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{{f5samples
{{f5samples
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|fonse_treatment_closure=FF:0000625,FF:0000628,FF:0011103,FF:11880-125C8
|fonse_treatment_closure=FF:0000625,FF:0000628,FF:0011103,FF:11880-125C8
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520BCG%252c%2520donor3.CNhs13543.11880-125C8.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520BCG%252c%2520donor3.CNhs13543.11880-125C8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520BCG%252c%2520donor3.CNhs13543.11880-125C8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520BCG%252c%2520donor3.CNhs13543.11880-125C8.hg38.nobarcode.ctss.bed.gz
|id=FF:11880-125C8
|id=FF:11880-125C8
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|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11880
|name=CD14+ monocytes - treated with BCG, donor3
|name=CD14+ monocytes - treated with BCG, donor3
|namespace=
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|rna_box=125
|rna_box=125
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 79:
|rna_weight_ug=1.319355
|rna_weight_ug=1.319355
|sample_age=21
|sample_age=21
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_line=
Line 69: Line 92:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.42616411681683e-276!GO:0005737;cytoplasm;3.42171915736109e-126!GO:0043227;membrane-bound organelle;1.11682766894492e-113!GO:0043231;intracellular membrane-bound organelle;2.24927009943506e-113!GO:0043226;organelle;4.23117741304779e-104!GO:0043229;intracellular organelle;2.56648269812656e-103!GO:0044444;cytoplasmic part;3.79240387959762e-83!GO:0044422;organelle part;4.47432291867396e-70!GO:0044446;intracellular organelle part;1.63964183607379e-68!GO:0005515;protein binding;9.30613082241475e-67!GO:0044237;cellular metabolic process;2.09647890900059e-66!GO:0044238;primary metabolic process;2.7896658866566e-64!GO:0032991;macromolecular complex;1.71365344983537e-61!GO:0043170;macromolecule metabolic process;2.51329906314018e-61!GO:0003723;RNA binding;1.09839530179754e-58!GO:0030529;ribonucleoprotein complex;3.94143185550951e-55!GO:0019538;protein metabolic process;9.72302734894784e-48!GO:0044428;nuclear part;1.39041671796334e-46!GO:0044267;cellular protein metabolic process;4.11329985838612e-45!GO:0044260;cellular macromolecule metabolic process;4.92474609423261e-45!GO:0005634;nucleus;5.58619746876537e-45!GO:0006412;translation;4.29546947840047e-43!GO:0033036;macromolecule localization;1.72767411865211e-41!GO:0045184;establishment of protein localization;2.81462777170386e-40!GO:0015031;protein transport;3.34567689296334e-40!GO:0008104;protein localization;1.56708067170646e-38!GO:0043233;organelle lumen;1.77067176863417e-38!GO:0031974;membrane-enclosed lumen;1.77067176863417e-38!GO:0005829;cytosol;1.44403892485298e-36!GO:0006396;RNA processing;1.39195471972971e-33!GO:0043283;biopolymer metabolic process;9.27022377975763e-33!GO:0031090;organelle membrane;1.48001732026465e-32!GO:0016071;mRNA metabolic process;3.10621848769644e-32!GO:0006915;apoptosis;8.86357068463041e-32!GO:0012501;programmed cell death;1.1200926666631e-31!GO:0009059;macromolecule biosynthetic process;1.15465587324102e-31!GO:0010467;gene expression;1.42201193821715e-31!GO:0044249;cellular biosynthetic process;8.56322016962398e-31!GO:0009058;biosynthetic process;9.46643569909784e-31!GO:0043234;protein complex;2.30267580390112e-30!GO:0005739;mitochondrion;2.7876576837371e-30!GO:0008219;cell death;4.08230994214286e-30!GO:0016265;death;4.08230994214286e-30!GO:0031981;nuclear lumen;3.3298019060395e-29!GO:0008380;RNA splicing;4.95358108483964e-29!GO:0005840;ribosome;5.33462401963608e-29!GO:0006397;mRNA processing;5.20314240335464e-28!GO:0046907;intracellular transport;1.26383107694233e-27!GO:0003735;structural constituent of ribosome;1.11219821910938e-26!GO:0006886;intracellular protein transport;1.15532115396609e-26!GO:0031967;organelle envelope;3.53298619403989e-26!GO:0031975;envelope;6.7620069407938e-26!GO:0016043;cellular component organization and biogenesis;8.33044809773924e-25!GO:0033279;ribosomal subunit;1.10411766583054e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.08822094422821e-23!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.06397091845166e-23!GO:0044445;cytosolic part;1.49247863930411e-22!GO:0044429;mitochondrial part;3.81580749561889e-22!GO:0005681;spliceosome;7.46489933325858e-22!GO:0051649;establishment of cellular localization;3.10525026696553e-21!GO:0042981;regulation of apoptosis;4.292073987737e-21!GO:0043067;regulation of programmed cell death;1.09338614432489e-20!GO:0065003;macromolecular complex assembly;1.14784781406896e-20!GO:0051641;cellular localization;1.51448379720172e-20!GO:0000166;nucleotide binding;1.84604238299327e-20!GO:0005654;nucleoplasm;6.13196382551685e-20!GO:0002376;immune system process;7.29305311467452e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.79694551418222e-19!GO:0008134;transcription factor binding;1.91898989131385e-18!GO:0006512;ubiquitin cycle;2.68733457521928e-18!GO:0006119;oxidative phosphorylation;5.50252988758826e-18!GO:0044265;cellular macromolecule catabolic process;8.25355797886601e-18!GO:0007243;protein kinase cascade;1.08252545731396e-17!GO:0005740;mitochondrial envelope;4.5685208615421e-17!GO:0016192;vesicle-mediated transport;5.3503234210599e-17!GO:0048523;negative regulation of cellular process;7.41157817567285e-17!GO:0022607;cellular component assembly;8.62264593582138e-17!GO:0006955;immune response;1.29226545419198e-16!GO:0031966;mitochondrial membrane;1.67261686965592e-16!GO:0044451;nucleoplasm part;2.09149560843681e-16!GO:0043285;biopolymer catabolic process;2.18964919168376e-16!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.18441300737569e-16!GO:0019866;organelle inner membrane;3.68504893470946e-16!GO:0022618;protein-RNA complex assembly;5.73274901035785e-16!GO:0043412;biopolymer modification;6.85930481675007e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.18590032700313e-16!GO:0016462;pyrophosphatase activity;1.04003634702597e-15!GO:0048770;pigment granule;1.05879942318034e-15!GO:0042470;melanosome;1.05879942318034e-15!GO:0017111;nucleoside-triphosphatase activity;1.23163123992895e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.31195338227059e-15!GO:0019941;modification-dependent protein catabolic process;3.71222533119669e-15!GO:0043632;modification-dependent macromolecule catabolic process;3.71222533119669e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;4.66693939177551e-15!GO:0044257;cellular protein catabolic process;5.05719129474918e-15!GO:0032553;ribonucleotide binding;5.17112520948251e-15!GO:0032555;purine ribonucleotide binding;5.17112520948251e-15!GO:0048519;negative regulation of biological process;6.93539920978063e-15!GO:0006511;ubiquitin-dependent protein catabolic process;7.87985854221473e-15!GO:0009057;macromolecule catabolic process;8.48248185998841e-15!GO:0006464;protein modification process;1.36384485785976e-14!GO:0007242;intracellular signaling cascade;1.46816842558214e-14!GO:0017076;purine nucleotide binding;3.09966276979509e-14!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.86845624956003e-14!GO:0043687;post-translational protein modification;5.18381820459466e-14!GO:0006605;protein targeting;6.80331015169521e-14!GO:0000502;proteasome complex (sensu Eukaryota);7.14509771140287e-14!GO:0003676;nucleic acid binding;7.79494717988065e-14!GO:0016874;ligase activity;1.37151588624039e-13!GO:0005773;vacuole;1.46813824169872e-13!GO:0006950;response to stress;1.52425289426644e-13!GO:0043069;negative regulation of programmed cell death;1.5752054268584e-13!GO:0043066;negative regulation of apoptosis;1.90438211478492e-13!GO:0005743;mitochondrial inner membrane;1.91320098826717e-13!GO:0044248;cellular catabolic process;2.14997773110383e-13!GO:0015934;large ribosomal subunit;2.86378337397616e-13!GO:0030163;protein catabolic process;3.86958735130499e-13!GO:0016604;nuclear body;4.89085368469873e-13!GO:0016070;RNA metabolic process;5.680913007089e-13!GO:0044455;mitochondrial membrane part;6.7472003084372e-13!GO:0050794;regulation of cellular process;7.34478510749282e-13!GO:0009615;response to virus;1.51878968380327e-12!GO:0006457;protein folding;1.65762232880384e-12!GO:0051246;regulation of protein metabolic process;1.79983506168983e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.83468687305998e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.13439713742421e-12!GO:0015935;small ribosomal subunit;2.25826998509085e-12!GO:0006913;nucleocytoplasmic transport;2.35367820411539e-12!GO:0008135;translation factor activity, nucleic acid binding;2.99859443887882e-12!GO:0065009;regulation of a molecular function;3.12608403410383e-12!GO:0000323;lytic vacuole;4.08644524335848e-12!GO:0005764;lysosome;4.08644524335848e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.28921690080311e-12!GO:0051169;nuclear transport;4.34609434409753e-12!GO:0012505;endomembrane system;4.60468983622324e-12!GO:0006996;organelle organization and biogenesis;7.13069981425588e-12!GO:0005794;Golgi apparatus;1.56389623326093e-11!GO:0003712;transcription cofactor activity;2.28540844867436e-11!GO:0016607;nuclear speck;2.69109447409368e-11!GO:0003743;translation initiation factor activity;2.96378981584193e-11!GO:0006413;translational initiation;3.63042829042152e-11!GO:0006793;phosphorus metabolic process;4.23226119361058e-11!GO:0006796;phosphate metabolic process;4.23226119361058e-11!GO:0006916;anti-apoptosis;7.54349193812904e-11!GO:0051186;cofactor metabolic process;1.87101397515718e-10!GO:0005768;endosome;1.92586595985794e-10!GO:0005746;mitochondrial respiratory chain;2.31230460902256e-10!GO:0009607;response to biotic stimulus;2.49699644789868e-10!GO:0006259;DNA metabolic process;2.61812766598447e-10!GO:0006446;regulation of translational initiation;3.30380896487872e-10!GO:0050789;regulation of biological process;3.61658995455648e-10!GO:0005730;nucleolus;4.21616943330672e-10!GO:0051082;unfolded protein binding;5.37018922171174e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.00595166518756e-10!GO:0006366;transcription from RNA polymerase II promoter;6.66340305018642e-10!GO:0050136;NADH dehydrogenase (quinone) activity;8.95664891664025e-10!GO:0003954;NADH dehydrogenase activity;8.95664891664025e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.95664891664025e-10!GO:0016310;phosphorylation;9.96351284995979e-10!GO:0048522;positive regulation of cellular process;1.01190887531398e-09!GO:0005524;ATP binding;1.10727457089919e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.1337823187632e-09!GO:0008639;small protein conjugating enzyme activity;1.37139030930422e-09!GO:0009967;positive regulation of signal transduction;1.41864999782324e-09!GO:0006732;coenzyme metabolic process;1.44160227992233e-09!GO:0032559;adenyl ribonucleotide binding;1.56791383019182e-09!GO:0016787;hydrolase activity;1.74661688192845e-09!GO:0019787;small conjugating protein ligase activity;1.86766996199036e-09!GO:0004842;ubiquitin-protein ligase activity;1.92461867036546e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.94757656275088e-09!GO:0000375;RNA splicing, via transesterification reactions;1.94757656275088e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.94757656275088e-09!GO:0031324;negative regulation of cellular metabolic process;1.99059228518832e-09!GO:0006417;regulation of translation;3.59919893032797e-09!GO:0005783;endoplasmic reticulum;3.65504545331597e-09!GO:0048518;positive regulation of biological process;4.12690505793003e-09!GO:0015986;ATP synthesis coupled proton transport;4.12690505793003e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.12690505793003e-09!GO:0005635;nuclear envelope;4.49974550716894e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.22782630831973e-09!GO:0009056;catabolic process;6.08780539256958e-09!GO:0050790;regulation of catalytic activity;6.55763623321596e-09!GO:0019829;cation-transporting ATPase activity;6.78006193766999e-09!GO:0030554;adenyl nucleotide binding;7.32997243675905e-09!GO:0005525;GTP binding;7.75212100092389e-09!GO:0048193;Golgi vesicle transport;9.96955714122148e-09!GO:0006163;purine nucleotide metabolic process;1.02650066596903e-08!GO:0065007;biological regulation;1.04275389672811e-08!GO:0043065;positive regulation of apoptosis;1.37359634239899e-08!GO:0009150;purine ribonucleotide metabolic process;1.46378223356242e-08!GO:0006164;purine nucleotide biosynthetic process;1.48350783059465e-08!GO:0017038;protein import;1.55636455947324e-08!GO:0005770;late endosome;1.56828426822077e-08!GO:0042775;organelle ATP synthesis coupled electron transport;1.57761629262903e-08!GO:0042773;ATP synthesis coupled electron transport;1.57761629262903e-08!GO:0009259;ribonucleotide metabolic process;1.6445921617678e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.90502690489461e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.93647579050946e-08!GO:0043068;positive regulation of programmed cell death;2.24903835940046e-08!GO:0030964;NADH dehydrogenase complex (quinone);2.62123209676167e-08!GO:0045271;respiratory chain complex I;2.62123209676167e-08!GO:0005747;mitochondrial respiratory chain complex I;2.62123209676167e-08!GO:0009892;negative regulation of metabolic process;3.9114479407685e-08!GO:0003924;GTPase activity;4.15344349385408e-08!GO:0000074;regulation of progression through cell cycle;4.99615825997336e-08!GO:0051726;regulation of cell cycle;5.22512130132521e-08!GO:0006754;ATP biosynthetic process;5.37840839030421e-08!GO:0006753;nucleoside phosphate metabolic process;5.37840839030421e-08!GO:0009055;electron carrier activity;5.39312091858066e-08!GO:0009260;ribonucleotide biosynthetic process;5.64980118640884e-08!GO:0009889;regulation of biosynthetic process;5.66797727971309e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.99935910369232e-08!GO:0016881;acid-amino acid ligase activity;6.20944447690282e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.56318615417821e-08!GO:0016887;ATPase activity;9.06629492986291e-08!GO:0042623;ATPase activity, coupled;9.42464828202835e-08!GO:0051170;nuclear import;9.77797812364556e-08!GO:0031326;regulation of cellular biosynthetic process;9.77797812364556e-08!GO:0016564;transcription repressor activity;9.9650843284206e-08!GO:0007049;cell cycle;1.13475517563218e-07!GO:0008047;enzyme activator activity;1.27318951682589e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.50067164252244e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.50067164252244e-07!GO:0044453;nuclear membrane part;1.50679156976263e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.609889013345e-07!GO:0046034;ATP metabolic process;1.75154726021815e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.0856196782863e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.0856196782863e-07!GO:0006606;protein import into nucleus;2.09919975430606e-07!GO:0032561;guanyl ribonucleotide binding;2.09919975430606e-07!GO:0019001;guanyl nucleotide binding;2.09919975430606e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.20905110191967e-07!GO:0006917;induction of apoptosis;2.2906739501838e-07!GO:0009108;coenzyme biosynthetic process;2.30583277896786e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.55000662619266e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.55000662619266e-07!GO:0051188;cofactor biosynthetic process;2.64378306635299e-07!GO:0048468;cell development;2.68097169593123e-07!GO:0007264;small GTPase mediated signal transduction;2.69447428384056e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.70931944764753e-07!GO:0009199;ribonucleoside triphosphate metabolic process;3.29138264389303e-07!GO:0009966;regulation of signal transduction;3.57128221642794e-07!GO:0012502;induction of programmed cell death;3.72671732597322e-07!GO:0031965;nuclear membrane;4.16670524712499e-07!GO:0045786;negative regulation of progression through cell cycle;4.33577057431422e-07!GO:0005793;ER-Golgi intermediate compartment;5.03182427867163e-07!GO:0031980;mitochondrial lumen;5.32734801458654e-07!GO:0005759;mitochondrial matrix;5.32734801458654e-07!GO:0043228;non-membrane-bound organelle;5.78224317801007e-07!GO:0043232;intracellular non-membrane-bound organelle;5.78224317801007e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.88438790293494e-07!GO:0005774;vacuolar membrane;5.90437034188661e-07!GO:0003713;transcription coactivator activity;7.60218182212451e-07!GO:0016481;negative regulation of transcription;7.62315101660035e-07!GO:0009141;nucleoside triphosphate metabolic process;8.35674032233159e-07!GO:0006954;inflammatory response;8.83034064956103e-07!GO:0044432;endoplasmic reticulum part;1.03016563450972e-06!GO:0050657;nucleic acid transport;1.08718428566259e-06!GO:0051236;establishment of RNA localization;1.08718428566259e-06!GO:0050658;RNA transport;1.08718428566259e-06!GO:0006752;group transfer coenzyme metabolic process;1.17543325358524e-06!GO:0008565;protein transporter activity;1.24026621556776e-06!GO:0019899;enzyme binding;1.2601541452035e-06!GO:0006403;RNA localization;1.67169656436377e-06!GO:0006974;response to DNA damage stimulus;1.78419033337119e-06!GO:0004298;threonine endopeptidase activity;2.55486140447616e-06!GO:0044437;vacuolar part;2.83663214686236e-06!GO:0006461;protein complex assembly;3.06609680136705e-06!GO:0004386;helicase activity;3.60032710061826e-06!GO:0005765;lysosomal membrane;3.93169573225489e-06!GO:0044440;endosomal part;4.47384183771757e-06!GO:0010008;endosome membrane;4.47384183771757e-06!GO:0008026;ATP-dependent helicase activity;4.81605786306322e-06!GO:0005643;nuclear pore;5.37192135092004e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.44988091626479e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.45751413458023e-06!GO:0032446;protein modification by small protein conjugation;6.95309429656527e-06!GO:0016044;membrane organization and biogenesis;8.09644354767101e-06!GO:0006888;ER to Golgi vesicle-mediated transport;9.24562347640138e-06!GO:0051789;response to protein stimulus;9.79355129623681e-06!GO:0006986;response to unfolded protein;9.79355129623681e-06!GO:0016567;protein ubiquitination;1.05643280756918e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.06007217546539e-05!GO:0019222;regulation of metabolic process;1.18733833843538e-05!GO:0005789;endoplasmic reticulum membrane;1.20362394690954e-05!GO:0003714;transcription corepressor activity;1.42274658834239e-05!GO:0051707;response to other organism;1.49945646694107e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.53253424281419e-05!GO:0051028;mRNA transport;1.62070498520803e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.66151279407158e-05!GO:0015399;primary active transmembrane transporter activity;1.66151279407158e-05!GO:0016197;endosome transport;1.66151279407158e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.87979761194133e-05!GO:0006952;defense response;2.1843728899355e-05!GO:0043566;structure-specific DNA binding;2.2157157547814e-05!GO:0003724;RNA helicase activity;2.796400809899e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;2.85798964907562e-05!GO:0030099;myeloid cell differentiation;2.91670893518573e-05!GO:0005096;GTPase activator activity;3.02243171623314e-05!GO:0030120;vesicle coat;3.02281682345827e-05!GO:0030662;coated vesicle membrane;3.02281682345827e-05!GO:0016563;transcription activator activity;3.17437369837165e-05!GO:0031982;vesicle;3.17879997387982e-05!GO:0006281;DNA repair;3.35449451464293e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.9324939249377e-05!GO:0016568;chromatin modification;4.12243700419528e-05!GO:0051336;regulation of hydrolase activity;4.12243700419528e-05!GO:0031252;leading edge;4.27020326618215e-05!GO:0042254;ribosome biogenesis and assembly;4.55477862816131e-05!GO:0030695;GTPase regulator activity;4.68901953150789e-05!GO:0006613;cotranslational protein targeting to membrane;4.83097683479383e-05!GO:0048475;coated membrane;4.88029763611986e-05!GO:0030117;membrane coat;4.88029763611986e-05!GO:0030532;small nuclear ribonucleoprotein complex;4.88029763611986e-05!GO:0008632;apoptotic program;5.19478811169975e-05!GO:0006401;RNA catabolic process;5.24016020615669e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.24016020615669e-05!GO:0045259;proton-transporting ATP synthase complex;5.29963354440533e-05!GO:0046930;pore complex;5.37243187292353e-05!GO:0006323;DNA packaging;5.73305156566444e-05!GO:0008234;cysteine-type peptidase activity;6.22411579094836e-05!GO:0022402;cell cycle process;6.34147620164165e-05!GO:0031902;late endosome membrane;6.53440638304261e-05!GO:0003697;single-stranded DNA binding;6.53440638304261e-05!GO:0005761;mitochondrial ribosome;6.69529203547095e-05!GO:0000313;organellar ribosome;6.69529203547095e-05!GO:0001816;cytokine production;6.69529203547095e-05!GO:0030097;hemopoiesis;6.98934771078598e-05!GO:0045321;leukocyte activation;7.06973319255672e-05!GO:0065002;intracellular protein transport across a membrane;7.56203310813333e-05!GO:0009060;aerobic respiration;9.37417606762374e-05!GO:0051168;nuclear export;0.000115182387605837!GO:0051338;regulation of transferase activity;0.00013337204720344!GO:0007005;mitochondrion organization and biogenesis;0.000136966514027339!GO:0009117;nucleotide metabolic process;0.000141076987528437!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000157725993674212!GO:0031988;membrane-bound vesicle;0.000166890652536406!GO:0031410;cytoplasmic vesicle;0.00017905119645782!GO:0000245;spliceosome assembly;0.000195756850607244!GO:0043549;regulation of kinase activity;0.000208560995058581!GO:0043492;ATPase activity, coupled to movement of substances;0.000214366951095755!GO:0006399;tRNA metabolic process;0.000225778588758299!GO:0046983;protein dimerization activity;0.000225778588758299!GO:0007050;cell cycle arrest;0.000231339526521113!GO:0009611;response to wounding;0.000233018568053725!GO:0007034;vacuolar transport;0.000233018568053725!GO:0045859;regulation of protein kinase activity;0.000237847923720798!GO:0005769;early endosome;0.000244970105442753!GO:0005798;Golgi-associated vesicle;0.000245444861284335!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000248299919567919!GO:0022890;inorganic cation transmembrane transporter activity;0.000253116001491148!GO:0007041;lysosomal transport;0.000286865916555083!GO:0005885;Arp2/3 protein complex;0.000288080370349085!GO:0006897;endocytosis;0.000300379783027473!GO:0010324;membrane invagination;0.000300379783027473!GO:0045333;cellular respiration;0.000325811825249624!GO:0046822;regulation of nucleocytoplasmic transport;0.000327027120350015!GO:0032940;secretion by cell;0.000329005951555992!GO:0016740;transferase activity;0.000332272406394725!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000332272406394725!GO:0006818;hydrogen transport;0.000338518330755804!GO:0008186;RNA-dependent ATPase activity;0.000343176158357996!GO:0008654;phospholipid biosynthetic process;0.000352431901275858!GO:0051427;hormone receptor binding;0.000365420184486082!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000391990383427961!GO:0002521;leukocyte differentiation;0.000410216796946237!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000426266089373718!GO:0005057;receptor signaling protein activity;0.000426266089373718!GO:0015992;proton transport;0.000448670174413734!GO:0005083;small GTPase regulator activity;0.000479723190609256!GO:0044431;Golgi apparatus part;0.000499727026476843!GO:0016023;cytoplasmic membrane-bound vesicle;0.000507107333475272!GO:0035257;nuclear hormone receptor binding;0.000571693250111336!GO:0000151;ubiquitin ligase complex;0.000640138738326537!GO:0046519;sphingoid metabolic process;0.000642596212283523!GO:0006402;mRNA catabolic process;0.000676360426691433!GO:0045892;negative regulation of transcription, DNA-dependent;0.000692436454490226!GO:0007259;JAK-STAT cascade;0.000702589127098216!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000703627257236752!GO:0004812;aminoacyl-tRNA ligase activity;0.000703627257236752!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000703627257236752!GO:0006612;protein targeting to membrane;0.000724225998329111!GO:0031323;regulation of cellular metabolic process;0.000752598658278834!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00075420045431536!GO:0007040;lysosome organization and biogenesis;0.000840683357906234!GO:0009719;response to endogenous stimulus;0.000852841082713087!GO:0004674;protein serine/threonine kinase activity;0.000854628022955754!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000864010407104615!GO:0016779;nucleotidyltransferase activity;0.000901738745934499!GO:0002520;immune system development;0.000920994901830635!GO:0051276;chromosome organization and biogenesis;0.000921226243809155!GO:0006672;ceramide metabolic process;0.000935396015246105!GO:0004004;ATP-dependent RNA helicase activity;0.000940812989157159!GO:0003729;mRNA binding;0.000961552859375578!GO:0009893;positive regulation of metabolic process;0.00096922550334543!GO:0043038;amino acid activation;0.000994900525038818!GO:0006418;tRNA aminoacylation for protein translation;0.000994900525038818!GO:0043039;tRNA aminoacylation;0.000994900525038818!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00105531323038233!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0012659399152375!GO:0007265;Ras protein signal transduction;0.00134884174567211!GO:0005637;nuclear inner membrane;0.00136846928022685!GO:0046649;lymphocyte activation;0.0014006844628795!GO:0022415;viral reproductive process;0.00142238183278954!GO:0051090;regulation of transcription factor activity;0.0014607493876141!GO:0051223;regulation of protein transport;0.0014607493876141!GO:0001726;ruffle;0.0014607493876141!GO:0048534;hemopoietic or lymphoid organ development;0.00146432118133659!GO:0007033;vacuole organization and biogenesis;0.00169788264833343!GO:0016072;rRNA metabolic process;0.00171685250983746!GO:0006919;caspase activation;0.0017489566762325!GO:0018193;peptidyl-amino acid modification;0.00174908084121758!GO:0043087;regulation of GTPase activity;0.00176494291908579!GO:0002252;immune effector process;0.00179108640622464!GO:0002274;myeloid leukocyte activation;0.00185087694941267!GO:0033157;regulation of intracellular protein transport;0.00185087694941267!GO:0042306;regulation of protein import into nucleus;0.00185087694941267!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00186211975581132!GO:0009165;nucleotide biosynthetic process;0.00188444194210955!GO:0065004;protein-DNA complex assembly;0.00191536275242244!GO:0005099;Ras GTPase activator activity;0.00192284245747307!GO:0006364;rRNA processing;0.00195192616494283!GO:0031072;heat shock protein binding;0.00200810190777532!GO:0006091;generation of precursor metabolites and energy;0.00218719041930313!GO:0043281;regulation of caspase activity;0.00220470560846629!GO:0006643;membrane lipid metabolic process;0.0022167276185411!GO:0002757;immune response-activating signal transduction;0.00222095118059752!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00222901573061298!GO:0016251;general RNA polymerase II transcription factor activity;0.00225932859212323!GO:0045637;regulation of myeloid cell differentiation;0.00229246775281614!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00233433942122365!GO:0033116;ER-Golgi intermediate compartment membrane;0.00235904973175273!GO:0030149;sphingolipid catabolic process;0.00261107963265061!GO:0043021;ribonucleoprotein binding;0.00269777237161576!GO:0042110;T cell activation;0.00272249677798135!GO:0006099;tricarboxylic acid cycle;0.00272380171543091!GO:0046356;acetyl-CoA catabolic process;0.00272380171543091!GO:0043085;positive regulation of catalytic activity;0.00281448286259127!GO:0002250;adaptive immune response;0.00283333533680221!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00283333533680221!GO:0043280;positive regulation of caspase activity;0.00283693749120635!GO:0005741;mitochondrial outer membrane;0.00284252468747941!GO:0005667;transcription factor complex;0.00288134009127612!GO:0060090;molecular adaptor activity;0.00291878430172081!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00300983825707234!GO:0001775;cell activation;0.00318301464687668!GO:0051187;cofactor catabolic process;0.00362571315052321!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00374012482996002!GO:0043623;cellular protein complex assembly;0.00402668929862581!GO:0045893;positive regulation of transcription, DNA-dependent;0.00443655587922845!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00467315714543939!GO:0048487;beta-tubulin binding;0.00467315714543939!GO:0002764;immune response-regulating signal transduction;0.00478381941989752!GO:0030036;actin cytoskeleton organization and biogenesis;0.00488013708304364!GO:0042990;regulation of transcription factor import into nucleus;0.00488013708304364!GO:0042991;transcription factor import into nucleus;0.00488013708304364!GO:0045941;positive regulation of transcription;0.00490747029527839!GO:0004197;cysteine-type endopeptidase activity;0.00504163906309964!GO:0045454;cell redox homeostasis;0.00505121512279746!GO:0003725;double-stranded RNA binding;0.00514876630277574!GO:0006891;intra-Golgi vesicle-mediated transport;0.00527756926386611!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00527756926386611!GO:0010468;regulation of gene expression;0.00539704148524394!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00555656050240693!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00555656050240693!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00555656050240693!GO:0044262;cellular carbohydrate metabolic process;0.00572744584910258!GO:0006352;transcription initiation;0.00594062388537219!GO:0005813;centrosome;0.00659504336467485!GO:0043433;negative regulation of transcription factor activity;0.00660261617748785!GO:0031325;positive regulation of cellular metabolic process;0.00686693057703421!GO:0003690;double-stranded DNA binding;0.00689127730385286!GO:0006084;acetyl-CoA metabolic process;0.00695577402161939!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0071719701820095!GO:0048500;signal recognition particle;0.00771233205224462!GO:0019882;antigen processing and presentation;0.00779404255431725!GO:0031968;organelle outer membrane;0.00789068581935102!GO:0019867;outer membrane;0.00848684257194188!GO:0031901;early endosome membrane;0.00849279480579625!GO:0004185;serine carboxypeptidase activity;0.00868809503758256!GO:0000139;Golgi membrane;0.0089137665801236!GO:0046966;thyroid hormone receptor binding;0.0089137665801236!GO:0042802;identical protein binding;0.00891589556638073!GO:0009109;coenzyme catabolic process;0.00894989989819763!GO:0030658;transport vesicle membrane;0.00923344417875382!GO:0045045;secretory pathway;0.00926095660883657!GO:0006607;NLS-bearing substrate import into nucleus;0.00928782649194151!GO:0033673;negative regulation of kinase activity;0.0094005863811596!GO:0006469;negative regulation of protein kinase activity;0.0094005863811596!GO:0008383;manganese superoxide dismutase activity;0.00941040986927164!GO:0001315;age-dependent response to reactive oxygen species;0.00941040986927164!GO:0016363;nuclear matrix;0.00978970251851709!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0102782621758401!GO:0016301;kinase activity;0.0102782621758401!GO:0019377;glycolipid catabolic process;0.0104937225898903!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0105811277587586!GO:0045047;protein targeting to ER;0.0105811277587586!GO:0000209;protein polyubiquitination;0.0108580162491133!GO:0002682;regulation of immune system process;0.0111623285909877!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0113557513463536!GO:0030693;caspase activity;0.0114146423467758!GO:0051348;negative regulation of transferase activity;0.0116947741272804!GO:0002684;positive regulation of immune system process;0.0119198259289986!GO:0051092;activation of NF-kappaB transcription factor;0.0121261774926295!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0121787210213994!GO:0006611;protein export from nucleus;0.012229510578203!GO:0005484;SNAP receptor activity;0.0123143686614778!GO:0019079;viral genome replication;0.0124572069424864!GO:0032386;regulation of intracellular transport;0.0125530594419645!GO:0031625;ubiquitin protein ligase binding;0.013106938118971!GO:0002443;leukocyte mediated immunity;0.013106938118971!GO:0019210;kinase inhibitor activity;0.0133040960909212!GO:0051540;metal cluster binding;0.0133040960909212!GO:0051536;iron-sulfur cluster binding;0.0133040960909212!GO:0032318;regulation of Ras GTPase activity;0.0133045565817465!GO:0006458;'de novo' protein folding;0.0134178677060023!GO:0051084;'de novo' posttranslational protein folding;0.0134178677060023!GO:0001819;positive regulation of cytokine production;0.0135689465940257!GO:0051098;regulation of binding;0.0135689465940257!GO:0006368;RNA elongation from RNA polymerase II promoter;0.014036283488852!GO:0016791;phosphoric monoester hydrolase activity;0.0141692013665985!GO:0030867;rough endoplasmic reticulum membrane;0.0143309285676232!GO:0004860;protein kinase inhibitor activity;0.0145132901024904!GO:0002440;production of molecular mediator of immune response;0.0145132901024904!GO:0033367;protein localization in mast cell secretory granule;0.0145132901024904!GO:0033365;protein localization in organelle;0.0145132901024904!GO:0033371;T cell secretory granule organization and biogenesis;0.0145132901024904!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0145132901024904!GO:0033375;protease localization in T cell secretory granule;0.0145132901024904!GO:0042629;mast cell granule;0.0145132901024904!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0145132901024904!GO:0033364;mast cell secretory granule organization and biogenesis;0.0145132901024904!GO:0033380;granzyme B localization in T cell secretory granule;0.0145132901024904!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0145132901024904!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0145132901024904!GO:0033368;protease localization in mast cell secretory granule;0.0145132901024904!GO:0033366;protein localization in secretory granule;0.0145132901024904!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0145132901024904!GO:0033374;protein localization in T cell secretory granule;0.0145132901024904!GO:0046467;membrane lipid biosynthetic process;0.0147005607903649!GO:0030127;COPII vesicle coat;0.0148186546105733!GO:0012507;ER to Golgi transport vesicle membrane;0.0148186546105733!GO:0001817;regulation of cytokine production;0.0150114691571824!GO:0002467;germinal center formation;0.0151517556649186!GO:0006414;translational elongation;0.0154398665119407!GO:0005815;microtubule organizing center;0.0157552981204524!GO:0032763;regulation of mast cell cytokine production;0.0161289765973559!GO:0032762;mast cell cytokine production;0.0161289765973559!GO:0005070;SH3/SH2 adaptor activity;0.0161657595405383!GO:0030134;ER to Golgi transport vesicle;0.0163303135075125!GO:0019883;antigen processing and presentation of endogenous antigen;0.0164997742084794!GO:0050778;positive regulation of immune response;0.0165469887678166!GO:0043022;ribosome binding;0.0165680894464084!GO:0051059;NF-kappaB binding;0.0165680894464084!GO:0030218;erythrocyte differentiation;0.0168410967594427!GO:0002573;myeloid leukocyte differentiation;0.0169108349605116!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0169864781578029!GO:0008312;7S RNA binding;0.0170205227188021!GO:0042613;MHC class II protein complex;0.0177121573584351!GO:0000082;G1/S transition of mitotic cell cycle;0.0180092379222174!GO:0030518;steroid hormone receptor signaling pathway;0.0184868950502853!GO:0048146;positive regulation of fibroblast proliferation;0.0186090298546823!GO:0030663;COPI coated vesicle membrane;0.0186923635644859!GO:0030126;COPI vesicle coat;0.0186923635644859!GO:0051247;positive regulation of protein metabolic process;0.0187760386285717!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.019241993687967!GO:0006333;chromatin assembly or disassembly;0.0192514276482555!GO:0002237;response to molecule of bacterial origin;0.0197673225987389!GO:0051345;positive regulation of hydrolase activity;0.0200186020136377!GO:0048002;antigen processing and presentation of peptide antigen;0.0201375417382242!GO:0008333;endosome to lysosome transport;0.0202567944033854!GO:0006749;glutathione metabolic process;0.0203221541889614!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0204966223346678!GO:0002819;regulation of adaptive immune response;0.0204966223346678!GO:0030660;Golgi-associated vesicle membrane;0.0205415173227671!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0205656503755535!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0205656503755535!GO:0045639;positive regulation of myeloid cell differentiation;0.0207129586840075!GO:0030224;monocyte differentiation;0.0210554806726395!GO:0030521;androgen receptor signaling pathway;0.0211342672253988!GO:0030027;lamellipodium;0.0211443136638618!GO:0000049;tRNA binding;0.0211554098524899!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0211933047386609!GO:0006350;transcription;0.0212492013009428!GO:0019783;small conjugating protein-specific protease activity;0.0215464570019844!GO:0030217;T cell differentiation;0.0218752784745105!GO:0000339;RNA cap binding;0.0219104724147156!GO:0006468;protein amino acid phosphorylation;0.0219104724147156!GO:0046466;membrane lipid catabolic process;0.0223186261436684!GO:0015036;disulfide oxidoreductase activity;0.0223471066352857!GO:0006665;sphingolipid metabolic process;0.0223746817664063!GO:0030029;actin filament-based process;0.0227987679975808!GO:0002224;toll-like receptor signaling pathway;0.0227987679975808!GO:0002221;pattern recognition receptor signaling pathway;0.0227987679975808!GO:0050811;GABA receptor binding;0.022828471595718!GO:0006935;chemotaxis;0.0229684998160675!GO:0042330;taxis;0.0229684998160675!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.023455947152876!GO:0042108;positive regulation of cytokine biosynthetic process;0.0236198654488356!GO:0015631;tubulin binding;0.0236885054225888!GO:0006405;RNA export from nucleus;0.0238936985976123!GO:0050776;regulation of immune response;0.0239379967642605!GO:0030258;lipid modification;0.0240583805057715!GO:0030503;regulation of cell redox homeostasis;0.0240666095097396!GO:0019058;viral infectious cycle;0.0242303659951103!GO:0008637;apoptotic mitochondrial changes;0.0242890488326568!GO:0051252;regulation of RNA metabolic process;0.0243608345377469!GO:0030176;integral to endoplasmic reticulum membrane;0.0247170888053228!GO:0046479;glycosphingolipid catabolic process;0.0249568401988191!GO:0006650;glycerophospholipid metabolic process;0.0252692717990542!GO:0002697;regulation of immune effector process;0.0252782259316017!GO:0017091;AU-rich element binding;0.0253869779202112!GO:0050779;RNA destabilization;0.0253869779202112!GO:0000289;poly(A) tail shortening;0.0253869779202112!GO:0030041;actin filament polymerization;0.0256481156075263!GO:0030384;phosphoinositide metabolic process;0.0259518186165028!GO:0051329;interphase of mitotic cell cycle;0.0259559656572501!GO:0030137;COPI-coated vesicle;0.0261477147444026!GO:0006260;DNA replication;0.0265746498931103!GO:0003727;single-stranded RNA binding;0.0269970943357027!GO:0019220;regulation of phosphate metabolic process;0.0270428630269089!GO:0051174;regulation of phosphorus metabolic process;0.0270428630269089!GO:0048144;fibroblast proliferation;0.0273523387799379!GO:0048145;regulation of fibroblast proliferation;0.0273523387799379!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0279438871463095!GO:0004843;ubiquitin-specific protease activity;0.0280737576465533!GO:0046979;TAP2 binding;0.0283423584141958!GO:0046977;TAP binding;0.0283423584141958!GO:0046978;TAP1 binding;0.0283423584141958!GO:0004177;aminopeptidase activity;0.0283855252157201!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0288762107842056!GO:0030133;transport vesicle;0.0289771732134731!GO:0000287;magnesium ion binding;0.0292638731501994!GO:0008139;nuclear localization sequence binding;0.0292804418469389!GO:0005048;signal sequence binding;0.0292899292262274!GO:0045792;negative regulation of cell size;0.0299382445869416!GO:0043621;protein self-association;0.0301907700148292!GO:0050851;antigen receptor-mediated signaling pathway;0.0304690293685677!GO:0000278;mitotic cell cycle;0.0304690293685677!GO:0006984;ER-nuclear signaling pathway;0.0306152699115785!GO:0015923;mannosidase activity;0.0307999976114742!GO:0051091;positive regulation of transcription factor activity;0.0309932294273105!GO:0019318;hexose metabolic process;0.0311127677524363!GO:0042221;response to chemical stimulus;0.0314551460047045!GO:0008538;proteasome activator activity;0.031704558354319!GO:0051101;regulation of DNA binding;0.0321810280099475!GO:0019843;rRNA binding;0.032234781175005!GO:0051087;chaperone binding;0.032234781175005!GO:0033033;negative regulation of myeloid cell apoptosis;0.032234781175005!GO:0001803;regulation of type III hypersensitivity;0.032234781175005!GO:0032733;positive regulation of interleukin-10 production;0.032234781175005!GO:0033025;regulation of mast cell apoptosis;0.032234781175005!GO:0001805;positive regulation of type III hypersensitivity;0.032234781175005!GO:0033023;mast cell homeostasis;0.032234781175005!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.032234781175005!GO:0033032;regulation of myeloid cell apoptosis;0.032234781175005!GO:0001802;type III hypersensitivity;0.032234781175005!GO:0033028;myeloid cell apoptosis;0.032234781175005!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.032234781175005!GO:0033026;negative regulation of mast cell apoptosis;0.032234781175005!GO:0033024;mast cell apoptosis;0.032234781175005!GO:0016408;C-acyltransferase activity;0.0324650498030343!GO:0032760;positive regulation of tumor necrosis factor production;0.032508630687869!GO:0006644;phospholipid metabolic process;0.033246320772692!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.033969141939368!GO:0043300;regulation of leukocyte degranulation;0.034309596041783!GO:0030308;negative regulation of cell growth;0.0346922000726193!GO:0000738;DNA catabolic process, exonucleolytic;0.0354169215592126!GO:0002444;myeloid leukocyte mediated immunity;0.035482244608686!GO:0019207;kinase regulator activity;0.0357774391620894!GO:0050900;leukocyte migration;0.035842857127727!GO:0005684;U2-dependent spliceosome;0.035842857127727!GO:0051085;chaperone cofactor-dependent protein folding;0.0360384671064151!GO:0051251;positive regulation of lymphocyte activation;0.0365774081997372!GO:0045646;regulation of erythrocyte differentiation;0.0368745302114936!GO:0008624;induction of apoptosis by extracellular signals;0.0369850397525945!GO:0007006;mitochondrial membrane organization and biogenesis;0.0370136864105818!GO:0030118;clathrin coat;0.0370136864105818!GO:0051023;regulation of immunoglobulin secretion;0.0370136864105818!GO:0045994;positive regulation of translational initiation by iron;0.0370136864105818!GO:0005996;monosaccharide metabolic process;0.0370375596540617!GO:0006383;transcription from RNA polymerase III promoter;0.0372957104547773!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0373730487789372!GO:0002821;positive regulation of adaptive immune response;0.0373730487789372!GO:0005869;dynactin complex;0.0379197144403906!GO:0005152;interleukin-1 receptor antagonist activity;0.0379197144403906!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0379197144403906!GO:0051325;interphase;0.0382930745065375!GO:0000785;chromatin;0.0384440090972559!GO:0005669;transcription factor TFIID complex;0.0384440090972559!GO:0009306;protein secretion;0.0385723502070592!GO:0002253;activation of immune response;0.0393942296115334!GO:0051052;regulation of DNA metabolic process;0.0393998581258425!GO:0030098;lymphocyte differentiation;0.0395156633925264!GO:0043681;protein import into mitochondrion;0.0399304485167578!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0403679239006108!GO:0019904;protein domain specific binding;0.0408806439637216!GO:0016272;prefoldin complex;0.0410113560614269!GO:0048471;perinuclear region of cytoplasm;0.0410113560614269!GO:0030433;ER-associated protein catabolic process;0.0410757676375354!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0410757676375354!GO:0019901;protein kinase binding;0.0410816642698262!GO:0006354;RNA elongation;0.0417837794452222!GO:0016491;oxidoreductase activity;0.042149655761469!GO:0008629;induction of apoptosis by intracellular signals;0.0422182797376097!GO:0045576;mast cell activation;0.042469912424003!GO:0045113;regulation of integrin biosynthetic process;0.042469912424003!GO:0045112;integrin biosynthetic process;0.042469912424003!GO:0005694;chromosome;0.0432783721376308!GO:0002449;lymphocyte mediated immunity;0.0433699960143662!GO:0042348;NF-kappaB import into nucleus;0.0443973714410778!GO:0042345;regulation of NF-kappaB import into nucleus;0.0443973714410778!GO:0043407;negative regulation of MAP kinase activity;0.0450495331522783!GO:0043488;regulation of mRNA stability;0.0456163392594856!GO:0043487;regulation of RNA stability;0.0456163392594856!GO:0003702;RNA polymerase II transcription factor activity;0.0456163392594856!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0463674558320841!GO:0006465;signal peptide processing;0.0463700453997726!GO:0016311;dephosphorylation;0.0463700453997726!GO:0000096;sulfur amino acid metabolic process;0.0470419279740454!GO:0000165;MAPKKK cascade;0.0478324584271306!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0478643612382529!GO:0006261;DNA-dependent DNA replication;0.0478791498827715!GO:0042611;MHC protein complex;0.0486453661198267!GO:0046483;heterocycle metabolic process;0.0486453661198267!GO:0045746;negative regulation of Notch signaling pathway;0.0490404589050344!GO:0030968;unfolded protein response;0.0495491334602549!GO:0006302;double-strand break repair;0.0496664634035098!GO:0001516;prostaglandin biosynthetic process;0.0498023860291408!GO:0046457;prostanoid biosynthetic process;0.0498023860291408!GO:0033549;MAP kinase phosphatase activity;0.0498938444295177!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0498938444295177!GO:0003711;transcription elongation regulator activity;0.04998164455312
|sample_id=11880
|sample_id=11880
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=
|sample_tissue=
|top_motifs=STAT5{A,B}:7.26373686279;STAT2,4,6:6.51422901718;FOSL2:5.70940310683;IRF7:5.49594908509;NFE2:5.4215323612;HLF:5.30363872559;NFE2L2:5.22224551507;FOS_FOS{B,L1}_JUN{B,D}:5.17275608512;CEBPA,B_DDIT3:5.14645494241;IRF1,2:4.88054584261;BACH2:4.86452619451;STAT1,3:4.76034948152;NFIL3:4.70536769893;PAX2:3.94504814512;NANOG{mouse}:3.9189338413;SPIB:3.8701073742;FOXP3:3.65895656622;HSF1,2:3.53500824816;NFKB1_REL_RELA:3.49543753505;SPI1:3.33287162064;SREBF1,2:3.28623889666;ETS1,2:3.26100287537;NFATC1..3:2.95054499329;ATF5_CREB3:2.86646459656;ATF6:2.75929506467;PAX8:2.68630393329;RUNX1..3:2.64528534748;ATF4:2.5995905807;NR1H4:2.49045994754;DMAP1_NCOR{1,2}_SMARC:2.48158394414;ATF2:2.38559876621;EP300:2.36238598272;JUN:2.30320334105;NFE2L1:2.2001500042;CDX1,2,4:2.12352224822;CREB1:2.09298253912;FOXN1:2.09285340172;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.97777770403;TGIF1:1.96059761265;ALX4:1.86082149491;ELF1,2,4:1.8492830891;MAFB:1.82230991968;HIF1A:1.27047837167;HOX{A5,B5}:1.0697840091;XBP1:1.06387672871;PAX3,7:0.988690524363;RXRA_VDR{dimer}:0.978911953555;RBPJ:0.96306210028;HMGA1,2:0.925045688762;SRF:0.827705111849;PPARG:0.799861101015;PDX1:0.741020121787;ZBTB16:0.630660147956;FOXO1,3,4:0.607180836616;AHR_ARNT_ARNT2:0.415732894315;TLX2:0.395958534649;EN1,2:0.320886601784;IKZF1:0.295532408786;VSX1,2:0.27014257041;NR6A1:0.245410721007;MEF2{A,B,C,D}:0.215366314476;HMX1:0.202741943959;TBP:0.184598884758;PRDM1:0.0690697004437;NANOG:0.0240022717422;GLI1..3:-0.00259387167336;HOXA9_MEIS1:-0.0921760272026;NR3C1:-0.112522168102;BPTF:-0.158536533591;HBP1_HMGB_SSRP1_UBTF:-0.19307207282;FOX{D1,D2}:-0.244818540579;SPZ1:-0.254549664049;ESRRA:-0.279866411438;OCT4_SOX2{dimer}:-0.283106523086;ALX1:-0.374440239383;GATA4:-0.390074010342;IKZF2:-0.401804668274;RFX2..5_RFXANK_RFXAP:-0.43842035297;MYB:-0.466144887138;RORA:-0.469061079797;POU2F1..3:-0.489799113258;FOX{F1,F2,J1}:-0.530924334385;SMAD1..7,9:-0.572347992455;TAL1_TCF{3,4,12}:-0.58345113336;PAX1,9:-0.601964614462;TFCP2:-0.617256474368;PAX6:-0.647507243209;FOXM1:-0.664232323565;SOX2:-0.710666397496;POU5F1:-0.763729552687;EGR1..3:-0.856663073272;HES1:-0.857168382564;ESR1:-0.878788747174;DBP:-0.895038031227;PAX4:-0.929092813489;RFX1:-1.01045776323;PRRX1,2:-1.05536387967;NKX2-1,4:-1.19270307381;REST:-1.19326024556;NHLH1,2:-1.2161638671;ZNF238:-1.22926572835;MZF1:-1.23320059459;HNF4A_NR2F1,2:-1.36008106182;RXR{A,B,G}:-1.36916065987;HNF1A:-1.39508088942;TFAP4:-1.4352193623;TEF:-1.44287385839;FOXL1:-1.45937823999;NKX3-1:-1.4610215736;PITX1..3:-1.52511558233;MYFfamily:-1.53353986942;NFIX:-1.54198046101;HOX{A6,A7,B6,B7}:-1.5688061911;GATA6:-1.58753281225;CRX:-1.61053063012;E2F1..5:-1.63333357554;FOXD3:-1.64974744086;FOXA2:-1.65882366199;NKX2-3_NKX2-5:-1.66687635663;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.71631393468;NKX3-2:-1.72189948411;MED-1{core}:-1.7298222708;MTE{core}:-1.80240470856;POU3F1..4:-1.82787988495;TEAD1:-1.83466468878;SOX5:-1.85985019112;ELK1,4_GABP{A,B1}:-1.87950446322;BREu{core}:-1.88121590305;CUX2:-1.88768442131;ADNP_IRX_SIX_ZHX:-1.90846764048;CDC5L:-1.91851213727;ZFP161:-1.92462377467;NKX2-2,8:-1.92936974329;ZBTB6:-1.94324399804;MYBL2:-1.95119089887;T:-1.96855089256;SP1:-1.97129787861;PATZ1:-1.97468046765;GZF1:-1.99347021768;ZEB1:-1.99621013837;GTF2A1,2:-2.00862664538;NKX6-1,2:-2.02390061471;GFI1B:-2.07682911594;MTF1:-2.09964982259;TLX1..3_NFIC{dimer}:-2.10120718521;GTF2I:-2.10395174287;TP53:-2.11385745404;FOX{I1,J2}:-2.11575862831;TFAP2B:-2.13824582714;FOXP1:-2.14004649915;POU6F1:-2.14185089061;TFDP1:-2.17182438479;HOX{A4,D4}:-2.21300950771;MAZ:-2.22169770164;SNAI1..3:-2.24502755547;POU1F1:-2.26298888597;MYOD1:-2.28304817387;SOX{8,9,10}:-2.28873423994;PBX1:-2.34285916596;XCPE1{core}:-2.34376405822;ZNF148:-2.35577459856;ZNF384:-2.38592878015;NFY{A,B,C}:-2.38609287832;KLF4:-2.54231616251;ZIC1..3:-2.55497504484;GCM1,2:-2.56348801515;bHLH_family:-2.61855914844;NR5A1,2:-2.6515921884;EBF1:-2.66205659356;HIC1:-2.69126703232;ONECUT1,2:-2.73783089073;FOXQ1:-2.7465238049;GFI1:-2.74918020362;AIRE:-2.7628359221;TFAP2{A,C}:-2.76537678064;TBX4,5:-2.81321480751;YY1:-2.84444234685;SOX17:-2.88540484236;UFEwm:-2.90368870597;RREB1:-2.94366777571;ARID5B:-2.95611859136;NRF1:-2.97348836598;PAX5:-3.05427212414;LMO2:-3.23721275806;EVI1:-3.39432936098;AR:-3.47476036207;HAND1,2:-3.5161587192;ZNF143:-3.68146913265;LHX3,4:-3.86681483584;ZNF423:-3.89980057588;LEF1_TCF7_TCF7L1,2:-4.09551995992;TOPORS:-4.22336293132
|top_motifs=STAT5{A,B}:7.26373686279;STAT2,4,6:6.51422901718;FOSL2:5.70940310683;IRF7:5.49594908509;NFE2:5.4215323612;HLF:5.30363872559;NFE2L2:5.22224551507;FOS_FOS{B,L1}_JUN{B,D}:5.17275608512;CEBPA,B_DDIT3:5.14645494241;IRF1,2:4.88054584261;BACH2:4.86452619451;STAT1,3:4.76034948152;NFIL3:4.70536769893;PAX2:3.94504814512;NANOG{mouse}:3.9189338413;SPIB:3.8701073742;FOXP3:3.65895656622;HSF1,2:3.53500824816;NFKB1_REL_RELA:3.49543753505;SPI1:3.33287162064;SREBF1,2:3.28623889666;ETS1,2:3.26100287537;NFATC1..3:2.95054499329;ATF5_CREB3:2.86646459656;ATF6:2.75929506467;PAX8:2.68630393329;RUNX1..3:2.64528534748;ATF4:2.5995905807;NR1H4:2.49045994754;DMAP1_NCOR{1,2}_SMARC:2.48158394414;ATF2:2.38559876621;EP300:2.36238598272;JUN:2.30320334105;NFE2L1:2.2001500042;CDX1,2,4:2.12352224822;CREB1:2.09298253912;FOXN1:2.09285340172;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.97777770403;TGIF1:1.96059761265;ALX4:1.86082149491;ELF1,2,4:1.8492830891;MAFB:1.82230991968;HIF1A:1.27047837167;HOX{A5,B5}:1.0697840091;XBP1:1.06387672871;PAX3,7:0.988690524363;RXRA_VDR{dimer}:0.978911953555;RBPJ:0.96306210028;HMGA1,2:0.925045688762;SRF:0.827705111849;PPARG:0.799861101015;PDX1:0.741020121787;ZBTB16:0.630660147956;FOXO1,3,4:0.607180836616;AHR_ARNT_ARNT2:0.415732894315;TLX2:0.395958534649;EN1,2:0.320886601784;IKZF1:0.295532408786;VSX1,2:0.27014257041;NR6A1:0.245410721007;MEF2{A,B,C,D}:0.215366314476;HMX1:0.202741943959;TBP:0.184598884758;PRDM1:0.0690697004437;NANOG:0.0240022717422;GLI1..3:-0.00259387167336;HOXA9_MEIS1:-0.0921760272026;NR3C1:-0.112522168102;BPTF:-0.158536533591;HBP1_HMGB_SSRP1_UBTF:-0.19307207282;FOX{D1,D2}:-0.244818540579;SPZ1:-0.254549664049;ESRRA:-0.279866411438;OCT4_SOX2{dimer}:-0.283106523086;ALX1:-0.374440239383;GATA4:-0.390074010342;IKZF2:-0.401804668274;RFX2..5_RFXANK_RFXAP:-0.43842035297;MYB:-0.466144887138;RORA:-0.469061079797;POU2F1..3:-0.489799113258;FOX{F1,F2,J1}:-0.530924334385;SMAD1..7,9:-0.572347992455;TAL1_TCF{3,4,12}:-0.58345113336;PAX1,9:-0.601964614462;TFCP2:-0.617256474368;PAX6:-0.647507243209;FOXM1:-0.664232323565;SOX2:-0.710666397496;POU5F1:-0.763729552687;EGR1..3:-0.856663073272;HES1:-0.857168382564;ESR1:-0.878788747174;DBP:-0.895038031227;PAX4:-0.929092813489;RFX1:-1.01045776323;PRRX1,2:-1.05536387967;NKX2-1,4:-1.19270307381;REST:-1.19326024556;NHLH1,2:-1.2161638671;ZNF238:-1.22926572835;MZF1:-1.23320059459;HNF4A_NR2F1,2:-1.36008106182;RXR{A,B,G}:-1.36916065987;HNF1A:-1.39508088942;TFAP4:-1.4352193623;TEF:-1.44287385839;FOXL1:-1.45937823999;NKX3-1:-1.4610215736;PITX1..3:-1.52511558233;MYFfamily:-1.53353986942;NFIX:-1.54198046101;HOX{A6,A7,B6,B7}:-1.5688061911;GATA6:-1.58753281225;CRX:-1.61053063012;E2F1..5:-1.63333357554;FOXD3:-1.64974744086;FOXA2:-1.65882366199;NKX2-3_NKX2-5:-1.66687635663;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.71631393468;NKX3-2:-1.72189948411;MED-1{core}:-1.7298222708;MTE{core}:-1.80240470856;POU3F1..4:-1.82787988495;TEAD1:-1.83466468878;SOX5:-1.85985019112;ELK1,4_GABP{A,B1}:-1.87950446322;BREu{core}:-1.88121590305;CUX2:-1.88768442131;ADNP_IRX_SIX_ZHX:-1.90846764048;CDC5L:-1.91851213727;ZFP161:-1.92462377467;NKX2-2,8:-1.92936974329;ZBTB6:-1.94324399804;MYBL2:-1.95119089887;T:-1.96855089256;SP1:-1.97129787861;PATZ1:-1.97468046765;GZF1:-1.99347021768;ZEB1:-1.99621013837;GTF2A1,2:-2.00862664538;NKX6-1,2:-2.02390061471;GFI1B:-2.07682911594;MTF1:-2.09964982259;TLX1..3_NFIC{dimer}:-2.10120718521;GTF2I:-2.10395174287;TP53:-2.11385745404;FOX{I1,J2}:-2.11575862831;TFAP2B:-2.13824582714;FOXP1:-2.14004649915;POU6F1:-2.14185089061;TFDP1:-2.17182438479;HOX{A4,D4}:-2.21300950771;MAZ:-2.22169770164;SNAI1..3:-2.24502755547;POU1F1:-2.26298888597;MYOD1:-2.28304817387;SOX{8,9,10}:-2.28873423994;PBX1:-2.34285916596;XCPE1{core}:-2.34376405822;ZNF148:-2.35577459856;ZNF384:-2.38592878015;NFY{A,B,C}:-2.38609287832;KLF4:-2.54231616251;ZIC1..3:-2.55497504484;GCM1,2:-2.56348801515;bHLH_family:-2.61855914844;NR5A1,2:-2.6515921884;EBF1:-2.66205659356;HIC1:-2.69126703232;ONECUT1,2:-2.73783089073;FOXQ1:-2.7465238049;GFI1:-2.74918020362;AIRE:-2.7628359221;TFAP2{A,C}:-2.76537678064;TBX4,5:-2.81321480751;YY1:-2.84444234685;SOX17:-2.88540484236;UFEwm:-2.90368870597;RREB1:-2.94366777571;ARID5B:-2.95611859136;NRF1:-2.97348836598;PAX5:-3.05427212414;LMO2:-3.23721275806;EVI1:-3.39432936098;AR:-3.47476036207;HAND1,2:-3.5161587192;ZNF143:-3.68146913265;LHX3,4:-3.86681483584;ZNF423:-3.89980057588;LEF1_TCF7_TCF7L1,2:-4.09551995992;TOPORS:-4.22336293132
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11880-125C8;search_select_hide=table117:FF:11880-125C8
}}
}}

Latest revision as of 18:26, 4 June 2020

Name:CD14+ monocytes - treated with BCG, donor3
Species:Human (Homo sapiens)
Library ID:CNhs13543
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexfemale
age21
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD5-1
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005081
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13543 CAGE DRX008140 DRR009012
Accession ID Hg19

Library idBAMCTSS
CNhs13543 DRZ000437 DRZ001822
Accession ID Hg38

Library idBAMCTSS
CNhs13543 DRZ011787 DRZ013172
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.721
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.158
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.584
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.453
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
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C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.289
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13543

Jaspar motifP-value
MA0002.21.36583e-9
MA0003.10.639
MA0004.10.218
MA0006.10.663
MA0007.10.714
MA0009.10.79
MA0014.10.441
MA0017.10.108
MA0018.20.129
MA0019.10.82
MA0024.10.00806
MA0025.10.0019
MA0027.10.915
MA0028.10.443
MA0029.10.186
MA0030.10.263
MA0031.10.434
MA0035.20.27
MA0038.10.633
MA0039.20.932
MA0040.10.292
MA0041.10.545
MA0042.10.918
MA0043.17.25884e-8
MA0046.10.0228
MA0047.20.634
MA0048.10.652
MA0050.11.48174e-16
MA0051.11.24304e-10
MA0052.10.0359
MA0055.10.561
MA0057.10.575
MA0058.10.071
MA0059.10.0876
MA0060.17.81439e-8
MA0061.15.99181e-12
MA0062.20.12
MA0065.20.0123
MA0066.10.0347
MA0067.13.49943e-6
MA0068.10.872
MA0069.10.58
MA0070.10.00978
MA0071.10.407
MA0072.10.601
MA0073.10.395
MA0074.10.14
MA0076.10.505
MA0077.10.177
MA0078.10.481
MA0079.20.171
MA0080.25.52976e-12
MA0081.13.8826e-4
MA0083.10.422
MA0084.10.85
MA0087.10.76
MA0088.10.821
MA0090.10.49
MA0091.10.672
MA0092.10.303
MA0093.10.248
MA0099.23.96835e-42
MA0100.10.925
MA0101.15.19139e-13
MA0102.22.19192e-8
MA0103.10.0688
MA0104.20.19
MA0105.11.14841e-15
MA0106.10.959
MA0107.13.76824e-16
MA0108.20.383
MA0111.10.584
MA0112.29.32318e-5
MA0113.10.666
MA0114.10.174
MA0115.10.668
MA0116.14.28017e-4
MA0117.10.052
MA0119.10.162
MA0122.10.612
MA0124.10.486
MA0125.10.261
MA0131.10.494
MA0135.10.507
MA0136.15.2754e-14
MA0137.22.59538e-12
MA0138.20.317
MA0139.10.983
MA0140.10.329
MA0141.10.156
MA0142.10.724
MA0143.10.902
MA0144.11.61987e-5
MA0145.10.406
MA0146.10.41
MA0147.10.292
MA0148.10.982
MA0149.10.217
MA0150.18.75409e-22
MA0152.10.766
MA0153.10.00555
MA0154.15.34962e-4
MA0155.10.976
MA0156.11.02661e-10
MA0157.10.873
MA0159.10.0232
MA0160.10.0463
MA0162.10.932
MA0163.15.16864e-8
MA0164.10.713
MA0258.10.0112
MA0259.10.977



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13543

Novel motifP-value
10.0893
100.0242
1000.987
1010.839
1020.928
1030.248
1040.526
1050.165
1060.00224
1070.318
1080.763
1090.245
110.162
1100.132
1110.0825
1120.351
1130.599
1140.0202
1150.19
1160.867
1170.0775
1180.209
1190.169
120.309
1200.33
1210.541
1220.554
1230.684
1240.85
1250.322
1260.25
1270.482
1280.0633
1290.383
130.0797
1300.348
1310.997
1320.0643
1330.611
1340.648
1350.494
1360.997
1370.0208
1380.277
1390.091
140.533
1400.564
1410.219
1420.098
1430.032
1440.619
1450.354
1460.9
1470.697
1480.0187
1490.997
150.145
1500.384
1510.482
1520.4
1530.889
1540.776
1550.808
1560.512
1570.815
1580.0853
1590.114
160.299
1600.396
1610.464
1620.217
1630.136
1640.15
1650.224
1660.745
1670.236
1680.126
1690.00949
170.267
180.145
190.438
20.528
200.23
210.705
220.298
230.0448
240.314
250.361
260.0762
270.68
280.44
290.234
30.146
300.483
310.804
320.528
330.206
340.741
350.147
360.0668
370.0695
380.387
390.842
40.877
400.201
410.0174
420.347
430.0273
440.776
450.835
460.19
470.543
480.476
490.173
50.254
500.927
510.491
520.461
530.642
540.432
550.616
560.705
570.877
580.171
590.306
60.83
600.0547
610.732
620.0778
630.548
640.42
650.259
660.31
670.484
680.861
690.343
70.218
700.0461
710.0318
720.2
730.204
740.0719
750.127
760.176
770.557
780.152
790.986
80.405
800.149
810.375
820.249
830.0153
840.321
850.0479
860.0729
870.417
880.672
890.175
90.376
900.0971
910.315
920.303
930.354
940.0858
950.379
960.591
970.636
980.109
990.0602



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13543


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000628 (Bacillus Calmette-Guerin treatment sample)
0011103 (human CD14-positive monocytes - treated with BCG sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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