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{{f5samples
{{f5samples
|id=FF:11453-119A4
|DRA_sample_Accession=CAGE@SAMD00005472
|name=Bronchial Epithelial Cell, donor4
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005472
|sample_id=11453
|accession_numbers=CAGE;DRX008122;DRR008994;DRZ000419;DRZ001804;DRZ011769;DRZ013154
|rna_tube_id=119A4
|accession_numbers_RNASeq=sRNA-Seq;DRX037124;DRR041490;DRZ007132
|rna_box=119
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002048,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000064,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004802,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0009569,UBERON:0005178,UBERON:0000485,UBERON:0000072,UBERON:0005177,UBERON:0004807,UBERON:0004815,UBERON:0000117,UBERON:0000171,UBERON:0000115,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0007196,UBERON:0002031,UBERON:0002185,UBERON:0000065,UBERON:0001558,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915
|rna_position=A4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002202,CL:0000082,CL:0000255,CL:0002076,CL:0002632,CL:0002368,CL:0002328
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=1858
|rna_catalog_number=CA502-R10a
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=20 years old adult
|sample_tissue=lung
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=20
|sample_ethnicity=U
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=epithelial cell of lung, bronchial
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs12054,LSID838,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10008,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000082,CL:0000144,CL:0000220,CL:0000223,CL:0000255,CL:0000548,CL:0002076,CL:0002202,CL:0002321,CL:0002328,CL:0002368,CL:0002371,CL:0002632
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000065,UBERON:0000072,UBERON:0000077,UBERON:0000115,UBERON:0000118,UBERON:0000119,UBERON:0000170,UBERON:0000171,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000485,UBERON:0000490,UBERON:0000915,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0001558,UBERON:0002031,UBERON:0002048,UBERON:0002050,UBERON:0002185,UBERON:0002224,UBERON:0002532,UBERON:0003104,UBERON:0003258,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004802,UBERON:0004807,UBERON:0004815,UBERON:0004921,UBERON:0005153,UBERON:0005178,UBERON:0005181,UBERON:0005423,UBERON:0005597,UBERON:0005911,UBERON:0007026,UBERON:0007196,UBERON:0008947,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000015
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr17:7493405..7493419,-!p1@SOX15!2.59!385.24!SOX15;;chr1:6479968..6479986,-!p1@HES2!1.98!94.70!HES2;;chr15:83953397..83953425,-!p1@BNC1!1.79!69.88!BNC1;;chr1:209979467..209979494,-!p1@IRF6!1.76!63.44!IRF6;;chr1:209979411..209979433,-!p2@IRF6!1.70!49.65!IRF6;;chr11:34642612..34642646,+!p1@EHF!1.70!48.73!EHF;;chr3:111314186..111314204,-!p1@ZBED2!1.61!39.54!ZBED2;;chr5:134369905..134369972,-!p1@PITX1!1.60!57.92!PITX1;;chr6:34524093..34524135,-!p1@SPDEF!1.60!38.62!SPDEF;;chr12:54785074..54785122,-!p2@ZNF385A!1.59!57.00!ZNF385A;;chr12:54785054..54785072,-!p4@ZNF385A!1.59!43.21!ZNF385A;;chr6:34524049..34524089,-!p2@SPDEF!1.53!33.10!SPDEF;;chr6:10415276..10415341,-!p2@TFAP2A!1.47!34.94!TFAP2A;;chr4:57547454..57547469,-!p1@HOPX!1.47!28.50!HOPX;;chr11:65686802..65686818,+!p6@DRAP1!1.44!45.97!DRAP1;;chr6:10412600..10412637,-!p1@TFAP2A!1.41!40.45!TFAP2A;;chr6:34524025..34524045,-!p3@SPDEF!1.41!24.82!SPDEF;;chr22:19748231..19748317,+!p1@TBX1!1.40!23.90!TBX1;;chr17:7492684..7492778,-!p2@SOX15!1.39!48.73!SOX15;;chr3:189507432..189507459,+!p1@TP63!1.35!21.15!TP63;;chr11:120107344..120107351,+!p1@POU2F3!1.33!24.82!POU2F3;;chr8:10588010..10588030,-!p1@SOX7!1.33!20.23!SOX7;;chr5:134369879..134369898,-!p2@PITX1!1.20!14.71!PITX1;;chr11:129245526..129245553,+!p1@BARX2!1.20!14.71!BARX2;;chr5:2751762..2751784,-!p1@IRX2!1.14!12.87!IRX2;;chr19:45579725..45579743,-!p1@ZNF296!1.13!56.08!ZNF296;;chr14:38064429..38064486,-!p1@FOXA1!1.11!11.95!FOXA1;;chr14:90085820..90085840,-!p6@FOXN3!1.11!11.95!FOXN3;;chr19:45908292..45908374,-!p1@PPP1R13L!1.10!102.06!PPP1R13L;;chr2:46524897..46524911,+!p2@EPAS1!1.08!31.26!EPAS1;;chr6:10415484..10415508,-!p3@TFAP2A!1.08!11.03!TFAP2A;;chr12:27485762..27485776,+!p3@ARNTL2!1.05!27.58!ARNTL2;;chr11:34645791..34645836,+!p3@EHF!1.05!10.11!EHF;;chr14:37131058..37131139,+!p1@PAX9!1.05!10.11!PAX9;;chr1:2461692..2461710,-!p1@HES5!1.05!10.11!HES5;;chr15:101069113..101069169,-!p1@CERS3!1.05!10.11!CERS3;;chr13:73633131..73633149,+!p1@KLF5!1.02!102.06!KLF5;;chr11:65686732..65686756,+!p2@DRAP1!1.02!40.45!DRAP1;;chr17:45928443..45928473,-!p2@SP6!1.01!9.19!SP6;;chr17:8027418..8027432,-!p1@HES7!1.01!9.19!HES7;;chr2:122042770..122042785,-!p1@TFCP2L1!1.01!9.19!TFCP2L1;;chr8:128748308..128748324,+!p2@MYC!0.99!250.08!MYC;;chr1:37940170..37940190,+!p1@ZC3H12A!0.99!111.25!ZC3H12A;;chr8:128747661..128747703,+!p6@MYC!0.99!11.95!MYC;;chr8:49833948..49833973,-!p2@SNAI2!0.98!55.17!SNAI2;;chr1:24645832..24645853,+!p1@GRHL3!0.97!8.27!GRHL3;;chr17:7492979..7492991,-!p5@SOX15!0.97!8.27!SOX15;;chr1:8934931..8934947,-!p4@ENO1!0.93!25.74!ENO1;;chr17:80797886..80797906,-!p1@ZNF750!0.92!7.36!ZNF750;;chr11:34642656..34642667,+!p2@EHF!0.92!7.36!EHF;;chr2:113994526..113994556,-!p3@PAX8!0.92!7.36!PAX8;;chrY:21906594..21906622,-!p1@KDM5D!0.92!7.36!KDM5D;;chr12:66218598..66218645,+!p2@HMGA2!0.91!34.02!HMGA2;;chr14:21566731..21566836,-!p1@ZNF219!0.90!78.15!ZNF219;;chr12:66218255..66218304,+!p3@HMGA2!0.90!19.31!HMGA2;;chr22:21355865..21355886,-!p5@THAP7!0.87!7.36!THAP7;;chr2:45236540..45236577,-!p1@SIX2!0.87!6.44!SIX2;;chr3:111314230..111314241,-!p2@ZBED2!0.87!6.44!ZBED2;;chr17:45928521..45928539,-!p1@SP6!0.87!6.44!SP6;;chr1:201979703..201979721,+!p2@ELF3!0.87!6.44!ELF3;;chr6:10412576..10412599,-!p5@TFAP2A!0.87!6.44!TFAP2A;;chr6:10415263..10415274,-!p8@TFAP2A!0.87!6.44!TFAP2A;;chr20:42295745..42295765,+!p1@MYBL2!0.86!108.49!MYBL2;;chr16:54964740..54964789,+!p1@IRX5!0.86!9.19!IRX5;;chr12:7079780..7079791,-!p2@PHB2!0.85!34.02!PHB2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.84!453.27!TAX1BP3;;chr1:8926369..8926385,-!p12@ENO1!0.84!8.27!ENO1;;chr2:169312600..169312606,+!p2@CERS6!0.82!9.19!CERS6;;chr11:65667846..65667868,-!p1@FOSL1!0.81!157.22!FOSL1;;chr12:27485785..27485816,+!p1@ARNTL2!0.81!41.37!ARNTL2;;chr2:70314240..70314256,+!p4@PCBP1!0.81!11.95!PCBP1;;chr4:121843402..121843416,+!p4@PRDM5!0.81!5.52!PRDM5;;chr1:209979449..209979460,-!p3@IRF6!0.81!5.52!IRF6;;chr1:24645921..24645973,+!p2@GRHL3!0.81!5.52!GRHL3;;chr20:18038521..18038571,-!p1@OVOL2!0.81!5.52!OVOL2;;chr17:7492504..7492520,-!p3@SOX15!0.81!5.52!SOX15;;chr11:65554528..65554546,+!p1@OVOL1!0.81!5.52!OVOL1;;chr11:65554563..65554576,+!p2@OVOL1!0.81!5.52!OVOL1;;chr9:22447422..22447483,+!p1@DMRTA1!0.81!5.52!DMRTA1;;chr2:239756739..239756755,+!p2@TWIST2!0.79!9.19!TWIST2;;chr17:41623692..41623715,-!p1@ETV4!0.78!22.99!ETV4;;chr11:47236584..47236679,+!p1@DDB2!0.76!57.00!DDB2;;chr3:141121847..141121868,+!p5@ZBTB38!0.75!7.36!ZBTB38;;chr2:63277948..63277974,+!p1@OTX1!0.75!4.60!OTX1;;chr3:189507460..189507471,+!p3@TP63!0.75!4.60!TP63;;chr4:299227..299272,-!p1@ZNF732!0.75!4.60!ZNF732;;chr19:45579699..45579704,-!p3@ZNF296!0.75!4.60!ZNF296;;chr8:102504690..102504704,+!p3@GRHL2!0.75!4.60!GRHL2;;chr14:37051798..37051831,-!p1@NKX2-8!0.75!4.60!NKX2-8;;chr8:49833978..49833996,-!p1@SNAI2!0.74!102.06!SNAI2;;chr12:53625966..53626012,-!p2@RARG!0.74!12.87!RARG;;chr20:50721803..50721857,-!p2@ZFP64!0.74!7.36!ZFP64;;chr1:8938709..8938720,-!p3@ENO1!0.72!233.53!ENO1;;chr16:29818160..29818188,+!p6@MAZ!0.72!22.07!MAZ;;chr16:29818199..29818216,+!p11@MAZ!0.72!7.36!MAZ;;chr11:64073022..64073056,+!p1@ESRRA!0.71!55.17!ESRRA;;chr2:239756671..239756732,+!p1@TWIST2!0.71!14.71!TWIST2;;chr12:48298765..48298783,-!p2@VDR!0.71!9.19!VDR;;chr11:62369806..62369837,-!p8@MTA2!0.71!5.52!MTA2;;chr5:138609782..138609826,+!p5@MATR3!0.70!29.42!MATR3;;chr8:128747757..128747800,+!p7@MYC!0.69!5.52!MYC;;chr6:10412392..10412409,-!p4@TFAP2A!0.69!4.60!TFAP2A;;chr6:41040923..41040952,+!p2@NFYA!0.68!11.03!NFYA;;chr17:41623075..41623101,-!p9@ETV4!0.68!4.60!ETV4;;chr11:65686776..65686787,+!p9@DRAP1!0.68!4.60!DRAP1;;chr14:61116183..61116208,-!p1@SIX1!0.67!15.63!SIX1;;chr18:3448455..3448480,+!p5@TGIF1!0.67!7.36!TGIF1;;chr3:32023232..32023273,+!p1@ZNF860!0.67!5.52!ZNF860;;chr2:45236579..45236596,-!p2@SIX2!0.67!3.68!SIX2;;chr15:83953373..83953386,-!p2@BNC1!0.67!3.68!BNC1;;chr17:26833339..26833378,+!p1@FOXN1!0.67!3.68!FOXN1;;chr6:10413188..10413249,-!p7@TFAP2A!0.67!3.68!TFAP2A;;chr1:24646263..24646277,+!p4@GRHL3!0.67!3.68!GRHL3;;chr1:50889103..50889145,-!p1@DMRTA2!0.67!3.68!DMRTA2;;chr6:20402102..20402152,+!p1@E2F3!0.66!16.55!E2F3;;chr19:42636586..42636607,-!p1@POU2F2!0.66!11.03!POU2F2;;chr22:42229210..42229229,+!p3@SREBF2!0.66!9.19!SREBF2;;chr14:21566882..21566898,-!p3@ZNF219!0.66!5.52!ZNF219;;chr20:42295713..42295738,+!p2@MYBL2!0.64!22.99!MYBL2;;chr12:27485823..27485868,+!p2@ARNTL2!0.64!15.63!ARNTL2;;chr15:90544532..90544563,+!p1@ZNF710!0.64!7.36!ZNF710;;chr1:8924055..8924074,-!p9@ENO1!0.64!6.44!ENO1;;chr11:65687362..65687436,+!p3@DRAP1!0.63!17.47!DRAP1;;chr1:6640110..6640130,+!p2@ZBTB48!0.63!4.60!ZBTB48;;chr16:29817841..29817865,+!p1@MAZ!0.62!80.91!MAZ;;chr1:158979792..158979814,+!p2@IFI16!0.62!35.86!IFI16;;chr1:26496382..26496457,+!p1@ZNF593!0.61!224.34!ZNF593;;chr14:69262789..69262822,-!p2@ZFP36L1!0.61!9.19!ZFP36L1;;chr1:26496459..26496470,+!p2@ZNF593!0.61!6.44!ZNF593;;chr6:1312325..1312340,+!p1@FOXQ1!0.61!5.52!FOXQ1;;chr11:65687882..65687902,+!p10@DRAP1!0.61!4.60!DRAP1;;chr20:50808667..50808729,-!p3@ZFP64!0.60!6.44!ZFP64;;chr12:66218836..66218888,+!p1@HMGA2!0.59!33.10!HMGA2;;chr12:48298785..48298828,-!p1@VDR!0.59!18.39!VDR;;chr12:66218212..66218244,+!p5@HMGA2!0.59!4.60!HMGA2;;chr12:27485889..27485900,+!p4@ARNTL2!0.59!3.68!ARNTL2;;chr1:8938736..8938756,-!p1@ENO1!0.58!3848.70!ENO1;;chr1:8938766..8938774,-!p2@ENO1!0.58!237.21!ENO1;;chr19:19303731..19303783,+!p1@RFXANK!0.58!80.91!RFXANK;;chr11:46722560..46722595,+!p1@ZNF408!0.57!17.47!ZNF408;;chr11:47270436..47270464,+!p2@NR1H3!0.57!6.44!NR1H3;;chr12:66218378..66218401,+!p6@HMGA2!0.57!4.60!HMGA2;;chr11:65687222..65687240,+!p7@DRAP1!0.57!3.68!DRAP1;;chr20:55204351..55204377,+!p1@TFAP2C!0.57!3.68!TFAP2C;;chr1:209979375..209979386,-!p4@IRF6!0.57!2.76!IRF6;;chr20:18038486..18038520,-!p2@OVOL2!0.57!2.76!OVOL2;;chr20:22565185..22565223,-!p3@FOXA2!0.57!2.76!FOXA2;;chr20:22565370..22565388,-!p2@FOXA2!0.57!2.76!FOXA2;;chr20:55205825..55205847,+!p2@TFAP2C!0.57!2.76!TFAP2C;;chr11:128563652..128563689,+!p3@FLI1!0.57!2.76!FLI1;;chr11:129245736..129245758,+!p2@BARX2!0.57!2.76!BARX2;;chr14:38064307..38064323,-!p3@FOXA1!0.57!2.76!FOXA1;;chrY:2803415..2803468,+!p1@ZFY!0.57!2.76!ZFY;;chr5:2751785..2751808,-!p2@IRX2!0.57!2.76!IRX2;;chr5:3595934..3595957,+!p2@IRX1!0.57!2.76!IRX1;;chr5:50679228..50679288,+!p1@ISL1!0.57!2.76!ISL1;;chr6:10419768..10419819,-!p6@TFAP2A!0.57!2.76!TFAP2A;;chr6:10419824..10419840,-!p9@TFAP2A!0.57!2.76!TFAP2A;;chr8:123875175..123875188,+!p22@ZHX2!0.57!2.76!ZHX2;;chr8:128747729..128747748,+!p14@MYC!0.57!2.76!MYC;;chr9:100615499..100615519,+!p1@FOXE1!0.57!2.76!FOXE1;;chr15:83953474..83953483,-!p3@BNC1!0.57!2.76!BNC1;;chr2:113994491..113994515,-!p7@PAX8!0.57!2.76!PAX8;;chr3:181429704..181429722,+!p1@SOX2!0.57!2.76!SOX2;;chr6:34204642..34204664,+!p2@HMGA1!0.55!432.13!HMGA1;;chr11:64072981..64073005,+!p2@ESRRA!0.55!21.15!ESRRA;;chr17:41623667..41623682,-!p8@ETV4!0.55!2.76!ETV4;;chr19:56154958..56155027,+!p1@ZNF581!0.54!103.89!ZNF581;;chr6:34204973..34204990,+!p4@HMGA1!0.54!41.37!HMGA1;;chr12:53614115..53614154,-!p1@RARG!0.54!16.55!RARG;;chr12:10875351..10875422,-!p4@CSDA!0.54!5.52!CSDA;;chr17:61920116..61920131,-!p5@SMARCD2!0.54!5.52!SMARCD2;;chr16:67881588..67881612,-!p2@CENPT!0.54!3.68!CENPT;;chr1:149858461..149858479,+!p1@BOLA1!0.53!1206.28!BOLA1;;chr6:34204672..34204692,+!p1@HMGA1!0.53!349.38!HMGA1;;chr19:1863568..1863586,-!p1@KLF16!0.53!102.06!KLF16;;chr11:47235980..47236028,+!p3@DDB2!0.53!6.44!DDB2;;chr19:15543565..15543579,-!p2@WIZ!0.52!12.87!WIZ;;chr19:56135928..56135936,-!p1@ZNF784!0.52!11.03!ZNF784;;chr4:95128841..95128865,+!p4@SMARCAD1!0.52!5.52!SMARCAD1;;chr8:145159324..145159333,+!p5@MAF1!0.52!5.52!MAF1;;chr16:30407021..30407061,+!p3@ZNF48!0.52!2.76!ZNF48;;chr4:57522166..57522260,-!p2@HOPX!0.52!2.76!HOPX;;chr22:41864662..41864708,-!p1@PHF5A!0.51!125.96!PHF5A;;chr16:3162557..3162600,+!p1@ZNF205!0.51!24.82!ZNF205;;chr11:128392273..128392308,-!p2@ETS1!0.51!11.95!ETS1;;chr1:45805872..45805900,+!p2@TOE1!0.51!6.44!TOE1;;chr1:154975110..154975149,+!p2@ZBTB7B!0.51!5.52!ZBTB7B;;chr1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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000082;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000223;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002328;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002368;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002632;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000065;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000485;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001558;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002048;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002185;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004807;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005153;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005157;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005181;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005911;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0008947
|ffid_belonging_in_development=CL:0000223
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
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|rna_box=119
|rna_catalog_number=CA502-R10a
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=1858
|rna_od260/230=
|rna_od260/280=
|rna_position=A4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=119A4
|rna_weight_ug=10
|rnaseq_library_id=SRhi10008.GTGAAA
|sample_age=20
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=epithelial cell of lung, bronchial
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=20 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=U
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.46809720034502e-228!GO:0005737;cytoplasm;3.59685072799206e-198!GO:0043226;organelle;3.01657517571332e-176!GO:0043229;intracellular organelle;7.48607864458825e-176!GO:0043231;intracellular membrane-bound organelle;4.01684996500371e-160!GO:0043227;membrane-bound organelle;6.50729685158697e-160!GO:0044422;organelle part;1.08509934542441e-148!GO:0044446;intracellular organelle part;2.75149949218336e-147!GO:0044444;cytoplasmic part;4.52588778844915e-133!GO:0032991;macromolecular complex;3.23162328276555e-103!GO:0030529;ribonucleoprotein complex;2.789403775057e-94!GO:0044237;cellular metabolic process;8.23017774272757e-83!GO:0005739;mitochondrion;5.64431299983152e-80!GO:0044238;primary metabolic process;1.10398919356062e-79!GO:0005515;protein binding;9.26758487391841e-71!GO:0043233;organelle lumen;9.60626281132215e-70!GO:0031974;membrane-enclosed lumen;9.60626281132215e-70!GO:0043170;macromolecule metabolic process;1.60965445635639e-68!GO:0044428;nuclear part;1.19017928718189e-65!GO:0003723;RNA binding;2.79265494108213e-62!GO:0005840;ribosome;6.89725017427717e-62!GO:0006412;translation;2.55368428577007e-58!GO:0009058;biosynthetic process;2.3456825061177e-56!GO:0003735;structural constituent of ribosome;4.80076659571968e-55!GO:0005634;nucleus;1.54399507471976e-54!GO:0019538;protein metabolic process;2.70177238491285e-53!GO:0044249;cellular biosynthetic process;6.67323692495847e-52!GO:0044429;mitochondrial part;2.77836268918727e-51!GO:0043234;protein complex;8.68011107404757e-51!GO:0031090;organelle membrane;2.13703861679167e-49!GO:0043228;non-membrane-bound organelle;3.39439188730379e-47!GO:0043232;intracellular non-membrane-bound organelle;3.39439188730379e-47!GO:0006396;RNA processing;3.74163553573033e-47!GO:0044267;cellular protein metabolic process;1.04462807378749e-46!GO:0033279;ribosomal subunit;1.04462807378749e-46!GO:0009059;macromolecule biosynthetic process;1.43930161146678e-46!GO:0044260;cellular macromolecule metabolic process;1.831591947562e-46!GO:0005829;cytosol;6.22382085588969e-44!GO:0031967;organelle envelope;2.15810222010361e-42!GO:0031975;envelope;5.10963279816136e-42!GO:0016043;cellular component organization and biogenesis;5.53623888635496e-42!GO:0031981;nuclear lumen;2.82164905006757e-40!GO:0015031;protein transport;6.39571780359988e-39!GO:0033036;macromolecule localization;6.60358016412377e-38!GO:0065003;macromolecular complex assembly;1.19126954347274e-35!GO:0045184;establishment of protein localization;1.26672458475025e-35!GO:0008104;protein localization;1.43752662782512e-35!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.48856821238407e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.87959543768383e-33!GO:0005740;mitochondrial envelope;1.31270587663377e-32!GO:0043283;biopolymer metabolic process;1.74955977149485e-32!GO:0016071;mRNA metabolic process;1.92965392367943e-32!GO:0008380;RNA splicing;7.46525633338285e-32!GO:0022607;cellular component assembly;4.42146349981811e-31!GO:0006996;organelle organization and biogenesis;6.46728086302284e-31!GO:0046907;intracellular transport;3.35032211702018e-30!GO:0031966;mitochondrial membrane;3.42424821927199e-30!GO:0006397;mRNA processing;1.66310608060174e-28!GO:0019866;organelle inner membrane;3.09754944934787e-28!GO:0006259;DNA metabolic process;1.75360729660228e-27!GO:0044445;cytosolic part;2.10568583468784e-27!GO:0006886;intracellular protein transport;4.82976144461431e-27!GO:0010467;gene expression;6.96468107909672e-27!GO:0005743;mitochondrial inner membrane;1.65118940807566e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.30939040578802e-25!GO:0015934;large ribosomal subunit;2.60023071571184e-24!GO:0015935;small ribosomal subunit;1.86996426939509e-23!GO:0006119;oxidative phosphorylation;1.97783970204057e-23!GO:0007049;cell cycle;3.65730683463872e-23!GO:0031980;mitochondrial lumen;3.65730683463872e-23!GO:0005759;mitochondrial matrix;3.65730683463872e-23!GO:0005681;spliceosome;6.7308939075815e-23!GO:0005654;nucleoplasm;1.7089622935828e-22!GO:0044455;mitochondrial membrane part;4.08811081955989e-22!GO:0000166;nucleotide binding;1.73265566899402e-20!GO:0016462;pyrophosphatase activity;2.68167548273502e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.64346578489037e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;4.36046369459874e-20!GO:0005730;nucleolus;1.74007155850822e-19!GO:0051649;establishment of cellular localization;3.20094243074622e-19!GO:0051641;cellular localization;3.75625317160474e-19!GO:0017111;nucleoside-triphosphatase activity;5.16941609832889e-19!GO:0012505;endomembrane system;1.50736286032005e-18!GO:0051186;cofactor metabolic process;2.12869682370945e-18!GO:0006457;protein folding;6.52688765061081e-18!GO:0022402;cell cycle process;1.02867129941372e-17!GO:0005746;mitochondrial respiratory chain;1.10182048730046e-17!GO:0005761;mitochondrial ribosome;1.346637002226e-17!GO:0000313;organellar ribosome;1.346637002226e-17!GO:0044451;nucleoplasm part;2.12783313871237e-17!GO:0022618;protein-RNA complex assembly;3.47210750813326e-17!GO:0000278;mitotic cell cycle;4.33898958612472e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.21610671686347e-17!GO:0005783;endoplasmic reticulum;6.8166658525449e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.9303611304368e-17!GO:0016874;ligase activity;9.06357397160365e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.68835203394463e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.00882146947942e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.14018076875834e-16!GO:0003954;NADH dehydrogenase activity;2.14018076875834e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.14018076875834e-16!GO:0042254;ribosome biogenesis and assembly;2.84637727805285e-16!GO:0048770;pigment granule;1.10828214261535e-15!GO:0042470;melanosome;1.10828214261535e-15!GO:0043285;biopolymer catabolic process;2.53095270069543e-15!GO:0006605;protein targeting;2.83952111584006e-15!GO:0006974;response to DNA damage stimulus;2.95031247902907e-15!GO:0032553;ribonucleotide binding;3.21938451164263e-15!GO:0032555;purine ribonucleotide binding;3.21938451164263e-15!GO:0017076;purine nucleotide binding;3.56191071250235e-15!GO:0009057;macromolecule catabolic process;5.15492994103527e-15!GO:0006732;coenzyme metabolic process;5.55597839808466e-15!GO:0044248;cellular catabolic process;5.58271693751024e-15!GO:0044265;cellular macromolecule catabolic process;5.58925862040768e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.06049069828721e-15!GO:0030964;NADH dehydrogenase complex (quinone);2.08847352590864e-14!GO:0045271;respiratory chain complex I;2.08847352590864e-14!GO:0005747;mitochondrial respiratory chain complex I;2.08847352590864e-14!GO:0012501;programmed cell death;2.43608858586078e-14!GO:0006512;ubiquitin cycle;2.57940367177743e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.77419017789852e-14!GO:0042773;ATP synthesis coupled electron transport;2.77419017789852e-14!GO:0044432;endoplasmic reticulum part;2.98242398197334e-14!GO:0006915;apoptosis;4.56926094854086e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.78654667705696e-14!GO:0008135;translation factor activity, nucleic acid binding;1.04858362559103e-13!GO:0009055;electron carrier activity;1.18565963190164e-13!GO:0043412;biopolymer modification;1.25611329582423e-13!GO:0005694;chromosome;2.13362277850152e-13!GO:0006399;tRNA metabolic process;2.13971449255745e-13!GO:0051082;unfolded protein binding;3.34550789743913e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;4.74765607810731e-13!GO:0000087;M phase of mitotic cell cycle;5.17909613106497e-13!GO:0005524;ATP binding;6.22907424933583e-13!GO:0007067;mitosis;6.46399815483515e-13!GO:0032559;adenyl ribonucleotide binding;6.62913057736102e-13!GO:0019941;modification-dependent protein catabolic process;7.1897227907004e-13!GO:0043632;modification-dependent macromolecule catabolic process;7.1897227907004e-13!GO:0030163;protein catabolic process;8.12388584078569e-13!GO:0030554;adenyl nucleotide binding;1.0280970923252e-12!GO:0044257;cellular protein catabolic process;1.04658219757862e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.30026458032333e-12!GO:0022403;cell cycle phase;1.93846242292035e-12!GO:0006281;DNA repair;2.18450682003175e-12!GO:0008219;cell death;2.20843010419869e-12!GO:0016265;death;2.20843010419869e-12!GO:0044427;chromosomal part;2.28056233158913e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;2.34295504990856e-12!GO:0000375;RNA splicing, via transesterification reactions;2.34295504990856e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.34295504990856e-12!GO:0006464;protein modification process;4.12992834426352e-12!GO:0008134;transcription factor binding;5.46578213981027e-12!GO:0006461;protein complex assembly;8.52084318450735e-12!GO:0005794;Golgi apparatus;9.36832518144368e-12!GO:0009719;response to endogenous stimulus;1.23082617634591e-11!GO:0009259;ribonucleotide metabolic process;1.39389952212695e-11!GO:0006260;DNA replication;1.76327336622592e-11!GO:0048193;Golgi vesicle transport;2.39098797964905e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.62212509231619e-11!GO:0000074;regulation of progression through cell cycle;3.71894465076071e-11!GO:0006364;rRNA processing;3.99541608627113e-11!GO:0003743;translation initiation factor activity;4.94010153845512e-11!GO:0005789;endoplasmic reticulum membrane;5.17908117949024e-11!GO:0051726;regulation of cell cycle;5.29328623750559e-11!GO:0006413;translational initiation;6.01678460703031e-11!GO:0016072;rRNA metabolic process;6.67516867154673e-11!GO:0006163;purine nucleotide metabolic process;8.03127243113555e-11!GO:0051276;chromosome organization and biogenesis;1.16390380501405e-10!GO:0009150;purine ribonucleotide metabolic process;1.17802625293216e-10!GO:0051188;cofactor biosynthetic process;1.19843170479576e-10!GO:0005635;nuclear envelope;1.34433879516924e-10!GO:0043067;regulation of programmed cell death;1.36900387946288e-10!GO:0042981;regulation of apoptosis;1.59505834333939e-10!GO:0016491;oxidoreductase activity;1.78680443908947e-10!GO:0009141;nucleoside triphosphate metabolic process;2.09330671727074e-10!GO:0009260;ribonucleotide biosynthetic process;2.61628952125171e-10!GO:0009056;catabolic process;2.83322511366206e-10!GO:0016887;ATPase activity;2.83322511366206e-10!GO:0042623;ATPase activity, coupled;2.85326301652486e-10!GO:0000279;M phase;2.85326301652486e-10!GO:0043687;post-translational protein modification;3.40063208163258e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;5.38327667414705e-10!GO:0006164;purine nucleotide biosynthetic process;6.4119342239647e-10!GO:0009199;ribonucleoside triphosphate metabolic process;7.6957384689646e-10!GO:0031965;nuclear membrane;8.30705840118466e-10!GO:0003676;nucleic acid binding;8.30705840118466e-10!GO:0006446;regulation of translational initiation;8.94036368002425e-10!GO:0009152;purine ribonucleotide biosynthetic process;8.99327551587593e-10!GO:0008565;protein transporter activity;9.02781337662747e-10!GO:0044453;nuclear membrane part;1.18445764298957e-09!GO:0051301;cell division;1.55127739249133e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.5612745554521e-09!GO:0006323;DNA packaging;1.5612745554521e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.73275107932053e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.73275107932053e-09!GO:0016604;nuclear body;1.84674066482481e-09!GO:0009142;nucleoside triphosphate biosynthetic process;1.984914863964e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.984914863964e-09!GO:0006913;nucleocytoplasmic transport;2.01833859725516e-09!GO:0000785;chromatin;2.30267326137044e-09!GO:0007005;mitochondrion organization and biogenesis;2.47264529702687e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.79089438615864e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.79089438615864e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.79089438615864e-09!GO:0016192;vesicle-mediated transport;2.87924227173872e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.2298206463653e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.91572584210713e-09!GO:0065004;protein-DNA complex assembly;4.07534766808834e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.5839961645453e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.5839961645453e-09!GO:0051169;nuclear transport;4.78322274031788e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.44210022599301e-09!GO:0016740;transferase activity;8.77060804633184e-09!GO:0043038;amino acid activation;9.09373547814196e-09!GO:0006418;tRNA aminoacylation for protein translation;9.09373547814196e-09!GO:0043039;tRNA aminoacylation;9.09373547814196e-09!GO:0017038;protein import;1.06372729038557e-08!GO:0016787;hydrolase activity;1.43567024476022e-08!GO:0006334;nucleosome assembly;1.54356922936346e-08!GO:0006333;chromatin assembly or disassembly;1.58650303043506e-08!GO:0015986;ATP synthesis coupled proton transport;1.58650303043506e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.58650303043506e-08!GO:0009108;coenzyme biosynthetic process;1.62861363192947e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.96048089557319e-08!GO:0031497;chromatin assembly;3.66885880206528e-08!GO:0016779;nucleotidyltransferase activity;3.80795268623697e-08!GO:0043069;negative regulation of programmed cell death;3.81703975133763e-08!GO:0009117;nucleotide metabolic process;4.67423089007582e-08!GO:0030120;vesicle coat;5.88637446236819e-08!GO:0030662;coated vesicle membrane;5.88637446236819e-08!GO:0005793;ER-Golgi intermediate compartment;6.18313218695921e-08!GO:0046034;ATP metabolic process;6.63663801552541e-08!GO:0005643;nuclear pore;7.09705526037151e-08!GO:0005768;endosome;9.32203603935259e-08!GO:0004386;helicase activity;9.38473287574874e-08!GO:0043066;negative regulation of apoptosis;9.387797910155e-08!GO:0048475;coated membrane;9.80136719894307e-08!GO:0030117;membrane coat;9.80136719894307e-08!GO:0008639;small protein conjugating enzyme activity;9.82463541456344e-08!GO:0016070;RNA metabolic process;1.13008687252103e-07!GO:0065002;intracellular protein transport across a membrane;1.37365609377725e-07!GO:0006754;ATP biosynthetic process;1.63528874077584e-07!GO:0006753;nucleoside phosphate metabolic process;1.63528874077584e-07!GO:0003712;transcription cofactor activity;1.86117414177492e-07!GO:0006916;anti-apoptosis;1.98176626455593e-07!GO:0004842;ubiquitin-protein ligase activity;2.51325162713006e-07!GO:0019787;small conjugating protein ligase activity;2.58833022985501e-07!GO:0009060;aerobic respiration;2.59707465462434e-07!GO:0005762;mitochondrial large ribosomal subunit;2.6611335133442e-07!GO:0000315;organellar large ribosomal subunit;2.6611335133442e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.87114024863232e-07!GO:0008026;ATP-dependent helicase activity;3.00678371160894e-07!GO:0003924;GTPase activity;3.79090441307466e-07!GO:0006752;group transfer coenzyme metabolic process;3.79365104642006e-07!GO:0006091;generation of precursor metabolites and energy;4.36030948775533e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.1458200936669e-07!GO:0019829;cation-transporting ATPase activity;5.6961896493285e-07!GO:0048523;negative regulation of cellular process;5.6961896493285e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.74705587808664e-07!GO:0051246;regulation of protein metabolic process;6.04227310586672e-07!GO:0016607;nuclear speck;6.37986555855437e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.12967868464478e-07!GO:0046930;pore complex;9.14394541030055e-07!GO:0016881;acid-amino acid ligase activity;1.11913539478173e-06!GO:0043623;cellular protein complex assembly;1.16116697368805e-06!GO:0045259;proton-transporting ATP synthase complex;1.21027206345391e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.22106440759651e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.23396926105981e-06!GO:0004298;threonine endopeptidase activity;1.51004885816791e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.80771613435613e-06!GO:0045333;cellular respiration;2.99732501590258e-06!GO:0016853;isomerase activity;3.32656044865174e-06!GO:0003899;DNA-directed RNA polymerase activity;4.3745225016804e-06!GO:0006793;phosphorus metabolic process;5.27640743789575e-06!GO:0006796;phosphate metabolic process;5.27640743789575e-06!GO:0006099;tricarboxylic acid cycle;6.13205503995134e-06!GO:0046356;acetyl-CoA catabolic process;6.13205503995134e-06!GO:0048519;negative regulation of biological process;6.17538410012835e-06!GO:0000245;spliceosome assembly;6.73776595663583e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.84744049364381e-06!GO:0003697;single-stranded DNA binding;7.18297271878185e-06!GO:0008654;phospholipid biosynthetic process;8.489652254547e-06!GO:0008033;tRNA processing;8.83032553978077e-06!GO:0042802;identical protein binding;8.83929140561784e-06!GO:0006084;acetyl-CoA metabolic process;1.02789850151293e-05!GO:0000786;nucleosome;1.11829669792907e-05!GO:0051187;cofactor catabolic process;1.3236027105017e-05!GO:0008610;lipid biosynthetic process;1.32711551779936e-05!GO:0016126;sterol biosynthetic process;1.3290206389735e-05!GO:0051170;nuclear import;1.37884614739386e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.44554938791866e-05!GO:0043566;structure-specific DNA binding;1.49289353021893e-05!GO:0032446;protein modification by small protein conjugation;1.59565604464632e-05!GO:0000314;organellar small ribosomal subunit;1.61537690346598e-05!GO:0005763;mitochondrial small ribosomal subunit;1.61537690346598e-05!GO:0015630;microtubule cytoskeleton;1.66704391727038e-05!GO:0050657;nucleic acid transport;1.77551149716451e-05!GO:0051236;establishment of RNA localization;1.77551149716451e-05!GO:0050658;RNA transport;1.77551149716451e-05!GO:0006403;RNA localization;2.04891032536093e-05!GO:0009109;coenzyme catabolic process;2.07628765259804e-05!GO:0006366;transcription from RNA polymerase II promoter;2.14063238385804e-05!GO:0016567;protein ubiquitination;2.14518962172719e-05!GO:0048522;positive regulation of cellular process;2.25869932412563e-05!GO:0006606;protein import into nucleus;2.27642008571217e-05!GO:0016310;phosphorylation;2.86089175152424e-05!GO:0044431;Golgi apparatus part;2.9063874038617e-05!GO:0019843;rRNA binding;2.91422576188966e-05!GO:0044440;endosomal part;3.61844955424563e-05!GO:0010008;endosome membrane;3.61844955424563e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.28997677645047e-05!GO:0006082;organic acid metabolic process;5.8836090143034e-05!GO:0005770;late endosome;6.29812352468015e-05!GO:0044452;nucleolar part;7.21406315544329e-05!GO:0019752;carboxylic acid metabolic process;7.43055886751097e-05!GO:0005525;GTP binding;7.44354625587803e-05!GO:0065009;regulation of a molecular function;7.44798897747383e-05!GO:0006261;DNA-dependent DNA replication;8.27639965954712e-05!GO:0031968;organelle outer membrane;8.81424125030681e-05!GO:0045454;cell redox homeostasis;8.97407956043291e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.16488356736112e-05!GO:0045786;negative regulation of progression through cell cycle;9.38478090752947e-05!GO:0051329;interphase of mitotic cell cycle;0.000102230175192974!GO:0005819;spindle;0.000107329028032453!GO:0006613;cotranslational protein targeting to membrane;0.000113909132736709!GO:0007088;regulation of mitosis;0.000115047299327659!GO:0019867;outer membrane;0.000119957771736395!GO:0005667;transcription factor complex;0.000121137646288081!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000127384869619289!GO:0016568;chromatin modification;0.000139289615442368!GO:0030118;clathrin coat;0.00014256509372449!GO:0003724;RNA helicase activity;0.000155617145810133!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000155915006953909!GO:0031252;leading edge;0.000169007908452382!GO:0005741;mitochondrial outer membrane;0.000178913962103284!GO:0006626;protein targeting to mitochondrion;0.000197929938860426!GO:0019899;enzyme binding;0.000203663187983841!GO:0046474;glycerophospholipid biosynthetic process;0.000203663187983841!GO:0006695;cholesterol biosynthetic process;0.00021038337900276!GO:0051427;hormone receptor binding;0.00021660477284996!GO:0051325;interphase;0.000220900750311511!GO:0005788;endoplasmic reticulum lumen;0.000221576626847323!GO:0000139;Golgi membrane;0.000233036497028784!GO:0043021;ribonucleoprotein binding;0.000259144983863178!GO:0030867;rough endoplasmic reticulum membrane;0.000274712807154465!GO:0030132;clathrin coat of coated pit;0.000283897480258679!GO:0005905;coated pit;0.000286486927949895!GO:0009165;nucleotide biosynthetic process;0.000288965757502878!GO:0051028;mRNA transport;0.000301528930626728!GO:0009967;positive regulation of signal transduction;0.000319717651617205!GO:0043681;protein import into mitochondrion;0.000336653485242904!GO:0016023;cytoplasmic membrane-bound vesicle;0.000342293704620131!GO:0006839;mitochondrial transport;0.000365958678030815!GO:0007006;mitochondrial membrane organization and biogenesis;0.00038076918641044!GO:0000151;ubiquitin ligase complex;0.000383154387903639!GO:0003684;damaged DNA binding;0.000389253665886447!GO:0005813;centrosome;0.000411275216563201!GO:0031988;membrane-bound vesicle;0.000412602137440772!GO:0006118;electron transport;0.000412784142408448!GO:0035257;nuclear hormone receptor binding;0.000428588326950064!GO:0000075;cell cycle checkpoint;0.00043306435947446!GO:0048471;perinuclear region of cytoplasm;0.000458921111480523!GO:0005769;early endosome;0.000465027711728694!GO:0005798;Golgi-associated vesicle;0.000467946721902852!GO:0008632;apoptotic program;0.000480153365878076!GO:0005773;vacuole;0.000567643698285945!GO:0043065;positive regulation of apoptosis;0.000587603919137684!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000615220850022001!GO:0003713;transcription coactivator activity;0.000663232481644322!GO:0030119;AP-type membrane coat adaptor complex;0.000682554750818563!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000688935011561999!GO:0005791;rough endoplasmic reticulum;0.000688999766029979!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000691406603247643!GO:0043068;positive regulation of programmed cell death;0.000695580689397043!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000703060196786799!GO:0006979;response to oxidative stress;0.000707584436367978!GO:0046489;phosphoinositide biosynthetic process;0.000735258922375826!GO:0005815;microtubule organizing center;0.000809806341690749!GO:0032561;guanyl ribonucleotide binding;0.000817465562488984!GO:0019001;guanyl nucleotide binding;0.000817465562488984!GO:0030131;clathrin adaptor complex;0.000878328538462193!GO:0051920;peroxiredoxin activity;0.000917498913431454!GO:0030658;transport vesicle membrane;0.000968083533152274!GO:0030176;integral to endoplasmic reticulum membrane;0.000968083533152274!GO:0030880;RNA polymerase complex;0.000977345392700909!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00100832871785085!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00100843823613173!GO:0007243;protein kinase cascade;0.00101901591796033!GO:0030125;clathrin vesicle coat;0.00109936493707235!GO:0030665;clathrin coated vesicle membrane;0.00109936493707235!GO:0033116;ER-Golgi intermediate compartment membrane;0.0011046082253274!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00111917129949262!GO:0048518;positive regulation of biological process;0.00114017597465238!GO:0006520;amino acid metabolic process;0.0011611112123188!GO:0005885;Arp2/3 protein complex;0.00120084268768704!GO:0015992;proton transport;0.00125268108481423!GO:0006383;transcription from RNA polymerase III promoter;0.00126289241484692!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00126289241484692!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00126289241484692!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00126289241484692!GO:0016859;cis-trans isomerase activity;0.00133289612181415!GO:0006612;protein targeting to membrane;0.00133462055570214!GO:0016044;membrane organization and biogenesis;0.00135336110414028!GO:0006818;hydrogen transport;0.00151863702292167!GO:0050662;coenzyme binding;0.00155282962135222!GO:0005856;cytoskeleton;0.00158861630615496!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00160969197233044!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00161215878143301!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00161694721541687!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00162363121819075!GO:0015399;primary active transmembrane transporter activity;0.00162363121819075!GO:0008250;oligosaccharyl transferase complex;0.00163508045940172!GO:0006414;translational elongation;0.00170331129189163!GO:0003714;transcription corepressor activity;0.00174606513999052!GO:0006950;response to stress;0.00174624847895086!GO:0004576;oligosaccharyl transferase activity;0.0017536040689084!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00183910738245692!GO:0031324;negative regulation of cellular metabolic process;0.00185874145640579!GO:0046483;heterocycle metabolic process;0.00187693222089285!GO:0048144;fibroblast proliferation;0.00194135635936711!GO:0048145;regulation of fibroblast proliferation;0.00194135635936711!GO:0005657;replication fork;0.00194135635936711!GO:0004518;nuclease activity;0.00196051802761791!GO:0051252;regulation of RNA metabolic process;0.00205477135705193!GO:0008094;DNA-dependent ATPase activity;0.00210170558922751!GO:0000775;chromosome, pericentric region;0.00212932660622577!GO:0048468;cell development;0.00217061826351391!GO:0008186;RNA-dependent ATPase activity;0.00217540608759658!GO:0005684;U2-dependent spliceosome;0.00228431583359676!GO:0003729;mRNA binding;0.0023864628203454!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00239490631750824!GO:0000428;DNA-directed RNA polymerase complex;0.00239490631750824!GO:0046467;membrane lipid biosynthetic process;0.00241469278933025!GO:0016564;transcription repressor activity;0.00241802129590013!GO:0048146;positive regulation of fibroblast proliferation;0.00242990884662649!GO:0007051;spindle organization and biogenesis;0.002430302259627!GO:0015980;energy derivation by oxidation of organic compounds;0.00252119987498568!GO:0000323;lytic vacuole;0.00255496468167074!GO:0005764;lysosome;0.00255496468167074!GO:0031982;vesicle;0.00260069288881027!GO:0048037;cofactor binding;0.00261108584102335!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00263971337349472!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00263971337349472!GO:0005048;signal sequence binding;0.00265936726119418!GO:0030660;Golgi-associated vesicle membrane;0.0026903389543933!GO:0016125;sterol metabolic process;0.00271265213826991!GO:0031410;cytoplasmic vesicle;0.00273544553015674!GO:0016363;nuclear matrix;0.00279367430425496!GO:0003690;double-stranded DNA binding;0.00283785139978178!GO:0050794;regulation of cellular process;0.00283785139978178!GO:0043488;regulation of mRNA stability;0.0029616485826591!GO:0043487;regulation of RNA stability;0.0029616485826591!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0030259577790845!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00307658209064036!GO:0050790;regulation of catalytic activity;0.00311792142536556!GO:0016563;transcription activator activity;0.0031286388357608!GO:0006650;glycerophospholipid metabolic process;0.003204261945071!GO:0031072;heat shock protein binding;0.00363564011277666!GO:0007010;cytoskeleton organization and biogenesis;0.00375376880488018!GO:0044255;cellular lipid metabolic process;0.00379440045527554!GO:0008139;nuclear localization sequence binding;0.00383569869229461!GO:0008092;cytoskeletal protein binding;0.00399183080571176!GO:0006402;mRNA catabolic process;0.00401105857782629!GO:0006595;polyamine metabolic process;0.0040724979078408!GO:0030036;actin cytoskeleton organization and biogenesis;0.00411771305080639!GO:0006917;induction of apoptosis;0.00417356621317077!GO:0004527;exonuclease activity;0.00423894899994667!GO:0030031;cell projection biogenesis;0.00428224426673764!GO:0051540;metal cluster binding;0.00437349720029365!GO:0051536;iron-sulfur cluster binding;0.00437349720029365!GO:0000059;protein import into nucleus, docking;0.00446056178492636!GO:0008637;apoptotic mitochondrial changes;0.0045349189589359!GO:0007264;small GTPase mediated signal transduction;0.00458870482111735!GO:0006289;nucleotide-excision repair;0.00461328191363877!GO:0000049;tRNA binding;0.0046181068558039!GO:0044262;cellular carbohydrate metabolic process;0.00468157766546943!GO:0004004;ATP-dependent RNA helicase activity;0.0046898407055985!GO:0051098;regulation of binding;0.00473125897677642!GO:0001726;ruffle;0.0047969116895566!GO:0051168;nuclear export;0.00484928106388986!GO:0006730;one-carbon compound metabolic process;0.00487574732156959!GO:0008629;induction of apoptosis by intracellular signals;0.00491327464753368!GO:0016272;prefoldin complex;0.0050389278836714!GO:0006401;RNA catabolic process;0.00521034683104258!GO:0006066;alcohol metabolic process;0.00529885041245837!GO:0012502;induction of programmed cell death;0.00546102324153291!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00553497290391178!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00556629916294826!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00606043902428545!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00614809912278444!GO:0006284;base-excision repair;0.00614809912278444!GO:0051789;response to protein stimulus;0.00628027154538843!GO:0006986;response to unfolded protein;0.00628027154538843!GO:0030384;phosphoinositide metabolic process;0.00668097690559326!GO:0009116;nucleoside metabolic process;0.0068506212747689!GO:0009892;negative regulation of metabolic process;0.00717880495269592!GO:0032508;DNA duplex unwinding;0.00729039171910111!GO:0032392;DNA geometric change;0.00729039171910111!GO:0017166;vinculin binding;0.00733093578829117!GO:0030663;COPI coated vesicle membrane;0.00736594866859736!GO:0030126;COPI vesicle coat;0.00736594866859736!GO:0051101;regulation of DNA binding;0.00736594866859736!GO:0018196;peptidyl-asparagine modification;0.00736594866859736!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00736594866859736!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00743626746127525!GO:0006506;GPI anchor biosynthetic process;0.00751123664846964!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00758291270459!GO:0005149;interleukin-1 receptor binding;0.00766721381952293!GO:0006778;porphyrin metabolic process;0.0077957465749083!GO:0033013;tetrapyrrole metabolic process;0.0077957465749083!GO:0015631;tubulin binding;0.00814412865727128!GO:0000287;magnesium ion binding;0.00817057843821!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00849458257958133!GO:0015002;heme-copper terminal oxidase activity;0.00849458257958133!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00849458257958133!GO:0004129;cytochrome-c oxidase activity;0.00849458257958133!GO:0030659;cytoplasmic vesicle membrane;0.00850339837403674!GO:0046822;regulation of nucleocytoplasmic transport;0.00860994230420045!GO:0016741;transferase activity, transferring one-carbon groups;0.00878749457868663!GO:0008168;methyltransferase activity;0.00886416752573197!GO:0006007;glucose catabolic process;0.00912285947000417!GO:0048500;signal recognition particle;0.00947789984222747!GO:0043284;biopolymer biosynthetic process;0.00991048170307531!GO:0043022;ribosome binding;0.0101039228881541!GO:0051087;chaperone binding;0.0103712414862006!GO:0030133;transport vesicle;0.0105416885649581!GO:0006611;protein export from nucleus;0.0105416885649581!GO:0008180;signalosome;0.0108545162651904!GO:0043492;ATPase activity, coupled to movement of substances;0.0108753838406923!GO:0051052;regulation of DNA metabolic process;0.011016765326557!GO:0031902;late endosome membrane;0.0110311447920522!GO:0006505;GPI anchor metabolic process;0.0110848383257359!GO:0051287;NAD binding;0.0112584317018972!GO:0006268;DNA unwinding during replication;0.0115038657358076!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0116611173598579!GO:0005874;microtubule;0.0117193186817681!GO:0007093;mitotic cell cycle checkpoint;0.0120997395311176!GO:0003746;translation elongation factor activity;0.0127777958427993!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0128205209624612!GO:0031529;ruffle organization and biogenesis;0.0130930974205785!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0133007667537208!GO:0006302;double-strand break repair;0.0133491636107623!GO:0030137;COPI-coated vesicle;0.0133966534417081!GO:0005637;nuclear inner membrane;0.0134256412904445!GO:0009451;RNA modification;0.0134606468067277!GO:0005832;chaperonin-containing T-complex;0.0135208109941565!GO:0006779;porphyrin biosynthetic process;0.0143217757470233!GO:0033014;tetrapyrrole biosynthetic process;0.0143217757470233!GO:0001836;release of cytochrome c from mitochondria;0.0147499861399566!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0148478145234808!GO:0006749;glutathione metabolic process;0.0150221564564378!GO:0008022;protein C-terminus binding;0.0151861743177739!GO:0000082;G1/S transition of mitotic cell cycle;0.0153641837642505!GO:0030029;actin filament-based process;0.0153641837642505!GO:0006891;intra-Golgi vesicle-mediated transport;0.0155131827971713!GO:0003711;transcription elongation regulator activity;0.0155891520301803!GO:0006733;oxidoreduction coenzyme metabolic process;0.0157600123785887!GO:0051539;4 iron, 4 sulfur cluster binding;0.0158210527664209!GO:0009166;nucleotide catabolic process;0.0162304504503541!GO:0008312;7S RNA binding;0.0162340670689547!GO:0045334;clathrin-coated endocytic vesicle;0.0162514891531528!GO:0030134;ER to Golgi transport vesicle;0.0168248844321024!GO:0030145;manganese ion binding;0.0170320999552068!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0173409258709157!GO:0035258;steroid hormone receptor binding;0.0173716060738773!GO:0006417;regulation of translation;0.0175951099917417!GO:0006740;NADPH regeneration;0.0180055571104747!GO:0006098;pentose-phosphate shunt;0.0180055571104747!GO:0022890;inorganic cation transmembrane transporter activity;0.0185370027352996!GO:0016197;endosome transport;0.0186695634427498!GO:0000209;protein polyubiquitination;0.018713682417977!GO:0043154;negative regulation of caspase activity;0.0189311247251319!GO:0000178;exosome (RNase complex);0.0189311247251319!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0189311247251319!GO:0045047;protein targeting to ER;0.0189311247251319!GO:0003678;DNA helicase activity;0.0189811493400312!GO:0004549;tRNA-specific ribonuclease activity;0.0197064052751555!GO:0005758;mitochondrial intermembrane space;0.0205681925641136!GO:0009112;nucleobase metabolic process;0.0207309364312655!GO:0050178;phenylpyruvate tautomerase activity;0.0207834008000032!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0210146085838927!GO:0006497;protein amino acid lipidation;0.0211083584064321!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0214682364683404!GO:0008299;isoprenoid biosynthetic process;0.0216154308216398!GO:0006509;membrane protein ectodomain proteolysis;0.0216154308216398!GO:0033619;membrane protein proteolysis;0.0216154308216398!GO:0005869;dynactin complex;0.0220131726656969!GO:0004532;exoribonuclease activity;0.0220715041412563!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0220715041412563!GO:0006519;amino acid and derivative metabolic process;0.022169685426557!GO:0016481;negative regulation of transcription;0.022169685426557!GO:0007021;tubulin folding;0.022169685426557!GO:0016408;C-acyltransferase activity;0.0223164338487258!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0226072700612425!GO:0010257;NADH dehydrogenase complex assembly;0.0226072700612425!GO:0033108;mitochondrial respiratory chain complex assembly;0.0226072700612425!GO:0006352;transcription initiation;0.0228234159317902!GO:0006643;membrane lipid metabolic process;0.0231274837886394!GO:0031272;regulation of pseudopodium formation;0.0231840257378849!GO:0031269;pseudopodium formation;0.0231840257378849!GO:0031344;regulation of cell projection organization and biogenesis;0.0231840257378849!GO:0031268;pseudopodium organization and biogenesis;0.0231840257378849!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0231840257378849!GO:0031274;positive regulation of pseudopodium formation;0.0231840257378849!GO:0048487;beta-tubulin binding;0.0232803875849479!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0235154086491582!GO:0030032;lamellipodium biogenesis;0.0239851194467839!GO:0051338;regulation of transferase activity;0.0244711101527934!GO:0008652;amino acid biosynthetic process;0.0246303023385588!GO:0042168;heme metabolic process;0.0248365822598071!GO:0009303;rRNA transcription;0.0249942096719538!GO:0044433;cytoplasmic vesicle part;0.0251223842817104!GO:0016791;phosphoric monoester hydrolase activity;0.0256428542320317!GO:0005732;small nucleolar ribonucleoprotein complex;0.0260904489711152!GO:0007050;cell cycle arrest;0.0263252167306894!GO:0008538;proteasome activator activity;0.0268850775465454!GO:0000776;kinetochore;0.0271894665661908!GO:0000030;mannosyltransferase activity;0.0272172469300679!GO:0030128;clathrin coat of endocytic vesicle;0.0273787940777148!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0273787940777148!GO:0030122;AP-2 adaptor complex;0.0273787940777148!GO:0005774;vacuolar membrane;0.0274724583584523!GO:0046519;sphingoid metabolic process;0.0280622675102359!GO:0006376;mRNA splice site selection;0.0284851203409805!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0284851203409805!GO:0004128;cytochrome-b5 reductase activity;0.0287113117574915!GO:0031124;mRNA 3'-end processing;0.0290712507024333!GO:0004674;protein serine/threonine kinase activity;0.0295606792734053!GO:0030127;COPII vesicle coat;0.0296091044072213!GO:0012507;ER to Golgi transport vesicle membrane;0.0296091044072213!GO:0043414;biopolymer methylation;0.0298122883125761!GO:0008203;cholesterol metabolic process;0.0300812969395209!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0306176295675303!GO:0030027;lamellipodium;0.0312076286485103!GO:0006144;purine base metabolic process;0.0315852804211438!GO:0006644;phospholipid metabolic process;0.0315852804211438!GO:0007346;regulation of progression through mitotic cell cycle;0.0318244703150136!GO:0030911;TPR domain binding;0.0319644458104812!GO:0030833;regulation of actin filament polymerization;0.0322503414412932!GO:0008408;3'-5' exonuclease activity;0.0323878968980568!GO:0031371;ubiquitin conjugating enzyme complex;0.0323878968980568!GO:0005862;muscle thin filament tropomyosin;0.0325312408515474!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0327783149290845!GO:0016584;nucleosome positioning;0.033164643813595!GO:0046365;monosaccharide catabolic process;0.0333710121434029!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0337830771872689!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0340088653607019!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0340202922882346!GO:0016653;oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor;0.0340741797074567!GO:0035035;histone acetyltransferase binding;0.0342187436462601!GO:0004526;ribonuclease P activity;0.0343253915808881!GO:0051272;positive regulation of cell motility;0.0348523821251268!GO:0040017;positive regulation of locomotion;0.0348523821251268!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0352557713287394!GO:0051128;regulation of cellular component organization and biogenesis;0.0352930474791302!GO:0006310;DNA recombination;0.0358208499023048!GO:0019318;hexose metabolic process;0.0358521962345665!GO:0042158;lipoprotein biosynthetic process;0.0361281271099128!GO:0006354;RNA elongation;0.0363011231339661!GO:0000339;RNA cap binding;0.0363223842773517!GO:0005996;monosaccharide metabolic process;0.0368879177254571!GO:0008426;protein kinase C inhibitor activity;0.0369759981288297!GO:0051716;cellular response to stimulus;0.0369902992041562!GO:0016860;intramolecular oxidoreductase activity;0.0371669860706465!GO:0030216;keratinocyte differentiation;0.0375201208595203!GO:0006275;regulation of DNA replication;0.0375465303026285!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0376338671640802!GO:0008213;protein amino acid alkylation;0.0376732632594018!GO:0006479;protein amino acid methylation;0.0376732632594018!GO:0035267;NuA4 histone acetyltransferase complex;0.0376732632594018!GO:0016407;acetyltransferase activity;0.0376969086815888!GO:0046426;negative regulation of JAK-STAT cascade;0.0378759446376881!GO:0016835;carbon-oxygen lyase activity;0.0380620759788183!GO:0043189;H4/H2A histone acetyltransferase complex;0.038356894808808!GO:0030521;androgen receptor signaling pathway;0.0387451626703985!GO:0006458;'de novo' protein folding;0.0392645365031697!GO:0051084;'de novo' posttranslational protein folding;0.0392645365031697!GO:0007034;vacuolar transport;0.0393049373599374!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0393891306826194!GO:0032259;methylation;0.0401100615353239!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0401100615353239!GO:0012510;trans-Golgi network transport vesicle membrane;0.0401100615353239!GO:0031625;ubiquitin protein ligase binding;0.0403389634600434!GO:0042770;DNA damage response, signal transduction;0.0403389634600434!GO:0009119;ribonucleoside metabolic process;0.0407802940378982!GO:0016417;S-acyltransferase activity;0.0407837600163285!GO:0006720;isoprenoid metabolic process;0.0410909809772993!GO:0043549;regulation of kinase activity;0.0421318779253535!GO:0008017;microtubule binding;0.04224618509176!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.042745482225539!GO:0008283;cell proliferation;0.0429810737121925!GO:0030503;regulation of cell redox homeostasis;0.0429810737121925!GO:0006629;lipid metabolic process;0.0430583623540769!GO:0051881;regulation of mitochondrial membrane potential;0.0430583623540769!GO:0031301;integral to organelle membrane;0.0431600642886179!GO:0031326;regulation of cellular biosynthetic process;0.0435824398487834!GO:0008243;plasminogen activator activity;0.0441430023764255!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0441430023764255!GO:0000792;heterochromatin;0.0441478319494905!GO:0030508;thiol-disulfide exchange intermediate activity;0.0441478319494905!GO:0006596;polyamine biosynthetic process;0.0443909664433291!GO:0006783;heme biosynthetic process;0.0450699217625029!GO:0004680;casein kinase activity;0.045357656056991!GO:0015036;disulfide oxidoreductase activity;0.0458934165601106!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0462626748499783!GO:0009124;nucleoside monophosphate biosynthetic process;0.0464942230585267!GO:0009123;nucleoside monophosphate metabolic process;0.0464942230585267!GO:0007040;lysosome organization and biogenesis;0.0468053818663057!GO:0009889;regulation of biosynthetic process;0.0472113209509743!GO:0046039;GTP metabolic process;0.0474297729036226!GO:0006183;GTP biosynthetic process;0.0474297729036226!GO:0000096;sulfur amino acid metabolic process;0.0477187317328674!GO:0009161;ribonucleoside monophosphate metabolic process;0.048556044584337!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.048556044584337!GO:0006308;DNA catabolic process;0.048556044584337!GO:0019320;hexose catabolic process;0.048556044584337!GO:0055092;sterol homeostasis;0.0486623913442947!GO:0042632;cholesterol homeostasis;0.0486623913442947!GO:0044437;vacuolar part;0.0486623913442947!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0487356248203833!GO:0004448;isocitrate dehydrogenase activity;0.0489393329219419!GO:0003682;chromatin binding;0.0499418548800281!GO:0012506;vesicle membrane;0.0499701868771499
|sample_id=11453
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=lung
|top_motifs=PPARG:2.51016496887;NR5A1,2:2.47466840946;TP53:2.38509655325;POU2F1..3:2.14712405396;VSX1,2:1.8612811267;TBX4,5:1.68703432619;ZEB1:1.68108265608;SNAI1..3:1.58990274903;NKX2-3_NKX2-5:1.39059873034;ZNF148:1.38111726694;MYOD1:1.19106403608;TBP:1.1775867697;HAND1,2:1.00462749178;IKZF1:0.993720045574;ZNF423:0.975010630055;PAX1,9:0.927019630365;HMX1:0.914078385619;ADNP_IRX_SIX_ZHX:0.900967425156;TFCP2:0.893037459499;XCPE1{core}:0.872466695288;TEAD1:0.785403303583;FOXQ1:0.746927068806;RBPJ:0.693877903939;NANOG:0.683201537444;ARID5B:0.677016004501;STAT5{A,B}:0.675606341898;LEF1_TCF7_TCF7L1,2:0.6592579442;ONECUT1,2:0.635637544563;FOS_FOS{B,L1}_JUN{B,D}:0.631662179641;GLI1..3:0.621382197122;TFAP2{A,C}:0.614757692348;NFIL3:0.613932660619;SP1:0.572612236277;POU3F1..4:0.562020334163;AR:0.559232865313;bHLH_family:0.543106132702;HIF1A:0.534965792076;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.528647494219;ELK1,4_GABP{A,B1}:0.512421752273;BACH2:0.498149792711;REST:0.491729555593;ESR1:0.47213941488;FOXL1:0.457433869968;SOX{8,9,10}:0.451043618235;GFI1:0.430380822944;GTF2A1,2:0.429402963252;EP300:0.422648107757;FOXM1:0.361044356922;TLX1..3_NFIC{dimer}:0.332545337637;LHX3,4:0.318872098934;ZNF143:0.315705946986;FOSL2:0.314080331261;PBX1:0.31085932552;TFAP4:0.29424627313;YY1:0.267812312113;ELF1,2,4:0.244378372586;NKX2-2,8:0.235233295017;E2F1..5:0.233647913985;ZBTB6:0.233594030336;HLF:0.226814168657;MTF1:0.224191632189;ZIC1..3:0.220955577968;EBF1:0.218390773528;GFI1B:0.201249749547;ZNF238:0.197242738401;PAX2:0.178723057953;RXR{A,B,G}:0.170318786875;OCT4_SOX2{dimer}:0.168921803864;SOX17:0.145777700439;NFE2:0.134474878863;NFY{A,B,C}:0.131742729269;LMO2:0.12591668868;HNF4A_NR2F1,2:0.102420843008;TLX2:0.0970228322883;HOX{A5,B5}:0.0951002586735;RXRA_VDR{dimer}:0.0839140556127;GCM1,2:0.0799251775054;GATA6:0.0459128565717;CEBPA,B_DDIT3:0.0440336743595;ESRRA:0.0409552585798;POU1F1:0.0282506404632;GZF1:0.00222988212501;POU6F1:-0.0188424265183;PAX8:-0.0469297401059;NKX3-2:-0.049177206616;FOX{F1,F2,J1}:-0.0540823741088;CRX:-0.0591766730292;NANOG{mouse}:-0.064545267152;NRF1:-0.0683891989532;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0689298612245;CDC5L:-0.0733284066209;POU5F1:-0.0772807401568;NFKB1_REL_RELA:-0.084099557285;HES1:-0.10790652777;MYB:-0.137645395837;HSF1,2:-0.177272967895;ETS1,2:-0.195252377689;TFDP1:-0.201790874687;SPZ1:-0.205151551377;HOXA9_MEIS1:-0.20570490752;T:-0.223042982925;JUN:-0.272292425475;FOX{I1,J2}:-0.275229258338;STAT2,4,6:-0.2837913822;PAX5:-0.295544247744;MAZ:-0.314912866688;HNF1A:-0.352104800195;SOX2:-0.382305863136;UFEwm:-0.386685553933;NR1H4:-0.406142484239;NR6A1:-0.428863387011;KLF4:-0.429061618767;CREB1:-0.437750879902;SPI1:-0.450200973408;TFAP2B:-0.451859658197;SPIB:-0.458968500365;HOX{A4,D4}:-0.475566559241;RFX1:-0.486706388303;SMAD1..7,9:-0.488336803149;RREB1:-0.50306517287;EN1,2:-0.510147739956;ATF5_CREB3:-0.549780232658;ZBTB16:-0.568451579998;NHLH1,2:-0.575551443509;AIRE:-0.576375538875;HIC1:-0.601373116362;HOX{A6,A7,B6,B7}:-0.612184671716;ATF4:-0.614126864757;NFE2L2:-0.62641585045;GTF2I:-0.63545220014;RUNX1..3:-0.642527418458;IRF7:-0.656855050163;PAX3,7:-0.661347626946;PDX1:-0.664038274295;MEF2{A,B,C,D}:-0.67099215698;MYBL2:-0.685022659275;NFE2L1:-0.698834871691;PAX6:-0.719345901066;FOXN1:-0.744296010175;PITX1..3:-0.754934256709;TEF:-0.76510416364;AHR_ARNT_ARNT2:-0.766532024606;FOXO1,3,4:-0.771977383076;RFX2..5_RFXANK_RFXAP:-0.776262734304;NR3C1:-0.779563897049;PRRX1,2:-0.782827858004;RORA:-0.794460263499;NFIX:-0.802554808129;ATF2:-0.813895640041;CUX2:-0.819167090548;ZFP161:-0.83549534737;SRF:-0.838257512255;MED-1{core}:-0.88416616126;MAFB:-0.886234685877;TGIF1:-0.936464227235;MYFfamily:-0.991004582093;ALX1:-1.03082119485;CDX1,2,4:-1.0319028677;FOXA2:-1.0377606119;TOPORS:-1.15845913641;BREu{core}:-1.16865021423;NFATC1..3:-1.16977727615;FOXP1:-1.17754061503;STAT1,3:-1.18387028385;DMAP1_NCOR{1,2}_SMARC:-1.20823548582;SOX5:-1.21420509183;ZNF384:-1.21838292342;TAL1_TCF{3,4,12}:-1.21986003243;ALX4:-1.22985502897;PATZ1:-1.26536824786;EVI1:-1.26858537575;IRF1,2:-1.28107376309;HMGA1,2:-1.28843058813;EGR1..3:-1.37176199256;PAX4:-1.41627897054;NKX3-1:-1.43880637504;GATA4:-1.44163583658;PRDM1:-1.45332593106;XBP1:-1.45860567874;NKX2-1,4:-1.46727105348;MZF1:-1.47194119149;SREBF1,2:-1.49241311685;MTE{core}:-1.51407934818;IKZF2:-1.51418060629;FOXP3:-1.52522123221;ATF6:-1.54311771788;FOX{D1,D2}:-1.55458003967;NKX6-1,2:-1.57021295066;DBP:-1.71033568299;HBP1_HMGB_SSRP1_UBTF:-1.74724130726;BPTF:-1.94121199602;FOXD3:-2.01668583146
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11453-119A4;search_select_hide=table117:FF:11453-119A4
}}
}}

Latest revision as of 18:02, 4 June 2020

Name:Bronchial Epithelial Cell, donor4
Species:Human (Homo sapiens)
Library ID:CNhs12054
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuelung
dev stage20 years old adult
sexmale
age20
cell typeepithelial cell of lung, bronchial
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1858
catalog numberCA502-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005472
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12054 CAGE DRX008122 DRR008994
Accession ID Hg19

Library idBAMCTSS
CNhs12054 DRZ000419 DRZ001804
Accession ID Hg38

Library idBAMCTSS
CNhs12054 DRZ011769 DRZ013154
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005472
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10008.GTGAAA sRNA-Seq DRX037124 DRR041490
Accession ID Hg19

Library idBAMCTSS
SRhi10008.GTGAAA DRZ007132


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.169
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.158
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.265
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.579
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.331
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.967
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.239
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal1.196
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus1.07
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.283
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.403
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12054

Jaspar motifP-value
MA0002.20.789
MA0003.10.328
MA0004.10.817
MA0006.10.303
MA0007.10.181
MA0009.10.0448
MA0014.10.46
MA0017.10.0183
MA0018.20.25
MA0019.10.221
MA0024.10.633
MA0025.10.409
MA0027.10.481
MA0028.10.0187
MA0029.10.248
MA0030.10.423
MA0031.10.0113
MA0035.20.111
MA0038.10.241
MA0039.20.00368
MA0040.10.286
MA0041.10.403
MA0042.10.871
MA0043.10.389
MA0046.10.528
MA0047.20.536
MA0048.10.617
MA0050.11.27383e-9
MA0051.17.93155e-4
MA0052.10.971
MA0055.10.0015
MA0057.10.0514
MA0058.10.627
MA0059.10.164
MA0060.10.0129
MA0061.10.592
MA0062.20.00456
MA0065.20.00257
MA0066.10.108
MA0067.10.139
MA0068.10.00388
MA0069.10.529
MA0070.10.886
MA0071.10.936
MA0072.10.912
MA0073.10.531
MA0074.10.934
MA0076.10.107
MA0077.10.577
MA0078.10.682
MA0079.20.712
MA0080.20.121
MA0081.10.597
MA0083.10.391
MA0084.10.0318
MA0087.10.348
MA0088.10.0763
MA0090.10.0251
MA0091.10.951
MA0092.10.451
MA0093.10.747
MA0099.23.98096e-13
MA0100.10.0646
MA0101.10.755
MA0102.20.0296
MA0103.12.13766e-6
MA0104.20.428
MA0105.10.514
MA0106.12.32738e-6
MA0107.10.937
MA0108.20.00513
MA0111.10.901
MA0112.20.0241
MA0113.10.737
MA0114.10.0187
MA0115.10.486
MA0116.10.0787
MA0117.10.957
MA0119.10.398
MA0122.10.89
MA0124.10.89
MA0125.10.218
MA0131.10.627
MA0135.10.0521
MA0136.10.458
MA0137.20.339
MA0138.20.169
MA0139.10.556
MA0140.10.273
MA0141.10.0945
MA0142.10.00695
MA0143.10.837
MA0144.10.98
MA0145.10.0639
MA0146.10.0464
MA0147.10.256
MA0148.10.394
MA0149.10.0332
MA0150.10.223
MA0152.10.225
MA0153.10.0697
MA0154.10.232
MA0155.10.607
MA0156.10.147
MA0157.10.144
MA0159.10.116
MA0160.10.089
MA0162.10.0717
MA0163.10.147
MA0164.10.62
MA0258.10.166
MA0259.10.431



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12054

Novel motifP-value
10.434
100.77
1000.183
1010.00547
1020.28
1030.219
1040.575
1050.163
1060.264
1070.344
1080.837
1091.58616e-4
110.0463
1100.0168
1110.594
1120.63
1130.528
1140.45
1150.333
1160.142
1170.175
1180.688
1190.212
120.303
1200.06
1210.38
1220.0166
1230.56
1240.566
1250.676
1260.437
1270.107
1280.983
1290.114
130.00426
1300.414
1310.253
1320.602
1330.0029
1340.191
1350.769
1360.0956
1370.378
1380.968
1390.718
140.941
1400.91
1410.966
1420.0592
1430.923
1440.123
1450.852
1460.0113
1470.141
1480.618
1490.949
150.635
1500.539
1510.518
1520.111
1530.597
1540.312
1550.402
1560.276
1570.731
1580.316
1590.795
160.153
1600.0854
1610.0894
1620.625
1630.481
1640.467
1650.647
1660.57
1670.719
1680.518
1690.0716
170.112
180.525
190.806
20.126
200.971
210.973
220.157
230.973
240.0398
250.623
260.0721
270.224
280.849
290.223
30.618
300.12
310.644
320.968
330.142
340.772
350.502
360.0794
370.248
380.132
390.604
40.593
400.00154
410.669
420.624
430.666
440.673
450.21
460.391
470.149
480.042
490.955
50.577
500.506
510.808
520.431
530.587
540.893
550.523
560.364
570.369
580.784
590.0539
60.231
600.228
610.489
620.899
630.279
640.166
650.326
660.206
670.965
680.911
690.337
70.203
700.0684
710.1
720.951
730.0402
740.041
750.206
760.719
770.0293
780.0594
790.467
80.141
800.729
810.965
820.774
830.993
840.732
850.899
860.919
870.00712
880.774
890.0607
90.642
900.00702
910.694
920.81
930.831
940.835
950.00644
960.654
970.712
980.205
990.0543



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12054


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002202 (epithelial cell of tracheobronchial tree)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002632 (epithelial cell of lower respiratory tract)
0002368 (respiratory epithelial cell)
0002328 (bronchial epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004802 (respiratory tract epithelium)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000485 (simple columnar epithelium)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0004815 (lower respiratory tract epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0000115 (lung epithelium)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0007196 (tracheobronchial tree)
0002031 (epithelium of bronchus)
0002185 (bronchus)
0000065 (respiratory tract)
0001558 (lower respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000015 (human bronchial epithelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)

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