FF:10846-111E9: Difference between revisions

Latest revision as of 15:09, 3 June 2020

Name:	mesothelioma cell line:NCI-H226
Species:	Human (Homo sapiens)
Library ID:	CNhs13062
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	mesothelium
dev stage	NA
sex	male
age	unknown
cell type	mesothelial cell
cell line	NCI-H226
company	ATCC
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004855

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13062		CAGE		DRX007947		DRR008819

Accession ID Hg19

Library id		BAM		CTSS
CNhs13062		DRZ000244		DRZ001629

Accession ID Hg38

Library id		BAM		CTSS
CNhs13062		DRZ011594		DRZ012979

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.222
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.421
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.171
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0804
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0717
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0675
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0376
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.0766
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.229
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00112
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0732
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.447
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.142
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0766
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.671
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.0766
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13062

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0714
MA0003.1	MA0003.1	0.343
MA0004.1	MA0004.1	0.798
MA0006.1	MA0006.1	0.0844
MA0007.1	MA0007.1	0.884
MA0009.1	MA0009.1	0.94
MA0014.1	MA0014.1	0.949
MA0017.1	MA0017.1	0.857
MA0018.2	MA0018.2	1.52024e-4
MA0019.1	MA0019.1	0.252
MA0024.1	MA0024.1	0.0384
MA0025.1	MA0025.1	0.294
MA0027.1	MA0027.1	0.852
MA0028.1	MA0028.1	7.1718e-4
MA0029.1	MA0029.1	0.111
MA0030.1	MA0030.1	0.00415
MA0031.1	MA0031.1	8.16404e-5
MA0035.2	MA0035.2	0.0176
MA0038.1	MA0038.1	0.565
MA0039.2	MA0039.2	0.539
MA0040.1	MA0040.1	0.196
MA0041.1	MA0041.1	0.0667
MA0042.1	MA0042.1	0.0617
MA0043.1	MA0043.1	0.0132
MA0046.1	MA0046.1	0.0379
MA0047.2	MA0047.2	1.73417e-4
MA0048.1	MA0048.1	0.00181
MA0050.1	MA0050.1	0.159
MA0051.1	MA0051.1	0.901
MA0052.1	MA0052.1	4.65769e-4
MA0055.1	MA0055.1	9.27713e-4
MA0057.1	MA0057.1	0.357
MA0058.1	MA0058.1	0.924
MA0059.1	MA0059.1	0.166
MA0060.1	MA0060.1	0.778
MA0061.1	MA0061.1	0.964
MA0062.2	MA0062.2	0.0837
MA0065.2	MA0065.2	0.0849
MA0066.1	MA0066.1	0.709
MA0067.1	MA0067.1	0.00197
MA0068.1	MA0068.1	0.17
MA0069.1	MA0069.1	0.08
MA0070.1	MA0070.1	0.923
MA0071.1	MA0071.1	0.541
MA0072.1	MA0072.1	0.277
MA0073.1	MA0073.1	0.649
MA0074.1	MA0074.1	0.7
MA0076.1	MA0076.1	0.103
MA0077.1	MA0077.1	0.466
MA0078.1	MA0078.1	0.176
MA0079.2	MA0079.2	0.17
MA0080.2	MA0080.2	2.96127e-8
MA0081.1	MA0081.1	0.085
MA0083.1	MA0083.1	0.0168
MA0084.1	MA0084.1	0.368
MA0087.1	MA0087.1	0.184
MA0088.1	MA0088.1	0.0363
MA0090.1	MA0090.1	5.97981e-6
MA0091.1	MA0091.1	0.162
MA0092.1	MA0092.1	0.429
MA0093.1	MA0093.1	0.716
MA0099.2	MA0099.2	1.11382e-4
MA0100.1	MA0100.1	0.818
MA0101.1	MA0101.1	0.821
MA0102.2	MA0102.2	0.109
MA0103.1	MA0103.1	0.0355
MA0104.2	MA0104.2	0.364
MA0105.1	MA0105.1	0.964
MA0106.1	MA0106.1	0.00109
MA0107.1	MA0107.1	0.993
MA0108.2	MA0108.2	0.383
MA0111.1	MA0111.1	0.112
MA0112.2	MA0112.2	0.163
MA0113.1	MA0113.1	0.714
MA0114.1	MA0114.1	0.094
MA0115.1	MA0115.1	0.242
MA0116.1	MA0116.1	0.834
MA0117.1	MA0117.1	0.364
MA0119.1	MA0119.1	0.052
MA0122.1	MA0122.1	0.897
MA0124.1	MA0124.1	0.088
MA0125.1	MA0125.1	0.299
MA0131.1	MA0131.1	0.62
MA0135.1	MA0135.1	0.0823
MA0136.1	MA0136.1	6.14772e-6
MA0137.2	MA0137.2	0.267
MA0138.2	MA0138.2	0.0019
MA0139.1	MA0139.1	0.559
MA0140.1	MA0140.1	0.0292
MA0141.1	MA0141.1	0.944
MA0142.1	MA0142.1	0.808
MA0143.1	MA0143.1	0.373
MA0144.1	MA0144.1	0.15
MA0145.1	MA0145.1	0.482
MA0146.1	MA0146.1	0.0688
MA0147.1	MA0147.1	0.0721
MA0148.1	MA0148.1	0.0176
MA0149.1	MA0149.1	0.213
MA0150.1	MA0150.1	0.886
MA0152.1	MA0152.1	0.722
MA0153.1	MA0153.1	0.046
MA0154.1	MA0154.1	0.298
MA0155.1	MA0155.1	0.938
MA0156.1	MA0156.1	0.155
MA0157.1	MA0157.1	0.0152
MA0159.1	MA0159.1	0.0267
MA0160.1	MA0160.1	0.515
MA0162.1	MA0162.1	0.119
MA0163.1	MA0163.1	0.752
MA0164.1	MA0164.1	0.274
MA0258.1	MA0258.1	0.439
MA0259.1	MA0259.1	0.77

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13062

Novel motif	Logo	P-value
1	1	0.568
10	10	0.541
100	100	0.065
101	101	0.778
102	102	0.803
103	103	0.163
104	104	0.909
105	105	0.364
106	106	0.176
107	107	0.12
108	108	0.893
109	109	0.0358
11	11	0.516
110	110	0.047
111	111	0.778
112	112	0.783
113	113	0.0108
114	114	0.248
115	115	0.864
116	116	0.0989
117	117	0.257
118	118	0.227
119	119	0.821
12	12	0.813
120	120	0.286
121	121	0.936
122	122	0.593
123	123	0.94
124	124	0.0932
125	125	0.823
126	126	0.962
127	127	0.937
128	128	0.789
129	129	0.734
13	13	0.0191
130	130	0.968
131	131	0.88
132	132	0.584
133	133	0.0822
134	134	0.0857
135	135	0.00346
136	136	0.0135
137	137	0.0772
138	138	0.737
139	139	0.144
14	14	0.352
140	140	0.297
141	141	0.492
142	142	0.614
143	143	0.205
144	144	0.902
145	145	0.729
146	146	0.426
147	147	0.735
148	148	0.641
149	149	0.346
15	15	0.943
150	150	0.0999
151	151	0.944
152	152	0.0333
153	153	0.258
154	154	0.831
155	155	0.715
156	156	0.858
157	157	0.379
158	158	0.0128
159	159	0.467
16	16	0.283
160	160	0.227
161	161	0.154
162	162	0.577
163	163	0.945
164	164	0.0591
165	165	0.286
166	166	0.82
167	167	0.936
168	168	0.313
169	169	0.0224
17	17	0.959
18	18	0.904
19	19	0.855
2	2	0.889
20	20	0.244
21	21	0.00383
22	22	0.819
23	23	0.0361
24	24	0.187
25	25	0.345
26	26	0.481
27	27	0.9
28	28	0.157
29	29	0.26
3	3	0.655
30	30	0.552
31	31	0.497
32	32	0.389
33	33	0.459
34	34	0.746
35	35	0.705
36	36	0.667
37	37	0.17
38	38	0.841
39	39	0.349
4	4	0.535
40	40	0.515
41	41	0.0091
42	42	0.666
43	43	0.0924
44	44	0.48
45	45	0.975
46	46	0.83
47	47	0.489
48	48	0.224
49	49	0.16
5	5	0.0832
50	50	0.467
51	51	0.518
52	52	0.596
53	53	0.882
54	54	0.399
55	55	0.614
56	56	0.476
57	57	0.0838
58	58	0.287
59	59	0.488
6	6	0.833
60	60	0.991
61	61	0.443
62	62	0.37
63	63	0.279
64	64	0.804
65	65	0.553
66	66	0.0306
67	67	0.717
68	68	0.849
69	69	0.109
7	7	0.793
70	70	0.951
71	71	0.0901
72	72	0.202
73	73	0.143
74	74	0.834
75	75	0.526
76	76	0.174
77	77	0.0555
78	78	0.154
79	79	0.568
8	8	0.249
80	80	0.0786
81	81	0.375
82	82	0.717
83	83	0.759
84	84	0.986
85	85	0.0459
86	86	0.583
87	87	0.0108
88	88	0.268
89	89	0.275
9	9	0.225
90	90	0.227
91	91	0.187
92	92	0.0489
93	93	0.697
94	94	0.494
95	95	0.132
96	96	0.583
97	97	0.823
98	98	0.653
99	99	0.379

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13062

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102424 mesothelioma cell line sample
FF:0103008 NCI-H226 cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
0050615 (respiratory system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1324 (lung cancer)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004802 (respiratory tract epithelium)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0000115 (lung epithelium)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0100353 (lung cell line sample)
0101120 (epithelial cell line sample)
0100762 (lung cancer cell line sample)
0102553 (non-small cell lung cancer cell line sample)
0102424 (mesothelioma cell line sample)
0103008 (NCI-H226 cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000222 (mesodermal cell)
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS007841
+|DRA_sample_Accession=CAGE@SAMD00004855
-|accession_numbers=CAGE;DRX007947;DRR008819;DRZ000244;DRZ001629
+|accession_numbers=CAGE;DRX007947;DRR008819;DRZ000244;DRZ001629;DRZ011594;DRZ012979
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002048,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000064,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004802,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0005178,UBERON:0000072,UBERON:0005177,UBERON:0004807,UBERON:0000117,UBERON:0000171,UBERON:0000115,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000082,CL:0000255,CL:0000077
@@ Line 9: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr11:61520075..61520136,+!p1@C11orf9!1.84!140.06!C11orf9;;chr15:83953397..83953425,-!p1@BNC1!1.76!64.63!BNC1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.55!34.53!SEBOX;;chr6:10415276..10415341,-!p2@TFAP2A!1.53!39.93!TFAP2A;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.50!30.67!SEBOX;;chr7:27153454..27153469,-!p2@HOXA3!1.38!22.96!HOXA3;;chr11:32457075..32457095,-!p1@WT1!1.33!20.26!WT1;;chr18:19749541..19749557,+!p1@GATA6!1.32!61.73!GATA6;;chr6:10412600..10412637,-!p1@TFAP2A!1.32!32.80!TFAP2A;;chr8:37963466..37963506,+!p3@ASH2L!1.27!21.80!ASH2L;;chr4:87857474..87857489,+!p7@AFF1!1.21!26.24!AFF1;;chr6:34204921..34204939,+!p3@HMGA1!1.14!385.06!HMGA1;;chr18:19749386..19749404,+!p2@GATA6!1.13!17.94!GATA6;;chr6:10412392..10412409,-!p4@TFAP2A!1.12!14.08!TFAP2A;;chr11:65667884..65667895,-!p2@FOSL1!1.11!45.72!FOSL1;;chr11:65686802..65686818,+!p6@DRAP1!1.11!20.83!DRAP1;;chr1:158985493..158985535,+!p4@IFI16!1.10!17.75!IFI16;;chr7:26191809..26191890,+!p1@NFE2L3!1.05!51.32!NFE2L3;;chr6:126240380..126240430,+!p2@NCOA7!1.05!26.62!NCOA7;;chr8:11561684..11561751,+!p1@GATA4!1.04!10.03!GATA4;;chr12:80084167..80084197,-!p5@PAWR!1.02!22.76!PAWR;;chr15:67418047..67418093,+!p4@SMAD3!1.01!11.77!SMAD3;;chr16:67881588..67881612,-!p2@CENPT!1.00!12.54!CENPT;;chrY:2803415..2803468,+!p1@ZFY!1.00!9.07!ZFY;;chr8:106330656..106330684,+!p1@ZFPM2!0.98!23.15!ZFPM2;;chr7:101917447..101917479,+!p4@CUX1!0.97!8.30!CUX1;;chr11:65687243..65687276,+!p8@DRAP1!0.95!10.80!DRAP1;;chr11:120107344..120107351,+!p1@POU2F3!0.95!9.65!POU2F3;;chr15:67418177..67418204,+!p9@SMAD3!0.95!7.91!SMAD3;;chr11:65667846..65667868,-!p1@FOSL1!0.94!209.50!FOSL1;;chr7:27142290..27142310,-!p1@HOXA2!0.94!7.72!HOXA2;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!0.94!7.72!SEBOX;;chr15:83953373..83953386,-!p2@BNC1!0.92!7.33!BNC1;;chr15:67418119..67418162,+!p5@SMAD3!0.90!7.72!SMAD3;;chr11:65686732..65686756,+!p2@DRAP1!0.89!29.90!DRAP1;;chr17:46622070..46622109,-!p1@HOXB2!0.89!15.63!HOXB2;;chr3:141121847..141121868,+!p5@ZBTB38!0.89!10.42!ZBTB38;;chr5:2751762..2751784,-!p1@IRX2!0.89!6.75!IRX2;;chr7:19157043..19157088,-!p2@TWIST1!0.88!17.36!TWIST1;;chr19:12203100..12203132,+!p1@ZNF788!0.87!13.50!ZNF788;;chr11:65687222..65687240,+!p7@DRAP1!0.86!8.10!DRAP1;;chr6:10415263..10415274,-!p8@TFAP2A!0.86!6.17!TFAP2A;;chr5:72744594..72744609,-!p1@FOXD1!0.85!29.71!FOXD1;;chr6:1389789..1389821,+!p1@FOXF2!0.85!8.49!FOXF2;;chr5:134369905..134369972,-!p1@PITX1!0.84!9.26!PITX1;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.98!KDM5D;;chr6:19837592..19837621,+!p1@ID4!0.82!36.46!ID4;;chr18:19749517..19749531,+!p3@GATA6!0.82!10.42!GATA6;;chr15:37392094..37392116,-!p6@MEIS2!0.82!7.14!MEIS2;;chr17:7493405..7493419,-!p1@SOX15!0.81!5.40!SOX15;;chr7:27183263..27183284,-!p2@HOXA5!0.81!5.40!HOXA5;;chr12:8186270..8186292,+!p3@FOXJ2!0.81!5.40!FOXJ2;;chr1:6479968..6479986,-!p1@HES2!0.81!5.40!HES2;;chr12:80084137..80084165,-!p10@PAWR!0.80!6.94!PAWR;;chr6:126240442..126240459,+!p4@NCOA7!0.80!6.94!NCOA7;;chr11:65687362..65687436,+!p3@DRAP1!0.79!25.66!DRAP1;;chr12:80084737..80084763,-!p3@PAWR!0.79!20.83!PAWR;;chr6:85473156..85473210,-!p2@TBX18!0.79!6.37!TBX18;;chr20:42295745..42295765,+!p1@MYBL2!0.77!87.00!MYBL2;;chr6:126240356..126240379,+!p7@NCOA7!0.76!5.98!NCOA7;;chr2:46524897..46524911,+!p2@EPAS1!0.75!13.89!EPAS1;;chr17:46622114..46622138,-!p4@HOXB2!0.75!7.33!HOXB2;;chr6:28321909..28321965,-!p3@ZNF323!0.75!4.63!ZNF323;;chr8:67525443..67525459,-!p2@MYBL1!0.74!6.94!MYBL1;;chr6:10412576..10412599,-!p5@TFAP2A!0.74!4.44!TFAP2A;;chr7:101917482..101917507,+!p6@CUX1!0.74!4.44!CUX1;;chr17:46703687..46703740,-!p1@HOXB9!0.74!4.44!HOXB9;;chr10:51572408..51572454,+!p3@NCOA4!0.73!28.55!NCOA4;;chr8:37963407..37963454,+!p2@ASH2L!0.72!13.89!ASH2L;;chr4:87857491..87857519,+!p10@AFF1!0.72!6.17!AFF1;;chr6:126240463..126240489,+!p6@NCOA7!0.72!4.82!NCOA7;;chr7:27153428..27153440,-!p3@HOXA3!0.72!4.24!HOXA3;;chr8:106330696..106330719,+!p2@ZFPM2!0.71!5.40!ZFPM2;;chr5:72744445..72744466,-!p2@FOXD1!0.70!7.14!FOXD1;;chr5:43067636..43067674,+!p6@ZNF131!0.70!5.59!ZNF131;;chr1:158985469..158985489,+!p7@IFI16!0.70!4.82!IFI16;;chr7:101917407..101917443,+!p3@CUX1!0.70!4.05!CUX1;;chr3:111314186..111314204,-!p1@ZBED2!0.70!4.05!ZBED2;;chr11:32456954..32456965,-!p4@WT1!0.70!4.05!WT1;;chr12:124873357..124873401,-!p1@NCOR2!0.69!51.89!NCOR2;;chr18:6414884..6414942,-!p1@L3MBTL4!0.69!5.02!L3MBTL4;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.69!3.86!HOXC5;;chr6:34204672..34204692,+!p1@HMGA1!0.68!493.09!HMGA1;;chr15:67358163..67358192,+!p1@SMAD3!0.68!101.47!SMAD3;;chr3:128206762..128206781,-!p2@GATA2!0.68!26.82!GATA2;;chr12:124873852..124873881,-!p3@NCOR2!0.68!26.24!NCOR2;;chr12:7079780..7079791,-!p2@PHB2!0.68!22.76!PHB2;;chr11:32457103..32457123,-!p3@WT1!0.67!3.67!WT1;;chr2:74730087..74730102,-!p4@LBX2!0.67!3.67!LBX2;;chr14:21566731..21566836,-!p1@ZNF219!0.66!44.18!ZNF219;;chr19:53193731..53193767,-!p1@ZNF83!0.66!36.85!ZNF83;;chr12:3068544..3068597,+!p1@TEAD4!0.65!24.31!TEAD4;;chr15:96874244..96874259,+!p5@NR2F2!0.65!9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@@ Line 40: / Line 41: @@
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@@ Line 50: / Line 60: @@
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@@ Line 64: / Line 75: @@
 |rna_rin=
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 |sample_age=unknown
@@ Line 89: / Line 100: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10846-111E9;search_select_hide=table117:FF:10846-111E9
 }}

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FF:10846-111E9: Difference between revisions

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Latest revision as of 15:09, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0