FF:11861-125A7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005739 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008150;DRR009022;DRZ000447;DRZ001832;DRZ011797;DRZ013182 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000350,FF:0000629,FF:0011443 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000629,FF:0011443,FF:11861-125A7 | |fonse_treatment_closure=EFO:0000369,FF:0000629,FF:0011443,FF:11861-125A7 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520IFN%2520%252b%2520N-hexane%252c%2520donor1.CNhs13466.11861-125A7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520IFN%2520%252b%2520N-hexane%252c%2520donor1.CNhs13466.11861-125A7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520IFN%2520%252b%2520N-hexane%252c%2520donor1.CNhs13466.11861-125A7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520IFN%2520%252b%2520N-hexane%252c%2520donor1.CNhs13466.11861-125A7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520IFN%2520%252b%2520N-hexane%252c%2520donor1.CNhs13466.11861-125A7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11861-125A7 | |id=FF:11861-125A7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011443 | ||
|is_obsolete= | |||
|library_id=CNhs13466 | |||
|library_id_phase_based=2:CNhs13466 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11861 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11861 | |||
|name=CD14+ monocytes - treated with IFN + N-hexane, donor1 | |name=CD14+ monocytes - treated with IFN + N-hexane, donor1 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13466,LSID1024,release012,COMPLETED | |profile_hcage=CNhs13466,LSID1024,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=3.82545 | |rna_weight_ug=3.82545 | ||
|sample_age=69 | |sample_age=69 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.09784596600735e-270!GO:0005737;cytoplasm;1.45107574451757e-127!GO:0043227;membrane-bound organelle;1.57117985449157e-117!GO:0043231;intracellular membrane-bound organelle;3.41109013810949e-117!GO:0043226;organelle;1.01209617544691e-107!GO:0043229;intracellular organelle;6.90431521097777e-107!GO:0044444;cytoplasmic part;2.04709484392675e-84!GO:0044422;organelle part;8.82407232224622e-71!GO:0044446;intracellular organelle part;3.61745755032796e-69!GO:0005515;protein binding;5.92939836211893e-67!GO:0044237;cellular metabolic process;8.14133975745328e-66!GO:0044238;primary metabolic process;1.32834370769843e-64!GO:0043170;macromolecule metabolic process;5.1794715689309e-64!GO:0032991;macromolecular complex;1.04750910030863e-58!GO:0003723;RNA binding;9.27732046553189e-55!GO:0030529;ribonucleoprotein complex;1.00820909904386e-49!GO:0019538;protein metabolic process;1.02984757793163e-49!GO:0044428;nuclear part;3.05925087480406e-47!GO:0044267;cellular protein metabolic process;2.74604413876464e-46!GO:0005634;nucleus;3.10194855698067e-46!GO:0044260;cellular macromolecule metabolic process;4.64661718688511e-46!GO:0033036;macromolecule localization;6.10367972051869e-43!GO:0015031;protein transport;3.59115953851801e-42!GO:0045184;establishment of protein localization;4.40019103597741e-42!GO:0008104;protein localization;1.94971426723153e-40!GO:0043233;organelle lumen;5.04607728722388e-38!GO:0031974;membrane-enclosed lumen;5.04607728722388e-38!GO:0006412;translation;4.41478319513649e-37!GO:0005829;cytosol;4.67193925956011e-35!GO:0031090;organelle membrane;1.24436382910807e-34!GO:0043283;biopolymer metabolic process;3.04057651616605e-34!GO:0016071;mRNA metabolic process;1.03798744647841e-31!GO:0010467;gene expression;5.37132538690801e-31!GO:0006396;RNA processing;5.52079382700553e-31!GO:0043234;protein complex;4.90872982774665e-30!GO:0031981;nuclear lumen;3.44575748168206e-29!GO:0006915;apoptosis;1.14078347336177e-28!GO:0012501;programmed cell death;1.14078347336177e-28!GO:0009059;macromolecule biosynthetic process;2.94746527582642e-28!GO:0008380;RNA splicing;4.41114226903628e-28!GO:0005739;mitochondrion;5.23468764567617e-28!GO:0008219;cell death;5.74685459291342e-28!GO:0016265;death;5.74685459291342e-28!GO:0006397;mRNA processing;5.81793795326459e-28!GO:0046907;intracellular transport;1.07255814347508e-27!GO:0006886;intracellular protein transport;2.06994008817994e-27!GO:0016043;cellular component organization and biogenesis;3.15590882704023e-26!GO:0031967;organelle envelope;8.41760137046846e-26!GO:0031975;envelope;1.56065034346987e-25!GO:0009058;biosynthetic process;2.56596541833819e-25!GO:0005840;ribosome;4.09705125136903e-25!GO:0044249;cellular biosynthetic process;1.01844297635203e-24!GO:0003735;structural constituent of ribosome;4.26222563361454e-23!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.29407887251484e-22!GO:0033279;ribosomal subunit;2.48442949551338e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.54206808016289e-22!GO:0065003;macromolecular complex assembly;9.8033096549025e-22!GO:0005654;nucleoplasm;1.72796691299085e-21!GO:0051649;establishment of cellular localization;2.16964220771379e-21!GO:0005681;spliceosome;3.79540613398939e-21!GO:0051641;cellular localization;1.05781974731741e-20!GO:0044429;mitochondrial part;2.61700371577923e-20!GO:0044445;cytosolic part;2.71096818956877e-20!GO:0000166;nucleotide binding;6.58985734499388e-20!GO:0042981;regulation of apoptosis;6.95166602680356e-20!GO:0006512;ubiquitin cycle;1.00530658554132e-19!GO:0043067;regulation of programmed cell death;1.38188087662259e-19!GO:0008134;transcription factor binding;1.99709850530121e-19!GO:0043412;biopolymer modification;9.04850951502671e-19!GO:0044451;nucleoplasm part;3.2027496206805e-18!GO:0022607;cellular component assembly;4.16534728457848e-18!GO:0016192;vesicle-mediated transport;7.24565044304282e-18!GO:0044265;cellular macromolecule catabolic process;9.63540136654221e-18!GO:0006464;protein modification process;1.24347805374747e-17!GO:0006119;oxidative phosphorylation;2.00333496937072e-17!GO:0007243;protein kinase cascade;7.44632540970841e-17!GO:0043687;post-translational protein modification;7.56460958477268e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.3964744335985e-16!GO:0016462;pyrophosphatase activity;2.78780665507328e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;2.94910180748078e-16!GO:0005740;mitochondrial envelope;3.57644398079602e-16!GO:0019941;modification-dependent protein catabolic process;7.64995914330332e-16!GO:0043632;modification-dependent macromolecule catabolic process;7.64995914330332e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;9.3638473021309e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.09040307030789e-15!GO:0031966;mitochondrial membrane;1.23622615040452e-15!GO:0044257;cellular protein catabolic process;1.36680628231011e-15!GO:0048770;pigment granule;1.51766181335823e-15!GO:0042470;melanosome;1.51766181335823e-15!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.53686845422342e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.61145815717556e-15!GO:0017111;nucleoside-triphosphatase activity;1.64656104703403e-15!GO:0048523;negative regulation of cellular process;2.66464365144056e-15!GO:0005773;vacuole;6.12869180871723e-15!GO:0019866;organelle inner membrane;6.57834532518676e-15!GO:0022618;protein-RNA complex assembly;6.83478720092732e-15!GO:0032553;ribonucleotide binding;8.01687824107412e-15!GO:0032555;purine ribonucleotide binding;8.01687824107412e-15!GO:0002376;immune system process;1.37339011868229e-14!GO:0043285;biopolymer catabolic process;1.64251443790466e-14!GO:0017076;purine nucleotide binding;3.51986169457649e-14!GO:0005794;Golgi apparatus;3.89927770944019e-14!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.03313530330411e-14!GO:0006605;protein targeting;4.41604278326068e-14!GO:0007242;intracellular signaling cascade;4.55511506269925e-14!GO:0016604;nuclear body;6.7659756719262e-14!GO:0003676;nucleic acid binding;6.96692363466333e-14!GO:0012505;endomembrane system;7.87194025527081e-14!GO:0016874;ligase activity;1.04470235319876e-13!GO:0009057;macromolecule catabolic process;1.09495473977899e-13!GO:0006913;nucleocytoplasmic transport;1.2498160481028e-13!GO:0000323;lytic vacuole;1.71456082135844e-13!GO:0005764;lysosome;1.71456082135844e-13!GO:0016070;RNA metabolic process;1.94896232512311e-13!GO:0051169;nuclear transport;2.43041880543293e-13!GO:0048519;negative regulation of biological process;3.39636746925308e-13!GO:0000502;proteasome complex (sensu Eukaryota);4.54730489090304e-13!GO:0006793;phosphorus metabolic process;6.64489118890315e-13!GO:0006796;phosphate metabolic process;6.64489118890315e-13!GO:0044248;cellular catabolic process;7.23104155104885e-13!GO:0043069;negative regulation of programmed cell death;8.60297164405605e-13!GO:0043066;negative regulation of apoptosis;1.0383240230544e-12!GO:0044455;mitochondrial membrane part;1.15914157291448e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.65832316658298e-12!GO:0005743;mitochondrial inner membrane;2.14057519398858e-12!GO:0050794;regulation of cellular process;2.20447200568978e-12!GO:0030163;protein catabolic process;2.90706576741443e-12!GO:0005768;endosome;3.14010716273687e-12!GO:0006955;immune response;4.79886072650303e-12!GO:0015934;large ribosomal subunit;6.75676368455301e-12!GO:0016607;nuclear speck;6.92766455437594e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.51837039331112e-12!GO:0003712;transcription cofactor activity;9.06630299797117e-12!GO:0006996;organelle organization and biogenesis;1.18902499942648e-11!GO:0051246;regulation of protein metabolic process;1.20292039218971e-11!GO:0016310;phosphorylation;1.38581819039749e-11!GO:0009615;response to virus;2.02607620287463e-11!GO:0015935;small ribosomal subunit;2.38506961145196e-11!GO:0008135;translation factor activity, nucleic acid binding;2.5805106218032e-11!GO:0006950;response to stress;3.38366120418951e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.12022533908568e-11!GO:0006457;protein folding;4.98443799831513e-11!GO:0008639;small protein conjugating enzyme activity;6.49941495367093e-11!GO:0006916;anti-apoptosis;9.47663541154879e-11!GO:0065009;regulation of a molecular function;9.47892791822366e-11!GO:0019787;small conjugating protein ligase activity;1.01071613907608e-10!GO:0006366;transcription from RNA polymerase II promoter;1.21632106709955e-10!GO:0004842;ubiquitin-protein ligase activity;1.26645952679339e-10!GO:0003743;translation initiation factor activity;1.64628773489458e-10!GO:0005524;ATP binding;1.6585332870123e-10!GO:0048193;Golgi vesicle transport;1.99535053648409e-10!GO:0005746;mitochondrial respiratory chain;2.34528656438241e-10!GO:0051186;cofactor metabolic process;2.70451921148809e-10!GO:0032559;adenyl ribonucleotide binding;2.90289243839891e-10!GO:0006259;DNA metabolic process;5.46979700229236e-10!GO:0005635;nuclear envelope;5.48294859349421e-10!GO:0006413;translational initiation;6.46228355731286e-10!GO:0009967;positive regulation of signal transduction;8.1819319062588e-10!GO:0006446;regulation of translational initiation;9.6801391939567e-10!GO:0005783;endoplasmic reticulum;9.867097142979e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.14979656125012e-09!GO:0030554;adenyl nucleotide binding;1.26596627470903e-09!GO:0050136;NADH dehydrogenase (quinone) activity;1.48121500776271e-09!GO:0003954;NADH dehydrogenase activity;1.48121500776271e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.48121500776271e-09!GO:0050789;regulation of biological process;1.65854501698085e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.80051267295545e-09!GO:0000375;RNA splicing, via transesterification reactions;1.80051267295545e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.80051267295545e-09!GO:0016787;hydrolase activity;1.90055758156885e-09!GO:0016881;acid-amino acid ligase activity;2.10253973407728e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.35992990743289e-09!GO:0048522;positive regulation of cellular process;2.75779095357491e-09!GO:0006732;coenzyme metabolic process;4.90435968698506e-09!GO:0017038;protein import;5.27067886655629e-09!GO:0051170;nuclear import;5.50421092314647e-09!GO:0031324;negative regulation of cellular metabolic process;6.69280286273469e-09!GO:0015986;ATP synthesis coupled proton transport;8.98337740904717e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.98337740904717e-09!GO:0048518;positive regulation of biological process;9.52402865891736e-09!GO:0019829;cation-transporting ATPase activity;9.57702734201845e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.06185380998493e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.07574165355013e-08!GO:0006606;protein import into nucleus;1.15846697908722e-08!GO:0051082;unfolded protein binding;1.25465340035766e-08!GO:0043065;positive regulation of apoptosis;1.94229047731936e-08!GO:0043068;positive regulation of programmed cell death;2.82597782587439e-08!GO:0009056;catabolic process;2.8789195702886e-08!GO:0042775;organelle ATP synthesis coupled electron transport;2.96108960085528e-08!GO:0042773;ATP synthesis coupled electron transport;2.96108960085528e-08!GO:0016887;ATPase activity;3.125417575331e-08!GO:0006417;regulation of translation;3.31243187611731e-08!GO:0042623;ATPase activity, coupled;3.70146768628178e-08!GO:0044453;nuclear membrane part;4.01493057394622e-08!GO:0065007;biological regulation;4.18057925275233e-08!GO:0005770;late endosome;4.66291798233347e-08!GO:0030964;NADH dehydrogenase complex (quinone);4.7854144399162e-08!GO:0045271;respiratory chain complex I;4.7854144399162e-08!GO:0005747;mitochondrial respiratory chain complex I;4.7854144399162e-08!GO:0005730;nucleolus;5.53507628445047e-08!GO:0044432;endoplasmic reticulum part;6.89728764204531e-08!GO:0009607;response to biotic stimulus;7.43562485843195e-08!GO:0006754;ATP biosynthetic process;8.96515983616693e-08!GO:0006753;nucleoside phosphate metabolic process;8.96515983616693e-08!GO:0009150;purine ribonucleotide metabolic process;9.02575610588219e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.27101342646688e-08!GO:0009152;purine ribonucleotide biosynthetic process;9.51695449131541e-08!GO:0009259;ribonucleotide metabolic process;9.51695449131541e-08!GO:0031965;nuclear membrane;9.5625079040139e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.03973880834582e-07!GO:0016564;transcription repressor activity;1.04462365259695e-07!GO:0009892;negative regulation of metabolic process;1.19945228009871e-07!GO:0006163;purine nucleotide metabolic process;1.38334456860026e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.39572485519644e-07!GO:0003713;transcription coactivator activity;1.43933892197286e-07!GO:0006461;protein complex assembly;1.46710580903992e-07!GO:0050790;regulation of catalytic activity;1.46913607408188e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.5318244044285e-07!GO:0008047;enzyme activator activity;1.56306635631274e-07!GO:0006164;purine nucleotide biosynthetic process;1.60612224334968e-07!GO:0044440;endosomal part;1.80333292519806e-07!GO:0010008;endosome membrane;1.80333292519806e-07!GO:0008565;protein transporter activity;2.04093426802764e-07!GO:0016481;negative regulation of transcription;2.15866642645004e-07!GO:0003924;GTPase activity;2.3420586542937e-07!GO:0006917;induction of apoptosis;2.47025614924541e-07!GO:0009260;ribonucleotide biosynthetic process;2.47579943005909e-07!GO:0007264;small GTPase mediated signal transduction;2.47720297720494e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.60631766057309e-07!GO:0005525;GTP binding;2.81256711812427e-07!GO:0005774;vacuolar membrane;2.98325025539213e-07!GO:0051726;regulation of cell cycle;3.18257806527589e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.79354604640432e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.79354604640432e-07!GO:0012502;induction of programmed cell death;3.98431924269998e-07!GO:0046034;ATP metabolic process;4.23308222035229e-07!GO:0000074;regulation of progression through cell cycle;4.25958256978781e-07!GO:0032446;protein modification by small protein conjugation;5.27192435265115e-07!GO:0009142;nucleoside triphosphate biosynthetic process;6.00972616320745e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.00972616320745e-07!GO:0009055;electron carrier activity;6.71680789011022e-07!GO:0048468;cell development;7.40024765403517e-07!GO:0051188;cofactor biosynthetic process;7.43566814550012e-07!GO:0007049;cell cycle;7.54423013237645e-07!GO:0031326;regulation of cellular biosynthetic process;8.19784116886569e-07!GO:0005839;proteasome core complex (sensu Eukaryota);8.2711421254098e-07!GO:0019899;enzyme binding;8.2711421254098e-07!GO:0005793;ER-Golgi intermediate compartment;8.99070965134681e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.99070965134681e-07!GO:0009144;purine nucleoside triphosphate metabolic process;8.99070965134681e-07!GO:0016567;protein ubiquitination;9.64261867654316e-07!GO:0009889;regulation of biosynthetic process;1.0935870017566e-06!GO:0009966;regulation of signal transduction;1.18185657226547e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.30885904384546e-06!GO:0044437;vacuolar part;1.31127040951601e-06!GO:0019222;regulation of metabolic process;1.36604098616156e-06!GO:0005765;lysosomal membrane;1.77531822396207e-06!GO:0045786;negative regulation of progression through cell cycle;1.86123654385067e-06!GO:0005643;nuclear pore;2.15359570899904e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.60317749335239e-06!GO:0005789;endoplasmic reticulum membrane;2.71625336975187e-06!GO:0009108;coenzyme biosynthetic process;2.73644977618844e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.97499562074787e-06!GO:0004386;helicase activity;3.0502934246411e-06!GO:0009141;nucleoside triphosphate metabolic process;3.20204189547633e-06!GO:0016568;chromatin modification;3.26724760030861e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.45079489056224e-06!GO:0008026;ATP-dependent helicase activity;3.65464126418119e-06!GO:0043228;non-membrane-bound organelle;3.86457127815229e-06!GO:0043232;intracellular non-membrane-bound organelle;3.86457127815229e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;3.90994522245136e-06!GO:0050657;nucleic acid transport;3.90994522245136e-06!GO:0051236;establishment of RNA localization;3.90994522245136e-06!GO:0050658;RNA transport;3.90994522245136e-06!GO:0031980;mitochondrial lumen;4.05437726393828e-06!GO:0005759;mitochondrial matrix;4.05437726393828e-06!GO:0004298;threonine endopeptidase activity;5.13918697472358e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.51485514129959e-06!GO:0006403;RNA localization;5.80253323572241e-06!GO:0016044;membrane organization and biogenesis;5.83741535120409e-06!GO:0032561;guanyl ribonucleotide binding;5.92275775997115e-06!GO:0019001;guanyl nucleotide binding;5.92275775997115e-06!GO:0006752;group transfer coenzyme metabolic process;6.46302978171741e-06!GO:0006888;ER to Golgi vesicle-mediated transport;7.10393902251812e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.34400922555398e-06!GO:0006323;DNA packaging;7.41913487720013e-06!GO:0016563;transcription activator activity;8.7319451764015e-06!GO:0006974;response to DNA damage stimulus;9.48067377943637e-06!GO:0043566;structure-specific DNA binding;1.02776304817134e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.16316850576573e-05!GO:0015399;primary active transmembrane transporter activity;1.16316850576573e-05!GO:0031982;vesicle;1.43280706180677e-05!GO:0003697;single-stranded DNA binding;1.43280706180677e-05!GO:0046930;pore complex;1.91961660764343e-05!GO:0005769;early endosome;2.13053259384003e-05!GO:0030120;vesicle coat;2.4050809235502e-05!GO:0030662;coated vesicle membrane;2.4050809235502e-05!GO:0005096;GTPase activator activity;2.74212425570743e-05!GO:0048475;coated membrane;2.88793397291243e-05!GO:0030117;membrane coat;2.88793397291243e-05!GO:0031252;leading edge;4.2375594019678e-05!GO:0030695;GTPase regulator activity;4.44198343686663e-05!GO:0000151;ubiquitin ligase complex;4.7473141989447e-05!GO:0006954;inflammatory response;4.7882247428011e-05!GO:0009060;aerobic respiration;4.83940860313305e-05!GO:0051028;mRNA transport;4.90074441161669e-05!GO:0044431;Golgi apparatus part;4.93934873214813e-05!GO:0005057;receptor signaling protein activity;4.93934873214813e-05!GO:0051336;regulation of hydrolase activity;4.93934873214813e-05!GO:0016197;endosome transport;5.1551239060078e-05!GO:0003724;RNA helicase activity;6.1607089100669e-05!GO:0045259;proton-transporting ATP synthase complex;6.60261518625413e-05!GO:0003714;transcription corepressor activity;6.61962472642121e-05!GO:0004674;protein serine/threonine kinase activity;7.10981505211304e-05!GO:0005798;Golgi-associated vesicle;8.51210326504488e-05!GO:0008234;cysteine-type peptidase activity;8.97856265685352e-05!GO:0031410;cytoplasmic vesicle;9.04263742659056e-05!GO:0000245;spliceosome assembly;9.42484802711579e-05!GO:0045892;negative regulation of transcription, DNA-dependent;9.55638031261683e-05!GO:0043492;ATPase activity, coupled to movement of substances;9.60525195450186e-05!GO:0016740;transferase activity;9.75585365098854e-05!GO:0031902;late endosome membrane;9.75585365098854e-05!GO:0051168;nuclear export;0.000101740047335316!GO:0006613;cotranslational protein targeting to membrane;0.000102449397982763!GO:0051707;response to other organism;0.000110073216664253!GO:0032940;secretion by cell;0.000111474970468223!GO:0031323;regulation of cellular metabolic process;0.000120204556656828!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000121795453441087!GO:0001816;cytokine production;0.000139294566507856!GO:0006897;endocytosis;0.000139294566507856!GO:0010324;membrane invagination;0.000139294566507856!GO:0030532;small nuclear ribonucleoprotein complex;0.000153145019302722!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000156348953365458!GO:0046822;regulation of nucleocytoplasmic transport;0.000156434631333513!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000162224568828302!GO:0008632;apoptotic program;0.000164288439662676!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000165198153069385!GO:0006281;DNA repair;0.000180554178361701!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000183875644901636!GO:0051276;chromosome organization and biogenesis;0.000183875644901636!GO:0005083;small GTPase regulator activity;0.000209002877937941!GO:0065002;intracellular protein transport across a membrane;0.000214494698856547!GO:0031988;membrane-bound vesicle;0.000242461561487786!GO:0005885;Arp2/3 protein complex;0.000245606920120586!GO:0051427;hormone receptor binding;0.000272740222182395!GO:0022402;cell cycle process;0.000297512104269028!GO:0006401;RNA catabolic process;0.000299093885435637!GO:0030099;myeloid cell differentiation;0.00030874173281707!GO:0022890;inorganic cation transmembrane transporter activity;0.000311270918391925!GO:0008654;phospholipid biosynthetic process;0.000330171278546929!GO:0007259;JAK-STAT cascade;0.000346183274982013!GO:0006818;hydrogen transport;0.000352369177544788!GO:0007265;Ras protein signal transduction;0.000358581910573884!GO:0045333;cellular respiration;0.000377397597113609!GO:0043623;cellular protein complex assembly;0.000431373196954093!GO:0035257;nuclear hormone receptor binding;0.000453270786858532!GO:0003729;mRNA binding;0.000474993955148283!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000476411799027349!GO:0015992;proton transport;0.000537603057806322!GO:0005761;mitochondrial ribosome;0.00053988305173906!GO:0000313;organellar ribosome;0.00053988305173906!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000553565037918957!GO:0030097;hemopoiesis;0.000598659501536049!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000633291517045549!GO:0006952;defense response;0.000633291517045549!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000700362387361714!GO:0016023;cytoplasmic membrane-bound vesicle;0.00071280412553146!GO:0005637;nuclear inner membrane;0.000720328100270968!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000727102587359452!GO:0008186;RNA-dependent ATPase activity;0.000736014483540188!GO:0051223;regulation of protein transport;0.000736653641540153!GO:0009893;positive regulation of metabolic process;0.000918346204025903!GO:0046519;sphingoid metabolic process;0.000919672826906265!GO:0006612;protein targeting to membrane;0.000929726684631582!GO:0005099;Ras GTPase activator activity;0.000961071702878348!GO:0046983;protein dimerization activity;0.000990636530106973!GO:0010468;regulation of gene expression;0.00103719169886113!GO:0016301;kinase activity;0.00103729535371467!GO:0005667;transcription factor complex;0.00105248367863705!GO:0007040;lysosome organization and biogenesis;0.00105520993454918!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00106023615113639!GO:0007034;vacuolar transport;0.00107617229636915!GO:0007050;cell cycle arrest;0.001128066451811!GO:0000139;Golgi membrane;0.00119543685692938!GO:0051090;regulation of transcription factor activity;0.0012038030716151!GO:0051789;response to protein stimulus;0.00123110591879739!GO:0006986;response to unfolded protein;0.00123110591879739!GO:0002757;immune response-activating signal transduction;0.00126139759612816!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0012742671673279!GO:0009719;response to endogenous stimulus;0.00127737417585946!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00133640903398664!GO:0006099;tricarboxylic acid cycle;0.00134261134815743!GO:0046356;acetyl-CoA catabolic process;0.00134261134815743!GO:0007005;mitochondrion organization and biogenesis;0.00135236072157827!GO:0043087;regulation of GTPase activity;0.00138892905989429!GO:0030036;actin cytoskeleton organization and biogenesis;0.00143191720952322!GO:0033157;regulation of intracellular protein transport;0.00147542782381314!GO:0042306;regulation of protein import into nucleus;0.00147542782381314!GO:0006672;ceramide metabolic process;0.00150954166492477!GO:0006402;mRNA catabolic process;0.00164208207369526!GO:0005741;mitochondrial outer membrane;0.00169715364235944!GO:0007041;lysosomal transport;0.00171558696024835!GO:0006468;protein amino acid phosphorylation;0.00174006409958665!GO:0001726;ruffle;0.00177916864235417!GO:0051187;cofactor catabolic process;0.00190634560925032!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00195639301893344!GO:0045321;leukocyte activation;0.0019834858148935!GO:0004004;ATP-dependent RNA helicase activity;0.00200370453165082!GO:0006643;membrane lipid metabolic process;0.00201405568452915!GO:0018193;peptidyl-amino acid modification;0.00236042655512493!GO:0044262;cellular carbohydrate metabolic process;0.00245858954579369!GO:0045045;secretory pathway;0.00251905108886849!GO:0042254;ribosome biogenesis and assembly;0.00260404568325478!GO:0002274;myeloid leukocyte activation;0.00264368198288473!GO:0002764;immune response-regulating signal transduction;0.00266963089020037!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00268329138583043!GO:0007033;vacuole organization and biogenesis;0.00269631015078533!GO:0004197;cysteine-type endopeptidase activity;0.00276758342321456!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0028238572318025!GO:0043281;regulation of caspase activity;0.00282644031558844!GO:0006607;NLS-bearing substrate import into nucleus;0.00283031327121478!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00286483718993351!GO:0033116;ER-Golgi intermediate compartment membrane;0.00287620492378786!GO:0022415;viral reproductive process;0.0028948651957692!GO:0006891;intra-Golgi vesicle-mediated transport;0.00301776464469655!GO:0005813;centrosome;0.0031214267509042!GO:0051338;regulation of transferase activity;0.00313460603759554!GO:0045454;cell redox homeostasis;0.00326340748378901!GO:0006084;acetyl-CoA metabolic process;0.00326340748378901!GO:0043085;positive regulation of catalytic activity;0.00348869406867567!GO:0065004;protein-DNA complex assembly;0.00349832733941426!GO:0009117;nucleotide metabolic process;0.00355705497016051!GO:0006091;generation of precursor metabolites and energy;0.00361022694471092!GO:0009611;response to wounding;0.00361022694471092!GO:0045637;regulation of myeloid cell differentiation;0.00379994501201114!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00389338670303773!GO:0042990;regulation of transcription factor import into nucleus;0.0040055473026933!GO:0042991;transcription factor import into nucleus;0.0040055473026933!GO:0003690;double-stranded DNA binding;0.00426711594339506!GO:0006919;caspase activation;0.00433984657895842!GO:0016779;nucleotidyltransferase activity;0.0043406853997628!GO:0043280;positive regulation of caspase activity;0.00434156839682905!GO:0009109;coenzyme catabolic process;0.00441225951553276!GO:0060090;molecular adaptor activity;0.00465574850887521!GO:0043549;regulation of kinase activity;0.00486624997990755!GO:0003725;double-stranded RNA binding;0.00486926181012718!GO:0030149;sphingolipid catabolic process;0.00487923100662272!GO:0006350;transcription;0.00489672096512797!GO:0008383;manganese superoxide dismutase activity;0.00520504965148807!GO:0001315;age-dependent response to reactive oxygen species;0.00520504965148807!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00521667978593757!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00521667978593757!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00521667978593757!GO:0046966;thyroid hormone receptor binding;0.00522393549346613!GO:0045893;positive regulation of transcription, DNA-dependent;0.00524956704413576!GO:0002252;immune effector process;0.00527410202035673!GO:0030041;actin filament polymerization;0.00541625504078518!GO:0031968;organelle outer membrane;0.00544409668456587!GO:0004185;serine carboxypeptidase activity;0.00561205782055722!GO:0019867;outer membrane;0.00574491494035183!GO:0016251;general RNA polymerase II transcription factor activity;0.00578381406070432!GO:0045941;positive regulation of transcription;0.00580006219000269!GO:0030867;rough endoplasmic reticulum membrane;0.00584329593161375!GO:0031625;ubiquitin protein ligase binding;0.00592525842402273!GO:0031901;early endosome membrane;0.00594434373736356!GO:0043021;ribonucleoprotein binding;0.00595259818945981!GO:0002520;immune system development;0.00598661070528757!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00605477020589877!GO:0004812;aminoacyl-tRNA ligase activity;0.00605477020589877!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00605477020589877!GO:0006458;'de novo' protein folding;0.00617593490741559!GO:0051084;'de novo' posttranslational protein folding;0.00617593490741559!GO:0051092;activation of NF-kappaB transcription factor;0.0063418040532307!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00635798571521446!GO:0045859;regulation of protein kinase activity;0.00639222706284347!GO:0031325;positive regulation of cellular metabolic process;0.0064030298288965!GO:0048487;beta-tubulin binding;0.00641777381031438!GO:0031072;heat shock protein binding;0.00693187580157303!GO:0042110;T cell activation;0.00708281854396613!GO:0000287;magnesium ion binding;0.00710995492260041!GO:0032318;regulation of Ras GTPase activity;0.0072965293435364!GO:0030658;transport vesicle membrane;0.00737550019350789!GO:0016363;nuclear matrix;0.00796713068753502!GO:0030134;ER to Golgi transport vesicle;0.00802533378804524!GO:0005815;microtubule organizing center;0.00802533378804524!GO:0006352;transcription initiation;0.00859605817631024!GO:0019883;antigen processing and presentation of endogenous antigen;0.00881778177370742!GO:0048534;hemopoietic or lymphoid organ development;0.00889187777795261!GO:0001817;regulation of cytokine production;0.00912497346866319!GO:0002521;leukocyte differentiation;0.00917692236520883!GO:0019904;protein domain specific binding;0.0094049451893117!GO:0030029;actin filament-based process;0.00947489776867482!GO:0030127;COPII vesicle coat;0.00947489776867482!GO:0012507;ER to Golgi transport vesicle membrane;0.00947489776867482!GO:0043038;amino acid activation;0.00967607969259092!GO:0006418;tRNA aminoacylation for protein translation;0.00967607969259092!GO:0043039;tRNA aminoacylation;0.00967607969259092!GO:0030133;transport vesicle;0.00982975192381214!GO:0051252;regulation of RNA metabolic process;0.00991129072802917!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00999428669397177!GO:0019377;glycolipid catabolic process;0.0100145507334546!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0103083182849745!GO:0006399;tRNA metabolic process;0.0110515840552307!GO:0030693;caspase activity;0.0112036820357929!GO:0006650;glycerophospholipid metabolic process;0.0117749423785298!GO:0033367;protein localization in mast cell secretory granule;0.011878028457214!GO:0033365;protein localization in organelle;0.011878028457214!GO:0033371;T cell secretory granule organization and biogenesis;0.011878028457214!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.011878028457214!GO:0033375;protease localization in T cell secretory granule;0.011878028457214!GO:0042629;mast cell granule;0.011878028457214!GO:0033377;maintenance of protein localization in T cell secretory granule;0.011878028457214!GO:0033364;mast cell secretory granule organization and biogenesis;0.011878028457214!GO:0033380;granzyme B localization in T cell secretory granule;0.011878028457214!GO:0033379;maintenance of protease localization in T cell secretory granule;0.011878028457214!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.011878028457214!GO:0033368;protease localization in mast cell secretory granule;0.011878028457214!GO:0033366;protein localization in secretory granule;0.011878028457214!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.011878028457214!GO:0033374;protein localization in T cell secretory granule;0.011878028457214!GO:0008637;apoptotic mitochondrial changes;0.0119080402253926!GO:0002467;germinal center formation;0.0119902703173054!GO:0032386;regulation of intracellular transport;0.0120007775576024!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0120637787215539!GO:0048500;signal recognition particle;0.012300093611572!GO:0002440;production of molecular mediator of immune response;0.0124112691624407!GO:0048002;antigen processing and presentation of peptide antigen;0.0125597700328005!GO:0006333;chromatin assembly or disassembly;0.0127770322094528!GO:0009165;nucleotide biosynthetic process;0.0132927406490242!GO:0000209;protein polyubiquitination;0.0135209180587731!GO:0030384;phosphoinositide metabolic process;0.0140506121354187!GO:0015631;tubulin binding;0.0141887928571801!GO:0030518;steroid hormone receptor signaling pathway;0.0141887928571801!GO:0032763;regulation of mast cell cytokine production;0.0141887928571801!GO:0032762;mast cell cytokine production;0.0141887928571801!GO:0046467;membrane lipid biosynthetic process;0.0145964027958335!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0149138252733601!GO:0006611;protein export from nucleus;0.015378088582876!GO:0004177;aminopeptidase activity;0.0153937492112715!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0154566701423511!GO:0005484;SNAP receptor activity;0.0154566701423511!GO:0005788;endoplasmic reticulum lumen;0.0155126026023957!GO:0051345;positive regulation of hydrolase activity;0.0158445630956655!GO:0030224;monocyte differentiation;0.0162437465424934!GO:0030660;Golgi-associated vesicle membrane;0.0163612311807368!GO:0043433;negative regulation of transcription factor activity;0.0165637699602895!GO:0019318;hexose metabolic process;0.0171096702685277!GO:0008139;nuclear localization sequence binding;0.0171906937693219!GO:0051091;positive regulation of transcription factor activity;0.0173055552012559!GO:0001775;cell activation;0.0176564205424024!GO:0006414;translational elongation;0.0177670712961007!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0178175953406798!GO:0046979;TAP2 binding;0.0178258177109024!GO:0046977;TAP binding;0.0178258177109024!GO:0046978;TAP1 binding;0.0178258177109024!GO:0042802;identical protein binding;0.0180647841730179!GO:0051085;chaperone cofactor-dependent protein folding;0.0187824044646484!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0188614806398247!GO:0015923;mannosidase activity;0.0189578335823622!GO:0030176;integral to endoplasmic reticulum membrane;0.0191804493486535!GO:0030027;lamellipodium;0.0195582101166558!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0196400818766828!GO:0002819;regulation of adaptive immune response;0.0196400818766828!GO:0002250;adaptive immune response;0.0196400818766828!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0196400818766828!GO:0003702;RNA polymerase II transcription factor activity;0.0197932875480466!GO:0002224;toll-like receptor signaling pathway;0.0204657483139106!GO:0002221;pattern recognition receptor signaling pathway;0.0204657483139106!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.020686874832583!GO:0045047;protein targeting to ER;0.020686874832583!GO:0000785;chromatin;0.0209183324657156!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0209305694206726!GO:0008624;induction of apoptosis by extracellular signals;0.0213303656705152!GO:0006749;glutathione metabolic process;0.0213303656705152!GO:0017091;AU-rich element binding;0.0213726793395889!GO:0050779;RNA destabilization;0.0213726793395889!GO:0000289;poly(A) tail shortening;0.0213726793395889!GO:0050811;GABA receptor binding;0.0217831773753032!GO:0046649;lymphocyte activation;0.0218168932312482!GO:0019882;antigen processing and presentation;0.0218972282938197!GO:0030663;COPI coated vesicle membrane;0.0219077005984108!GO:0030126;COPI vesicle coat;0.0219077005984108!GO:0008629;induction of apoptosis by intracellular signals;0.0219959723677266!GO:0006405;RNA export from nucleus;0.0220768822552157!GO:0005996;monosaccharide metabolic process;0.0223207269891803!GO:0008656;caspase activator activity;0.0228082978728173!GO:0003727;single-stranded RNA binding;0.0232038851165781!GO:0050851;antigen receptor-mediated signaling pathway;0.0233709965401024!GO:0048471;perinuclear region of cytoplasm;0.0235042773266987!GO:0030137;COPI-coated vesicle;0.0235677243106077!GO:0005070;SH3/SH2 adaptor activity;0.0238244996591971!GO:0006644;phospholipid metabolic process;0.0238244996591971!GO:0051059;NF-kappaB binding;0.0239717039891446!GO:0006516;glycoprotein catabolic process;0.0242618013422992!GO:0019783;small conjugating protein-specific protease activity;0.0242618013422992!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0246802884500039!GO:0016791;phosphoric monoester hydrolase activity;0.0247819998959542!GO:0051247;positive regulation of protein metabolic process;0.0247819998959542!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0253149782134548!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0253149782134548!GO:0006364;rRNA processing;0.0258578324409174!GO:0005684;U2-dependent spliceosome;0.0258739740661351!GO:0006509;membrane protein ectodomain proteolysis;0.0258854555369919!GO:0033619;membrane protein proteolysis;0.0258854555369919!GO:0016072;rRNA metabolic process;0.0261162506677063!GO:0001819;positive regulation of cytokine production;0.0261162506677063!GO:0005048;signal sequence binding;0.0262739545747547!GO:0051098;regulation of binding;0.0265350801805501!GO:0050900;leukocyte migration;0.0266552204146812!GO:0045113;regulation of integrin biosynthetic process;0.026739454654526!GO:0045112;integrin biosynthetic process;0.026739454654526!GO:0046479;glycosphingolipid catabolic process;0.0269060267973095!GO:0043621;protein self-association;0.0269700161868984!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0270846598022188!GO:0046466;membrane lipid catabolic process;0.0271346240736604!GO:0016491;oxidoreductase activity;0.0273332476350314!GO:0042613;MHC class II protein complex;0.0273488570982584!GO:0030118;clathrin coat;0.0275476818503711!GO:0043488;regulation of mRNA stability;0.0275476818503711!GO:0043487;regulation of RNA stability;0.0275476818503711!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0281335869192502!GO:0005669;transcription factor TFIID complex;0.0287392036454866!GO:0046426;negative regulation of JAK-STAT cascade;0.0289027978465597!GO:0004843;ubiquitin-specific protease activity;0.0292387630312422!GO:0043300;regulation of leukocyte degranulation;0.0292387630312422!GO:0017166;vinculin binding;0.0295922738729821!GO:0005905;coated pit;0.0295922738729821!GO:0002443;leukocyte mediated immunity;0.0308901789242262!GO:0042108;positive regulation of cytokine biosynthetic process;0.0310854765499984!GO:0005791;rough endoplasmic reticulum;0.0315030858385578!GO:0051235;maintenance of localization;0.0323090202580681!GO:0033033;negative regulation of myeloid cell apoptosis;0.0325200447252263!GO:0001803;regulation of type III hypersensitivity;0.0325200447252263!GO:0032733;positive regulation of interleukin-10 production;0.0325200447252263!GO:0033025;regulation of mast cell apoptosis;0.0325200447252263!GO:0001805;positive regulation of type III hypersensitivity;0.0325200447252263!GO:0033023;mast cell homeostasis;0.0325200447252263!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0325200447252263!GO:0033032;regulation of myeloid cell apoptosis;0.0325200447252263!GO:0001802;type III hypersensitivity;0.0325200447252263!GO:0033028;myeloid cell apoptosis;0.0325200447252263!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0325200447252263!GO:0033026;negative regulation of mast cell apoptosis;0.0325200447252263!GO:0033024;mast cell apoptosis;0.0325200447252263!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0325793584232694!GO:0006007;glucose catabolic process;0.0326068186770467!GO:0051101;regulation of DNA binding;0.0326790479687281!GO:0032760;positive regulation of tumor necrosis factor production;0.0326790479687281!GO:0002682;regulation of immune system process;0.032935550290094!GO:0030218;erythrocyte differentiation;0.0333916884728418!GO:0030521;androgen receptor signaling pathway;0.0333916884728418!GO:0030258;lipid modification;0.0337320534477208!GO:0002684;positive regulation of immune system process;0.0337342073973762!GO:0046578;regulation of Ras protein signal transduction;0.0341373539572788!GO:0005869;dynactin complex;0.0349678686720279!GO:0045792;negative regulation of cell size;0.0349975552010078!GO:0043022;ribosome binding;0.0351767634595652!GO:0005694;chromosome;0.0355199953911971!GO:0035035;histone acetyltransferase binding;0.0361107878564404!GO:0006665;sphingolipid metabolic process;0.036691678906527!GO:0006260;DNA replication;0.0378299958568097!GO:0003711;transcription elongation regulator activity;0.0378677297357302!GO:0008312;7S RNA binding;0.0380068570363684!GO:0002253;activation of immune response;0.0380649220101243!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0380871532757976!GO:0002444;myeloid leukocyte mediated immunity;0.0381878010743586!GO:0000118;histone deacetylase complex;0.0387828296727515!GO:0002237;response to molecule of bacterial origin;0.0392655704580562!GO:0046483;heterocycle metabolic process;0.0392655704580562!GO:0015036;disulfide oxidoreductase activity;0.0396318950270704!GO:0019079;viral genome replication;0.0396870433519375!GO:0006376;mRNA splice site selection;0.0397221742996091!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0397221742996091!GO:0004672;protein kinase activity;0.0404478556214366!GO:0006914;autophagy;0.041585234856173!GO:0030308;negative regulation of cell growth;0.0419816929503778!GO:0042348;NF-kappaB import into nucleus;0.0427955737249232!GO:0042345;regulation of NF-kappaB import into nucleus;0.0427955737249232!GO:0004218;cathepsin S activity;0.0430592266574535!GO:0005975;carbohydrate metabolic process;0.043076875039112!GO:0016311;dephosphorylation;0.0434569276542437!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0437287508876425!GO:0015002;heme-copper terminal oxidase activity;0.0437287508876425!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0437287508876425!GO:0004129;cytochrome-c oxidase activity;0.0437287508876425!GO:0030833;regulation of actin filament polymerization;0.0439609225560452!GO:0008538;proteasome activator activity;0.0445755361825289!GO:0008154;actin polymerization and/or depolymerization;0.0445755361825289!GO:0030217;T cell differentiation;0.0447110027807371!GO:0030433;ER-associated protein catabolic process;0.0447110027807371!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0447110027807371!GO:0045309;protein phosphorylated amino acid binding;0.0448785754233038!GO:0047485;protein N-terminus binding;0.0450708711054396!GO:0016605;PML body;0.0453558421111296!GO:0006354;RNA elongation;0.0457742616064689!GO:0007162;negative regulation of cell adhesion;0.0458010325429303!GO:0008287;protein serine/threonine phosphatase complex;0.0458010325429303!GO:0005100;Rho GTPase activator activity;0.0458010325429303!GO:0042116;macrophage activation;0.0459405616601496!GO:0050778;positive regulation of immune response;0.0462701153315289!GO:0000339;RNA cap binding;0.0472984431388783!GO:0046474;glycerophospholipid biosynthetic process;0.0485025025736022!GO:0002718;regulation of cytokine production during immune response;0.0486405829052784!GO:0002367;cytokine production during immune response;0.0486405829052784!GO:0002700;regulation of production of molecular mediator of immune response;0.0486405829052784!GO:0051540;metal cluster binding;0.0487436681710105!GO:0051536;iron-sulfur cluster binding;0.0487436681710105!GO:0030503;regulation of cell redox homeostasis;0.0487436681710105!GO:0006740;NADPH regeneration;0.0487436681710105!GO:0006098;pentose-phosphate shunt;0.0487436681710105!GO:0051920;peroxiredoxin activity;0.0491906785613801!GO:0000119;mediator complex;0.0495587023766007!GO:0006261;DNA-dependent DNA replication;0.0498474225612002 | |||
|sample_id=11861 | |sample_id=11861 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=STAT2,4,6:4.70537868478;STAT1,3:4.19777384016;IRF7:4.09485794335;IRF1,2:3.78873340626;STAT5{A,B}:3.17986788248;NFE2L2:2.81632113569;CEBPA,B_DDIT3:2.61671126687;SPI1:2.51429316509;EP300:2.45712261662;SPIB:2.4344380225;NANOG{mouse}:2.4275918856;SREBF1,2:2.22689717353;NFE2:2.08185698893;PAX2:1.99896406771;TLX2:1.99083012476;FOXN1:1.93154158343;DMAP1_NCOR{1,2}_SMARC:1.90478852849;ETS1,2:1.90381330735;FOSL2:1.82721868797;NR1H4:1.73415267894;NFIL3:1.70295662128;PDX1:1.61016689175;BACH2:1.60218812631;NR6A1:1.52158559062;HLF:1.4874045667;FOS_FOS{B,L1}_JUN{B,D}:1.48134809766;FOXP3:1.41473686674;ELF1,2,4:1.37862088814;NFE2L1:1.36759450907;RXRA_VDR{dimer}:1.26606474117;RUNX1..3:1.20463389224;ATF5_CREB3:1.1934738105;ATF6:1.11993997538;TFCP2:1.0865884932;NFKB1_REL_RELA:1.07091507462;TGIF1:1.00653876645;ESRRA:0.973942640884;SPZ1:0.916869485405;FOXD3:0.851763830691;CDX1,2,4:0.799616746575;HBP1_HMGB_SSRP1_UBTF:0.792167872327;ATF4:0.78533015004;CREB1:0.760939076168;HMX1:0.734820806904;NKX3-2:0.660311070662;ALX4:0.651298177497;MAFB:0.576201876006;FOX{D1,D2}:0.452751769441;BPTF:0.451037930638;GLI1..3:0.444311292931;HIF1A:0.441419874746;ATF2:0.423729595058;HMGA1,2:0.379413274207;PAX3,7:0.366419361835;SMAD1..7,9:0.316430169265;PITX1..3:0.307559809526;FOX{F1,F2,J1}:0.22540526089;HSF1,2:0.224913154877;ESR1:0.198069947352;ZBTB16:0.19143569643;GATA4:0.189040181499;JUN:0.169319342044;MYB:0.153029437554;IKZF2:0.122868720316;PRDM1:0.0682335548746;NKX2-2,8:0.0466795207044;AHR_ARNT_ARNT2:0.0399329991483;FOXO1,3,4:0.0102481316093;TFAP4:-0.00927754575234;EN1,2:-0.0258440272738;XBP1:-0.0357990223858;RFX2..5_RFXANK_RFXAP:-0.079496591919;SRF:-0.0931907627491;MYFfamily:-0.135366708958;RXR{A,B,G}:-0.137808737499;NFIX:-0.163640959628;DBP:-0.200071206457;HOX{A6,A7,B6,B7}:-0.218049004918;NFATC1..3:-0.27205286285;PAX1,9:-0.296792897761;HNF4A_NR2F1,2:-0.298794090223;MZF1:-0.306755860215;NANOG:-0.330577302004;ZNF148:-0.381197626214;HES1:-0.392048672958;FOXM1:-0.438679382977;PAX4:-0.445239520235;TAL1_TCF{3,4,12}:-0.445751603225;PATZ1:-0.453484371917;POU6F1:-0.45999065526;TBP:-0.474444212315;VSX1,2:-0.488153116448;ZNF238:-0.525310840083;REST:-0.540311302631;FOXP1:-0.56028243324;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.568092050937;GATA6:-0.56861029246;POU1F1:-0.577777946343;IKZF1:-0.582627995881;NHLH1,2:-0.584711373258;CUX2:-0.59232384782;TOPORS:-0.594050974539;CRX:-0.601290196973;PAX8:-0.605580766954;MED-1{core}:-0.609005787913;ALX1:-0.61228488441;NKX6-1,2:-0.61932717213;HNF1A:-0.625752733134;MYOD1:-0.633565337413;OCT4_SOX2{dimer}:-0.64312698855;POU2F1..3:-0.657532231334;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.678864346092;PRRX1,2:-0.700957921399;TFAP2{A,C}:-0.705400978065;GCM1,2:-0.720302198655;POU5F1:-0.724418993284;ZBTB6:-0.749250312702;FOXA2:-0.777020794745;FOXL1:-0.801375097656;PPARG:-0.81776638652;EGR1..3:-0.829123415155;EBF1:-0.838728571941;MTF1:-0.839077997137;HAND1,2:-0.851108389561;RREB1:-0.858327275288;HOXA9_MEIS1:-0.873822929955;SOX2:-0.928036477377;MEF2{A,B,C,D}:-0.95228085241;NR3C1:-0.963677548861;EVI1:-0.96539257079;KLF4:-0.998306959656;UFEwm:-1.00209042298;MTE{core}:-1.01774206735;SOX5:-1.01966972185;HOX{A5,B5}:-1.02501963438;TFAP2B:-1.03349264386;ZEB1:-1.03858488105;ZFP161:-1.06484240051;PAX6:-1.08268839482;LMO2:-1.10585933826;MAZ:-1.10604300365;NKX3-1:-1.11755502671;AIRE:-1.11872968741;GTF2I:-1.16521155758;GZF1:-1.16997494583;ZIC1..3:-1.17070925061;SP1:-1.18849453813;TP53:-1.2041366521;FOXQ1:-1.22151900961;TLX1..3_NFIC{dimer}:-1.23368750399;AR:-1.24237562412;SNAI1..3:-1.24327829034;GTF2A1,2:-1.28202079561;XCPE1{core}:-1.29271983034;ADNP_IRX_SIX_ZHX:-1.35097000085;RFX1:-1.35524699211;TEF:-1.38490265055;ZNF423:-1.41836564524;E2F1..5:-1.43464291791;RORA:-1.44774781577;POU3F1..4:-1.45671914342;RBPJ:-1.46807525209;TEAD1:-1.47390811823;YY1:-1.49980731983;ELK1,4_GABP{A,B1}:-1.50882582669;TFDP1:-1.54226786445;MYBL2:-1.5683296863;BREu{core}:-1.60195131181;PAX5:-1.61130630502;SOX{8,9,10}:-1.66094790475;HIC1:-1.68125378389;GFI1B:-1.72784093611;NKX2-3_NKX2-5:-1.85140101589;ZNF384:-1.85820400698;NR5A1,2:-1.85943501567;FOX{I1,J2}:-1.89332519421;HOX{A4,D4}:-1.90085006671;ARID5B:-1.9553570314;ONECUT1,2:-1.98231990822;NKX2-1,4:-1.99434837;T:-2.04701019195;CDC5L:-2.11331998422;TBX4,5:-2.15614518872;NFY{A,B,C}:-2.23019308241;SOX17:-2.24651435583;bHLH_family:-2.25212047782;GFI1:-2.28559443891;NRF1:-2.3106089165;LEF1_TCF7_TCF7L1,2:-2.32050845237;ZNF143:-2.63858109724;LHX3,4:-2.69517806006;PBX1:-2.87376277792 | |top_motifs=STAT2,4,6:4.70537868478;STAT1,3:4.19777384016;IRF7:4.09485794335;IRF1,2:3.78873340626;STAT5{A,B}:3.17986788248;NFE2L2:2.81632113569;CEBPA,B_DDIT3:2.61671126687;SPI1:2.51429316509;EP300:2.45712261662;SPIB:2.4344380225;NANOG{mouse}:2.4275918856;SREBF1,2:2.22689717353;NFE2:2.08185698893;PAX2:1.99896406771;TLX2:1.99083012476;FOXN1:1.93154158343;DMAP1_NCOR{1,2}_SMARC:1.90478852849;ETS1,2:1.90381330735;FOSL2:1.82721868797;NR1H4:1.73415267894;NFIL3:1.70295662128;PDX1:1.61016689175;BACH2:1.60218812631;NR6A1:1.52158559062;HLF:1.4874045667;FOS_FOS{B,L1}_JUN{B,D}:1.48134809766;FOXP3:1.41473686674;ELF1,2,4:1.37862088814;NFE2L1:1.36759450907;RXRA_VDR{dimer}:1.26606474117;RUNX1..3:1.20463389224;ATF5_CREB3:1.1934738105;ATF6:1.11993997538;TFCP2:1.0865884932;NFKB1_REL_RELA:1.07091507462;TGIF1:1.00653876645;ESRRA:0.973942640884;SPZ1:0.916869485405;FOXD3:0.851763830691;CDX1,2,4:0.799616746575;HBP1_HMGB_SSRP1_UBTF:0.792167872327;ATF4:0.78533015004;CREB1:0.760939076168;HMX1:0.734820806904;NKX3-2:0.660311070662;ALX4:0.651298177497;MAFB:0.576201876006;FOX{D1,D2}:0.452751769441;BPTF:0.451037930638;GLI1..3:0.444311292931;HIF1A:0.441419874746;ATF2:0.423729595058;HMGA1,2:0.379413274207;PAX3,7:0.366419361835;SMAD1..7,9:0.316430169265;PITX1..3:0.307559809526;FOX{F1,F2,J1}:0.22540526089;HSF1,2:0.224913154877;ESR1:0.198069947352;ZBTB16:0.19143569643;GATA4:0.189040181499;JUN:0.169319342044;MYB:0.153029437554;IKZF2:0.122868720316;PRDM1:0.0682335548746;NKX2-2,8:0.0466795207044;AHR_ARNT_ARNT2:0.0399329991483;FOXO1,3,4:0.0102481316093;TFAP4:-0.00927754575234;EN1,2:-0.0258440272738;XBP1:-0.0357990223858;RFX2..5_RFXANK_RFXAP:-0.079496591919;SRF:-0.0931907627491;MYFfamily:-0.135366708958;RXR{A,B,G}:-0.137808737499;NFIX:-0.163640959628;DBP:-0.200071206457;HOX{A6,A7,B6,B7}:-0.218049004918;NFATC1..3:-0.27205286285;PAX1,9:-0.296792897761;HNF4A_NR2F1,2:-0.298794090223;MZF1:-0.306755860215;NANOG:-0.330577302004;ZNF148:-0.381197626214;HES1:-0.392048672958;FOXM1:-0.438679382977;PAX4:-0.445239520235;TAL1_TCF{3,4,12}:-0.445751603225;PATZ1:-0.453484371917;POU6F1:-0.45999065526;TBP:-0.474444212315;VSX1,2:-0.488153116448;ZNF238:-0.525310840083;REST:-0.540311302631;FOXP1:-0.56028243324;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.568092050937;GATA6:-0.56861029246;POU1F1:-0.577777946343;IKZF1:-0.582627995881;NHLH1,2:-0.584711373258;CUX2:-0.59232384782;TOPORS:-0.594050974539;CRX:-0.601290196973;PAX8:-0.605580766954;MED-1{core}:-0.609005787913;ALX1:-0.61228488441;NKX6-1,2:-0.61932717213;HNF1A:-0.625752733134;MYOD1:-0.633565337413;OCT4_SOX2{dimer}:-0.64312698855;POU2F1..3:-0.657532231334;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.678864346092;PRRX1,2:-0.700957921399;TFAP2{A,C}:-0.705400978065;GCM1,2:-0.720302198655;POU5F1:-0.724418993284;ZBTB6:-0.749250312702;FOXA2:-0.777020794745;FOXL1:-0.801375097656;PPARG:-0.81776638652;EGR1..3:-0.829123415155;EBF1:-0.838728571941;MTF1:-0.839077997137;HAND1,2:-0.851108389561;RREB1:-0.858327275288;HOXA9_MEIS1:-0.873822929955;SOX2:-0.928036477377;MEF2{A,B,C,D}:-0.95228085241;NR3C1:-0.963677548861;EVI1:-0.96539257079;KLF4:-0.998306959656;UFEwm:-1.00209042298;MTE{core}:-1.01774206735;SOX5:-1.01966972185;HOX{A5,B5}:-1.02501963438;TFAP2B:-1.03349264386;ZEB1:-1.03858488105;ZFP161:-1.06484240051;PAX6:-1.08268839482;LMO2:-1.10585933826;MAZ:-1.10604300365;NKX3-1:-1.11755502671;AIRE:-1.11872968741;GTF2I:-1.16521155758;GZF1:-1.16997494583;ZIC1..3:-1.17070925061;SP1:-1.18849453813;TP53:-1.2041366521;FOXQ1:-1.22151900961;TLX1..3_NFIC{dimer}:-1.23368750399;AR:-1.24237562412;SNAI1..3:-1.24327829034;GTF2A1,2:-1.28202079561;XCPE1{core}:-1.29271983034;ADNP_IRX_SIX_ZHX:-1.35097000085;RFX1:-1.35524699211;TEF:-1.38490265055;ZNF423:-1.41836564524;E2F1..5:-1.43464291791;RORA:-1.44774781577;POU3F1..4:-1.45671914342;RBPJ:-1.46807525209;TEAD1:-1.47390811823;YY1:-1.49980731983;ELK1,4_GABP{A,B1}:-1.50882582669;TFDP1:-1.54226786445;MYBL2:-1.5683296863;BREu{core}:-1.60195131181;PAX5:-1.61130630502;SOX{8,9,10}:-1.66094790475;HIC1:-1.68125378389;GFI1B:-1.72784093611;NKX2-3_NKX2-5:-1.85140101589;ZNF384:-1.85820400698;NR5A1,2:-1.85943501567;FOX{I1,J2}:-1.89332519421;HOX{A4,D4}:-1.90085006671;ARID5B:-1.9553570314;ONECUT1,2:-1.98231990822;NKX2-1,4:-1.99434837;T:-2.04701019195;CDC5L:-2.11331998422;TBX4,5:-2.15614518872;NFY{A,B,C}:-2.23019308241;SOX17:-2.24651435583;bHLH_family:-2.25212047782;GFI1:-2.28559443891;NRF1:-2.3106089165;LEF1_TCF7_TCF7L1,2:-2.32050845237;ZNF143:-2.63858109724;LHX3,4:-2.69517806006;PBX1:-2.87376277792 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11861-125A7;search_select_hide=table117:FF:11861-125A7 | |||
}} | }} | ||
Latest revision as of 18:24, 4 June 2020
| Name: | CD14+ monocytes - treated with IFN + N-hexane, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13466 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13466
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13466
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.108 |
| 10 | 10 | 0.0282 |
| 100 | 100 | 0.817 |
| 101 | 101 | 0.795 |
| 102 | 102 | 0.532 |
| 103 | 103 | 0.145 |
| 104 | 104 | 0.625 |
| 105 | 105 | 0.521 |
| 106 | 106 | 6.10285e-4 |
| 107 | 107 | 0.177 |
| 108 | 108 | 0.793 |
| 109 | 109 | 0.152 |
| 11 | 11 | 0.1 |
| 110 | 110 | 0.189 |
| 111 | 111 | 0.0316 |
| 112 | 112 | 0.263 |
| 113 | 113 | 0.652 |
| 114 | 114 | 0.00777 |
| 115 | 115 | 0.365 |
| 116 | 116 | 0.721 |
| 117 | 117 | 0.0568 |
| 118 | 118 | 0.215 |
| 119 | 119 | 0.153 |
| 12 | 12 | 0.471 |
| 120 | 120 | 0.332 |
| 121 | 121 | 0.696 |
| 122 | 122 | 0.582 |
| 123 | 123 | 0.184 |
| 124 | 124 | 0.923 |
| 125 | 125 | 0.37 |
| 126 | 126 | 0.394 |
| 127 | 127 | 0.273 |
| 128 | 128 | 0.0103 |
| 129 | 129 | 0.384 |
| 13 | 13 | 0.18 |
| 130 | 130 | 0.199 |
| 131 | 131 | 0.568 |
| 132 | 132 | 0.0825 |
| 133 | 133 | 0.936 |
| 134 | 134 | 0.606 |
| 135 | 135 | 0.346 |
| 136 | 136 | 0.87 |
| 137 | 137 | 0.0196 |
| 138 | 138 | 0.167 |
| 139 | 139 | 0.0561 |
| 14 | 14 | 0.381 |
| 140 | 140 | 0.253 |
| 141 | 141 | 0.304 |
| 142 | 142 | 0.274 |
| 143 | 143 | 0.0175 |
| 144 | 144 | 0.781 |
| 145 | 145 | 0.278 |
| 146 | 146 | 0.866 |
| 147 | 147 | 0.361 |
| 148 | 148 | 0.013 |
| 149 | 149 | 0.618 |
| 15 | 15 | 0.116 |
| 150 | 150 | 0.42 |
| 151 | 151 | 0.307 |
| 152 | 152 | 0.0816 |
| 153 | 153 | 0.565 |
| 154 | 154 | 0.487 |
| 155 | 155 | 0.481 |
| 156 | 156 | 0.647 |
| 157 | 157 | 0.945 |
| 158 | 158 | 0.172 |
| 159 | 159 | 0.421 |
| 16 | 16 | 0.236 |
| 160 | 160 | 0.368 |
| 161 | 161 | 0.485 |
| 162 | 162 | 0.428 |
| 163 | 163 | 0.148 |
| 164 | 164 | 0.168 |
| 165 | 165 | 0.0456 |
| 166 | 166 | 0.767 |
| 167 | 167 | 0.24 |
| 168 | 168 | 0.269 |
| 169 | 169 | 0.00888 |
| 17 | 17 | 0.166 |
| 18 | 18 | 0.145 |
| 19 | 19 | 0.256 |
| 2 | 2 | 0.97 |
| 20 | 20 | 0.433 |
| 21 | 21 | 0.35 |
| 22 | 22 | 0.23 |
| 23 | 23 | 0.0302 |
| 24 | 24 | 0.208 |
| 25 | 25 | 0.347 |
| 26 | 26 | 0.0384 |
| 27 | 27 | 0.706 |
| 28 | 28 | 0.511 |
| 29 | 29 | 0.242 |
| 3 | 3 | 0.0532 |
| 30 | 30 | 0.675 |
| 31 | 31 | 0.754 |
| 32 | 32 | 0.737 |
| 33 | 33 | 0.344 |
| 34 | 34 | 0.464 |
| 35 | 35 | 0.195 |
| 36 | 36 | 0.168 |
| 37 | 37 | 0.0818 |
| 38 | 38 | 0.448 |
| 39 | 39 | 0.738 |
| 4 | 4 | 0.965 |
| 40 | 40 | 0.308 |
| 41 | 41 | 0.0342 |
| 42 | 42 | 0.316 |
| 43 | 43 | 0.0404 |
| 44 | 44 | 0.563 |
| 45 | 45 | 0.724 |
| 46 | 46 | 0.12 |
| 47 | 47 | 0.365 |
| 48 | 48 | 0.357 |
| 49 | 49 | 0.125 |
| 5 | 5 | 0.221 |
| 50 | 50 | 0.878 |
| 51 | 51 | 0.296 |
| 52 | 52 | 0.198 |
| 53 | 53 | 0.45 |
| 54 | 54 | 0.253 |
| 55 | 55 | 0.229 |
| 56 | 56 | 0.645 |
| 57 | 57 | 0.781 |
| 58 | 58 | 0.0909 |
| 59 | 59 | 0.132 |
| 6 | 6 | 0.64 |
| 60 | 60 | 0.0203 |
| 61 | 61 | 0.71 |
| 62 | 62 | 0.0287 |
| 63 | 63 | 0.351 |
| 64 | 64 | 0.411 |
| 65 | 65 | 0.257 |
| 66 | 66 | 0.339 |
| 67 | 67 | 0.555 |
| 68 | 68 | 0.879 |
| 69 | 69 | 0.525 |
| 7 | 7 | 0.267 |
| 70 | 70 | 0.0142 |
| 71 | 71 | 0.0363 |
| 72 | 72 | 0.106 |
| 73 | 73 | 0.125 |
| 74 | 74 | 0.0486 |
| 75 | 75 | 0.0876 |
| 76 | 76 | 0.372 |
| 77 | 77 | 0.322 |
| 78 | 78 | 0.0698 |
| 79 | 79 | 0.0349 |
| 8 | 8 | 0.31 |
| 80 | 80 | 0.156 |
| 81 | 81 | 0.302 |
| 82 | 82 | 0.0512 |
| 83 | 83 | 0.218 |
| 84 | 84 | 0.353 |
| 85 | 85 | 0.0153 |
| 86 | 86 | 0.0741 |
| 87 | 87 | 0.347 |
| 88 | 88 | 0.516 |
| 89 | 89 | 0.207 |
| 9 | 9 | 0.248 |
| 90 | 90 | 0.0543 |
| 91 | 91 | 0.367 |
| 92 | 92 | 0.125 |
| 93 | 93 | 0.609 |
| 94 | 94 | 0.0437 |
| 95 | 95 | 0.329 |
| 96 | 96 | 0.387 |
| 97 | 97 | 0.856 |
| 98 | 98 | 0.0924 |
| 99 | 99 | 0.213 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13466
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011443 CD14-positive monocytes - treated with IFN + N-hexane sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0000629 (IFN and N-hexane treatment sample)
0011443 (CD14-positive monocytes - treated with IFN + N-hexane sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)
