FF:11263-116G3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005941 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005941 | ||
|accession_numbers=CAGE;DRX008217;DRR009089;DRZ000514;DRZ001899;DRZ011864;DRZ013249 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037000;DRR041366;DRZ007008 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000947,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0004573,UBERON:0000487,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001917,UBERON:0004535,UBERON:0004571,UBERON:0010191,UBERON:0004572,UBERON:0004537,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413,CL:0002544 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000047,FF:0000048,FF:0000001 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.41!335.49!SOX18;;chr21:39870339..39870443,-!p1@ERG!1.95!87.74!ERG;;chr8:55370487..55370503,+!p1@SOX17!1.93!83.44!SOX17;;chr8:10588010..10588030,-!p1@SOX7!1.71!50.75!SOX7;;chr1:6479968..6479986,-!p1@HES2!1.64!43.01!HES2;;chr6:34204921..34204939,+!p3@HMGA1!1.60!1105.40!HMGA1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.60!38.71!ZBED1;;chr17:6926362..6926377,+!p1@BCL6B!1.57!36.13!BCL6B;;chr19:13213511..13213545,-!p2@LYL1!1.51!34.41!LYL1;;chr18:53068911..53068935,-!p4@TCF4!1.42!28.39!TCF4;;chr12:96588368..96588394,+!p3@ELK3!1.25!44.73!ELK3;;chr10:94449703..94449718,+!p1@HHEX!1.13!48.17!HHEX;;chr19:13213662..13213686,-!p1@LYL1!1.10!17.20!LYL1;;chr19:13213399..13213414,-!p6@LYL1!1.09!11.18!LYL1;;chr18:22932080..22932170,-!p1@ZNF521!1.08!47.31!ZNF521;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.67!FOXC2;;chr19:13213555..13213568,-!p5@LYL1!1.02!9.46!LYL1;;chr2:239756671..239756732,+!p1@TWIST2!1.01!30.11!TWIST2;;chr11:65429891..65429915,-!p7@RELA!0.98!8.60!RELA;;chr4:174451370..174451387,-!p1@HAND2!0.90!6.88!HAND2;;chr17:46655672..46655697,-!p3@HOXB4!0.90!6.88!HOXB4;;chr19:13213465..13213478,-!p7@LYL1!0.90!6.88!LYL1;;chr8:11561684..11561751,+!p1@GATA4!0.90!6.88!GATA4;;chr1:170632285..170632309,+!p1@PRRX1!0.89!7.74!PRRX1;;chr7:115670804..115670825,-!p1@TFEC!0.85!6.02!TFEC;;chr7:35293685..35293718,-!p1@TBX20!0.85!6.02!TBX20;;chr4:174450089..174450153,-!p2@HAND2!0.85!6.02!HAND2;;chr15:83953397..83953425,-!p1@BNC1!0.84!6.88!BNC1;;chr3:128206762..128206781,-!p2@GATA2!0.83!38.71!GATA2;;chr17:41622925..41622976,-!p3@ETV4!0.82!8.60!ETV4;;chr17:46655704..46655718,-!p2@HOXB4!0.82!8.60!HOXB4;;chr6:34204672..34204692,+!p1@HMGA1!0.81!668.40!HMGA1;;chr20:42543441..42543497,+!p1@TOX2!0.80!25.81!TOX2;;chr9:35732514..35732530,+!p5@CREB3!0.80!7.74!CREB3;;chr11:65687222..65687240,+!p7@DRAP1!0.80!6.88!DRAP1;;chr6:126070769..126070801,+!p1@HEY2!0.79!6.02!HEY2;;chr19:46801639..46801699,+!p1@HIF3A!0.79!5.16!HIF3A;;chr7:26191809..26191890,+!p1@NFE2L3!0.76!25.81!NFE2L3;;chr17:41623692..41623715,-!p1@ETV4!0.76!22.37!ETV4;;chr11:65430554..65430579,-!p3@RELA!0.76!12.90!RELA;;chr11:65686802..65686818,+!p6@DRAP1!0.76!8.60!DRAP1;;chr20:42543506..42543549,+!p2@TOX2!0.75!12.04!TOX2;;chr12:66218255..66218304,+!p3@HMGA2!0.73!12.90!HMGA2;;chr10:31288398..31288455,-!p2@ZNF438!0.73!5.16!ZNF438;;chr17:1958388..1958404,+!p1@HIC1!0.72!30.11!HIC1;;chr11:65667884..65667895,-!p2@FOSL1!0.72!18.06!FOSL1;;chr3:169381420..169381535,-!p1@MECOM!0.72!5.16!MECOM;;chr22:19748231..19748317,+!p1@TBX1!0.72!4.30!TBX1;;chr17:8027418..8027432,-!p1@HES7!0.72!4.30!HES7;;chr9:16705069..16705086,-!p3@BNC2!0.72!4.30!BNC2;;chr11:65667846..65667868,-!p1@FOSL1!0.71!123.01!FOSL1;;chr6:34204973..34204990,+!p4@HMGA1!0.71!61.94!HMGA1;;chr6:10415276..10415341,-!p2@TFAP2A!0.71!5.16!TFAP2A;;chr20:6748325..6748352,+!p1@BMP2!0.70!6.02!BMP2;;chr17:41623667..41623682,-!p8@ETV4!0.70!4.30!ETV4;;chr1:151032860..151032918,+!p1@MLLT11!0.69!52.47!MLLT11;;chr6:10412600..10412637,-!p1@TFAP2A!0.69!6.88!TFAP2A;;chr11:65687362..65687436,+!p3@DRAP1!0.67!18.93!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!0.67!4.30!PRRX1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.66!296.78!TAX1BP3;;chr13:41240717..41240735,-!p2@FOXO1!0.66!28.39!FOXO1;;chr7:19157248..19157268,-!p1@TWIST1!0.66!11.18!TWIST1;;chr9:14314131..14314147,-!p2@NFIB!0.65!22.37!NFIB;;chr10:31288370..31288393,-!p3@ZNF438!0.65!3.44!ZNF438;;chr3:25470156..25470227,+!p2@RARB!0.65!3.44!RARB;;chr6:28321971..28321995,-!p1@ZNF323!0.65!3.44!ZNF323;;chr8:25902876..25902936,-!p1@EBF2!0.65!3.44!EBF2;;chr18:53068982..53068993,-!p20@TCF4!0.65!3.44!TCF4;;chr19:13213496..13213501,-!p10@LYL1!0.65!3.44!LYL1;;chr6:21593973..21593988,+!p1@SOX4!0.64!141.94!SOX4;;chr2:19558373..19558392,-!p1@OSR1!0.64!10.32!OSR1;;chr3:25469724..25469773,+!p1@RARB!0.64!5.16!RARB;;chr3:178789522..178789564,-!p2@ZMAT3!0.63!28.39!ZMAT3;;chr8:128748308..128748324,+!p2@MYC!0.62!105.81!MYC;;chr11:128563948..128564003,+!p1@FLI1!0.62!45.59!FLI1;;chr3:168865194..168865245,-!p3@MECOM!0.62!4.30!MECOM;;chr6:85474299..85474324,-!p1@TBX18!0.61!6.02!TBX18;;chr3:170076314..170076334,+!p2@SKIL!0.61!4.30!SKIL;;chr20:50721803..50721857,-!p2@ZFP64!0.60!5.16!ZFP64;;chr11:65686732..65686756,+!p2@DRAP1!0.59!14.62!DRAP1;;chr2:74730430..74730451,-!p1@LBX2!0.59!5.16!LBX2;;chr3:168864315..168864339,-!p2@MECOM!0.59!5.16!MECOM;;chr10:31607702..31607755,+!p3@ZEB1!0.59!3.44!ZEB1;;chr4:2263809..2263854,-!p1@MXD4!0.58!134.20!MXD4;;chr22:38597987..38598021,+!p2@MAFF!0.58!20.65!MAFF;;chr6:34205372..34205412,+!p5@HMGA1!0.58!17.20!HMGA1;;chr18:19749541..19749557,+!p1@GATA6!0.58!10.32!GATA6;;chr17:7590797..7590815,-!p1@TP53!0.57!146.24!TP53;;chr19:49865646..49865718,-!p1@TEAD2!0.57!28.39!TEAD2;;chr10:94449675..94449694,+!p2@HHEX!0.57!8.60!HHEX;;chr3:141105705..141105770,+!p4@ZBTB38!0.57!3.44!ZBTB38;;chr19:45908292..45908374,-!p1@PPP1R13L!0.56!29.25!PPP1R13L;;chr11:65479462..65479517,+!p2@KAT5!0.56!12.90!KAT5;;chr20:42295745..42295765,+!p1@MYBL2!0.55!52.47!MYBL2;;chr6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| |expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.41!335.49!SOX18;;chr21:39870339..39870443,-!p1@ERG!1.95!87.74!ERG;;chr8:55370487..55370503,+!p1@SOX17!1.93!83.44!SOX17;;chr8:10588010..10588030,-!p1@SOX7!1.71!50.75!SOX7;;chr1:6479968..6479986,-!p1@HES2!1.64!43.01!HES2;;chr6:34204921..34204939,+!p3@HMGA1!1.60!1105.40!HMGA1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.60!38.71!ZBED1;;chr17:6926362..6926377,+!p1@BCL6B!1.57!36.13!BCL6B;;chr19:13213511..13213545,-!p2@LYL1!1.51!34.41!LYL1;;chr18:53068911..53068935,-!p4@TCF4!1.42!28.39!TCF4;;chr12:96588368..96588394,+!p3@ELK3!1.25!44.73!ELK3;;chr10:94449703..94449718,+!p1@HHEX!1.13!48.17!HHEX;;chr19:13213662..13213686,-!p1@LYL1!1.10!17.20!LYL1;;chr19:13213399..13213414,-!p6@LYL1!1.09!11.18!LYL1;;chr18:22932080..22932170,-!p1@ZNF521!1.08!47.31!ZNF521;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.67!FOXC2;;chr19:13213555..13213568,-!p5@LYL1!1.02!9.46!LYL1;;chr2:239756671..239756732,+!p1@TWIST2!1.01!30.11!TWIST2;;chr11:65429891..65429915,-!p7@RELA!0.98!8.60!RELA;;chr4:174451370..174451387,-!p1@HAND2!0.90!6.88!HAND2;;chr17:46655672..46655697,-!p3@HOXB4!0.90!6.88!HOXB4;;chr19:13213465..13213478,-!p7@LYL1!0.90!6.88!LYL1;;chr8:11561684..11561751,+!p1@GATA4!0.90!6.88!GATA4;;chr1:170632285..170632309,+!p1@PRRX1!0.89!7.74!PRRX1;;chr7:115670804..115670825,-!p1@TFEC!0.85!6.02!TFEC;;chr7:35293685..35293718,-!p1@TBX20!0.85!6.02!TBX20;;chr4:174450089..174450153,-!p2@HAND2!0.85!6.02!HAND2;;chr15:83953397..83953425,-!p1@BNC1!0.84!6.88!BNC1;;chr3:128206762..128206781,-!p2@GATA2!0.83!38.71!GATA2;;chr17:41622925..41622976,-!p3@ETV4!0.82!8.60!ETV4;;chr17:46655704..46655718,-!p2@HOXB4!0.82!8.60!HOXB4;;chr6:34204672..34204692,+!p1@HMGA1!0.81!668.40!HMGA1;;chr20:42543441..42543497,+!p1@TOX2!0.80!25.81!TOX2;;chr9:35732514..35732530,+!p5@CREB3!0.80!7.74!CREB3;;chr11:65687222..65687240,+!p7@DRAP1!0.80!6.88!DRAP1;;chr6:126070769..126070801,+!p1@HEY2!0.79!6.02!HEY2;;chr19:46801639..46801699,+!p1@HIF3A!0.79!5.16!HIF3A;;chr7:26191809..26191890,+!p1@NFE2L3!0.76!25.81!NFE2L3;;chr17:41623692..41623715,-!p1@ETV4!0.76!22.37!ETV4;;chr11:65430554..65430579,-!p3@RELA!0.76!12.90!RELA;;chr11:65686802..65686818,+!p6@DRAP1!0.76!8.60!DRAP1;;chr20:42543506..42543549,+!p2@TOX2!0.75!12.04!TOX2;;chr12:66218255..66218304,+!p3@HMGA2!0.73!12.90!HMGA2;;chr10:31288398..31288455,-!p2@ZNF438!0.73!5.16!ZNF438;;chr17:1958388..1958404,+!p1@HIC1!0.72!30.11!HIC1;;chr11:65667884..65667895,-!p2@FOSL1!0.72!18.06!FOSL1;;chr3:169381420..169381535,-!p1@MECOM!0.72!5.16!MECOM;;chr22:19748231..19748317,+!p1@TBX1!0.72!4.30!TBX1;;chr17:8027418..8027432,-!p1@HES7!0.72!4.30!HES7;;chr9:16705069..16705086,-!p3@BNC2!0.72!4.30!BNC2;;chr11:65667846..65667868,-!p1@FOSL1!0.71!123.01!FOSL1;;chr6:34204973..34204990,+!p4@HMGA1!0.71!61.94!HMGA1;;chr6:10415276..10415341,-!p2@TFAP2A!0.71!5.16!TFAP2A;;chr20:6748325..6748352,+!p1@BMP2!0.70!6.02!BMP2;;chr17:41623667..41623682,-!p8@ETV4!0.70!4.30!ETV4;;chr1:151032860..151032918,+!p1@MLLT11!0.69!52.47!MLLT11;;chr6:10412600..10412637,-!p1@TFAP2A!0.69!6.88!TFAP2A;;chr11:65687362..65687436,+!p3@DRAP1!0.67!18.93!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!0.67!4.30!PRRX1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.66!296.78!TAX1BP3;;chr13:41240717..41240735,-!p2@FOXO1!0.66!28.39!FOXO1;;chr7:19157248..19157268,-!p1@TWIST1!0.66!11.18!TWIST1;;chr9:14314131..14314147,-!p2@NFIB!0.65!22.37!NFIB;;chr10:31288370..31288393,-!p3@ZNF438!0.65!3.44!ZNF438;;chr3:25470156..25470227,+!p2@RARB!0.65!3.44!RARB;;chr6:28321971..28321995,-!p1@ZNF323!0.65!3.44!ZNF323;;chr8:25902876..25902936,-!p1@EBF2!0.65!3.44!EBF2;;chr18:53068982..53068993,-!p20@TCF4!0.65!3.44!TCF4;;chr19:13213496..13213501,-!p10@LYL1!0.65!3.44!LYL1;;chr6:21593973..21593988,+!p1@SOX4!0.64!141.94!SOX4;;chr2:19558373..19558392,-!p1@OSR1!0.64!10.32!OSR1;;chr3:25469724..25469773,+!p1@RARB!0.64!5.16!RARB;;chr3:178789522..178789564,-!p2@ZMAT3!0.63!28.39!ZMAT3;;chr8:128748308..128748324,+!p2@MYC!0.62!105.81!MYC;;chr11:128563948..128564003,+!p1@FLI1!0.62!45.59!FLI1;;chr3:168865194..168865245,-!p3@MECOM!0.62!4.30!MECOM;;chr6:85474299..85474324,-!p1@TBX18!0.61!6.02!TBX18;;chr3:170076314..170076334,+!p2@SKIL!0.61!4.30!SKIL;;chr20:50721803..50721857,-!p2@ZFP64!0.60!5.16!ZFP64;;chr11:65686732..65686756,+!p2@DRAP1!0.59!14.62!DRAP1;;chr2:74730430..74730451,-!p1@LBX2!0.59!5.16!LBX2;;chr3:168864315..168864339,-!p2@MECOM!0.59!5.16!MECOM;;chr10:31607702..31607755,+!p3@ZEB1!0.59!3.44!ZEB1;;chr4:2263809..2263854,-!p1@MXD4!0.58!134.20!MXD4;;chr22:38597987..38598021,+!p2@MAFF!0.58!20.65!MAFF;;chr6:34205372..34205412,+!p5@HMGA1!0.58!17.20!HMGA1;;chr18:19749541..19749557,+!p1@GATA6!0.58!10.32!GATA6;;chr17:7590797..7590815,-!p1@TP53!0.57!146.24!TP53;;chr19:49865646..49865718,-!p1@TEAD2!0.57!28.39!TEAD2;;chr10:94449675..94449694,+!p2@HHEX!0.57!8.60!HHEX;;chr3:141105705..141105770,+!p4@ZBTB38!0.57!3.44!ZBTB38;;chr19:45908292..45908374,-!p1@PPP1R13L!0.56!29.25!PPP1R13L;;chr11:65479462..65479517,+!p2@KAT5!0.56!12.90!KAT5;;chr20:42295745..42295765,+!p1@MYBL2!0.55!52.47!MYBL2;;chr6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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000071;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000115;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002139;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002544;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:1000413;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000487;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000947;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001637;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001981;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004573;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0006914;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798 | |||
|ffid_belonging_in_development=CL:0002546,CL:0000222 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor1.CNhs12495.11263-116G3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor1.CNhs12495.11263-116G3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor1.CNhs12495.11263-116G3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor1.CNhs12495.11263-116G3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Aortic%252c%2520donor1.CNhs12495.11263-116G3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11263-116G3 | |id=FF:11263-116G3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000048 | ||
|is_obsolete= | |||
|library_id=CNhs12495 | |||
|library_id_phase_based=2:CNhs12495 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11263 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10002.AGTCAA.11263 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11263 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10002.AGTCAA.11263 | |||
|name=Endothelial Cells - Aortic, donor1 | |name=Endothelial Cells - Aortic, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12495,LSID916,release011,COMPLETED | |profile_hcage=CNhs12495,LSID916,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10002,,, | |profile_srnaseq=SRhi10002,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=CA304-R10a | |rna_catalog_number=CA304-R10a | ||
| Line 56: | Line 82: | ||
|rna_tube_id=116G3 | |rna_tube_id=116G3 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10002.AGTCAA | |||
|sample_age=28 | |sample_age=28 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.40688189849202e-213!GO:0005737;cytoplasm;8.12166598849322e-199!GO:0043226;organelle;2.20242359745233e-162!GO:0043229;intracellular organelle;3.72623794278286e-162!GO:0043231;intracellular membrane-bound organelle;2.94339027685888e-156!GO:0043227;membrane-bound organelle;6.84300027736776e-156!GO:0044444;cytoplasmic part;9.08325178153939e-142!GO:0044422;organelle part;3.23152106496747e-135!GO:0044446;intracellular organelle part;6.52604924890608e-134!GO:0032991;macromolecular complex;2.38723609538715e-92!GO:0005515;protein binding;4.5246250162841e-86!GO:0030529;ribonucleoprotein complex;1.14057314844365e-83!GO:0005739;mitochondrion;1.23562940314187e-76!GO:0044237;cellular metabolic process;3.8782508340404e-75!GO:0044238;primary metabolic process;1.78564994345983e-73!GO:0043233;organelle lumen;3.61006800027894e-68!GO:0031974;membrane-enclosed lumen;3.61006800027894e-68!GO:0043170;macromolecule metabolic process;8.19640377526156e-64!GO:0003723;RNA binding;4.33354807577248e-62!GO:0044428;nuclear part;1.82906984272822e-60!GO:0005840;ribosome;3.77763171885177e-55!GO:0019538;protein metabolic process;3.87046726644717e-54!GO:0031090;organelle membrane;2.70627616643835e-51!GO:0006412;translation;3.19783618216995e-51!GO:0044429;mitochondrial part;1.0427135867989e-50!GO:0044260;cellular macromolecule metabolic process;4.04386937014156e-49!GO:0044267;cellular protein metabolic process;7.52067211470362e-49!GO:0003735;structural constituent of ribosome;2.458432122024e-48!GO:0005634;nucleus;2.77782247380965e-48!GO:0043234;protein complex;7.08163587910938e-46!GO:0016043;cellular component organization and biogenesis;8.89233295553745e-46!GO:0009058;biosynthetic process;6.73508902435898e-45!GO:0044249;cellular biosynthetic process;3.18087025582529e-44!GO:0031967;organelle envelope;5.5022398668757e-44!GO:0031975;envelope;1.34141409786843e-43!GO:0006396;RNA processing;3.3679904395556e-43!GO:0005829;cytosol;2.14832435784612e-41!GO:0033279;ribosomal subunit;2.74217552671588e-41!GO:0009059;macromolecule biosynthetic process;4.01973475577011e-40!GO:0031981;nuclear lumen;4.63877297854879e-38!GO:0015031;protein transport;5.73093475498254e-38!GO:0033036;macromolecule localization;3.61238141774552e-37!GO:0045184;establishment of protein localization;3.87710139800196e-35!GO:0008104;protein localization;8.43590228451448e-35!GO:0043228;non-membrane-bound organelle;2.06719553539261e-34!GO:0043232;intracellular non-membrane-bound organelle;2.06719553539261e-34!GO:0005740;mitochondrial envelope;8.89204826000339e-34!GO:0046907;intracellular transport;9.47054133984436e-33!GO:0031966;mitochondrial membrane;7.53513983965484e-32!GO:0016071;mRNA metabolic process;7.53513983965484e-32!GO:0006996;organelle organization and biogenesis;3.57991613554952e-31!GO:0019866;organelle inner membrane;6.82636694605703e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.87260984256191e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.37047854209482e-29!GO:0008380;RNA splicing;1.09530980667187e-28!GO:0043283;biopolymer metabolic process;1.84921330474485e-28!GO:0005743;mitochondrial inner membrane;3.33315135245946e-28!GO:0065003;macromolecular complex assembly;7.8407981064891e-28!GO:0006397;mRNA processing;8.85692993092271e-28!GO:0006886;intracellular protein transport;9.14981747772818e-27!GO:0022607;cellular component assembly;7.27020674947965e-25!GO:0010467;gene expression;1.7997180494525e-23!GO:0044445;cytosolic part;1.91706709370162e-23!GO:0006119;oxidative phosphorylation;2.38486966111614e-22!GO:0005654;nucleoplasm;3.46616520738807e-22!GO:0006259;DNA metabolic process;4.09119908545344e-22!GO:0044455;mitochondrial membrane part;5.87721221417631e-22!GO:0015934;large ribosomal subunit;5.87721221417631e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.0074369658654e-22!GO:0000166;nucleotide binding;1.2917880258462e-21!GO:0051649;establishment of cellular localization;3.9404012576477e-21!GO:0031980;mitochondrial lumen;4.45024356141738e-21!GO:0005759;mitochondrial matrix;4.45024356141738e-21!GO:0005681;spliceosome;5.67055258671919e-21!GO:0051641;cellular localization;6.24675849400104e-21!GO:0015935;small ribosomal subunit;2.21372406401686e-20!GO:0012505;endomembrane system;5.59692040596159e-20!GO:0007049;cell cycle;9.34835952654388e-20!GO:0016462;pyrophosphatase activity;1.86322734797767e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.22101227828508e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.957150946669e-19!GO:0005783;endoplasmic reticulum;4.32814472606307e-19!GO:0017111;nucleoside-triphosphatase activity;1.27419919000582e-18!GO:0006457;protein folding;1.52547649306538e-18!GO:0044451;nucleoplasm part;5.22924258594588e-18!GO:0005746;mitochondrial respiratory chain;7.19601517623633e-18!GO:0016874;ligase activity;1.2014506025226e-17!GO:0005730;nucleolus;1.36742786593901e-17!GO:0048770;pigment granule;4.07265600011914e-17!GO:0042470;melanosome;4.07265600011914e-17!GO:0051186;cofactor metabolic process;7.42578876848389e-17!GO:0017076;purine nucleotide binding;3.51760821017504e-16!GO:0005794;Golgi apparatus;4.85714819987649e-16!GO:0000502;proteasome complex (sensu Eukaryota);6.53130462928995e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.74770583071604e-16!GO:0032553;ribonucleotide binding;9.4463564455235e-16!GO:0032555;purine ribonucleotide binding;9.4463564455235e-16!GO:0005761;mitochondrial ribosome;1.07289325812718e-15!GO:0000313;organellar ribosome;1.07289325812718e-15!GO:0022618;protein-RNA complex assembly;1.23224304594916e-15!GO:0008134;transcription factor binding;1.68123901306909e-15!GO:0044265;cellular macromolecule catabolic process;1.88816551302378e-15!GO:0022402;cell cycle process;1.94105490365724e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.90824895057875e-15!GO:0044432;endoplasmic reticulum part;3.66016696962189e-15!GO:0050136;NADH dehydrogenase (quinone) activity;3.66901637469004e-15!GO:0003954;NADH dehydrogenase activity;3.66901637469004e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.66901637469004e-15!GO:0043285;biopolymer catabolic process;5.73443782106489e-15!GO:0009057;macromolecule catabolic process;7.40252310894207e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.39662678294332e-14!GO:0006605;protein targeting;1.62321182667014e-14!GO:0006512;ubiquitin cycle;2.63741487606715e-14!GO:0043412;biopolymer modification;2.72781639302824e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.17521920858473e-14!GO:0044248;cellular catabolic process;3.28917689371544e-14!GO:0051082;unfolded protein binding;1.16471693908542e-13!GO:0000278;mitotic cell cycle;1.22683488337256e-13!GO:0042254;ribosome biogenesis and assembly;1.88213574442847e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.96656304147028e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.06218725983837e-13!GO:0042773;ATP synthesis coupled electron transport;2.06218725983837e-13!GO:0019941;modification-dependent protein catabolic process;2.83891780820888e-13!GO:0043632;modification-dependent macromolecule catabolic process;2.83891780820888e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;3.0119063575947e-13!GO:0000375;RNA splicing, via transesterification reactions;3.0119063575947e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.0119063575947e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.05128863847406e-13!GO:0045271;respiratory chain complex I;3.05128863847406e-13!GO:0005747;mitochondrial respiratory chain complex I;3.05128863847406e-13!GO:0016192;vesicle-mediated transport;3.51868408777413e-13!GO:0044257;cellular protein catabolic process;3.59044371223708e-13!GO:0008135;translation factor activity, nucleic acid binding;3.92437855776973e-13!GO:0006511;ubiquitin-dependent protein catabolic process;4.28137228222973e-13!GO:0030163;protein catabolic process;5.52685800386629e-13!GO:0006464;protein modification process;5.92685385350679e-13!GO:0012501;programmed cell death;7.27814816007868e-13!GO:0030554;adenyl nucleotide binding;8.635253023666e-13!GO:0006915;apoptosis;1.01759908333199e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.0195341962666e-12!GO:0005524;ATP binding;1.35685681859904e-12!GO:0006732;coenzyme metabolic process;1.65881495513178e-12!GO:0032559;adenyl ribonucleotide binding;1.66550538731485e-12!GO:0048193;Golgi vesicle transport;2.08240485551539e-12!GO:0009055;electron carrier activity;7.39913100291583e-12!GO:0005635;nuclear envelope;2.3509377485596e-11!GO:0051726;regulation of cell cycle;3.08225528412832e-11!GO:0008219;cell death;3.80155888118576e-11!GO:0016265;death;3.80155888118576e-11!GO:0000074;regulation of progression through cell cycle;4.8348857324227e-11!GO:0006974;response to DNA damage stimulus;6.27399678741422e-11!GO:0043687;post-translational protein modification;7.2473865888887e-11!GO:0003712;transcription cofactor activity;7.43649532254276e-11!GO:0042623;ATPase activity, coupled;7.68329252130108e-11!GO:0044453;nuclear membrane part;9.11750573923241e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.07405177408257e-10!GO:0009259;ribonucleotide metabolic process;1.11872424351186e-10!GO:0005793;ER-Golgi intermediate compartment;1.16916868405457e-10!GO:0016887;ATPase activity;1.75354922583747e-10!GO:0006163;purine nucleotide metabolic process;1.83285032512477e-10!GO:0006399;tRNA metabolic process;2.34810166495765e-10!GO:0031965;nuclear membrane;2.74375193304224e-10!GO:0005789;endoplasmic reticulum membrane;2.82685220265791e-10!GO:0048523;negative regulation of cellular process;3.71698699007048e-10!GO:0003743;translation initiation factor activity;3.95437504920008e-10!GO:0006913;nucleocytoplasmic transport;4.08050687997089e-10!GO:0009150;purine ribonucleotide metabolic process;4.35109122730678e-10!GO:0051169;nuclear transport;8.82581173377637e-10!GO:0007067;mitosis;1.12730988859955e-09!GO:0000087;M phase of mitotic cell cycle;1.18038875937426e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.18038875937426e-09!GO:0006164;purine nucleotide biosynthetic process;1.35695332824311e-09!GO:0006413;translational initiation;1.48058744200007e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.49868542023231e-09!GO:0008639;small protein conjugating enzyme activity;1.55872305873055e-09!GO:0016491;oxidoreductase activity;1.8068636942564e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.92032353466174e-09!GO:0009260;ribonucleotide biosynthetic process;2.25990656779227e-09!GO:0016604;nuclear body;2.76905727847212e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.18975237924777e-09!GO:0004842;ubiquitin-protein ligase activity;3.40806021493714e-09!GO:0006260;DNA replication;3.51109036138641e-09!GO:0008565;protein transporter activity;3.7168611646015e-09!GO:0051276;chromosome organization and biogenesis;3.71761705603235e-09!GO:0006364;rRNA processing;4.32217176909161e-09!GO:0006446;regulation of translational initiation;4.32660643474721e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.84713016162242e-09!GO:0006323;DNA packaging;5.84713016162242e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.19361889946403e-09!GO:0009056;catabolic process;7.66099680767898e-09!GO:0005643;nuclear pore;7.67848537995346e-09!GO:0009719;response to endogenous stimulus;8.3908391596003e-09!GO:0051188;cofactor biosynthetic process;8.44493586622852e-09!GO:0016072;rRNA metabolic process;9.67766838179144e-09!GO:0009199;ribonucleoside triphosphate metabolic process;9.77197644590788e-09!GO:0022403;cell cycle phase;1.16890966572454e-08!GO:0019787;small conjugating protein ligase activity;1.28707956758396e-08!GO:0009141;nucleoside triphosphate metabolic process;1.29413910107296e-08!GO:0065002;intracellular protein transport across a membrane;1.34747621988014e-08!GO:0005694;chromosome;1.42049768141406e-08!GO:0048519;negative regulation of biological process;1.55016780260097e-08!GO:0006281;DNA repair;1.6426170020591e-08!GO:0009060;aerobic respiration;1.77387256807422e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.93458522856422e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.93458522856422e-08!GO:0017038;protein import;2.07537573450096e-08!GO:0044427;chromosomal part;2.50395813973815e-08!GO:0015986;ATP synthesis coupled proton transport;2.86081484763813e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.86081484763813e-08!GO:0016740;transferase activity;3.00665413758359e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.17673491827176e-08!GO:0051301;cell division;4.14004863422411e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.26823859090216e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.26823859090216e-08!GO:0042981;regulation of apoptosis;4.33521671278301e-08!GO:0009117;nucleotide metabolic process;4.33521671278301e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.0228771238047e-08!GO:0004812;aminoacyl-tRNA ligase activity;5.0228771238047e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.0228771238047e-08!GO:0043067;regulation of programmed cell death;5.19950417737626e-08!GO:0007005;mitochondrion organization and biogenesis;6.48168862843853e-08!GO:0003676;nucleic acid binding;6.69258907055603e-08!GO:0046930;pore complex;6.73840488859142e-08!GO:0045333;cellular respiration;7.71571245057616e-08!GO:0065004;protein-DNA complex assembly;8.20602893052554e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.60587183569272e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.60587183569272e-08!GO:0006333;chromatin assembly or disassembly;8.60587183569272e-08!GO:0006461;protein complex assembly;8.94850845141557e-08!GO:0016881;acid-amino acid ligase activity;9.4912262526243e-08!GO:0046034;ATP metabolic process;9.72338159424952e-08!GO:0006793;phosphorus metabolic process;1.09981570540301e-07!GO:0006796;phosphate metabolic process;1.09981570540301e-07!GO:0051246;regulation of protein metabolic process;1.10527148351765e-07!GO:0000785;chromatin;1.19370632310378e-07!GO:0019829;cation-transporting ATPase activity;1.20594420344461e-07!GO:0043038;amino acid activation;1.26585691943226e-07!GO:0006418;tRNA aminoacylation for protein translation;1.26585691943226e-07!GO:0043039;tRNA aminoacylation;1.26585691943226e-07!GO:0006916;anti-apoptosis;2.27773900591029e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.54295888295787e-07!GO:0005788;endoplasmic reticulum lumen;2.67576046487053e-07!GO:0043069;negative regulation of programmed cell death;3.13926195658373e-07!GO:0006754;ATP biosynthetic process;3.79058987176858e-07!GO:0006753;nucleoside phosphate metabolic process;3.79058987176858e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.81418939231887e-07!GO:0043066;negative regulation of apoptosis;4.75436888406031e-07!GO:0008026;ATP-dependent helicase activity;4.94047543944936e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.9631445943574e-07!GO:0016787;hydrolase activity;6.52322164165674e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.98873035321194e-07!GO:0044431;Golgi apparatus part;7.15181387995301e-07!GO:0016779;nucleotidyltransferase activity;7.52338676239974e-07!GO:0016310;phosphorylation;7.89976545219183e-07!GO:0016607;nuclear speck;7.99249105071737e-07!GO:0030120;vesicle coat;8.16161088504139e-07!GO:0030662;coated vesicle membrane;8.16161088504139e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.29654954437518e-07!GO:0006334;nucleosome assembly;9.97875594979137e-07!GO:0004386;helicase activity;1.04227136666732e-06!GO:0006366;transcription from RNA polymerase II promoter;1.2440710943042e-06!GO:0009108;coenzyme biosynthetic process;1.32386195254782e-06!GO:0031988;membrane-bound vesicle;1.55207932810037e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.55783677497938e-06!GO:0031497;chromatin assembly;1.73611595885928e-06!GO:0006099;tricarboxylic acid cycle;1.80109388253447e-06!GO:0046356;acetyl-CoA catabolic process;1.80109388253447e-06!GO:0045786;negative regulation of progression through cell cycle;1.94443704809948e-06!GO:0003924;GTPase activity;2.00632984237002e-06!GO:0000279;M phase;2.03723896497164e-06!GO:0032446;protein modification by small protein conjugation;2.19836752348598e-06!GO:0031252;leading edge;2.21854715481599e-06!GO:0051187;cofactor catabolic process;2.26059184590143e-06!GO:0006091;generation of precursor metabolites and energy;2.49447191130921e-06!GO:0015630;microtubule cytoskeleton;2.88416172346589e-06!GO:0016567;protein ubiquitination;2.88831343712585e-06!GO:0005768;endosome;3.23653186521631e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.40366135372779e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.54783311755199e-06!GO:0000245;spliceosome assembly;3.60190776894755e-06!GO:0006084;acetyl-CoA metabolic process;3.69953779966867e-06!GO:0050657;nucleic acid transport;3.88659571072377e-06!GO:0051236;establishment of RNA localization;3.88659571072377e-06!GO:0050658;RNA transport;3.88659571072377e-06!GO:0006403;RNA localization;3.9736587599138e-06!GO:0016070;RNA metabolic process;4.17547322643149e-06!GO:0005762;mitochondrial large ribosomal subunit;4.37883655924542e-06!GO:0000315;organellar large ribosomal subunit;4.37883655924542e-06!GO:0048475;coated membrane;4.66615586484854e-06!GO:0030117;membrane coat;4.66615586484854e-06!GO:0045259;proton-transporting ATP synthase complex;4.83292023749864e-06!GO:0005525;GTP binding;4.85862056273029e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.9622065785597e-06!GO:0006752;group transfer coenzyme metabolic process;5.47874057755522e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.52013779420243e-06!GO:0016853;isomerase activity;5.89430693407814e-06!GO:0003697;single-stranded DNA binding;5.97275408114599e-06!GO:0005773;vacuole;1.02567835536474e-05!GO:0009109;coenzyme catabolic process;1.03192847015856e-05!GO:0004298;threonine endopeptidase activity;1.18182744593745e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.23095012515415e-05!GO:0003713;transcription coactivator activity;1.30800302420725e-05!GO:0051170;nuclear import;1.38280338361894e-05!GO:0003899;DNA-directed RNA polymerase activity;1.49335907867766e-05!GO:0031410;cytoplasmic vesicle;1.50127242477113e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.50127242477113e-05!GO:0000139;Golgi membrane;1.52354676823484e-05!GO:0031982;vesicle;1.70072208902249e-05!GO:0005667;transcription factor complex;1.8620016881319e-05!GO:0003714;transcription corepressor activity;2.20805641476808e-05!GO:0003724;RNA helicase activity;2.33077058722633e-05!GO:0031968;organelle outer membrane;2.37645485916246e-05!GO:0000151;ubiquitin ligase complex;2.63473215087636e-05!GO:0006606;protein import into nucleus;3.03521499770885e-05!GO:0005770;late endosome;3.03821881737149e-05!GO:0045454;cell redox homeostasis;3.08398396480637e-05!GO:0019867;outer membrane;3.398560739737e-05!GO:0016044;membrane organization and biogenesis;3.7877096842502e-05!GO:0043623;cellular protein complex assembly;3.95518232095811e-05!GO:0007010;cytoskeleton organization and biogenesis;4.02411218180942e-05!GO:0044440;endosomal part;4.15551835515358e-05!GO:0010008;endosome membrane;4.15551835515358e-05!GO:0009165;nucleotide biosynthetic process;4.48691079499924e-05!GO:0019899;enzyme binding;4.67371482233594e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.79129484627587e-05!GO:0016563;transcription activator activity;4.98938744654957e-05!GO:0043566;structure-specific DNA binding;5.13518159852977e-05!GO:0030867;rough endoplasmic reticulum membrane;5.47851204055272e-05!GO:0032561;guanyl ribonucleotide binding;5.60123233868968e-05!GO:0019001;guanyl nucleotide binding;5.60123233868968e-05!GO:0030029;actin filament-based process;5.8901999012903e-05!GO:0016564;transcription repressor activity;5.8901999012903e-05!GO:0016568;chromatin modification;6.32328733990866e-05!GO:0005741;mitochondrial outer membrane;7.0064968046647e-05!GO:0051028;mRNA transport;7.25222606783326e-05!GO:0006613;cotranslational protein targeting to membrane;7.64202945586946e-05!GO:0000323;lytic vacuole;7.94611947402675e-05!GO:0005764;lysosome;7.94611947402675e-05!GO:0044262;cellular carbohydrate metabolic process;8.53643177984639e-05!GO:0048522;positive regulation of cellular process;8.84163248159335e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.97132686559497e-05!GO:0000314;organellar small ribosomal subunit;8.97132686559497e-05!GO:0005763;mitochondrial small ribosomal subunit;8.97132686559497e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.69921052342693e-05!GO:0015399;primary active transmembrane transporter activity;9.69921052342693e-05!GO:0008654;phospholipid biosynthetic process;0.000116272367745925!GO:0033116;ER-Golgi intermediate compartment membrane;0.000127292590877148!GO:0051087;chaperone binding;0.000135709428773181!GO:0008092;cytoskeletal protein binding;0.000141404831866227!GO:0051329;interphase of mitotic cell cycle;0.000165156660987578!GO:0005769;early endosome;0.000166815694369871!GO:0005798;Golgi-associated vesicle;0.000183300908625228!GO:0051325;interphase;0.000188873978530397!GO:0065009;regulation of a molecular function;0.000197028055400284!GO:0031324;negative regulation of cellular metabolic process;0.000202889291736902!GO:0008632;apoptotic program;0.000214350512777118!GO:0015980;energy derivation by oxidation of organic compounds;0.000218316837452742!GO:0005905;coated pit;0.000227328827870567!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000233488566792282!GO:0005048;signal sequence binding;0.000240351192182611!GO:0016859;cis-trans isomerase activity;0.000267479306632214!GO:0043681;protein import into mitochondrion;0.000282160685368716!GO:0005813;centrosome;0.000285336495592318!GO:0000786;nucleosome;0.000331330950089522!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000336439285513499!GO:0006082;organic acid metabolic process;0.000345195090078782!GO:0051427;hormone receptor binding;0.0003499022276941!GO:0007243;protein kinase cascade;0.0003499022276941!GO:0008186;RNA-dependent ATPase activity;0.000393982121094777!GO:0005885;Arp2/3 protein complex;0.000414355660706274!GO:0019752;carboxylic acid metabolic process;0.0004283632032867!GO:0050794;regulation of cellular process;0.000429284913823857!GO:0005819;spindle;0.000483561583421419!GO:0008047;enzyme activator activity;0.000487292920027381!GO:0043021;ribonucleoprotein binding;0.000503882863796128!GO:0008033;tRNA processing;0.000508543956022341!GO:0007264;small GTPase mediated signal transduction;0.000523600373914111!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000530879711302662!GO:0005815;microtubule organizing center;0.000556463625169994!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000567906762835125!GO:0042802;identical protein binding;0.000568242446607!GO:0051789;response to protein stimulus;0.000583735923682808!GO:0006986;response to unfolded protein;0.000583735923682808!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000633140561522787!GO:0019843;rRNA binding;0.000662673145186559!GO:0035257;nuclear hormone receptor binding;0.000717078427878198!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000728784033027493!GO:0005791;rough endoplasmic reticulum;0.000778910421323833!GO:0048471;perinuclear region of cytoplasm;0.000794572212510554!GO:0006839;mitochondrial transport;0.000819002206343781!GO:0006950;response to stress;0.000865137812519352!GO:0009892;negative regulation of metabolic process;0.000909852257037436!GO:0051168;nuclear export;0.000944346222391435!GO:0006414;translational elongation;0.000952341870630098!GO:0050662;coenzyme binding;0.000953406423129748!GO:0007006;mitochondrial membrane organization and biogenesis;0.000996517067334365!GO:0004004;ATP-dependent RNA helicase activity;0.00103176323427885!GO:0046483;heterocycle metabolic process;0.00106566617104812!GO:0051920;peroxiredoxin activity;0.0011107408578572!GO:0006626;protein targeting to mitochondrion;0.00111730303278364!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00111730303278364!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00126142669702859!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00126142669702859!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00126142669702859!GO:0043492;ATPase activity, coupled to movement of substances;0.00134016957938611!GO:0000059;protein import into nucleus, docking;0.00148797493280403!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00156921028929774!GO:0006612;protein targeting to membrane;0.00162409817138177!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00164537958216102!GO:0044452;nucleolar part;0.00165668763706664!GO:0030880;RNA polymerase complex;0.00167404643544876!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00189000447469411!GO:0005096;GTPase activator activity;0.00191904055032318!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00198658745329732!GO:0008361;regulation of cell size;0.0019996556919135!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00200946087607618!GO:0008250;oligosaccharyl transferase complex;0.00208071633166673!GO:0006778;porphyrin metabolic process;0.00223096275103792!GO:0033013;tetrapyrrole metabolic process;0.00223096275103792!GO:0016049;cell growth;0.00224341303087467!GO:0030663;COPI coated vesicle membrane;0.00229584255700989!GO:0030126;COPI vesicle coat;0.00229584255700989!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0023137065309452!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00232943843781114!GO:0006261;DNA-dependent DNA replication;0.00232943843781114!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.002669860294411!GO:0004576;oligosaccharyl transferase activity;0.00270655937147762!GO:0051252;regulation of RNA metabolic process;0.00282868343938925!GO:0043284;biopolymer biosynthetic process;0.00284834469128255!GO:0046474;glycerophospholipid biosynthetic process;0.00286789889399726!GO:0051540;metal cluster binding;0.00286789889399726!GO:0051536;iron-sulfur cluster binding;0.00286789889399726!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00303530658712084!GO:0015002;heme-copper terminal oxidase activity;0.00303530658712084!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00303530658712084!GO:0004129;cytochrome-c oxidase activity;0.00303530658712084!GO:0015992;proton transport;0.00305804003623874!GO:0006807;nitrogen compound metabolic process;0.00312989891442836!GO:0031072;heat shock protein binding;0.00327855964640362!GO:0006818;hydrogen transport;0.00334811648706358!GO:0007051;spindle organization and biogenesis;0.00334811648706358!GO:0005684;U2-dependent spliceosome;0.00334926736070961!GO:0050790;regulation of catalytic activity;0.00342083028059333!GO:0001558;regulation of cell growth;0.00369490878387931!GO:0006520;amino acid metabolic process;0.00372517895755959!GO:0006118;electron transport;0.00381002262471592!GO:0022890;inorganic cation transmembrane transporter activity;0.00386323673230321!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00386323673230321!GO:0030133;transport vesicle;0.00386958913002077!GO:0051287;NAD binding;0.00390515685667162!GO:0007050;cell cycle arrest;0.00390515685667162!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00390515685667162!GO:0000428;DNA-directed RNA polymerase complex;0.00390515685667162!GO:0006509;membrane protein ectodomain proteolysis;0.00391778706607126!GO:0033619;membrane protein proteolysis;0.00391778706607126!GO:0017166;vinculin binding;0.00393971280118129!GO:0030137;COPI-coated vesicle;0.00410553632840627!GO:0042168;heme metabolic process;0.00428333503931713!GO:0008094;DNA-dependent ATPase activity;0.00438903858300672!GO:0048487;beta-tubulin binding;0.00439287012766738!GO:0030027;lamellipodium;0.00440506727542342!GO:0006897;endocytosis;0.00444923055806169!GO:0010324;membrane invagination;0.00444923055806169!GO:0007265;Ras protein signal transduction;0.00444923055806169!GO:0008139;nuclear localization sequence binding;0.00448120245868718!GO:0048518;positive regulation of biological process;0.00449762760248652!GO:0030659;cytoplasmic vesicle membrane;0.00482969203704189!GO:0048468;cell development;0.00492158205235914!GO:0046467;membrane lipid biosynthetic process;0.00517466152617678!GO:0016481;negative regulation of transcription;0.00525358883876353!GO:0043488;regulation of mRNA stability;0.00536477985282092!GO:0043487;regulation of RNA stability;0.00536477985282092!GO:0018196;peptidyl-asparagine modification;0.00539877179011826!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00539877179011826!GO:0030134;ER to Golgi transport vesicle;0.00566070595812646!GO:0030132;clathrin coat of coated pit;0.00637729208451805!GO:0033673;negative regulation of kinase activity;0.00643261371430608!GO:0006469;negative regulation of protein kinase activity;0.00643261371430608!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00647065397814471!GO:0000075;cell cycle checkpoint;0.00647779121324055!GO:0006401;RNA catabolic process;0.00648061837726426!GO:0015036;disulfide oxidoreductase activity;0.00652034430621861!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00660890917486669!GO:0051539;4 iron, 4 sulfur cluster binding;0.00720570923794861!GO:0009308;amine metabolic process;0.00730723309508157!GO:0048660;regulation of smooth muscle cell proliferation;0.00735403148061542!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00776192085134925!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00776192085134925!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00776192085134925!GO:0030658;transport vesicle membrane;0.00776192085134925!GO:0032508;DNA duplex unwinding;0.00789082432685643!GO:0032392;DNA geometric change;0.00789082432685643!GO:0006595;polyamine metabolic process;0.00800221501223651!GO:0005657;replication fork;0.00800221501223651!GO:0051348;negative regulation of transferase activity;0.00808372439782186!GO:0035258;steroid hormone receptor binding;0.00832759686970563!GO:0048500;signal recognition particle;0.00853283740464496!GO:0004177;aminopeptidase activity;0.00868112059699995!GO:0003729;mRNA binding;0.00881202227203952!GO:0009967;positive regulation of signal transduction;0.00906282528611396!GO:0006383;transcription from RNA polymerase III promoter;0.00921238729341208!GO:0030127;COPII vesicle coat;0.00940136528403975!GO:0012507;ER to Golgi transport vesicle membrane;0.00940136528403975!GO:0005874;microtubule;0.00960855944180823!GO:0006779;porphyrin biosynthetic process;0.00988306469515148!GO:0033014;tetrapyrrole biosynthetic process;0.00988306469515148!GO:0016197;endosome transport;0.00995872126534694!GO:0003684;damaged DNA binding;0.0100200277006061!GO:0006611;protein export from nucleus;0.0102857086220841!GO:0043086;negative regulation of catalytic activity;0.0107095965453324!GO:0016272;prefoldin complex;0.0110154703344704!GO:0003779;actin binding;0.0111914243863084!GO:0003746;translation elongation factor activity;0.0112009113557239!GO:0006402;mRNA catabolic process;0.011313994658515!GO:0008610;lipid biosynthetic process;0.0115267373223726!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0122823051577513!GO:0008637;apoptotic mitochondrial changes;0.0126930139527199!GO:0000339;RNA cap binding;0.0127278936395868!GO:0006740;NADPH regeneration;0.0128550018765566!GO:0006098;pentose-phosphate shunt;0.0128550018765566!GO:0003711;transcription elongation regulator activity;0.0129779030726262!GO:0000082;G1/S transition of mitotic cell cycle;0.0130146745540575!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0132353731637393!GO:0007162;negative regulation of cell adhesion;0.0132353731637393!GO:0030041;actin filament polymerization;0.0132804259347441!GO:0006891;intra-Golgi vesicle-mediated transport;0.0133451792004564!GO:0016363;nuclear matrix;0.0133500717706787!GO:0005869;dynactin complex;0.0134451954463099!GO:0045941;positive regulation of transcription;0.0136559179504499!GO:0008312;7S RNA binding;0.0136758531087331!GO:0005832;chaperonin-containing T-complex;0.0139800843773195!GO:0007242;intracellular signaling cascade;0.0142652510184126!GO:0005862;muscle thin filament tropomyosin;0.0143521825222551!GO:0005637;nuclear inner membrane;0.0148824683399248!GO:0008243;plasminogen activator activity;0.0152719571425488!GO:0016126;sterol biosynthetic process;0.0153600788870848!GO:0046489;phosphoinositide biosynthetic process;0.0155387281362195!GO:0044433;cytoplasmic vesicle part;0.0158219534818041!GO:0006979;response to oxidative stress;0.0158612240650024!GO:0007088;regulation of mitosis;0.0159880320658781!GO:0030521;androgen receptor signaling pathway;0.0165314695748258!GO:0048037;cofactor binding;0.0165444874996737!GO:0015631;tubulin binding;0.0165498251446984!GO:0001726;ruffle;0.0165498251446984!GO:0031124;mRNA 3'-end processing;0.0165498251446984!GO:0003678;DNA helicase activity;0.0167473038171195!GO:0030118;clathrin coat;0.0167485437707817!GO:0006289;nucleotide-excision repair;0.0168575957035226!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0172919036242941!GO:0009112;nucleobase metabolic process;0.0173856818016937!GO:0006268;DNA unwinding during replication;0.0174340830120695!GO:0005774;vacuolar membrane;0.0175494795529561!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0175494795529561!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0175494795529561!GO:0051270;regulation of cell motility;0.0177640235867554!GO:0030660;Golgi-associated vesicle membrane;0.0177858694832714!GO:0022408;negative regulation of cell-cell adhesion;0.0177858694832714!GO:0000049;tRNA binding;0.0179385137302458!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0181168654292319!GO:0045047;protein targeting to ER;0.0181168654292319!GO:0016741;transferase activity, transferring one-carbon groups;0.0185964919740149!GO:0007021;tubulin folding;0.0185964919740149!GO:0006783;heme biosynthetic process;0.0187703381275817!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0190127969907578!GO:0043022;ribosome binding;0.0193024191008354!GO:0000096;sulfur amino acid metabolic process;0.0194960275253896!GO:0006695;cholesterol biosynthetic process;0.0201482254437059!GO:0004527;exonuclease activity;0.0201718206952561!GO:0050789;regulation of biological process;0.0202310411325234!GO:0008168;methyltransferase activity;0.0202310411325234!GO:0008180;signalosome;0.0202310411325234!GO:0040011;locomotion;0.0202310411325234!GO:0006405;RNA export from nucleus;0.0202310411325234!GO:0008154;actin polymerization and/or depolymerization;0.0204841450375695!GO:0048659;smooth muscle cell proliferation;0.0205414553108616!GO:0006417;regulation of translation;0.0207127783063656!GO:0030176;integral to endoplasmic reticulum membrane;0.0210058446348776!GO:0009303;rRNA transcription;0.0213943864992202!GO:0005092;GDP-dissociation inhibitor activity;0.0214937590597308!GO:0016301;kinase activity;0.0215498006033378!GO:0051101;regulation of DNA binding;0.0217879344666987!GO:0008283;cell proliferation;0.0217879344666987!GO:0043281;regulation of caspase activity;0.022118802529194!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0221527171740391!GO:0007266;Rho protein signal transduction;0.0225602402904114!GO:0030695;GTPase regulator activity;0.0228068040429176!GO:0006284;base-excision repair;0.0229161817907873!GO:0043189;H4/H2A histone acetyltransferase complex;0.0229698934207283!GO:0031902;late endosome membrane;0.0231893506829178!GO:0007346;regulation of progression through mitotic cell cycle;0.0234238973082992!GO:0005100;Rho GTPase activator activity;0.023528181837009!GO:0047485;protein N-terminus binding;0.023528181837009!GO:0022415;viral reproductive process;0.0236714227459329!GO:0031901;early endosome membrane;0.0240429579512179!GO:0035267;NuA4 histone acetyltransferase complex;0.0245730664745519!GO:0045893;positive regulation of transcription, DNA-dependent;0.0248484637906212!GO:0006790;sulfur metabolic process;0.0256575292098601!GO:0000287;magnesium ion binding;0.0260782498504886!GO:0004674;protein serine/threonine kinase activity;0.0260898233806391!GO:0003756;protein disulfide isomerase activity;0.0262685276647855!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0262685276647855!GO:0009116;nucleoside metabolic process;0.0265787010083315!GO:0035035;histone acetyltransferase binding;0.0270329911869849!GO:0040012;regulation of locomotion;0.0272410079860598!GO:0006650;glycerophospholipid metabolic process;0.0273847477617302!GO:0001953;negative regulation of cell-matrix adhesion;0.0274430336632216!GO:0016860;intramolecular oxidoreductase activity;0.0276638344210858!GO:0005083;small GTPase regulator activity;0.0277444093761059!GO:0040008;regulation of growth;0.0278010075698366!GO:0005975;carbohydrate metabolic process;0.0278659641907202!GO:0030145;manganese ion binding;0.0281156448970996!GO:0006354;RNA elongation;0.0283707307577499!GO:0006519;amino acid and derivative metabolic process;0.0285700119679031!GO:0051059;NF-kappaB binding;0.0289762406765883!GO:0008538;proteasome activator activity;0.0289816521358342!GO:0006352;transcription initiation;0.0289816521358342!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0290562215339779!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0290679789397904!GO:0004518;nuclease activity;0.0292809630275579!GO:0031418;L-ascorbic acid binding;0.02931191057048!GO:0019206;nucleoside kinase activity;0.029410080812423!GO:0007040;lysosome organization and biogenesis;0.0297197385362917!GO:0050178;phenylpyruvate tautomerase activity;0.0302599230397775!GO:0046519;sphingoid metabolic process;0.0305604468257593!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0310826414089341!GO:0010257;NADH dehydrogenase complex assembly;0.0310826414089341!GO:0033108;mitochondrial respiratory chain complex assembly;0.0310826414089341!GO:0000123;histone acetyltransferase complex;0.0311701119686162!GO:0007034;vacuolar transport;0.031643588475661!GO:0000209;protein polyubiquitination;0.031643588475661!GO:0006007;glucose catabolic process;0.032147611866571!GO:0045045;secretory pathway;0.032147611866571!GO:0033559;unsaturated fatty acid metabolic process;0.0326860805375879!GO:0006636;unsaturated fatty acid biosynthetic process;0.0326860805375879!GO:0006378;mRNA polyadenylation;0.0326860805375879!GO:0043065;positive regulation of apoptosis;0.0327495415039501!GO:0006144;purine base metabolic process;0.032758394649974!GO:0046426;negative regulation of JAK-STAT cascade;0.0329661394365316!GO:0044437;vacuolar part;0.0330644838503053!GO:0030833;regulation of actin filament polymerization;0.03306474132444!GO:0031272;regulation of pseudopodium formation;0.03306474132444!GO:0031269;pseudopodium formation;0.03306474132444!GO:0031344;regulation of cell projection organization and biogenesis;0.03306474132444!GO:0031268;pseudopodium organization and biogenesis;0.03306474132444!GO:0031346;positive regulation of cell projection organization and biogenesis;0.03306474132444!GO:0031274;positive regulation of pseudopodium formation;0.03306474132444!GO:0019318;hexose metabolic process;0.0331091745979369!GO:0031529;ruffle organization and biogenesis;0.0336332545684316!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0339224416969542!GO:0031625;ubiquitin protein ligase binding;0.0341393338018919!GO:0051098;regulation of binding;0.0344010736821517!GO:0007033;vacuole organization and biogenesis;0.0347002089486825!GO:0043068;positive regulation of programmed cell death;0.0367975702802317!GO:0005996;monosaccharide metabolic process;0.0377978139475289!GO:0018193;peptidyl-amino acid modification;0.0377978139475289!GO:0008652;amino acid biosynthetic process;0.0384478602968068!GO:0005665;DNA-directed RNA polymerase II, core complex;0.038767542331202!GO:0004722;protein serine/threonine phosphatase activity;0.038767542331202!GO:0012506;vesicle membrane;0.0387946929465505!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0389697555756712!GO:0006643;membrane lipid metabolic process;0.0394389101453724!GO:0006376;mRNA splice site selection;0.0394922256041585!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0394922256041585!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0395017845387628!GO:0005758;mitochondrial intermembrane space;0.0402002917943344!GO:0009889;regulation of biosynthetic process;0.0410371924948119!GO:0008320;protein transmembrane transporter activity;0.0414025388782237!GO:0001568;blood vessel development;0.0414629125213486!GO:0009124;nucleoside monophosphate biosynthetic process;0.0415373751914631!GO:0009123;nucleoside monophosphate metabolic process;0.0415373751914631!GO:0030911;TPR domain binding;0.0417836623818046!GO:0005765;lysosomal membrane;0.0418550657722179!GO:0030508;thiol-disulfide exchange intermediate activity;0.0422140543312345!GO:0045792;negative regulation of cell size;0.0423326921863121!GO:0004197;cysteine-type endopeptidase activity;0.0424778239704529!GO:0008287;protein serine/threonine phosphatase complex;0.0425923165940024!GO:0050681;androgen receptor binding;0.0425923165940024!GO:0030308;negative regulation of cell growth;0.0438404280633361!GO:0006892;post-Golgi vesicle-mediated transport;0.0439625745138685!GO:0030125;clathrin vesicle coat;0.0439625745138685!GO:0030665;clathrin coated vesicle membrane;0.0439625745138685!GO:0005669;transcription factor TFIID complex;0.044550999225395!GO:0004448;isocitrate dehydrogenase activity;0.0445739745455629!GO:0022884;macromolecule transmembrane transporter activity;0.0450289263358618!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0450289263358618!GO:0004680;casein kinase activity;0.0451880437875868!GO:0030334;regulation of cell migration;0.0454521090343782!GO:0005099;Ras GTPase activator activity;0.0454964140628397!GO:0006919;caspase activation;0.0455455729958001!GO:0005784;translocon complex;0.045638424825716!GO:0016251;general RNA polymerase II transcription factor activity;0.0457891900228408!GO:0016407;acetyltransferase activity;0.045887613339252!GO:0001836;release of cytochrome c from mitochondria;0.0461375912027558!GO:0007044;cell-substrate junction assembly;0.0463311083639261!GO:0008147;structural constituent of bone;0.0463311083639261!GO:0030518;steroid hormone receptor signaling pathway;0.0466059825091007!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0466059825091007!GO:0008234;cysteine-type peptidase activity;0.0469151955883576!GO:0016584;nucleosome positioning;0.0473120770593982!GO:0006458;'de novo' protein folding;0.0473120770593982!GO:0051084;'de novo' posttranslational protein folding;0.0473120770593982!GO:0051336;regulation of hydrolase activity;0.0473120770593982!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0473120770593982!GO:0031326;regulation of cellular biosynthetic process;0.0479596075486053!GO:0045879;negative regulation of smoothened signaling pathway;0.0479596075486053!GO:0003682;chromatin binding;0.0479596075486053!GO:0030032;lamellipodium biogenesis;0.0489715521695389!GO:0009451;RNA modification;0.0496054987582805!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.049619804462132!GO:0006672;ceramide metabolic process;0.049619804462132!GO:0030913;paranodal junction assembly;0.0496304475677233!GO:0032288;myelin formation;0.0496304475677233 | |||
|sample_id=11263 | |sample_id=11263 | ||
|sample_note=Originally library704 tailing failed, these samples are now being remade in Automation6 | |sample_note=Originally library704 tailing failed, these samples are now being remade in Automation6 | ||
| Line 76: | Line 105: | ||
|sample_tissue=aorta | |sample_tissue=aorta | ||
|top_motifs=SOX{8,9,10}:1.19960140215;TLX1..3_NFIC{dimer}:1.19829457111;ALX1:0.937440628978;TFAP4:0.929898769009;GATA6:0.887990098019;RXR{A,B,G}:0.877390966627;PAX1,9:0.833508220383;HOX{A5,B5}:0.786468643182;AR:0.768668275222;ADNP_IRX_SIX_ZHX:0.754453913129;HAND1,2:0.748306806387;LHX3,4:0.741138866828;IKZF1:0.726244531357;ZNF148:0.69556975679;SOX2:0.688980738845;bHLH_family:0.682063377376;NANOG:0.638532175601;NFATC1..3:0.618141644739;CRX:0.611503473191;LEF1_TCF7_TCF7L1,2:0.608665520812;SOX17:0.598307071732;PAX6:0.577112696403;TBP:0.569902668403;GTF2A1,2:0.561212077614;ZNF238:0.542153939241;ETS1,2:0.541926243964;ELF1,2,4:0.517163937835;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.421856746026;GFI1:0.403203297994;POU3F1..4:0.40086166721;TFAP2{A,C}:0.379492722103;POU2F1..3:0.378786787936;PBX1:0.372534754373;TP53:0.365442566825;SPIB:0.347971340455;POU1F1:0.345967822146;TFDP1:0.328373038604;HIC1:0.320288840617;NFE2L1:0.284324309713;FOS_FOS{B,L1}_JUN{B,D}:0.276889578933;GZF1:0.259095330456;ESRRA:0.253232981467;SOX5:0.240908869184;RORA:0.233208276944;BACH2:0.229540282779;ZNF423:0.225573766323;REST:0.217749574651;NFE2L2:0.215335112985;GFI1B:0.171033335716;HNF4A_NR2F1,2:0.163530851403;NFE2:0.157795646354;NR3C1:0.155060926324;FOSL2:0.150804733561;ONECUT1,2:0.145655013821;TEAD1:0.130743905268;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.124354620424;PPARG:0.117143366891;TFAP2B:0.112827266303;SP1:0.110934921754;PRRX1,2:0.0988850424232;RBPJ:0.0774883002544;PAX8:0.0549121120708;CDC5L:0.0369795829332;NR5A1,2:0.0173558076967;FOXM1:-0.00763436260662;ZBTB6:-0.0186844595081;MTE{core}:-0.0324462803252;IKZF2:-0.0473470720574;NFIX:-0.0579653210118;SRF:-0.0615651689877;XCPE1{core}:-0.0622108906383;ARID5B:-0.0745302161134;EN1,2:-0.0767437274893;STAT5{A,B}:-0.0869531056799;E2F1..5:-0.0940368087616;HNF1A:-0.0951606157445;ZFP161:-0.0986841566806;MEF2{A,B,C,D}:-0.0996341994334;ATF2:-0.101640659961;VSX1,2:-0.104592181835;NKX2-3_NKX2-5:-0.108001511276;POU6F1:-0.117718388891;LMO2:-0.124785769086;NHLH1,2:-0.136379501566;HBP1_HMGB_SSRP1_UBTF:-0.136902557009;HLF:-0.139413871408;GLI1..3:-0.139829784722;SPZ1:-0.148957588518;TFCP2:-0.155610936755;FOXD3:-0.157436647851;MYOD1:-0.162977670601;MTF1:-0.178787738687;SPI1:-0.188018164317;HOX{A6,A7,B6,B7}:-0.189818576223;GATA4:-0.190034131153;GTF2I:-0.191938483284;XBP1:-0.200079151837;TAL1_TCF{3,4,12}:-0.201613068061;HES1:-0.21026832569;MED-1{core}:-0.213221159185;NFY{A,B,C}:-0.232205440492;NKX3-2:-0.240570939044;YY1:-0.246239596629;CEBPA,B_DDIT3:-0.275847502395;SMAD1..7,9:-0.280808411425;TGIF1:-0.284086321374;MYB:-0.287043935734;JUN:-0.294553928919;UFEwm:-0.296215108225;GCM1,2:-0.304231809752;FOXQ1:-0.307585167838;HMGA1,2:-0.313540412465;FOXA2:-0.315707758459;ZNF143:-0.320494409157;RXRA_VDR{dimer}:-0.321102701016;RREB1:-0.333906963388;EGR1..3:-0.334421044076;RFX1:-0.350659800248;NKX2-2,8:-0.350878225195;PITX1..3:-0.377503231216;PAX3,7:-0.383307800388;STAT2,4,6:-0.393494635782;CUX2:-0.398265002318;EBF1:-0.401989569417;NRF1:-0.411513674776;MZF1:-0.417671673727;PATZ1:-0.427554696603;TOPORS:-0.429816570577;FOX{F1,F2,J1}:-0.437521061263;NFKB1_REL_RELA:-0.438415843774;OCT4_SOX2{dimer}:-0.445637925953;MAZ:-0.44974013321;FOX{I1,J2}:-0.450164322737;PAX2:-0.463627816728;HOXA9_MEIS1:-0.464547905324;RUNX1..3:-0.49752941206;MYBL2:-0.511425764236;FOXL1:-0.511953647651;HMX1:-0.513026504556;PAX5:-0.527023635641;DMAP1_NCOR{1,2}_SMARC:-0.527649012835;PRDM1:-0.532918931134;NANOG{mouse}:-0.565886350235;KLF4:-0.569141530985;CREB1:-0.584773530305;MYFfamily:-0.603179910608;ATF6:-0.606940679383;AHR_ARNT_ARNT2:-0.640138674921;ZNF384:-0.651194877103;ELK1,4_GABP{A,B1}:-0.660676563568;ALX4:-0.663385357367;BREu{core}:-0.670014550256;EVI1:-0.682622838552;SNAI1..3:-0.686670712263;TLX2:-0.704400577247;IRF1,2:-0.717263047681;POU5F1:-0.718113863088;TEF:-0.727992653235;HOX{A4,D4}:-0.736242193639;IRF7:-0.740201531248;BPTF:-0.741927125794;FOX{D1,D2}:-0.755281125391;ZIC1..3:-0.757095297219;PDX1:-0.769223987216;HIF1A:-0.787314582206;HSF1,2:-0.792748097269;TBX4,5:-0.803536997179;NFIL3:-0.809940080449;SREBF1,2:-0.821433110402;NR1H4:-0.849622809606;MAFB:-0.849671098042;ZEB1:-0.866966308767;NKX3-1:-0.880789516307;FOXP3:-0.890113062605;EP300:-0.900502164059;NR6A1:-0.92393926117;FOXN1:-0.924005914084;ZBTB16:-0.9280392473;ESR1:-0.942925905697;RFX2..5_RFXANK_RFXAP:-1.01256294381;PAX4:-1.05149040319;FOXO1,3,4:-1.07660005964;ATF5_CREB3:-1.10047142511;AIRE:-1.14042522948;T:-1.1454214609;DBP:-1.16928180208;NKX2-1,4:-1.28673912524;ATF4:-1.3202413384;STAT1,3:-1.48601536514;FOXP1:-1.52668632593;NKX6-1,2:-1.61013734671;CDX1,2,4:-1.63321872262 | |top_motifs=SOX{8,9,10}:1.19960140215;TLX1..3_NFIC{dimer}:1.19829457111;ALX1:0.937440628978;TFAP4:0.929898769009;GATA6:0.887990098019;RXR{A,B,G}:0.877390966627;PAX1,9:0.833508220383;HOX{A5,B5}:0.786468643182;AR:0.768668275222;ADNP_IRX_SIX_ZHX:0.754453913129;HAND1,2:0.748306806387;LHX3,4:0.741138866828;IKZF1:0.726244531357;ZNF148:0.69556975679;SOX2:0.688980738845;bHLH_family:0.682063377376;NANOG:0.638532175601;NFATC1..3:0.618141644739;CRX:0.611503473191;LEF1_TCF7_TCF7L1,2:0.608665520812;SOX17:0.598307071732;PAX6:0.577112696403;TBP:0.569902668403;GTF2A1,2:0.561212077614;ZNF238:0.542153939241;ETS1,2:0.541926243964;ELF1,2,4:0.517163937835;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.421856746026;GFI1:0.403203297994;POU3F1..4:0.40086166721;TFAP2{A,C}:0.379492722103;POU2F1..3:0.378786787936;PBX1:0.372534754373;TP53:0.365442566825;SPIB:0.347971340455;POU1F1:0.345967822146;TFDP1:0.328373038604;HIC1:0.320288840617;NFE2L1:0.284324309713;FOS_FOS{B,L1}_JUN{B,D}:0.276889578933;GZF1:0.259095330456;ESRRA:0.253232981467;SOX5:0.240908869184;RORA:0.233208276944;BACH2:0.229540282779;ZNF423:0.225573766323;REST:0.217749574651;NFE2L2:0.215335112985;GFI1B:0.171033335716;HNF4A_NR2F1,2:0.163530851403;NFE2:0.157795646354;NR3C1:0.155060926324;FOSL2:0.150804733561;ONECUT1,2:0.145655013821;TEAD1:0.130743905268;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.124354620424;PPARG:0.117143366891;TFAP2B:0.112827266303;SP1:0.110934921754;PRRX1,2:0.0988850424232;RBPJ:0.0774883002544;PAX8:0.0549121120708;CDC5L:0.0369795829332;NR5A1,2:0.0173558076967;FOXM1:-0.00763436260662;ZBTB6:-0.0186844595081;MTE{core}:-0.0324462803252;IKZF2:-0.0473470720574;NFIX:-0.0579653210118;SRF:-0.0615651689877;XCPE1{core}:-0.0622108906383;ARID5B:-0.0745302161134;EN1,2:-0.0767437274893;STAT5{A,B}:-0.0869531056799;E2F1..5:-0.0940368087616;HNF1A:-0.0951606157445;ZFP161:-0.0986841566806;MEF2{A,B,C,D}:-0.0996341994334;ATF2:-0.101640659961;VSX1,2:-0.104592181835;NKX2-3_NKX2-5:-0.108001511276;POU6F1:-0.117718388891;LMO2:-0.124785769086;NHLH1,2:-0.136379501566;HBP1_HMGB_SSRP1_UBTF:-0.136902557009;HLF:-0.139413871408;GLI1..3:-0.139829784722;SPZ1:-0.148957588518;TFCP2:-0.155610936755;FOXD3:-0.157436647851;MYOD1:-0.162977670601;MTF1:-0.178787738687;SPI1:-0.188018164317;HOX{A6,A7,B6,B7}:-0.189818576223;GATA4:-0.190034131153;GTF2I:-0.191938483284;XBP1:-0.200079151837;TAL1_TCF{3,4,12}:-0.201613068061;HES1:-0.21026832569;MED-1{core}:-0.213221159185;NFY{A,B,C}:-0.232205440492;NKX3-2:-0.240570939044;YY1:-0.246239596629;CEBPA,B_DDIT3:-0.275847502395;SMAD1..7,9:-0.280808411425;TGIF1:-0.284086321374;MYB:-0.287043935734;JUN:-0.294553928919;UFEwm:-0.296215108225;GCM1,2:-0.304231809752;FOXQ1:-0.307585167838;HMGA1,2:-0.313540412465;FOXA2:-0.315707758459;ZNF143:-0.320494409157;RXRA_VDR{dimer}:-0.321102701016;RREB1:-0.333906963388;EGR1..3:-0.334421044076;RFX1:-0.350659800248;NKX2-2,8:-0.350878225195;PITX1..3:-0.377503231216;PAX3,7:-0.383307800388;STAT2,4,6:-0.393494635782;CUX2:-0.398265002318;EBF1:-0.401989569417;NRF1:-0.411513674776;MZF1:-0.417671673727;PATZ1:-0.427554696603;TOPORS:-0.429816570577;FOX{F1,F2,J1}:-0.437521061263;NFKB1_REL_RELA:-0.438415843774;OCT4_SOX2{dimer}:-0.445637925953;MAZ:-0.44974013321;FOX{I1,J2}:-0.450164322737;PAX2:-0.463627816728;HOXA9_MEIS1:-0.464547905324;RUNX1..3:-0.49752941206;MYBL2:-0.511425764236;FOXL1:-0.511953647651;HMX1:-0.513026504556;PAX5:-0.527023635641;DMAP1_NCOR{1,2}_SMARC:-0.527649012835;PRDM1:-0.532918931134;NANOG{mouse}:-0.565886350235;KLF4:-0.569141530985;CREB1:-0.584773530305;MYFfamily:-0.603179910608;ATF6:-0.606940679383;AHR_ARNT_ARNT2:-0.640138674921;ZNF384:-0.651194877103;ELK1,4_GABP{A,B1}:-0.660676563568;ALX4:-0.663385357367;BREu{core}:-0.670014550256;EVI1:-0.682622838552;SNAI1..3:-0.686670712263;TLX2:-0.704400577247;IRF1,2:-0.717263047681;POU5F1:-0.718113863088;TEF:-0.727992653235;HOX{A4,D4}:-0.736242193639;IRF7:-0.740201531248;BPTF:-0.741927125794;FOX{D1,D2}:-0.755281125391;ZIC1..3:-0.757095297219;PDX1:-0.769223987216;HIF1A:-0.787314582206;HSF1,2:-0.792748097269;TBX4,5:-0.803536997179;NFIL3:-0.809940080449;SREBF1,2:-0.821433110402;NR1H4:-0.849622809606;MAFB:-0.849671098042;ZEB1:-0.866966308767;NKX3-1:-0.880789516307;FOXP3:-0.890113062605;EP300:-0.900502164059;NR6A1:-0.92393926117;FOXN1:-0.924005914084;ZBTB16:-0.9280392473;ESR1:-0.942925905697;RFX2..5_RFXANK_RFXAP:-1.01256294381;PAX4:-1.05149040319;FOXO1,3,4:-1.07660005964;ATF5_CREB3:-1.10047142511;AIRE:-1.14042522948;T:-1.1454214609;DBP:-1.16928180208;NKX2-1,4:-1.28673912524;ATF4:-1.3202413384;STAT1,3:-1.48601536514;FOXP1:-1.52668632593;NKX6-1,2:-1.61013734671;CDX1,2,4:-1.63321872262 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11263-116G3;search_select_hide=table117:FF:11263-116G3 | |||
}} | }} | ||
Latest revision as of 16:29, 3 June 2020
| Name: | Endothelial Cells - Aortic, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12495 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12495
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12495
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.433 |
| 10 | 10 | 0.738 |
| 100 | 100 | 0.624 |
| 101 | 101 | 0.176 |
| 102 | 102 | 0.532 |
| 103 | 103 | 0.641 |
| 104 | 104 | 0.825 |
| 105 | 105 | 0.882 |
| 106 | 106 | 0.122 |
| 107 | 107 | 0.0322 |
| 108 | 108 | 0.51 |
| 109 | 109 | 0.019 |
| 11 | 11 | 0.0414 |
| 110 | 110 | 0.0143 |
| 111 | 111 | 0.456 |
| 112 | 112 | 0.833 |
| 113 | 113 | 0.533 |
| 114 | 114 | 0.218 |
| 115 | 115 | 0.13 |
| 116 | 116 | 0.686 |
| 117 | 117 | 0.953 |
| 118 | 118 | 0.83 |
| 119 | 119 | 0.131 |
| 12 | 12 | 0.353 |
| 120 | 120 | 0.0228 |
| 121 | 121 | 0.934 |
| 122 | 122 | 0.678 |
| 123 | 123 | 0.0404 |
| 124 | 124 | 0.377 |
| 125 | 125 | 0.323 |
| 126 | 126 | 0.941 |
| 127 | 127 | 0.172 |
| 128 | 128 | 0.526 |
| 129 | 129 | 0.0489 |
| 13 | 13 | 0.312 |
| 130 | 130 | 0.587 |
| 131 | 131 | 0.961 |
| 132 | 132 | 0.84 |
| 133 | 133 | 0.99 |
| 134 | 134 | 0.789 |
| 135 | 135 | 0.19 |
| 136 | 136 | 0.65 |
| 137 | 137 | 0.211 |
| 138 | 138 | 0.48 |
| 139 | 139 | 0.553 |
| 14 | 14 | 0.795 |
| 140 | 140 | 0.563 |
| 141 | 141 | 0.479 |
| 142 | 142 | 0.769 |
| 143 | 143 | 0.0117 |
| 144 | 144 | 0.597 |
| 145 | 145 | 0.144 |
| 146 | 146 | 0.266 |
| 147 | 147 | 0.0222 |
| 148 | 148 | 0.619 |
| 149 | 149 | 0.0496 |
| 15 | 15 | 0.311 |
| 150 | 150 | 0.293 |
| 151 | 151 | 0.689 |
| 152 | 152 | 0.0365 |
| 153 | 153 | 0.438 |
| 154 | 154 | 0.86 |
| 155 | 155 | 0.274 |
| 156 | 156 | 0.717 |
| 157 | 157 | 0.214 |
| 158 | 158 | 0.603 |
| 159 | 159 | 0.701 |
| 16 | 16 | 0.494 |
| 160 | 160 | 0.0073 |
| 161 | 161 | 0.815 |
| 162 | 162 | 0.54 |
| 163 | 163 | 0.6 |
| 164 | 164 | 0.853 |
| 165 | 165 | 0.892 |
| 166 | 166 | 0.709 |
| 167 | 167 | 0.286 |
| 168 | 168 | 0.0783 |
| 169 | 169 | 0.0555 |
| 17 | 17 | 0.185 |
| 18 | 18 | 0.471 |
| 19 | 19 | 0.0886 |
| 2 | 2 | 0.591 |
| 20 | 20 | 0.892 |
| 21 | 21 | 0.515 |
| 22 | 22 | 0.145 |
| 23 | 23 | 0.161 |
| 24 | 24 | 0.387 |
| 25 | 25 | 0.647 |
| 26 | 26 | 0.563 |
| 27 | 27 | 0.219 |
| 28 | 28 | 0.104 |
| 29 | 29 | 0.688 |
| 3 | 3 | 0.711 |
| 30 | 30 | 0.364 |
| 31 | 31 | 0.719 |
| 32 | 32 | 0.54 |
| 33 | 33 | 0.122 |
| 34 | 34 | 0.206 |
| 35 | 35 | 0.641 |
| 36 | 36 | 0.112 |
| 37 | 37 | 0.312 |
| 38 | 38 | 0.164 |
| 39 | 39 | 0.412 |
| 4 | 4 | 0.427 |
| 40 | 40 | 0.0122 |
| 41 | 41 | 0.12 |
| 42 | 42 | 0.459 |
| 43 | 43 | 0.276 |
| 44 | 44 | 0.747 |
| 45 | 45 | 0.24 |
| 46 | 46 | 0.136 |
| 47 | 47 | 0.286 |
| 48 | 48 | 0.0556 |
| 49 | 49 | 0.395 |
| 5 | 5 | 0.659 |
| 50 | 50 | 0.672 |
| 51 | 51 | 0.621 |
| 52 | 52 | 0.788 |
| 53 | 53 | 0.547 |
| 54 | 54 | 0.857 |
| 55 | 55 | 0.931 |
| 56 | 56 | 0.531 |
| 57 | 57 | 0.128 |
| 58 | 58 | 0.426 |
| 59 | 59 | 0.211 |
| 6 | 6 | 0.344 |
| 60 | 60 | 0.538 |
| 61 | 61 | 0.596 |
| 62 | 62 | 0.951 |
| 63 | 63 | 0.226 |
| 64 | 64 | 0.494 |
| 65 | 65 | 0.138 |
| 66 | 66 | 0.134 |
| 67 | 67 | 0.762 |
| 68 | 68 | 0.0323 |
| 69 | 69 | 0.565 |
| 7 | 7 | 0.646 |
| 70 | 70 | 0.597 |
| 71 | 71 | 0.819 |
| 72 | 72 | 0.353 |
| 73 | 73 | 0.00496 |
| 74 | 74 | 0.531 |
| 75 | 75 | 0.611 |
| 76 | 76 | 0.433 |
| 77 | 77 | 0.211 |
| 78 | 78 | 0.46 |
| 79 | 79 | 0.572 |
| 8 | 8 | 0.00934 |
| 80 | 80 | 0.303 |
| 81 | 81 | 0.706 |
| 82 | 82 | 0.661 |
| 83 | 83 | 0.768 |
| 84 | 84 | 0.0663 |
| 85 | 85 | 0.346 |
| 86 | 86 | 0.79 |
| 87 | 87 | 0.152 |
| 88 | 88 | 0.55 |
| 89 | 89 | 0.205 |
| 9 | 9 | 0.209 |
| 90 | 90 | 0.12 |
| 91 | 91 | 0.497 |
| 92 | 92 | 0.405 |
| 93 | 93 | 0.49 |
| 94 | 94 | 0.966 |
| 95 | 95 | 0.118 |
| 96 | 96 | 0.143 |
| 97 | 97 | 0.681 |
| 98 | 98 | 0.179 |
| 99 | 99 | 0.00773 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12495
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000048 human endothelial cell of the aorta sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
1000413 (endothelial cell of artery)
0002544 (aortic endothelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0004573 (systemic artery)
0000487 (simple squamous epithelium)
0003509 (arterial blood vessel)
0004638 (blood vessel endothelium)
0003915 (endothelial tube)
0004700 (arterial system endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001917 (endothelium of artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000047 (human endothelial cell of the artery sample)
0000048 (human endothelial cell of the aorta sample)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)
