FF:10157-103A4: Difference between revisions

Latest revision as of 12:23, 3 June 2020

Name:	parietal lobe, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12317
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	parietal lobe
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005804

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12317		CAGE		DRX008701		DRR009573

Accession ID Hg19

Library id		BAM		CTSS
CNhs12317		DRZ000998		DRZ002383

Accession ID Hg38

Library id		BAM		CTSS
CNhs12317		DRZ012348		DRZ013733

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10028		download		download		download		download

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.389
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	1.061
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.284
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.0816
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.15
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.567
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0816
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.15
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0112
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.21
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.308
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.21
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0541
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.265
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.905
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0816
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0718
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.115
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.15
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0577
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0816
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.681
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0816
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.168
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.487
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0316
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.0816
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.613
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.71
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0525
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0501
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.674
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0816
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.308
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.487
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.506
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.0816
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.818
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	1.244
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0816
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.15
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.21
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.728
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.693
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.15
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.456
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0816
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.693
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12317

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0356
MA0003.1	MA0003.1	0.251
MA0004.1	MA0004.1	0.342
MA0006.1	MA0006.1	0.227
MA0007.1	MA0007.1	0.298
MA0009.1	MA0009.1	0.2
MA0014.1	MA0014.1	0.651
MA0017.1	MA0017.1	6.08332e-4
MA0018.2	MA0018.2	0.441
MA0019.1	MA0019.1	0.693
MA0024.1	MA0024.1	0.89
MA0025.1	MA0025.1	0.407
MA0027.1	MA0027.1	0.567
MA0028.1	MA0028.1	0.0452
MA0029.1	MA0029.1	0.0325
MA0030.1	MA0030.1	0.605
MA0031.1	MA0031.1	0.972
MA0035.2	MA0035.2	0.00473
MA0038.1	MA0038.1	0.47
MA0039.2	MA0039.2	0.105
MA0040.1	MA0040.1	0.834
MA0041.1	MA0041.1	0.437
MA0042.1	MA0042.1	0.973
MA0043.1	MA0043.1	0.981
MA0046.1	MA0046.1	0.00124
MA0047.2	MA0047.2	0.0757
MA0048.1	MA0048.1	0.12
MA0050.1	MA0050.1	0.0219
MA0051.1	MA0051.1	0.0593
MA0052.1	MA0052.1	0.838
MA0055.1	MA0055.1	7.61174e-4
MA0057.1	MA0057.1	0.825
MA0058.1	MA0058.1	0.257
MA0059.1	MA0059.1	0.0752
MA0060.1	MA0060.1	0.99
MA0061.1	MA0061.1	0.00848
MA0062.2	MA0062.2	0.00139
MA0065.2	MA0065.2	1.67388e-4
MA0066.1	MA0066.1	0.0104
MA0067.1	MA0067.1	0.926
MA0068.1	MA0068.1	0.752
MA0069.1	MA0069.1	0.578
MA0070.1	MA0070.1	0.522
MA0071.1	MA0071.1	0.0178
MA0072.1	MA0072.1	0.272
MA0073.1	MA0073.1	0.443
MA0074.1	MA0074.1	0.215
MA0076.1	MA0076.1	0.0769
MA0077.1	MA0077.1	0.288
MA0078.1	MA0078.1	0.723
MA0079.2	MA0079.2	0.755
MA0080.2	MA0080.2	5.66509e-8
MA0081.1	MA0081.1	0.028
MA0083.1	MA0083.1	0.00846
MA0084.1	MA0084.1	0.845
MA0087.1	MA0087.1	0.95
MA0088.1	MA0088.1	0.181
MA0090.1	MA0090.1	0.384
MA0091.1	MA0091.1	0.47
MA0092.1	MA0092.1	0.292
MA0093.1	MA0093.1	0.344
MA0099.2	MA0099.2	7.7007e-20
MA0100.1	MA0100.1	0.55
MA0101.1	MA0101.1	0.00256
MA0102.2	MA0102.2	0.169
MA0103.1	MA0103.1	0.194
MA0104.2	MA0104.2	0.453
MA0105.1	MA0105.1	0.00288
MA0106.1	MA0106.1	0.0406
MA0107.1	MA0107.1	0.00397
MA0108.2	MA0108.2	0.156
MA0111.1	MA0111.1	0.574
MA0112.2	MA0112.2	0.0012
MA0113.1	MA0113.1	0.52
MA0114.1	MA0114.1	8.81304e-4
MA0115.1	MA0115.1	0.296
MA0116.1	MA0116.1	0.00943
MA0117.1	MA0117.1	0.972
MA0119.1	MA0119.1	0.119
MA0122.1	MA0122.1	0.625
MA0124.1	MA0124.1	0.539
MA0125.1	MA0125.1	0.454
MA0131.1	MA0131.1	0.978
MA0135.1	MA0135.1	0.132
MA0136.1	MA0136.1	1.29401e-12
MA0137.2	MA0137.2	0.669
MA0138.2	MA0138.2	0.361
MA0139.1	MA0139.1	0.388
MA0140.1	MA0140.1	6.72451e-4
MA0141.1	MA0141.1	0.00302
MA0142.1	MA0142.1	0.972
MA0143.1	MA0143.1	0.968
MA0144.1	MA0144.1	0.545
MA0145.1	MA0145.1	0.161
MA0146.1	MA0146.1	0.00956
MA0147.1	MA0147.1	0.335
MA0148.1	MA0148.1	0.0892
MA0149.1	MA0149.1	0.0271
MA0150.1	MA0150.1	3.9443e-4
MA0152.1	MA0152.1	0.633
MA0153.1	MA0153.1	0.0592
MA0154.1	MA0154.1	0.0548
MA0155.1	MA0155.1	0.515
MA0156.1	MA0156.1	1.60029e-8
MA0157.1	MA0157.1	0.703
MA0159.1	MA0159.1	0.00524
MA0160.1	MA0160.1	0.00734
MA0162.1	MA0162.1	0.108
MA0163.1	MA0163.1	5.26442e-5
MA0164.1	MA0164.1	0.869
MA0258.1	MA0258.1	0.0106
MA0259.1	MA0259.1	0.91

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12317

Novel motif	Logo	P-value
1	1	0.0594
10	10	0.0553
100	100	0.308
101	101	0.573
102	102	0.866
103	103	0.13
104	104	0.125
105	105	0.127
106	106	0.0433
107	107	0.0941
108	108	0.965
109	109	0.00245
11	11	0.0124
110	110	0.0458
111	111	0.202
112	112	0.49
113	113	0.577
114	114	0.204
115	115	0.942
116	116	0.138
117	117	0.0103
118	118	0.13
119	119	0.225
12	12	0.46
120	120	0.252
121	121	0.276
122	122	0.859
123	123	0.62
124	124	0.0833
125	125	0.213
126	126	0.0281
127	127	0.452
128	128	0.157
129	129	0.599
13	13	5.95659e-4
130	130	0.123
131	131	0.0591
132	132	0.666
133	133	0.0812
134	134	0.675
135	135	0.157
136	136	0.00129
137	137	0.904
138	138	0.968
139	139	0.122
14	14	0.795
140	140	0.57
141	141	0.7
142	142	0.773
143	143	0.0874
144	144	0.939
145	145	0.102
146	146	0.471
147	147	0.728
148	148	0.205
149	149	0.228
15	15	0.112
150	150	0.154
151	151	0.624
152	152	0.0768
153	153	0.814
154	154	0.457
155	155	0.75
156	156	0.452
157	157	0.44
158	158	0.227
159	159	0.0244
16	16	0.0434
160	160	0.236
161	161	0.23
162	162	0.732
163	163	0.685
164	164	0.0479
165	165	0.0452
166	166	0.894
167	167	0.889
168	168	0.426
169	169	0.0104
17	17	0.133
18	18	0.143
19	19	0.186
2	2	0.851
20	20	0.125
21	21	0.0627
22	22	0.177
23	23	0.499
24	24	0.0293
25	25	0.514
26	26	1.51688e-4
27	27	0.812
28	28	0.608
29	29	0.0107
3	3	0.0531
30	30	0.974
31	31	0.856
32	32	0.0266
33	33	0.0477
34	34	0.606
35	35	0.679
36	36	0.168
37	37	0.0391
38	38	0.363
39	39	0.232
4	4	0.783
40	40	0.0239
41	41	0.289
42	42	0.247
43	43	0.12
44	44	0.203
45	45	0.658
46	46	0.0832
47	47	0.0594
48	48	0.049
49	49	0.21
5	5	0.689
50	50	0.333
51	51	0.388
52	52	0.474
53	53	0.911
54	54	0.332
55	55	0.672
56	56	0.436
57	57	0.377
58	58	0.377
59	59	0.0773
6	6	0.933
60	60	0.0749
61	61	0.0523
62	62	0.23
63	63	0.187
64	64	0.22
65	65	0.28
66	66	0.13
67	67	0.442
68	68	0.0948
69	69	0.323
7	7	0.0522
70	70	0.0494
71	71	0.0122
72	72	0.4
73	73	0.0268
74	74	0.781
75	75	0.0421
76	76	0.472
77	77	0.148
78	78	0.00284
79	79	0.402
8	8	0.0551
80	80	0.418
81	81	0.709
82	82	0.634
83	83	0.0323
84	84	0.666
85	85	0.274
86	86	0.235
87	87	7.28769e-5
88	88	0.82
89	89	0.408
9	9	0.329
90	90	0.135
91	91	0.921
92	92	0.613
93	93	0.93
94	94	0.206
95	95	0.0125
96	96	0.838
97	97	0.718
98	98	0.299
99	99	0.51

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12317

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010034 human parietal lobe - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001872 (parietal lobe)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010034 (human parietal lobe - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10157-103A4
+|DRA_sample_Accession=CAGE@SAMD00005804
-|name=parietal lobe, adult, donor10252
+|HumanCAGEScanFiles=NCig10028;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/parietal%2520lobe%252c%2520adult%252c%2520donor10252.NCig10028.10157-103A4.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/parietal%2520lobe%252c%2520adult%252c%2520donor10252.NCig10028.10157-103A4.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/parietal%2520lobe%252c%2520adult%252c%2520donor10252.NCig10028.10157-103A4.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/parietal%2520lobe%252c%2520adult%252c%2520donor10252.NCig10028.10157-103A4.hg19.GCTATA.pairs.bed.gz
-|sample_id=10157
+|accession_numbers=CAGE;DRX008701;DRR009573;DRZ000998;DRZ002383;DRZ012348;DRZ013733
-|rna_tube_id=103A4
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001872,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
-|rna_box=103
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
-|rna_position=A4
-|sample_cell_lot=NA
-|sample_cell_catalog=NA
-|sample_company=
-|rna_lot_number=
-|rna_catalog_number=
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=
-|sample_tissue=parietal lobe
-|sample_donor(cell lot)=donor: 10252
-|sample_sex=female
-|sample_age=76
-|sample_ethnicity=
-|rna_rin=
-|rna_od260/230=2.26
-|rna_od260/280=2.07
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=Peter Heutink
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
-|rna_weight_ug=55.85025
-|rna_concentration=0.74467
-|sample_note=
-|profile_hcage=CNhs12317,LSID913,release011,COMPLETED
-|profile_cagescan=NCig10028,,,
-|profile_srnaseq=,,,
-|profile_rnaseq=,,,
-|ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001872,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010034
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
+|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.38!238.31!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.24!171.76!OLIG1;;chr9:77112244..77112262,+!p1@RORB!2.16!159.36!RORB;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.15!140.34!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.09!121.95!SOX10;;chr4:81118647..81118666,+!p1@PRDM8!1.97!119.46!PRDM8;;chr17:53342311..53342400,+!p1@HLF!1.94!97.56!HLF;;chr3:181429704..181429722,+!p1@SOX2!1.93!83.91!SOX2;;chr9:114287433..114287513,+!p1@ZNF483!1.86!178.58!ZNF483;;chr10:64134120..64134183,+!p1@ZNF365!1.82!77.71!ZNF365;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.82!64.49!SMARCE1;;chr17:37764128..37764258,-!p1@NEUROD2!1.80!61.39!NEUROD2;;chr2:162272785..162272836,+!p1@TBR1!1.78!58.70!TBR1;;chr11:113930425..113930471,+!p1@ZBTB16!1.76!79.99!ZBTB16;;chr12:26277817..26277863,-!p2@BHLHE41!1.76!74.82!BHLHE41;;chr14:29235961..29236008,+!p1@FOXG1!1.76!56.22!FOXG1;;chr8:40755333..40755352,-!p1@ZMAT4!1.75!54.98!ZMAT4;;chr11:61520075..61520136,+!p1@C11orf9!1.73!107.27!C11orf9;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.71!50.43!POU3F3;;chr2:2334997..2335053,-!p1@MYT1L!1.70!48.57!MYT1L;;chr5:88178983..88179012,-!p1@MEF2C!1.69!351.16!MEF2C;;chr2:95963052..95963106,+!p1@KCNIP3!1.69!48.16!KCNIP3;;chr8:53322304..53322340,-!p1@ST18!1.69!47.74!ST18;;chr12:106976678..106976708,+!p2@RFX4!1.69!47.74!RFX4;;chr2:145277882..145277967,-!p3@ZEB2!1.64!72.55!ZEB2;;chr21:34398234..34398250,+!p1@OLIG2!1.64!42.16!OLIG2;;chr15:80733570..80733659,+!p2@ARNT2!1.63!41.54!ARNT2;;chrX:25034067..25034088,-!p1@ARX!1.60!38.65!ARX;;chr19:46801639..46801699,+!p1@HIF3A!1.59!38.03!HIF3A;;chr19:13135582..13135600,+!p3@NFIX!1.59!37.82!NFIX;;chr2:166326200..166326216,+!p1@CSRNP3!1.58!53.95!CSRNP3;;chr18:53070846..53070902,-!p6@TCF4!1.58!37.41!TCF4;;chr19:13135386..13135435,+!p4@NFIX!1.57!35.96!NFIX;;chr15:80735246..80735321,+!p3@ARNT2!1.54!33.48!ARNT2;;chr22:41763452..41763466,+!p2@TEF!1.52!32.45!TEF;;chr4:57547454..57547469,-!p1@HOPX!1.52!32.24!HOPX;;chr21:34442540..34442560,+!p2@OLIG1!1.52!32.24!OLIG1;;chr2:60781201..60781258,-!p3@BCL11A!1.51!31.00!BCL11A;;chr3:181429741..181429767,+!p2@SOX2!1.50!30.38!SOX2;;chr14:29236269..29236285,+!p3@FOXG1!1.49!29.97!FOXG1;;chr12:54779511..54779577,-!p5@ZNF385A!1.48!28.94!ZNF385A;;chr12:26277956..26277980,-!p1@BHLHE41!1.47!100.04!BHLHE41;;chr15:80696703..80696754,+!p1@ARNT2!1.45!36.38!ARNT2;;chr10:119302232..119302265,+!p1@EMX2!1.43!26.04!EMX2;;chr8:145560111..145560165,-!p2@SCRT1!1.43!25.84!SCRT1;;chr8:53322347..53322378,-!p2@ST18!1.43!25.63!ST18;;chr7:31380292..31380351,-!p1@NEUROD6!1.42!25.22!NEUROD6;;chr8:145560371..145560449,-!p1@SCRT1!1.41!24.80!SCRT1;;chr11:8102846..8102892,+!p1@TUB!1.40!33.28!TUB;;chr16:1031762..1031781,+!p1@SOX8!1.40!23.98!SOX8;;chr9:126774018..126774055,+!p1@LHX2!1.39!23.56!LHX2;;chr11:125034640..125034655,+!p1@PKNOX2!1.39!23.36!PKNOX2;;chr11:31832862..31832884,-!p2@PAX6!1.39!23.36!PAX6;;chr10:48355030..48355090,+!p1@ZNF488!1.38!29.35!ZNF488;;chr10:134599649..134599653,-!p1@NKX6-2!1.36!21.91!NKX6-2;;chr14:33403881..33403924,+!p1@NPAS3!1.35!21.50!NPAS3;;chr17:7492684..7492778,-!p2@SOX15!1.34!43.20!SOX15;;chr15:31658288..31658338,+!p4@KLF13!1.34!20.88!KLF13;;chr12:103351444..103351461,+!p1@ASCL1!1.32!19.84!ASCL1;;chr14:29234581..29234601,+!p2@FOXG1!1.32!19.84!FOXG1;;chr12:54785074..54785122,-!p2@ZNF385A!1.31!29.56!ZNF385A;;chr6:126112039..126112062,+!p8@NCOA7!1.31!23.15!NCOA7;;chr9:77112225..77112238,+!p2@RORB!1.30!18.81!RORB;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.30!18.81!POU3F3;;chr1:61548069..61548102,+!p3@NFIA!1.29!44.23!NFIA;;chr1:214161272..214161322,+!p1@PROX1!1.29!25.63!PROX1;;chr5:92920256..92920282,+!p7@NR2F1!1.28!21.70!NR2F1;;chr11:113930401..113930422,+!p3@ZBTB16!1.28!18.19!ZBTB16;;chr5:88179017..88179046,-!p2@MEF2C!1.27!69.45!MEF2C;;chr19:57352109..57352153,-!p2@ZIM2!1.27!17.78!ZIM2;;chr2:162272889..162272915,+!p2@TBR1!1.27!17.78!TBR1;;chr11:31832658..31832681,-!p1@PAX6!1.26!17.36!PAX6;;chr19:38085768..38085821,+!p1@ZNF540!1.25!24.80!ZNF540;;chr15:31631789..31631811,+!p13@KLF13!1.25!16.95!KLF13;;chr19:46800289..46800327,+!p2@HIF3A!1.25!16.95!HIF3A;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.24!16.53!ZBED1;;chr2:2330039..2330072,-!p6@MYT1L!1.24!16.53!MYT1L;;chr2:60780607..60780624,-!p2@BCL11A!1.23!48.98!BCL11A;;chr6:15401104..15401166,+!p5@JARID2!1.23!15.91!JARID2;;chr11:47400078..47400106,-!p1@SPI1!1.23!15.91!SPI1;;chr17:38256822..38256851,-!p1@NR1D1!1.22!119.46!NR1D1;;chr14:33403648..33403710,+!p3@NPAS3!1.22!15.71!NPAS3;;chr3:126076242..126076257,-!p1@KLF15!1.21!19.02!KLF15;;chrX:118739835..118739862,-!p1@NKRF!1.21!16.74!NKRF;;chr2:162272716..162272753,+!p3@TBR1!1.21!15.29!TBR1;;chr12:106976774..106976788,+!p1@RFX4!1.21!15.09!RFX4;;chr17:70117153..70117174,+!p1@SOX9!1.20!151.91!SOX9;;chr2:200323414..200323455,-!p1@SATB2!1.20!31.62!SATB2;;chr1:244219775..244219893,+!p2@ZNF238!1.20!20.05!ZNF238;;chrX:85969626..85969664,+!p1@DACH2!1.20!14.67!DACH2;;chr9:3525910..3525955,-!p4@RFX3!1.19!42.78!RFX3;;chr3:141105705..141105770,+!p4@ZBTB38!1.18!17.36!ZBTB38;;chr4:57522166..57522260,-!p2@HOPX!1.18!16.12!HOPX;;chr7:63505799..63505904,+!p1@ZNF727!1.18!14.26!ZNF727;;chr2:2328299..2328363,-!p3@MYT1L!1.18!14.05!MYT1L;;chr16:67198633..67198671,+!p1@HSF4!1.17!13.85!HSF4;;chr9:126773880..126773895,+!p2@LHX2!1.17!13.85!LHX2;;chr9:3525867..3525902,-!p3@RFX3!1.16!46.30!RFX3;;chr16:85932760..85932775,+!p1@IRF8!1.16!13.43!IRF8;;chr2:166428839..166428859,+!p2@CSRNP3!1.16!13.43!CSRNP3;;chr2:95963120..95963136,+!p2@KCNIP3!1.16!13.43!KCNIP3;;chr14:58798013..58798071,+!p2@ARID4A!1.16!13.43!ARID4A;;chr6:143266185..143266238,-!p2@HIVEP2!1.15!17.98!HIVEP2;;chr7:73038839..73038862,-!p1@MLXIPL!1.15!13.23!MLXIPL;;chr11:125034605..125034636,+!p2@PKNOX2!1.15!13.02!PKNOX2;;chr6:19837592..19837621,+!p1@ID4!1.14!77.30!ID4;;chr3:24536253..24536328,-!p1@THRB!1.14!24.39!THRB;;chr11:113930291..113930339,+!p2@ZBTB16!1.14!20.88!ZBTB16;;chr19:38720294..38720348,-!p1@DPF1!1.14!16.12!DPF1;;chrX:70315688..70315709,+!p1@FOXO4!1.13!29.35!FOXO4;;chr6:28321971..28321995,-!p1@ZNF323!1.13!12.61!ZNF323;;chr17:38219209..38219230,+!p1@THRA!1.12!158.12!THRA;;chr1:8585945..8586056,-!p3@RERE!1.11!40.30!RERE;;chr3:141105235..141105307,+!p7@ZBTB38!1.11!11.99!ZBTB38;;chr14:24020938..24020988,-!p1@ZFHX2!1.10!16.53!ZFHX2;;chr8:30890810..30890880,-!p1@PURG!1.10!11.57!PURG;;chr1:151032860..151032918,+!p1@MLLT11!1.09!135.38!MLLT11;;chr12:24715376..24715432,-!p1@SOX5!1.09!14.26!SOX5;;chr14:33408072..33408114,+!p2@NPAS3!1.08!13.02!NPAS3;;chr20:42544782..42544828,+!p4@TOX2!1.08!11.16!TOX2;;chr3:21792682..21792720,-!p1@ZNF385D!1.08!11.16!ZNF385D;;chr5:178368186..178368238,+!p1@ZNF454!1.07!19.22!ZNF454;;chr18:53068911..53068935,-!p4@TCF4!1.07!12.19!TCF4;;chr16:67198683..67198698,+!p2@HSF4!1.07!10.75!HSF4;;chr1:40105299..40105326,-!p1@HEYL!1.07!10.75!HEYL;;chr10:38265517..38265591,-!p1@ZNF25!1.06!41.13!ZNF25;;chr19:53636125..53636178,-!p1@ZNF415!1.06!29.97!ZNF415;;chr5:88179518..88179569,-!p5@MEF2C!1.06!13.85!MEF2C;;chr2:180726291..180726311,-!p1@ZNF385B!1.06!10.54!ZNF385B;;chr3:187463179..187463201,-!p2@BCL6!1.05!43.20!BCL6;;chr15:61521417..61521460,-!p2@RORA!1.05!23.15!RORA;;chr13:46549911..46549956,-!p3@ZC3H13!1.05!14.67!ZC3H13;;chr10:64134045..64134083,+!p3@ZNF365!1.05!10.33!ZNF365;;chr19:7580549..7580596,+!p3@ZNF358!1.05!10.33!ZNF358;;chr2:162273241..162273253,+!p4@TBR1!1.05!10.33!TBR1;;chr16:67197654..67197716,+!p3@HSF4!1.05!10.13!HSF4;;chr18:52989031..52989079,-!p2@TCF4!1.04!23.77!TCF4;;chr7:64023410..64023428,-!p2@ZNF680!1.04!15.71!ZNF680;;chr19:13135566..13135577,+!p9@NFIX!1.04!9.92!NFIX;;chr12:24102576..24102623,-!p2@SOX5!1.04!9.92!SOX5;;chr9:126774058..126774081,+!p3@LHX2!1.04!9.92!LHX2;;chr2:113057415..113057477,+!p3@ZC3H6!1.03!12.61!ZC3H6;;chr11:31832807..31832823,-!p4@PAX6!1.03!9.71!PAX6;;chr21:39870339..39870443,-!p1@ERG!1.03!9.71!ERG;;chr14:73360799..73360817,-!p1@DPF3!1.02!33.28!DPF3;;chrX:118739782..118739829,-!p2@NKRF!1.02!9.51!NKRF;;chr16:67197776..67197831,+!p4@HSF4!1.02!9.51!HSF4;;chr5:71803177..71803255,-!p1@ZNF366!1.02!9.51!ZNF366;;chr3:18466787..18466839,-!p1@SATB1!1.01!41.75!SATB1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!1.01!19.84!ZNF395;;chr5:138609489..138609542,+!p8@MATR3!1.01!9.30!MATR3;;chr9:14314946..14314983,-!p8@NFIB!1.01!9.30!NFIB;;chr5:139487608..139487663,+!p3@PURA!1.00!19.43!PURA;;chr20:51588873..51588953,+!p1@TSHZ2!1.00!11.99!TSHZ2;;chr11:125034586..125034604,+!p3@PKNOX2!1.00!9.09!PKNOX2;;chr16:67197952..67197990,+!p5@HSF4!1.00!9.09!HSF4;;chr3:24536332..24536358,-!p2@THRB!1.00!8.89!THRB;;chr2:214016314..214016343,-!p2@IKZF2!0.99!14.88!IKZF2;;chr2:162273254..162273267,+!p6@TBR1!0.99!8.68!TBR1;;chr8:10588010..10588030,-!p1@SOX7!0.99!8.68!SOX7;;chr3:114819124..114819200,-!p3@ZBTB20!0.98!20.26!ZBTB20;;chr2:2335070..2335098,-!p4@MYT1L!0.98!8.47!MYT1L;;chr3:114343039..114343085,-!p8@ZBTB20!0.98!8.47!ZBTB20;;chr4:57547751..57547764,-!p6@HOPX!0.98!8.47!HOPX;;chr10:31610110..31610159,+!p2@ZEB1!0.98!8.47!ZEB1;;chr12:106976656..106976672,+!p4@RFX4!0.98!8.47!RFX4;;chr15:31631813..31631825,+!p17@KLF13!0.98!8.47!KLF13;;chr18:53070913..53070933,-!p16@TCF4!0.98!8.47!TCF4;;chr12:26277929..26277955,-!p3@BHLHE41!0.97!11.99!BHLHE41;;chr3:18466660..18466676,-!p5@SATB1!0.97!9.92!SATB1;;chr18:45935720..45935772,-!p1@ZBTB7C!0.97!8.27!ZBTB7C;;chr8:93074803..93074845,-!p1@RUNX1T1!0.97!8.27!RUNX1T1;;chr6:126112074..126112144,+!p1@NCOA7!0.96!112.44!NCOA7;;chr13:45151434..45151507,-!p3@TSC22D1!0.96!46.30!TSC22D1;;chr6:28321827..28321856,-!p5@ZNF323!0.96!8.06!ZNF323;;chr2:166428861..166428883,+!p3@CSRNP3!0.96!8.06!CSRNP3;;chr2:42721205..42721307,+!p4@MTA3!0.96!8.06!MTA3;;chr2:73520667..73520683,-!p1@EGR4!0.96!8.06!EGR4;;chr7:64023441..64023462,-!p1@ZNF680!0.95!64.90!ZNF680;;chr5:172483347..172483407,+!p1@C5orf41!0.95!61.59!CREBRF;;chr16:79634624..79634642,-!p1@MAF!0.95!32.24!MAF;;chr20:3388541..3388575,-!p2@C20orf194!0.95!31.62!C20orf194;;chr19:4065848..4065909,-!p4@ZBTB7A!0.95!15.71!ZBTB7A;;chr10:64133862..64133884,+!p4@ZNF365!0.95!7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 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 42: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
-|comment=
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-|creation_date=
-|def=
 |has_quality=
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+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/parietal%2520lobe%252c%2520adult%252c%2520donor10252.CNhs12317.10157-103A4.hg19.nobarcode.rdna.fa.gz
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+|is_obsolete=
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+|library_id_phase_based=2:CNhs12317
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+|microRNAs_nn=
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+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10157
+|name=parietal lobe, adult, donor10252
 |namespace=FANTOM5
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+|rna_box=103
+|rna_catalog_number=
+|rna_concentration=0.74467
+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
+|rna_lot_number=
+|rna_od260/230=2.26
+|rna_od260/280=2.07
+|rna_position=A4
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=103A4
+|rna_weight_ug=55.85025
+|sample_age=76
+|sample_category=tissues
+|sample_cell_catalog=NA
+|sample_cell_line=
+|sample_cell_lot=NA
+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=Peter Heutink
+|sample_company=
+|sample_description=
+|sample_dev_stage=
+|sample_disease=
+|sample_donor(cell lot)=donor: 10252
+|sample_ethnicity=
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.21992222522422e-276!GO:0005737;cytoplasm;5.08850574203335e-143!GO:0043226;organelle;6.62645360068471e-102!GO:0043229;intracellular organelle;2.45935695598504e-101!GO:0043227;membrane-bound organelle;1.34851743053192e-94!GO:0043231;intracellular membrane-bound organelle;2.34138799033304e-94!GO:0044444;cytoplasmic part;1.64362078019306e-86!GO:0005515;protein binding;1.39044076941298e-70!GO:0044422;organelle part;7.27327913253785e-60!GO:0044446;intracellular organelle part;6.49583590311412e-59!GO:0032991;macromolecular complex;5.02205669317341e-58!GO:0016043;cellular component organization and biogenesis;5.32681114786341e-46!GO:0003723;RNA binding;7.37873076330159e-37!GO:0005739;mitochondrion;3.47300655417363e-36!GO:0033036;macromolecule localization;1.26374734741257e-35!GO:0030529;ribonucleoprotein complex;5.05890335128443e-35!GO:0015031;protein transport;4.23730265939009e-34!GO:0043234;protein complex;1.98991562187336e-33!GO:0008104;protein localization;3.62092193124956e-32!GO:0043233;organelle lumen;2.51012217107561e-31!GO:0031974;membrane-enclosed lumen;2.51012217107561e-31!GO:0044428;nuclear part;3.173419789854e-31!GO:0045184;establishment of protein localization;4.331432265319e-31!GO:0031090;organelle membrane;8.96310591779762e-31!GO:0046907;intracellular transport;1.43147516957155e-28!GO:0005634;nucleus;2.49165830247232e-28!GO:0051649;establishment of cellular localization;2.3943455952902e-27!GO:0051641;cellular localization;6.01383215524877e-27!GO:0044429;mitochondrial part;6.43314149606269e-27!GO:0016071;mRNA metabolic process;7.28884220966881e-27!GO:0043170;macromolecule metabolic process;1.3295948597377e-26!GO:0044238;primary metabolic process;2.27564654208195e-26!GO:0016192;vesicle-mediated transport;3.34076843536896e-26!GO:0006396;RNA processing;6.1316462420755e-25!GO:0044237;cellular metabolic process;6.44535556145392e-25!GO:0008380;RNA splicing;4.33131917057225e-24!GO:0031975;envelope;1.04642955202266e-23!GO:0031967;organelle envelope;1.43136660725722e-23!GO:0019538;protein metabolic process;2.14493194597037e-23!GO:0006397;mRNA processing;2.76678374198622e-22!GO:0005829;cytosol;8.20515403619816e-22!GO:0006996;organelle organization and biogenesis;1.19270824330541e-20!GO:0006886;intracellular protein transport;2.06995262314932e-20!GO:0044260;cellular macromolecule metabolic process;2.28723082213245e-20!GO:0006119;oxidative phosphorylation;5.74254417662404e-20!GO:0044267;cellular protein metabolic process;8.92953199637878e-20!GO:0031981;nuclear lumen;2.68834399917494e-19!GO:0005740;mitochondrial envelope;5.06457162335543e-19!GO:0043283;biopolymer metabolic process;1.03061031021428e-18!GO:0031966;mitochondrial membrane;1.05680783219899e-18!GO:0000166;nucleotide binding;2.08689392182726e-18!GO:0005794;Golgi apparatus;4.28048906362375e-18!GO:0031982;vesicle;4.68094889151781e-18!GO:0031410;cytoplasmic vesicle;3.63322487935739e-17!GO:0019866;organelle inner membrane;4.85607314377671e-17!GO:0005840;ribosome;1.44587313789379e-16!GO:0005743;mitochondrial inner membrane;2.07545127699871e-16!GO:0005681;spliceosome;3.06913451461469e-16!GO:0031988;membrane-bound vesicle;4.13177576549004e-16!GO:0065003;macromolecular complex assembly;9.16018060058138e-16!GO:0044455;mitochondrial membrane part;2.09207891573225e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.20853830168598e-15!GO:0016023;cytoplasmic membrane-bound vesicle;2.39178372783636e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.71542742830629e-15!GO:0016462;pyrophosphatase activity;2.77130278671154e-15!GO:0006512;ubiquitin cycle;4.7269749010297e-15!GO:0017111;nucleoside-triphosphatase activity;1.61436328540903e-14!GO:0043412;biopolymer modification;2.15906336542734e-14!GO:0043687;post-translational protein modification;3.64342776599357e-14!GO:0006412;translation;4.43835175820483e-14!GO:0032553;ribonucleotide binding;4.53797633404825e-14!GO:0032555;purine ribonucleotide binding;4.53797633404825e-14!GO:0005746;mitochondrial respiratory chain;4.90847922361548e-14!GO:0022607;cellular component assembly;5.37148969188198e-14!GO:0006464;protein modification process;1.57548233710013e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.01219664510312e-13!GO:0003954;NADH dehydrogenase activity;2.01219664510312e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.01219664510312e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.45365698896361e-13!GO:0045045;secretory pathway;4.2224094373124e-13!GO:0017076;purine nucleotide binding;4.71346973365209e-13!GO:0005654;nucleoplasm;7.54523419549896e-13!GO:0010467;gene expression;1.16685003218769e-12!GO:0030695;GTPase regulator activity;1.44280142846767e-12!GO:0003735;structural constituent of ribosome;1.97291794816986e-12!GO:0016874;ligase activity;3.18482874399734e-12!GO:0006457;protein folding;3.2389956056946e-12!GO:0007264;small GTPase mediated signal transduction;4.50395340193719e-12!GO:0044451;nucleoplasm part;8.52278845465295e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.72793554176471e-11!GO:0045271;respiratory chain complex I;1.72793554176471e-11!GO:0005747;mitochondrial respiratory chain complex I;1.72793554176471e-11!GO:0005083;small GTPase regulator activity;2.52999131947132e-11!GO:0006793;phosphorus metabolic process;3.15323274174576e-11!GO:0006796;phosphate metabolic process;3.15323274174576e-11!GO:0048770;pigment granule;3.29952592139358e-11!GO:0042470;melanosome;3.29952592139358e-11!GO:0042775;organelle ATP synthesis coupled electron transport;3.95764080286918e-11!GO:0042773;ATP synthesis coupled electron transport;3.95764080286918e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.15969697727955e-11!GO:0012505;endomembrane system;5.29913778216296e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.28218539937318e-11!GO:0048193;Golgi vesicle transport;7.28780251057162e-11!GO:0008134;transcription factor binding;7.38606724458064e-11!GO:0033279;ribosomal subunit;8.75585642815916e-11!GO:0043228;non-membrane-bound organelle;9.1821293037871e-11!GO:0043232;intracellular non-membrane-bound organelle;9.1821293037871e-11!GO:0008092;cytoskeletal protein binding;1.00107784078778e-10!GO:0030135;coated vesicle;1.61816303344062e-10!GO:0031980;mitochondrial lumen;2.6508339138696e-10!GO:0005759;mitochondrial matrix;2.6508339138696e-10!GO:0009058;biosynthetic process;4.32489953426935e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;6.92808824084364e-10!GO:0006511;ubiquitin-dependent protein catabolic process;7.30815172689367e-10!GO:0006810;transport;8.6069631084644e-10!GO:0019829;cation-transporting ATPase activity;1.02263354576574e-09!GO:0022618;protein-RNA complex assembly;1.03964272968851e-09!GO:0019941;modification-dependent protein catabolic process;1.09793178910505e-09!GO:0043632;modification-dependent macromolecule catabolic process;1.09793178910505e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.14556160342644e-09!GO:0051082;unfolded protein binding;1.24273886117101e-09!GO:0009059;macromolecule biosynthetic process;1.48810478905816e-09!GO:0044257;cellular protein catabolic process;1.54611710929278e-09!GO:0003924;GTPase activity;2.28871849082129e-09!GO:0007010;cytoskeleton organization and biogenesis;3.14856994665889e-09!GO:0005768;endosome;3.14856994665889e-09!GO:0044265;cellular macromolecule catabolic process;3.4302737983971e-09!GO:0007399;nervous system development;4.29280832145197e-09!GO:0016604;nuclear body;4.5788629981977e-09!GO:0006605;protein targeting;7.20499462918415e-09!GO:0032940;secretion by cell;7.39713598115453e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.90804325932032e-09!GO:0044249;cellular biosynthetic process;8.44365033269007e-09!GO:0032559;adenyl ribonucleotide binding;9.48910714613198e-09!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.03707657319255e-08!GO:0043285;biopolymer catabolic process;1.08702903257458e-08!GO:0008565;protein transporter activity;1.09119215663841e-08!GO:0000502;proteasome complex (sensu Eukaryota);1.42258163139214e-08!GO:0044445;cytosolic part;1.53139700544224e-08!GO:0016607;nuclear speck;1.95332252030207e-08!GO:0016044;membrane organization and biogenesis;1.98970878208549e-08!GO:0008639;small protein conjugating enzyme activity;1.98993115913082e-08!GO:0008135;translation factor activity, nucleic acid binding;2.01440084664556e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.09126523225603e-08!GO:0043005;neuron projection;2.1075271261794e-08!GO:0016310;phosphorylation;2.42164919756387e-08!GO:0004842;ubiquitin-protein ligase activity;2.97904118759043e-08!GO:0005524;ATP binding;3.51064126387943e-08!GO:0044431;Golgi apparatus part;3.80224054558917e-08!GO:0051179;localization;4.39061961395373e-08!GO:0005525;GTP binding;4.42939775729379e-08!GO:0015986;ATP synthesis coupled proton transport;4.62911726991383e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.62911726991383e-08!GO:0019899;enzyme binding;5.37501717857661e-08!GO:0019787;small conjugating protein ligase activity;5.89079530942476e-08!GO:0030554;adenyl nucleotide binding;7.62552033428958e-08!GO:0051234;establishment of localization;8.23836024519646e-08!GO:0030163;protein catabolic process;9.91109664700357e-08!GO:0015630;microtubule cytoskeleton;1.22176374202052e-07!GO:0019717;synaptosome;1.24363505559601e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.50351732539051e-07!GO:0030136;clathrin-coated vesicle;2.30353038836908e-07!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.92126773834382e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;2.92126773834382e-07!GO:0000375;RNA splicing, via transesterification reactions;2.92126773834382e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.92126773834382e-07!GO:0006461;protein complex assembly;2.93636965720625e-07!GO:0008287;protein serine/threonine phosphatase complex;3.31234681206601e-07!GO:0009057;macromolecule catabolic process;4.11606301157519e-07!GO:0007242;intracellular signaling cascade;4.37329041644921e-07!GO:0015631;tubulin binding;5.42098271639286e-07!GO:0044248;cellular catabolic process;7.50904348023974e-07!GO:0006446;regulation of translational initiation;7.50904348023974e-07!GO:0046034;ATP metabolic process;8.33196430063179e-07!GO:0030029;actin filament-based process;8.44847693606483e-07!GO:0048523;negative regulation of cellular process;9.99114060659219e-07!GO:0032561;guanyl ribonucleotide binding;1.13779952406973e-06!GO:0019001;guanyl nucleotide binding;1.13779952406973e-06!GO:0015935;small ribosomal subunit;1.16649827560276e-06!GO:0016070;RNA metabolic process;1.37154173077698e-06!GO:0006913;nucleocytoplasmic transport;1.42517702450272e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.49320587353072e-06!GO:0006754;ATP biosynthetic process;1.62589378643668e-06!GO:0006753;nucleoside phosphate metabolic process;1.62589378643668e-06!GO:0016887;ATPase activity;1.67178932815311e-06!GO:0048471;perinuclear region of cytoplasm;1.87628627923128e-06!GO:0003712;transcription cofactor activity;1.87628627923128e-06!GO:0016881;acid-amino acid ligase activity;1.87628627923128e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.88704069758161e-06!GO:0051169;nuclear transport;2.14750649011597e-06!GO:0031252;leading edge;2.29818093298905e-06!GO:0042623;ATPase activity, coupled;2.37491501535386e-06!GO:0007265;Ras protein signal transduction;2.41237493468706e-06!GO:0051186;cofactor metabolic process;2.88110838022595e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.16493213904847e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.16493213904847e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.20178151347619e-06!GO:0000139;Golgi membrane;3.34445710585517e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.63179171076749e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.65459501111229e-06!GO:0006413;translational initiation;3.65459501111229e-06!GO:0044440;endosomal part;3.90500473712115e-06!GO:0010008;endosome membrane;3.90500473712115e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.97276109423643e-06!GO:0005730;nucleolus;3.98023428802561e-06!GO:0009060;aerobic respiration;4.01517474238798e-06!GO:0003743;translation initiation factor activity;4.16189556495153e-06!GO:0008047;enzyme activator activity;4.19016701707226e-06!GO:0048475;coated membrane;4.52990469377621e-06!GO:0030117;membrane coat;4.52990469377621e-06!GO:0009141;nucleoside triphosphate metabolic process;4.66795988671358e-06!GO:0031965;nuclear membrane;4.97124827193277e-06!GO:0003779;actin binding;5.13254321721322e-06!GO:0005096;GTPase activator activity;5.13254321721322e-06!GO:0005874;microtubule;6.3200659701269e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;6.59699309825661e-06!GO:0009150;purine ribonucleotide metabolic process;6.84077954626458e-06!GO:0006163;purine nucleotide metabolic process;7.02114718685079e-06!GO:0051056;regulation of small GTPase mediated signal transduction;7.21426344955644e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.96246009655517e-06!GO:0005783;endoplasmic reticulum;8.12311093365934e-06!GO:0045333;cellular respiration;8.43134589495904e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.65405517597746e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.65405517597746e-06!GO:0009152;purine ribonucleotide biosynthetic process;9.71315611794995e-06!GO:0006164;purine nucleotide biosynthetic process;1.05333330927526e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.13080891846533e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.13080891846533e-05!GO:0009259;ribonucleotide metabolic process;1.24552877913946e-05!GO:0032446;protein modification by small protein conjugation;1.29577437834457e-05!GO:0005635;nuclear envelope;1.31373037007566e-05!GO:0006897;endocytosis;1.82710018787023e-05!GO:0010324;membrane invagination;1.82710018787023e-05!GO:0048519;negative regulation of biological process;1.89733705780128e-05!GO:0016568;chromatin modification;2.22392637825878e-05!GO:0005905;coated pit;2.32142066417955e-05!GO:0045259;proton-transporting ATP synthase complex;2.33194279585304e-05!GO:0006323;DNA packaging;2.39014203171156e-05!GO:0016564;transcription repressor activity;2.66885279026522e-05!GO:0005761;mitochondrial ribosome;2.67788593704374e-05!GO:0000313;organellar ribosome;2.67788593704374e-05!GO:0016567;protein ubiquitination;2.72253870597509e-05!GO:0005769;early endosome;2.94084968986233e-05!GO:0005770;late endosome;3.30432256877275e-05!GO:0051128;regulation of cellular component organization and biogenesis;3.32981126851807e-05!GO:0009260;ribonucleotide biosynthetic process;3.80464142738626e-05!GO:0009055;electron carrier activity;4.16054605940243e-05!GO:0045786;negative regulation of progression through cell cycle;4.76080585115382e-05!GO:0008017;microtubule binding;4.936846428138e-05!GO:0006099;tricarboxylic acid cycle;4.99967303792384e-05!GO:0046356;acetyl-CoA catabolic process;4.99967303792384e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.06621240227643e-05!GO:0015399;primary active transmembrane transporter activity;5.06621240227643e-05!GO:0005085;guanyl-nucleotide exchange factor activity;5.9425603759395e-05!GO:0015934;large ribosomal subunit;6.22613800614291e-05!GO:0030027;lamellipodium;7.76897919319002e-05!GO:0017038;protein import;7.83869205922166e-05!GO:0006259;DNA metabolic process;8.23763277760801e-05!GO:0030425;dendrite;8.29657502611053e-05!GO:0008021;synaptic vesicle;9.26389036501047e-05!GO:0000245;spliceosome assembly;9.43595306578077e-05!GO:0022890;inorganic cation transmembrane transporter activity;9.80321014208418e-05!GO:0016301;kinase activity;0.000100151790007018!GO:0009109;coenzyme catabolic process;0.00010274952966612!GO:0050789;regulation of biological process;0.00010717762533756!GO:0030120;vesicle coat;0.000108097784716943!GO:0030662;coated vesicle membrane;0.000108097784716943!GO:0043492;ATPase activity, coupled to movement of substances;0.000108327090939458!GO:0003714;transcription corepressor activity;0.000143016674515356!GO:0005798;Golgi-associated vesicle;0.000143570129160264!GO:0006732;coenzyme metabolic process;0.000149216916826851!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000155717659268888!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000155770314737926!GO:0050794;regulation of cellular process;0.000178107954521456!GO:0000151;ubiquitin ligase complex;0.000180931882530125!GO:0000159;protein phosphatase type 2A complex;0.000192206231023822!GO:0051187;cofactor catabolic process;0.000193121330177126!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000204803941040697!GO:0006084;acetyl-CoA metabolic process;0.00022964714758667!GO:0043566;structure-specific DNA binding;0.00028145744222436!GO:0046578;regulation of Ras protein signal transduction;0.00029170430348546!GO:0000902;cell morphogenesis;0.00029170430348546!GO:0032989;cellular structure morphogenesis;0.00029170430348546!GO:0048489;synaptic vesicle transport;0.000291989963023264!GO:0006403;RNA localization;0.000311172945265022!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);0.000366206490137315!GO:0003676;nucleic acid binding;0.000375466800594627!GO:0009966;regulation of signal transduction;0.000402669105156529!GO:0050657;nucleic acid transport;0.000404074060940999!GO:0051236;establishment of RNA localization;0.000404074060940999!GO:0050658;RNA transport;0.000404074060940999!GO:0004721;phosphoprotein phosphatase activity;0.000404074060940999!GO:0008219;cell death;0.000421948253798926!GO:0016265;death;0.000421948253798926!GO:0044453;nuclear membrane part;0.000441771136287455!GO:0005643;nuclear pore;0.000441771136287455!GO:0004674;protein serine/threonine kinase activity;0.000454912541211948!GO:0051246;regulation of protein metabolic process;0.000486783983085519!GO:0016311;dephosphorylation;0.000555813708646095!GO:0008601;protein phosphatase type 2A regulator activity;0.000622541838152174!GO:0006613;cotranslational protein targeting to membrane;0.000640511111879291!GO:0003729;mRNA binding;0.000648608036198276!GO:0051087;chaperone binding;0.00066412887790009!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000682383786359347!GO:0008026;ATP-dependent helicase activity;0.000703007631396353!GO:0019902;phosphatase binding;0.000730930384697917!GO:0005793;ER-Golgi intermediate compartment;0.000747750224296579!GO:0019208;phosphatase regulator activity;0.000759709258219739!GO:0012501;programmed cell death;0.000782629426665507!GO:0030133;transport vesicle;0.000786097628717614!GO:0045055;regulated secretory pathway;0.000787683351291252!GO:0003724;RNA helicase activity;0.000795600865356676!GO:0006607;NLS-bearing substrate import into nucleus;0.000810236919372033!GO:0006888;ER to Golgi vesicle-mediated transport;0.000810976276677014!GO:0031072;heat shock protein binding;0.000842193763156014!GO:0006915;apoptosis;0.000844163642866837!GO:0005741;mitochondrial outer membrane;0.000901130389910241!GO:0006366;transcription from RNA polymerase II promoter;0.000907704919285056!GO:0016791;phosphoric monoester hydrolase activity;0.0009134534897021!GO:0030118;clathrin coat;0.000944779273798665!GO:0009056;catabolic process;0.001116834326224!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.0011270331687391!GO:0007269;neurotransmitter secretion;0.00115379022171496!GO:0016197;endosome transport;0.00115405900237592!GO:0006606;protein import into nucleus;0.00125365074481361!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00125487087618727!GO:0004812;aminoacyl-tRNA ligase activity;0.00125487087618727!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00125487087618727!GO:0004386;helicase activity;0.0012711593924116!GO:0051276;chromosome organization and biogenesis;0.00128582475809331!GO:0030867;rough endoplasmic reticulum membrane;0.00131866993323641!GO:0007266;Rho protein signal transduction;0.00138882147205904!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00139653261951539!GO:0005773;vacuole;0.0014782802806409!GO:0006470;protein amino acid dephosphorylation;0.0014983404044452!GO:0043623;cellular protein complex assembly;0.00149863336637922!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00155274947856281!GO:0007019;microtubule depolymerization;0.00156816351631377!GO:0004722;protein serine/threonine phosphatase activity;0.00158427026211689!GO:0005938;cell cortex;0.00161236930387274!GO:0005875;microtubule associated complex;0.00161399958485178!GO:0016050;vesicle organization and biogenesis;0.00164106728521938!GO:0030532;small nuclear ribonucleoprotein complex;0.00169546903946906!GO:0051170;nuclear import;0.00173075760349626!GO:0051188;cofactor biosynthetic process;0.00178402517567899!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00189801567211749!GO:0019226;transmission of nerve impulse;0.00189835433607701!GO:0005791;rough endoplasmic reticulum;0.00216216925210482!GO:0051726;regulation of cell cycle;0.00216769590736528!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0021952514669589!GO:0019904;protein domain specific binding;0.00226036357514226!GO:0050767;regulation of neurogenesis;0.00229591089539576!GO:0048468;cell development;0.00234717884913302!GO:0006752;group transfer coenzyme metabolic process;0.0023763760665186!GO:0005813;centrosome;0.00243108427487887!GO:0031901;early endosome membrane;0.00243108427487887!GO:0030426;growth cone;0.00243108427487887!GO:0009892;negative regulation of metabolic process;0.00243108427487887!GO:0043038;amino acid activation;0.00243108427487887!GO:0006418;tRNA aminoacylation for protein translation;0.00243108427487887!GO:0043039;tRNA aminoacylation;0.00243108427487887!GO:0044432;endoplasmic reticulum part;0.00245656144282031!GO:0030427;site of polarized growth;0.00245969239132073!GO:0019888;protein phosphatase regulator activity;0.00245969239132073!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00245991006702726!GO:0022406;membrane docking;0.00252511566802814!GO:0048278;vesicle docking;0.00252511566802814!GO:0003697;single-stranded DNA binding;0.00253090655239036!GO:0006402;mRNA catabolic process;0.00257978275542096!GO:0016740;transferase activity;0.00261486773355687!GO:0031968;organelle outer membrane;0.00267967541148771!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00272113220794484!GO:0019867;outer membrane;0.00276098408757688!GO:0006904;vesicle docking during exocytosis;0.00284802760792809!GO:0005099;Ras GTPase activator activity;0.00288248582303463!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00288248582303463!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00288248582303463!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00288248582303463!GO:0007049;cell cycle;0.00288248582303463!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00323711647133067!GO:0000074;regulation of progression through cell cycle;0.00329193475954424!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00331161660501899!GO:0033673;negative regulation of kinase activity;0.00339742053079196!GO:0006469;negative regulation of protein kinase activity;0.00339742053079196!GO:0006650;glycerophospholipid metabolic process;0.00339753573386095!GO:0051028;mRNA transport;0.00359245356354818!GO:0008154;actin polymerization and/or depolymerization;0.0037844244384409!GO:0003713;transcription coactivator activity;0.00406653495209357!GO:0006892;post-Golgi vesicle-mediated transport;0.00425420355860669!GO:0008654;phospholipid biosynthetic process;0.004392200668945!GO:0008139;nuclear localization sequence binding;0.004392200668945!GO:0019887;protein kinase regulator activity;0.0044891695668298!GO:0015980;energy derivation by oxidation of organic compounds;0.00456489253679844!GO:0030054;cell junction;0.00457961616965663!GO:0031114;regulation of microtubule depolymerization;0.00475909962476057!GO:0007026;negative regulation of microtubule depolymerization;0.00475909962476057!GO:0005516;calmodulin binding;0.00498162842373137!GO:0009108;coenzyme biosynthetic process;0.00499057569394688!GO:0032011;ARF protein signal transduction;0.00499200563557788!GO:0032012;regulation of ARF protein signal transduction;0.00499200563557788!GO:0006333;chromatin assembly or disassembly;0.00509835064658295!GO:0030424;axon;0.0051701877478608!GO:0016481;negative regulation of transcription;0.00520365197961419!GO:0008286;insulin receptor signaling pathway;0.0052077287394451!GO:0048487;beta-tubulin binding;0.00523316030071275!GO:0048167;regulation of synaptic plasticity;0.00539346596580499!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00544906739504438!GO:0043069;negative regulation of programmed cell death;0.00552418280755264!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00557627474044093!GO:0055083;monovalent inorganic anion homeostasis;0.00557627474044093!GO:0055064;chloride ion homeostasis;0.00557627474044093!GO:0030644;cellular chloride ion homeostasis;0.00557627474044093!GO:0006891;intra-Golgi vesicle-mediated transport;0.00560626182890965!GO:0007017;microtubule-based process;0.00560626182890965!GO:0005815;microtubule organizing center;0.00571875751637636!GO:0005100;Rho GTPase activator activity;0.00575084749349642!GO:0050839;cell adhesion molecule binding;0.00586843761787879!GO:0012506;vesicle membrane;0.00595191848888639!GO:0043066;negative regulation of apoptosis;0.00602306807680781!GO:0006916;anti-apoptosis;0.00608813573890436!GO:0016363;nuclear matrix;0.00619954469808424!GO:0051348;negative regulation of transferase activity;0.00621677848111879!GO:0051261;protein depolymerization;0.00628322462323662!GO:0005869;dynactin complex;0.0063059663210477!GO:0043087;regulation of GTPase activity;0.0065182513057446!GO:0046488;phosphatidylinositol metabolic process;0.00699829156711554!GO:0043209;myelin sheath;0.00713200398631844!GO:0006612;protein targeting to membrane;0.00716562718437979!GO:0046467;membrane lipid biosynthetic process;0.00718766067980892!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00726951516949827!GO:0044448;cell cortex part;0.00745099883893351!GO:0005839;proteasome core complex (sensu Eukaryota);0.00761982960949698!GO:0006887;exocytosis;0.00827898355082225!GO:0051168;nuclear export;0.0082801076385194!GO:0001726;ruffle;0.0082801076385194!GO:0051427;hormone receptor binding;0.00839273039443004!GO:0008186;RNA-dependent ATPase activity;0.00841991429231056!GO:0019903;protein phosphatase binding;0.0084835128685426!GO:0048699;generation of neurons;0.00878617267735859!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00883930372523163!GO:0019198;transmembrane receptor protein phosphatase activity;0.00883930372523163!GO:0001505;regulation of neurotransmitter levels;0.00900740991404239!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00928177720172429!GO:0030258;lipid modification;0.00931754318507179!GO:0005048;signal sequence binding;0.00931754318507179!GO:0050811;GABA receptor binding;0.00932139089451169!GO:0000323;lytic vacuole;0.00932139089451169!GO:0005764;lysosome;0.00932139089451169!GO:0003690;double-stranded DNA binding;0.0097748890272488!GO:0042802;identical protein binding;0.0102097987965032!GO:0019207;kinase regulator activity;0.0102097987965032!GO:0042578;phosphoric ester hydrolase activity;0.010244641918443!GO:0031902;late endosome membrane;0.0106915310860686!GO:0043021;ribonucleoprotein binding;0.0108226705606349!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.0109127013026648!GO:0051920;peroxiredoxin activity;0.0111095624749217!GO:0050803;regulation of synapse structure and activity;0.0112104871470926!GO:0031124;mRNA 3'-end processing;0.0118494464486904!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0119237556850448!GO:0022008;neurogenesis;0.0119798189807692!GO:0031324;negative regulation of cellular metabolic process;0.0120099785429092!GO:0030384;phosphoinositide metabolic process;0.0125575186982507!GO:0005789;endoplasmic reticulum membrane;0.0128237397174924!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0132452865829249!GO:0048500;signal recognition particle;0.0133365269806293!GO:0030658;transport vesicle membrane;0.0134327615725455!GO:0030742;GTP-dependent protein binding;0.013644878263122!GO:0051252;regulation of RNA metabolic process;0.0136660427693871!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0137704291084816!GO:0045892;negative regulation of transcription, DNA-dependent;0.0140656344870678!GO:0043086;negative regulation of catalytic activity;0.0141471371143159!GO:0035257;nuclear hormone receptor binding;0.0141926222338389!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0142773978976775!GO:0004667;prostaglandin-D synthase activity;0.0142773978976775!GO:0050802;circadian sleep/wake cycle, sleep;0.0142773978976775!GO:0022410;circadian sleep/wake cycle process;0.0142773978976775!GO:0042749;regulation of circadian sleep/wake cycle;0.0142773978976775!GO:0030660;Golgi-associated vesicle membrane;0.0142936617330058!GO:0004672;protein kinase activity;0.0144131985948314!GO:0044433;cytoplasmic vesicle part;0.0152616861582384!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0154632377246829!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0154946436130376!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0160713251100684!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0160713251100684!GO:0035035;histone acetyltransferase binding;0.0165845161553149!GO:0046930;pore complex;0.0166804430658919!GO:0042254;ribosome biogenesis and assembly;0.0167311042690089!GO:0051540;metal cluster binding;0.0171395084251874!GO:0051536;iron-sulfur cluster binding;0.0171395084251874!GO:0008361;regulation of cell size;0.0177001690749347!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0177562576048569!GO:0045296;cadherin binding;0.0177770071946786!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0178923463862267!GO:0051020;GTPase binding;0.0181847048699542!GO:0065007;biological regulation;0.0182677165794987!GO:0030182;neuron differentiation;0.0183165617814249!GO:0007243;protein kinase cascade;0.0187386165731679!GO:0003725;double-stranded RNA binding;0.0187399916629231!GO:0000287;magnesium ion binding;0.0187399916629231!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0187399916629231!GO:0033043;regulation of organelle organization and biogenesis;0.0187399916629231!GO:0065009;regulation of a molecular function;0.0193467688705445!GO:0015629;actin cytoskeleton;0.0194122721237428!GO:0007050;cell cycle arrest;0.0195196642522813!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0197522663967907!GO:0004004;ATP-dependent RNA helicase activity;0.0202900262071867!GO:0008022;protein C-terminus binding;0.0202968409091748!GO:0001666;response to hypoxia;0.0207227552710919!GO:0005774;vacuolar membrane;0.0207492939724249!GO:0030041;actin filament polymerization;0.0217564339723846!GO:0065002;intracellular protein transport across a membrane;0.0220695375165526!GO:0007268;synaptic transmission;0.0221165161377927!GO:0006376;mRNA splice site selection;0.022323660459714!GO:0000389;nuclear mRNA 3'-splice site recognition;0.022323660459714!GO:0006401;RNA catabolic process;0.0223719482868316!GO:0009117;nucleotide metabolic process;0.0225099210990134!GO:0006643;membrane lipid metabolic process;0.0228107477969762!GO:0030132;clathrin coat of coated pit;0.02295007374408!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0229661640921939!GO:0006414;translational elongation;0.0239542745358211!GO:0000059;protein import into nucleus, docking;0.0253036989687293!GO:0005868;cytoplasmic dynein complex;0.0253630530923562!GO:0007272;ensheathment of neurons;0.0253630530923562!GO:0008366;axon ensheathment;0.0253630530923562!GO:0019783;small conjugating protein-specific protease activity;0.0254689583714333!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0255992615773084!GO:0000314;organellar small ribosomal subunit;0.0255992615773084!GO:0005763;mitochondrial small ribosomal subunit;0.0255992615773084!GO:0004298;threonine endopeptidase activity;0.0259553116572364!GO:0030137;COPI-coated vesicle;0.0259553116572364!GO:0042026;protein refolding;0.0279524724401714!GO:0000209;protein polyubiquitination;0.0279524724401714!GO:0043488;regulation of mRNA stability;0.0279524724401714!GO:0043487;regulation of RNA stability;0.0279524724401714!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0280794278940914!GO:0005885;Arp2/3 protein complex;0.0286480153396618!GO:0035258;steroid hormone receptor binding;0.0288365590417973!GO:0004843;ubiquitin-specific protease activity;0.0295629388403395!GO:0000062;acyl-CoA binding;0.0301271404636608!GO:0007034;vacuolar transport;0.0306913025535898!GO:0016049;cell growth;0.0317813616758606!GO:0001508;regulation of action potential;0.0323420036790285!GO:0043407;negative regulation of MAP kinase activity;0.0324670091130224!GO:0005952;cAMP-dependent protein kinase complex;0.0326006583568961!GO:0044456;synapse part;0.0326006583568961!GO:0030030;cell projection organization and biogenesis;0.033346925101846!GO:0048858;cell projection morphogenesis;0.033346925101846!GO:0032990;cell part morphogenesis;0.033346925101846!GO:0006378;mRNA polyadenylation;0.0338231869300247!GO:0017166;vinculin binding;0.034018272308648!GO:0031371;ubiquitin conjugating enzyme complex;0.0341876284423769!GO:0003746;translation elongation factor activity;0.0346126457244065!GO:0005545;phosphatidylinositol binding;0.0348789890951221!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0348789890951221!GO:0035023;regulation of Rho protein signal transduction;0.0353519758712094!GO:0006468;protein amino acid phosphorylation;0.0353519758712094!GO:0008090;retrograde axon cargo transport;0.0355622424575862!GO:0033596;TSC1-TSC2 complex;0.0355622424575862!GO:0033693;neurofilament bundle assembly;0.0355622424575862!GO:0006818;hydrogen transport;0.0361622180806201!GO:0030125;clathrin vesicle coat;0.0362445120808649!GO:0030665;clathrin coated vesicle membrane;0.0362445120808649!GO:0005092;GDP-dissociation inhibitor activity;0.0370102263388342!GO:0031267;small GTPase binding;0.0370102263388342!GO:0030659;cytoplasmic vesicle membrane;0.0372616374860372!GO:0030911;TPR domain binding;0.0375426955657984!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0377326178449042!GO:0045047;protein targeting to ER;0.0377326178449042!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0377326178449042!GO:0015002;heme-copper terminal oxidase activity;0.0377326178449042!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0377326178449042!GO:0004129;cytochrome-c oxidase activity;0.0377326178449042!GO:0043681;protein import into mitochondrion;0.0384539266123059!GO:0030119;AP-type membrane coat adaptor complex;0.0397373204858737!GO:0008088;axon cargo transport;0.0398202033230923!GO:0051789;response to protein stimulus;0.0398477864209686!GO:0006986;response to unfolded protein;0.0398477864209686!GO:0016859;cis-trans isomerase activity;0.0398477864209686!GO:0006974;response to DNA damage stimulus;0.039922622010928!GO:0042995;cell projection;0.0402509783698456!GO:0019911;structural constituent of myelin sheath;0.0404289817088932!GO:0001578;microtubule bundle formation;0.0404578167655581!GO:0031123;RNA 3'-end processing;0.0405822776946421!GO:0017016;Ras GTPase binding;0.0406705936222004!GO:0015992;proton transport;0.0423802257431938!GO:0046839;phospholipid dephosphorylation;0.0425546935656664!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0426249580567846!GO:0009165;nucleotide biosynthetic process;0.0426249580567846!GO:0031109;microtubule polymerization or depolymerization;0.0426249580567846!GO:0003711;transcription elongation regulator activity;0.0426354369747168!GO:0005765;lysosomal membrane;0.0426904124527388!GO:0051539;4 iron, 4 sulfur cluster binding;0.0436297250096779!GO:0019894;kinesin binding;0.0436572522638276!GO:0016579;protein deubiquitination;0.0437751432223753!GO:0004221;ubiquitin thiolesterase activity;0.0438250288469864!GO:0008312;7S RNA binding;0.0463048959285533!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.048063092447941
+|sample_id=10157
+|sample_note=
+|sample_sex=female
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=parietal lobe
+|top_motifs=DBP:4.08558100876;MYFfamily:3.93887082816;AHR_ARNT_ARNT2:3.9363225697;HOXA9_MEIS1:3.92122164427;REST:3.9098321918;NHLH1,2:3.84124506297;CUX2:3.71881782176;PRRX1,2:3.61283047121;RREB1:3.56769477543;ATF2:3.33032804636;ZFP161:3.24419868154;PRDM1:3.24177142017;MED-1{core}:3.17471384943;EGR1..3:3.12526628875;ZBTB6:2.97881613548;FOXQ1:2.93640880349;GATA4:2.83831222452;MTE{core}:2.82474485391;GTF2I:2.81280271231;OCT4_SOX2{dimer}:2.7431742371;MTF1:2.73549944166;PAX4:2.63531629799;FOXD3:2.63008510372;MZF1:2.61889232207;SOX2:2.59724113624;NKX3-2:2.56068839252;TFAP2B:2.53624813715;POU5F1:2.49233029008;FOXM1:2.48050005307;CDC5L:2.41829369066;PAX6:2.39539916377;RFX2..5_RFXANK_RFXAP:2.29898329699;RFX1:2.27254341231;POU6F1:2.26259294243;BPTF:2.22188722159;GFI1B:2.219546202;ZNF384:2.20793574025;PATZ1:2.19119438812;PAX5:2.1631006616;NFIL3:2.14739402179;ARID5B:2.12366360219;IKZF2:2.11395465688;TGIF1:2.10508273058;HIC1:2.07019174606;HMGA1,2:2.04788978528;FOXP1:2.01266409919;KLF4:1.98205459504;BREu{core}:1.87325792242;SOX{8,9,10}:1.87311989281;POU3F1..4:1.83958840302;NFIX:1.81903500705;HBP1_HMGB_SSRP1_UBTF:1.77631586915;LMO2:1.76541140823;FOX{F1,F2,J1}:1.71034585152;MAZ:1.68796488154;SMAD1..7,9:1.61561501723;NRF1:1.60685250339;SOX5:1.60520244438;HOX{A4,D4}:1.5470351033;TEF:1.53626509706;NKX6-1,2:1.47701454406;TFDP1:1.46567621881;FOXP3:1.43421362013;T:1.3805196264;ALX1:1.37620685158;EP300:1.30696383302;GCM1,2:1.2673126486;NANOG:1.25267852875;JUN:1.23316524377;STAT1,3:1.22387701195;SOX17:1.21867327739;POU1F1:1.1939317036;EBF1:1.17587680974;MAFB:1.16083475802;LEF1_TCF7_TCF7L1,2:1.15999627424;HAND1,2:1.11637427701;XBP1:1.07748107114;RBPJ:1.07286683553;ONECUT1,2:1.04040246865;ZNF143:0.9969450018;FOX{D1,D2}:0.966254909322;ADNP_IRX_SIX_ZHX:0.933310576647;FOXL1:0.920822941988;ZNF238:0.874133955281;SP1:0.857435036446;STAT2,4,6:0.856522241158;AR:0.842789077818;ZBTB16:0.838996156786;NR3C1:0.826997260669;SPZ1:0.820496149995;MYOD1:0.811348244491;TOPORS:0.801665905676;GTF2A1,2:0.691291983865;SREBF1,2:0.67997274571;NKX2-3_NKX2-5:0.678458672762;TLX1..3_NFIC{dimer}:0.673017673744;ESRRA:0.645917330808;FOXN1:0.61463033244;ZEB1:0.598397827282;TFAP2{A,C}:0.597654708914;PBX1:0.582292716655;CRX:0.56981524989;CREB1:0.51584031216;TLX2:0.515822291558;HMX1:0.50617846536;MYBL2:0.50429919472;GZF1:0.497515915358;MEF2{A,B,C,D}:0.425338666209;ATF5_CREB3:0.390331973204;AIRE:0.378965494609;UFEwm:0.360712763003;RORA:0.326053575888;GFI1:0.301302663405;FOXO1,3,4:0.233586606241;ZNF423:0.204916161862;ZIC1..3:0.175511488692;IRF7:0.141645365403;FOXA2:0.0757174511461;YY1:0.0424862438569;FOX{I1,J2}:0.0235179501448;DMAP1_NCOR{1,2}_SMARC:0.00895351454877;PAX2:-0.00835285830532;NKX3-1:-0.0168973886548;CDX1,2,4:-0.0239320062183;ATF4:-0.04700131223;HSF1,2:-0.0473015053195;NFATC1..3:-0.0712152895731;NFY{A,B,C}:-0.0815008777447;PAX3,7:-0.0981228312954;TBX4,5:-0.19387004622;IKZF1:-0.197684728477;IRF1,2:-0.205544777676;NFE2L2:-0.239417424265;HOX{A6,A7,B6,B7}:-0.269761545089;NKX2-2,8:-0.309458013609;LHX3,4:-0.31899385631;EVI1:-0.352893179741;HIF1A:-0.374862751911;PDX1:-0.378743766596;PAX1,9:-0.379721464853;SPI1:-0.438565636227;XCPE1{core}:-0.454201427984;NANOG{mouse}:-0.489654470546;SNAI1..3:-0.499451868344;VSX1,2:-0.508431841771;CEBPA,B_DDIT3:-0.510306315635;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.541381394471;NFE2:-0.573633404557;bHLH_family:-0.593401393606;NFE2L1:-0.593962262551;SPIB:-0.773790438322;ATF6:-0.828131635139;PITX1..3:-0.841707855247;GATA6:-0.857117611784;ETS1,2:-0.892440251973;HNF1A:-1.08298719315;FOSL2:-1.09780370055;BACH2:-1.09796329324;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.10061134445;TP53:-1.11527422237;PAX8:-1.1203964022;TAL1_TCF{3,4,12}:-1.15113326937;NR1H4:-1.16043439201;HNF4A_NR2F1,2:-1.16901134883;E2F1..5:-1.16962458757;TEAD1:-1.17147478625;FOS_FOS{B,L1}_JUN{B,D}:-1.17437381625;NR5A1,2:-1.27283139839;TFCP2:-1.29641899602;NFKB1_REL_RELA:-1.2990395968;POU2F1..3:-1.31651341592;RUNX1..3:-1.34097578894;TFAP4:-1.34986647471;GLI1..3:-1.4068071297;RXRA_VDR{dimer}:-1.48754516291;ALX4:-1.48816839285;ELK1,4_GABP{A,B1}:-1.51402212844;NKX2-1,4:-1.51711454897;ZNF148:-1.52000673373;HLF:-1.55388989862;ELF1,2,4:-1.55756250677;RXR{A,B,G}:-1.58633605086;PPARG:-1.62084288297;TBP:-1.68060687906;MYB:-1.75860180603;ESR1:-1.77772562245;SRF:-2.00214295858;STAT5{A,B}:-2.06802130965;HOX{A5,B5}:-2.30642319125;NR6A1:-2.36367092512;EN1,2:-2.53523135548;HES1:-2.75754948935
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10157-103A4;search_select_hide=table117:FF:10157-103A4
 }}

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FF:10157-103A4: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:23, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0