation of smooth muscle cell proliferation;0.0213521272106612!GO:0008610;lipid biosynthetic process;0.0214041990865573!GO:0030127;COPII vesicle coat;0.0214712298896005!GO:0012507;ER to Golgi transport vesicle membrane;0.0214712298896005!GO:0007006;mitochondrial membrane organization and biogenesis;0.0217029076793216!GO:0005083;small GTPase regulator activity;0.0218314029101663!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0223431596978559!GO:0045047;protein targeting to ER;0.0223431596978559!GO:0045926;negative regulation of growth;0.0223871916807293!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.02382612645903!GO:0030134;ER to Golgi transport vesicle;0.0239101386790557!GO:0005924;cell-substrate adherens junction;0.0239542780151792!GO:0032535;regulation of cellular component size;0.0240483463224874!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0240483463224874!GO:0051271;negative regulation of cell motility;0.0241612815054132!GO:0005100;Rho GTPase activator activity;0.02484824522441!GO:0048738;cardiac muscle development;0.0252288102756251!GO:0019362;pyridine nucleotide metabolic process;0.025593563700523!GO:0046467;membrane lipid biosynthetic process;0.0259342025064883!GO:0004300;enoyl-CoA hydratase activity;0.0260302391249736!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0260892163749462!GO:0019904;protein domain specific binding;0.026397499736751!GO:0030659;cytoplasmic vesicle membrane;0.0265465639398526!GO:0005523;tropomyosin binding;0.0266417295777473!GO:0003729;mRNA binding;0.0266417295777473!GO:0012506;vesicle membrane;0.0266417295777473!GO:0051235;maintenance of localization;0.0277456370927521!GO:0045892;negative regulation of transcription, DNA-dependent;0.0280858924785929!GO:0006509;membrane protein ectodomain proteolysis;0.0280858924785929!GO:0033619;membrane protein proteolysis;0.0280858924785929!GO:0018106;peptidyl-histidine phosphorylation;0.0283016625401607!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0284125332837559!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0284142886263133!GO:0009083;branched chain family amino acid catabolic process;0.0284944975149647!GO:0051252;regulation of RNA metabolic process;0.0292212591438837!GO:0018202;peptidyl-histidine modification;0.029236450906962!GO:0055010;ventricular cardiac muscle morphogenesis;0.0299621394656784!GO:0016584;nucleosome positioning;0.0302884653188103!GO:0003690;double-stranded DNA binding;0.0306593519579361!GO:0030521;androgen receptor signaling pathway;0.0307710451326927!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.031014536285079!GO:0004111;creatine kinase activity;0.031014536285079!GO:0008180;signalosome;0.0315777767292635!GO:0004185;serine carboxypeptidase activity;0.0316365845651705!GO:0004598;peptidylamidoglycolate lyase activity;0.031999178273797!GO:0004504;peptidylglycine monooxygenase activity;0.031999178273797!GO:0006096;glycolysis;0.031999178273797!GO:0045893;positive regulation of transcription, DNA-dependent;0.0320030591602591!GO:0004448;isocitrate dehydrogenase activity;0.0320053303955667!GO:0030172;troponin C binding;0.032136008345378!GO:0006402;mRNA catabolic process;0.0323558354900327!GO:0030031;cell projection biogenesis;0.0325194840345206!GO:0004721;phosphoprotein phosphatase activity;0.0326549026991267!GO:0006399;tRNA metabolic process;0.0334003125341897!GO:0045947;negative regulation of translational initiation;0.0334310696539683!GO:0031970;organelle envelope lumen;0.0334310696539683!GO:0006518;peptide metabolic process;0.0339547954727967!GO:0035035;histone acetyltransferase binding;0.0343104210356259!GO:0008147;structural constituent of bone;0.034355320202569!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0348342116398893!GO:0010257;NADH dehydrogenase complex assembly;0.0348342116398893!GO:0033108;mitochondrial respiratory chain complex assembly;0.0348342116398893!GO:0015630;microtubule cytoskeleton;0.0357888217883068!GO:0006112;energy reserve metabolic process;0.0358976783484196!GO:0019888;protein phosphatase regulator activity;0.0358976783484196!GO:0046394;carboxylic acid biosynthetic process;0.0358976783484196!GO:0016053;organic acid biosynthetic process;0.0358976783484196!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0358976783484196!GO:0001527;microfibril;0.0365901536474187!GO:0031301;integral to organelle membrane;0.0372999746510823!GO:0006778;porphyrin metabolic process;0.0372999746510823!GO:0033013;tetrapyrrole metabolic process;0.0372999746510823!GO:0007266;Rho protein signal transduction;0.0372999746510823!GO:0030140;trans-Golgi network transport vesicle;0.0372999746510823!GO:0022415;viral reproductive process;0.0374224271557647!GO:0008047;enzyme activator activity;0.0374224271557647!GO:0006644;phospholipid metabolic process;0.0374636511993621!GO:0030346;protein phosphatase 2B binding;0.0374636511993621!GO:0016408;C-acyltransferase activity;0.0378404488650473!GO:0006767;water-soluble vitamin metabolic process;0.038149833976177!GO:0051726;regulation of cell cycle;0.0381717315542211!GO:0048468;cell development;0.0381717315542211!GO:0016126;sterol biosynthetic process;0.0381717315542211!GO:0009889;regulation of biosynthetic process;0.0383304843973096!GO:0051028;mRNA transport;0.0386534041909936!GO:0030118;clathrin coat;0.0389103666586655!GO:0008312;7S RNA binding;0.0396690000373705!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0398808395552868!GO:0005813;centrosome;0.0400635725341173!GO:0051393;alpha-actinin binding;0.0408313287851325!GO:0008064;regulation of actin polymerization and/or depolymerization;0.04103653856327!GO:0031901;early endosome membrane;0.0416500854244913!GO:0009066;aspartate family amino acid metabolic process;0.0422168823777531!GO:0005853;eukaryotic translation elongation factor 1 complex;0.04268898638216!GO:0000074;regulation of progression through cell cycle;0.04268898638216!GO:0014866;skeletal myofibril assembly;0.0430748764328517!GO:0050839;cell adhesion molecule binding;0.0431537801081551!GO:0007050;cell cycle arrest;0.0438417879402493!GO:0030911;TPR domain binding;0.0438955207810535!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0440858813316585!GO:0019838;growth factor binding;0.0443338192049234!GO:0006769;nicotinamide metabolic process;0.0454817415444769!GO:0005520;insulin-like growth factor binding;0.0462208153711362!GO:0019903;protein phosphatase binding;0.046473669521743!GO:0015035;protein disulfide oxidoreductase activity;0.0470981837298488!GO:0001980;ischemic regulation of systemic arterial blood pressure;0.0474969632823544!GO:0030336;negative regulation of cell migration;0.0477301128555084!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.048100662506332!GO:0040013;negative regulation of locomotion;0.0489839332646583!GO:0030660;Golgi-associated vesicle membrane;0.0490303938869137!GO:0016311;dephosphorylation;0.0491040189751405!GO:0048662;negative regulation of smooth muscle cell proliferation;0.0491065389025771!GO:0007033;vacuole organization and biogenesis;0.0496818283622111!GO:0000096;sulfur amino acid metabolic process;0.0498030767175285
|sample_id=10079
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=left atrium
|top_motifs=MEF2{A,B,C,D}:5.43561568177;NR1H4:4.19959932578;NFE2L1:3.44200752478;ESRRA:3.27728408349;GCM1,2:3.22706886296;GATA4:3.02809173573;NR5A1,2:3.00276352713;SRF:2.47015038468;MYBL2:2.24478389256;PAX6:2.22640401206;TFAP2{A,C}:2.09833298786;TGIF1:2.05750010683;AR:1.96539819344;MAFB:1.88137510383;XBP1:1.84483368883;SPZ1:1.79176153004;NR6A1:1.75336501185;HOX{A4,D4}:1.74451440011;NFATC1..3:1.73569532182;POU3F1..4:1.73108791521;TFAP4:1.70785760239;IKZF2:1.70700146739;TLX1..3_NFIC{dimer}:1.60926935255;NKX2-2,8:1.54986555763;FOXL1:1.54553320479;RXR{A,B,G}:1.53588366854;GFI1B:1.53107447007;SMAD1..7,9:1.52182120616;HMX1:1.52111669978;KLF4:1.51420246502;HAND1,2:1.48392653722;UFEwm:1.45890412951;PDX1:1.44905109296;SOX5:1.40790923309;HIC1:1.39355036282;TFCP2:1.3899656369;NKX2-1,4:1.3836548208;TBP:1.37052465182;NR3C1:1.2922330953;TLX2:1.26789776131;MTF1:1.25960005985;PPARG:1.22620425898;RBPJ:1.22528759031;EVI1:1.19418258915;PRDM1:1.18666292805;PAX5:1.11269488569;CUX2:1.10615659376;ZIC1..3:1.0979164154;GATA6:1.0899085778;T:1.08373481704;TBX4,5:1.06406078378;ZNF423:1.0593798855;IRF7:1.00047962747;NKX3-2:0.992573288519;NHLH1,2:0.990326452835;HOX{A6,A7,B6,B7}:0.988272077754;RREB1:0.94650616615;MAZ:0.89269153089;TEAD1:0.891731869808;IKZF1:0.884657231743;FOXO1,3,4:0.849483529568;TFAP2B:0.828672818236;RORA:0.818621269631;EGR1..3:0.792177977333;MED-1{core}:0.776222593252;EP300:0.775638700213;PATZ1:0.767115086029;RXRA_VDR{dimer}:0.761919116286;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.760541138469;ZNF384:0.719652610132;HOX{A5,B5}:0.706002244681;SREBF1,2:0.691851952457;EN1,2:0.675840728399;REST:0.673008311756;SP1:0.653561409713;GTF2I:0.647151698544;MYFfamily:0.645715040075;ZFP161:0.590562536519;NKX6-1,2:0.582624198576;EBF1:0.58068224993;CDX1,2,4:0.567388972526;GTF2A1,2:0.565695073793;POU6F1:0.553253489478;FOXQ1:0.521059695789;FOX{D1,D2}:0.508037036545;NFIX:0.479437598256;ALX4:0.469030953694;HNF4A_NR2F1,2:0.463063534242;STAT2,4,6:0.416745121255;MZF1:0.415857435684;ESR1:0.39894004816;LMO2:0.370454336201;IRF1,2:0.3552956144;ZNF238:0.353012899079;BREu{core}:0.343033039465;MTE{core}:0.334811110834;CDC5L:0.320061647158;XCPE1{core}:0.301710218309;STAT1,3:0.240720820144;GLI1..3:0.224228448749;ATF6:0.217053491892;MYOD1:0.215115818616;ZBTB16:0.199724564217;ETS1,2:0.106125596651;BPTF:0.102341016484;GZF1:0.0990003881075;ZEB1:0.0793152822405;ATF2:0.0657385812844;ZBTB6:-0.0220205818962;TOPORS:-0.0364301946652;AIRE:-0.0415596469011;ALX1:-0.0477206489179;SOX17:-0.0595463875113;NANOG:-0.0827962333834;SOX{8,9,10}:-0.0844572658667;ZNF148:-0.099893103962;SPIB:-0.101670353504;PAX2:-0.119038077295;HSF1,2:-0.133560584756;SPI1:-0.155365453764;LHX3,4:-0.15919675528;FOX{F1,F2,J1}:-0.164322850489;FOXP3:-0.168082249165;SNAI1..3:-0.210696777162;FOSL2:-0.240625698678;LEF1_TCF7_TCF7L1,2:-0.282121754207;TP53:-0.299564647086;HNF1A:-0.339376588871;ATF4:-0.342214851812;GFI1:-0.355909838473;PAX1,9:-0.377002100119;HMGA1,2:-0.415881721201;FOXA2:-0.427435901384;JUN:-0.438315068005;ATF5_CREB3:-0.438416400784;YY1:-0.46065796744;DMAP1_NCOR{1,2}_SMARC:-0.472190787904;HOXA9_MEIS1:-0.498987896609;NANOG{mouse}:-0.521528199698;HLF:-0.528603396734;FOXN1:-0.545860875969;CEBPA,B_DDIT3:-0.549656215949;ELF1,2,4:-0.576989713617;NRF1:-0.611323189054;ARID5B:-0.625101228629;RFX2..5_RFXANK_RFXAP:-0.648772624032;ZNF143:-0.658839131385;RUNX1..3:-0.667766845661;NFKB1_REL_RELA:-0.681113432829;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.722717368889;PBX1:-0.757785044496;NKX3-1:-0.795261411269;POU1F1:-0.816197627322;POU5F1:-0.82879306118;FOXP1:-0.838737030095;STAT5{A,B}:-0.858443453321;FOXD3:-0.868308241524;TEF:-0.874072172437;NFE2:-0.912992891426;ONECUT1,2:-0.94369433934;NFIL3:-0.952438007565;TAL1_TCF{3,4,12}:-0.968409957869;SOX2:-1.00785553893;RFX1:-1.02052511399;NFY{A,B,C}:-1.02056837225;FOS_FOS{B,L1}_JUN{B,D}:-1.02184736125;VSX1,2:-1.02415115445;BACH2:-1.04908635792;NFE2L2:-1.06550156589;PAX3,7:-1.09394925886;E2F1..5:-1.12686241432;PAX8:-1.13767400399;CREB1:-1.16247405329;FOXM1:-1.2030298316;CRX:-1.21564069254;ADNP_IRX_SIX_ZHX:-1.22714289348;PITX1..3:-1.24782326313;TFDP1:-1.25599474064;HES1:-1.2769841454;OCT4_SOX2{dimer}:-1.33281717991;bHLH_family:-1.34726798879;NKX2-3_NKX2-5:-1.38770982539;AHR_ARNT_ARNT2:-1.40293863165;HIF1A:-1.5245373594;DBP:-1.60551097191;POU2F1..3:-1.63629335256;PRRX1,2:-1.67427981698;HBP1_HMGB_SSRP1_UBTF:-1.78040267279;MYB:-1.80833721091;FOX{I1,J2}:-1.86883325595;ELK1,4_GABP{A,B1}:-1.92479817847;PAX4:-2.00982757009
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10079-102A7;search_select_hide=table117:FF:10079-102A7
}}
}}

Latest revision as of 12:20, 3 June 2020

Name:left atrium, adult, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11790
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueleft atrium
dev stage40 years old adult
sexmale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyAmbion
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number8060182
catalog numberCat:AM6854
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005817
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11790 CAGE DRX008672 DRR009544
Accession ID Hg19

Library idBAMCTSS
CNhs11790 DRZ000969 DRZ002354
Accession ID Hg38

Library idBAMCTSS
CNhs11790 DRZ012319 DRZ013704
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.541
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.288
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.402
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.135
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.385
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.00245
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.78
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.497
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat1.292
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.234
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0.723
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.323
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.234
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0.234
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.168
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.234
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.222
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.234
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.234
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.234
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.534
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.234
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.385
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.234
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.586
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.385
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.871
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.234
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0.385
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0223
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.234
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0.234
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11790

Jaspar motifP-value
MA0002.20.0172
MA0003.10.106
MA0004.10.0324
MA0006.10.388
MA0007.10.815
MA0009.10.244
MA0014.10.467
MA0017.10.376
MA0018.20.00384
MA0019.10.0719
MA0024.10.0183
MA0025.10.229
MA0027.10.756
MA0028.14.08711e-8
MA0029.10.333
MA0030.10.169
MA0031.10.421
MA0035.20.0487
MA0038.10.0123
MA0039.20.0475
MA0040.10.631
MA0041.10.209
MA0042.10.531
MA0043.18.13557e-6
MA0046.10.00411
MA0047.20.0551
MA0048.10.00368
MA0050.10.227
MA0051.10.29
MA0052.14.00945e-27
MA0055.15.57916e-4
MA0057.10.354
MA0058.10.0245
MA0059.10.0141
MA0060.12.85966e-6
MA0061.15.95613e-4
MA0062.25.14143e-15
MA0065.20.28
MA0066.10.419
MA0067.10.149
MA0068.10.591
MA0069.10.792
MA0070.10.766
MA0071.10.109
MA0072.10.688
MA0073.10.815
MA0074.10.674
MA0076.11.33596e-10
MA0077.10.893
MA0078.10.836
MA0079.20.312
MA0080.22.67487e-4
MA0081.10.031
MA0083.17.91336e-4
MA0084.10.981
MA0087.10.659
MA0088.10.0118
MA0090.10.0203
MA0091.10.0632
MA0092.10.119
MA0093.10.0273
MA0099.25.15354e-25
MA0100.10.0132
MA0101.10.00895
MA0102.20.125
MA0103.10.32
MA0104.21.95237e-4
MA0105.18.61399e-5
MA0106.10.0592
MA0107.10.00366
MA0108.22.09717e-10
MA0111.10.524
MA0112.20.0615
MA0113.10.0693
MA0114.10.993
MA0115.10.268
MA0116.10.0732
MA0117.10.118
MA0119.10.468
MA0122.10.428
MA0124.10.589
MA0125.10.741
MA0131.10.0232
MA0135.10.773
MA0136.19.43921e-11
MA0137.20.214
MA0138.20.0166
MA0139.10.117
MA0140.10.807
MA0141.12.74322e-4
MA0142.10.00534
MA0143.10.304
MA0144.10.703
MA0145.10.283
MA0146.10.426
MA0147.12.08073e-4
MA0148.10.926
MA0149.10.517
MA0150.13.10151e-4
MA0152.10.449
MA0153.10.94
MA0154.10.924
MA0155.10.033
MA0156.11.7627e-11
MA0157.10.42
MA0159.10.178
MA0160.10.0143
MA0162.10.35
MA0163.10.0302
MA0164.10.558
MA0258.10.0343
MA0259.10.0344



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11790

Novel motifP-value
10.798
100.105
1000.441
1010.83
1020.684
1030.977
1040.267
1050.777
1060.275
1070.0285
1080.152
1090.381
110.932
1100.378
1110.386
1120.153
1130.136
1140.776
1150.0414
1160.156
1170.0103
1180.0219
1190.0801
120.323
1200.187
1210.701
1220.222
1230.0165
1240.908
1250.857
1260.459
1270.732
1280.0818
1290.326
130.101
1300.728
1310.181
1320.0424
1330.0223
1340.0469
1350.0602
1360.147
1370.669
1380.23
1390.38
140.807
1400.329
1410.52
1420.862
1430.333
1440.417
1450.614
1460.718
1470.00465
1480.158
1490.036
150.251
1500.896
1510.414
1520.237
1530.476
1540.838
1550.881
1560.889
1570.98
1580.276
1590.594
160.941
1600.395
1610.422
1620.903
1630.501
1640.0769
1650.281
1660.013
1670.23
1680.295
1690.217
170.951
180.812
190.0323
20.0406
200.00672
210.823
220.29
230.0548
240.0405
250.295
260.175
270.194
280.254
290.0341
30.583
300.105
310.57
320.455
330.135
340.117
350.888
360.184
370.676
380.87
390.0996
40.33
400.0376
410.93
420.17
430.673
440.0437
450.15
460.825
470.515
480.394
490.712
50.952
500.977
510.946
520.161
530.767
540.479
550.582
560.541
570.153
580.736
590.207
60.75
600.389
610.17
620.977
630.906
640.772
650.283
660.0027
670.744
680.248
690.811
70.393
700.352
710.218
720.762
730.729
740.569
750.0329
760.0569
770.0196
780.815
790.0362
80.748
800.764
810.686
820.092
830.517
840.264
850.0455
860.539
870.0406
880.969
890.0538
90.424
900.207
910.0547
920.312
930.474
940.131
950.0453
960.606
970.809
980.975
990.108



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11790


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002079 (left cardiac atrium)
0000479 (tissue)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0002081 (cardiac atrium)
0004151 (cardiac chamber)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010079 (human left atrium - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010227 (future cardiac atrium)
UBERON:0010316 (germ layer / neural crest)

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