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(Created page with "{{f5samples |id=FF:11885-125D4 |name=CD14+ monocytes - treated with lipopolysaccharide, donor3 |sample_id=11885 |rna_tube_id= |rna_box=125 |rna_position=D4 |sample_cell...")
 
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{{f5samples
{{f5samples
|id=FF:11885-125D4
|DRA_sample_Accession=CAGE@SAMD00004980
|name=CD14+ monocytes - treated with lipopolysaccharide, donor3
|accession_numbers=CAGE;DRX008161;DRR009033;DRZ000458;DRZ001843;DRZ011808;DRZ013193
|sample_id=11885
|ancestors_in_anatomy_facet=
|rna_tube_id=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057
|rna_box=125
|rna_position=D4
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=D5-6
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=donor3
|sample_sex=female
|sample_age=21
|sample_ethnicity=
|rna_rin=8.90000
|rna_od260/230=0.96000
|rna_od260/280=1.95000
|sample_cell_type=monocyte
|sample_cell_line=
|sample_collaboration=Christine Wells (University of Queensland)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=1.66743
|rna_concentration=0.37054
|sample_note=
|profile_hcage=CNhs13545,,,LIBRARY SCHEDULED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000335,FF:0011108
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.84!6905.53!PLEK;;chr7:115670804..115670825,-!p1@TFEC!3.06!1155.09!TFEC;;chr11:47400078..47400106,-!p1@SPI1!2.84!684.82!SPI1;;chr16:85932760..85932775,+!p1@IRF8!2.64!438.93!IRF8;;chr3:101546827..101546847,+!p2@NFKBIZ!2.36!317.41!NFKBIZ;;chr10:104155659..104155676,+!p4@NFKB2!2.21!200.00!NFKB2;;chr14:35872453..35872485,-!p2@NFKBIA!2.20!370.58!NFKBIA;;chr10:51572408..51572454,+!p3@NCOA4!2.18!831.35!NCOA4;;chr11:47400062..47400077,-!p2@SPI1!2.17!147.79!SPI1;;chr2:192015701..192015743,-!p1@STAT4!2.16!192.73!STAT4;;chr2:68592394..68592405,+!p2@PLEK!2.13!133.55!PLEK;;chr14:35873947..35873965,-!p1@NFKBIA!2.06!6621.66!NFKBIA;;chr2:70142232..70142251,+!p1@MXD1!2.05!589.25!MXD1;;chr12:72056800..72056834,+!p1@THAP2!2.04!145.26!THAP2;;chr20:39317868..39317884,-!p1@MAFB!2.02!1139.26!MAFB;;chr11:47399947..47399961,-!p3@SPI1!2.02!104.12!SPI1;;chr6:106534192..106534224,+!p1@PRDM1!2.00!267.73!PRDM1;;chr21:30671690..30671762,+!p2@BACH1!1.99!313.30!BACH1;;chr10:31288398..31288455,-!p2@ZNF438!1.99!111.39!ZNF438;;chr10:64018918..64018936,+!p2@ZNF365!1.96!91.14!ZNF365;;chr16:31885093..31885165,+!p1@ZNF267!1.94!1241.17!ZNF267;;chr12:54778471..54778528,-!p1@ZNF385A!1.94!85.13!ZNF385A;;chr21:34442439..34442455,+!p1@OLIG1!1.94!85.13!OLIG1;;chr21:30673091..30673135,+!p7@BACH1!1.93!84.81!BACH1;;chr2:145277640..145277771,-!p1@ZEB2!1.92!1022.81!ZEB2;;chr2:61108695..61108753,+!p1@REL!1.91!516.47!REL;;chr1:38325227..38325246,-!p2@MTF1!1.91!108.23!MTF1;;chr4:103422499..103422632,+!p1@NFKB1!1.89!1483.58!NFKB1;;chr6:126240380..126240430,+!p2@NCOA7!1.89!191.14!NCOA7;;chr10:64576105..64576133,-!p1@EGR2!1.86!142.09!EGR2;;chr5:142782823..142782854,-!p3@NR3C1!1.84!96.84!NR3C1;;chr12:72056749..72056767,+!p6@THAP2!1.84!75.95!THAP2;;chr19:45971246..45971265,+!p1@FOSB!1.83!1157.94!FOSB;;chr10:104155480..104155534,+!p2@NFKB2!1.83!413.62!NFKB2;;chr11:47400032..47400043,-!p5@SPI1!1.82!65.19!SPI1;;chr10:51572339..51572376,+!p4@NCOA4!1.81!138.93!NCOA4;;chr3:101568349..101568365,+!p1@NFKBIZ!1.80!3029.49!NFKBIZ;;chr2:145275162..145275202,-!p2@ZEB2!1.80!345.58!ZEB2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.79!708.24!ZC3H12A;;chrX:153305787..153305807,-!p3@MECP2!1.79!60.44!MECP2;;chr18:77155922..77155939,+!p1@NFATC1!1.77!151.90!NFATC1;;chr7:50344289..50344323,+!p1@IKZF1!1.77!57.91!IKZF1;;chr12:72056773..72056796,+!p3@THAP2!1.76!73.10!THAP2;;chr7:115670792..115670797,-!p2@TFEC!1.73!52.22!TFEC;;chr21:30671235..30671253,+!p1@BACH1!1.71!600.33!BACH1;;chr11:615942..615957,-!p1@IRF7!1.70!436.09!IRF7;;chr10:104154246..104154347,+!p3@NFKB2!1.70!283.55!NFKB2;;chr11:65430554..65430579,-!p3@RELA!1.69!118.67!RELA;;chr8:123793988..123794016,+!p1@ZHX2!1.69!81.96!ZHX2;;chr6:106534230..106534254,+!p2@PRDM1!1.67!110.76!PRDM1;;chr10:31288370..31288393,-!p3@ZNF438!1.67!46.20!ZNF438;;chr11:47399996..47400014,-!p4@SPI1!1.67!45.25!SPI1;;chr14:35872494..35872511,-!p5@NFKBIA!1.64!55.38!NFKBIA;;chr2:68615063..68615089,+!p4@PLEK!1.64!42.72!PLEK;;chr6:12012170..12012245,+!p1@HIVEP1!1.63!200.32!HIVEP1;;chr9:102584262..102584276,+!p1@NR4A3!1.63!90.51!NR4A3;;chr2:61108808..61108821,+!p3@REL!1.63!52.22!REL;;chr13:41635029..41635044,-!p4@ELF1!1.62!83.23!ELF1;;chr8:81397820..81397836,+!p2@ZBTB10!1.62!50.00!ZBTB10;;chr21:30672433..30672464,+!p6@BACH1!1.61!39.87!BACH1;;chr1:157108130..157108173,-!p1@ETV3!1.60!267.09!ETV3;;chr11:47400045..47400060,-!p6@SPI1!1.60!38.92!SPI1;;chr1:212782094..212782109,+!p1@ATF3!1.59!980.40!ATF3;;chr6:126240442..126240459,+!p4@NCOA7!1.59!48.42!NCOA7;;chr6:144385698..144385742,-!p2@PLAGL1!1.59!45.25!PLAGL1;;chr13:41593425..41593480,-!p1@ELF1!1.58!225.00!ELF1;;chr19:36391434..36391450,-!p1@NFKBID!1.58!71.20!NFKBID;;chr10:35484053..35484076,+!p1@CREM!1.57!87.34!CREM;;chr2:231090471..231090504,+!p2@SP140!1.57!36.39!SP140;;chr6:12012249..12012266,+!p5@HIVEP1!1.56!60.76!HIVEP1;;chr6:44233252..44233296,-!p1@NFKBIE!1.55!326.59!NFKBIE;;chr4:81104895..81104920,+!p2@PRDM8!1.55!50.63!PRDM8;;chr22:38597987..38598021,+!p2@MAFF!1.54!199.69!MAFF;;chr2:231084639..231084654,-!p2@SP110!1.54!55.06!SP110;;chr19:50432132..50432217,+!p2@ATF5!1.54!39.56!ATF5;;chr9:129567282..129567353,+!p1@ZBTB43!1.53!412.03!ZBTB43;;chr14:35872962..35873025,-!p3@NFKBIA!1.53!80.38!NFKBIA;;chr9:102584159..102584174,+!p2@NR4A3!1.53!58.23!NR4A3;;chr10:104155680..104155687,+!p6@NFKB2!1.52!31.96!NFKB2;;chr4:103446567..103446592,+!p15@NFKB1!1.50!30.70!NFKB1;;chr4:103423079..103423112,+!p4@NFKB1!1.50!30.38!NFKB1;;chr4:106068026..106068084,+!p1@TET2!1.47!248.11!TET2;;chr9:102584128..102584144,+!p3@NR4A3!1.47!53.80!NR4A3;;chr2:61108771..61108789,+!p4@REL!1.47!43.04!REL;;chr2:231090433..231090469,+!p1@SP140!1.47!28.80!SP140;;chr2:145277882..145277967,-!p3@ZEB2!1.46!46.84!ZEB2;;chr4:103446513..103446530,+!p19@NFKB1!1.46!27.85!NFKB1;;chr6:391743..391759,+!p1@IRF4!1.44!26.27!IRF4;;chr5:131826457..131826514,-!p1@IRF1!1.43!979.13!IRF1;;chr7:17338266..17338282,+!p1@AHR!1.43!267.09!AHR;;chr6:15246200..15246214,+!p2@JARID2!1.43!70.25!JARID2;;chr6:126240463..12624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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 67: Line 41:
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|fonse_treatment=EFO:0000369,FF:0000335,FF:0000625,FF:0011108,FF:11885-125D4
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|fonse_treatment_closure=EFO:0000369,FF:0000335,FF:0000625,FF:0011108,FF:11885-125D4
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor3.CNhs13545.11885-125D4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor3.CNhs13545.11885-125D4.hg19.ctss.bed.gz
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|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor3.CNhs13545.11885-125D4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520lipopolysaccharide%252c%2520donor3.CNhs13545.11885-125D4.hg38.nobarcode.ctss.bed.gz
|id=FF:11885-125D4
|is_a=EFO:0002091;;FF:0011108
|is_obsolete=
|library_id=CNhs13545
|library_id_phase_based=2:CNhs13545
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11885
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11885
|name=CD14+ monocytes - treated with lipopolysaccharide, donor3
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.37054
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=D5-6
|rna_od260/230=0.96
|rna_od260/280=1.95
|rna_position=D4
|rna_rin=8.9
|rna_sample_type=total RNA
|rna_tube_id=125D4
|rna_weight_ug=1.66743
|sample_age=21
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=monocyte
|sample_collaboration=Christine Wells (University of Queensland)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor3
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.75099743040971e-276!GO:0005737;cytoplasm;6.89199271806218e-126!GO:0043227;membrane-bound organelle;1.84289707022382e-111!GO:0043231;intracellular membrane-bound organelle;3.79656977891567e-111!GO:0043226;organelle;9.0931700213276e-104!GO:0043229;intracellular organelle;5.28190823112755e-103!GO:0044444;cytoplasmic part;2.16065717909319e-80!GO:0005515;protein binding;3.08353260597541e-72!GO:0044422;organelle part;5.88509441157675e-69!GO:0044446;intracellular organelle part;2.07550294701376e-67!GO:0044237;cellular metabolic process;3.47831879027414e-64!GO:0044238;primary metabolic process;7.69889975445207e-63!GO:0032991;macromolecular complex;5.43100941255027e-61!GO:0043170;macromolecule metabolic process;3.30992425117298e-60!GO:0003723;RNA binding;1.56333394606631e-57!GO:0030529;ribonucleoprotein complex;8.48662505992929e-54!GO:0044428;nuclear part;1.1364417380393e-47!GO:0019538;protein metabolic process;3.74480781380204e-47!GO:0005634;nucleus;4.33366023382931e-45!GO:0006412;translation;8.16808008710051e-45!GO:0044267;cellular protein metabolic process;7.18020658824753e-44!GO:0044260;cellular macromolecule metabolic process;1.59656961374957e-43!GO:0033036;macromolecule localization;9.99014554961315e-42!GO:0015031;protein transport;1.81957453785927e-40!GO:0045184;establishment of protein localization;1.96042573966309e-40!GO:0043233;organelle lumen;2.36772577935358e-39!GO:0031974;membrane-enclosed lumen;2.36772577935358e-39!GO:0008104;protein localization;9.76731540101804e-39!GO:0005829;cytosol;7.37069407285023e-37!GO:0006915;apoptosis;1.3714292297033e-35!GO:0012501;programmed cell death;1.83741316711584e-35!GO:0008219;cell death;2.34699634110783e-33!GO:0016265;death;2.34699634110783e-33!GO:0009059;macromolecule biosynthetic process;6.93272966357427e-33!GO:0016071;mRNA metabolic process;3.05991514150063e-32!GO:0006396;RNA processing;3.30933450515949e-32!GO:0044249;cellular biosynthetic process;4.54445190068989e-32!GO:0009058;biosynthetic process;4.54445190068989e-32!GO:0043283;biopolymer metabolic process;5.61144522496275e-32!GO:0010467;gene expression;3.54597544609271e-31!GO:0031090;organelle membrane;5.42308142923848e-31!GO:0043234;protein complex;1.03873937539256e-30!GO:0031981;nuclear lumen;5.51703240744713e-30!GO:0005840;ribosome;1.68386630313471e-28!GO:0008380;RNA splicing;3.20043695369812e-28!GO:0005739;mitochondrion;3.20043695369812e-28!GO:0006886;intracellular protein transport;1.05489416237704e-27!GO:0046907;intracellular transport;1.76934849272379e-27!GO:0006397;mRNA processing;2.76587900802674e-27!GO:0016043;cellular component organization and biogenesis;3.39057644262049e-27!GO:0003735;structural constituent of ribosome;2.69855537170827e-26!GO:0033279;ribosomal subunit;4.31015525246846e-25!GO:0031967;organelle envelope;5.32957018360724e-25!GO:0031975;envelope;1.0115736372943e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.08062802334819e-24!GO:0042981;regulation of apoptosis;2.10503588002875e-23!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.44323731240866e-23!GO:0043067;regulation of programmed cell death;5.55090608754398e-23!GO:0044445;cytosolic part;1.27120006074745e-22!GO:0005681;spliceosome;1.06354994916306e-21!GO:0051649;establishment of cellular localization;1.22723324874437e-21!GO:0065003;macromolecular complex assembly;1.81152006499618e-21!GO:0000166;nucleotide binding;4.47892068965444e-21!GO:0051641;cellular localization;5.43701693774225e-21!GO:0002376;immune system process;7.47066545722821e-21!GO:0044429;mitochondrial part;8.16322582225906e-21!GO:0005654;nucleoplasm;1.32743853794639e-20!GO:0008134;transcription factor binding;6.67040255835572e-20!GO:0007243;protein kinase cascade;8.45461821857349e-20!GO:0022607;cellular component assembly;1.00918640495626e-17!GO:0006955;immune response;2.34144146143567e-17!GO:0048523;negative regulation of cellular process;3.68798582386157e-17!GO:0044265;cellular macromolecule catabolic process;4.0899948801315e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.76840475588645e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.92743253337917e-17!GO:0016462;pyrophosphatase activity;6.14559395640728e-17!GO:0006119;oxidative phosphorylation;6.8591077047028e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;8.72682874301075e-17!GO:0044451;nucleoplasm part;8.7675963721503e-17!GO:0017111;nucleoside-triphosphatase activity;1.26890321690521e-16!GO:0006512;ubiquitin cycle;1.30552142089327e-16!GO:0043285;biopolymer catabolic process;1.97766653931747e-16!GO:0016192;vesicle-mediated transport;2.10900407439219e-16!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.39324944991482e-16!GO:0048770;pigment granule;3.63515551527513e-16!GO:0042470;melanosome;3.63515551527513e-16!GO:0005740;mitochondrial envelope;1.90380430097507e-15!GO:0032553;ribonucleotide binding;2.060250299225e-15!GO:0032555;purine ribonucleotide binding;2.060250299225e-15!GO:0048519;negative regulation of biological process;2.40396408849294e-15!GO:0009057;macromolecule catabolic process;4.12244456824143e-15!GO:0031966;mitochondrial membrane;4.43218093132337e-15!GO:0006605;protein targeting;5.0091738249592e-15!GO:0017076;purine nucleotide binding;5.37205502995306e-15!GO:0043412;biopolymer modification;6.7821982860817e-15!GO:0009615;response to virus;9.06493625270372e-15!GO:0007242;intracellular signaling cascade;9.28042223617886e-15!GO:0022618;protein-RNA complex assembly;9.89836670993534e-15!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.24748367553173e-14!GO:0019866;organelle inner membrane;2.27666153350638e-14!GO:0019941;modification-dependent protein catabolic process;2.70621090892397e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.70621090892397e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;3.54517027120455e-14!GO:0044257;cellular protein catabolic process;4.7906907103769e-14!GO:0043069;negative regulation of programmed cell death;5.50445781928167e-14!GO:0006511;ubiquitin-dependent protein catabolic process;6.54985927246789e-14!GO:0005773;vacuole;6.81622015020051e-14!GO:0043066;negative regulation of apoptosis;6.94531546709057e-14!GO:0006950;response to stress;8.00924807116984e-14!GO:0006464;protein modification process;9.27786093801975e-14!GO:0016604;nuclear body;1.29197483670332e-13!GO:0050794;regulation of cellular process;1.69294623946527e-13!GO:0015934;large ribosomal subunit;1.79050096506546e-13!GO:0043687;post-translational protein modification;1.92298932633565e-13!GO:0000502;proteasome complex (sensu Eukaryota);2.04217136961455e-13!GO:0003676;nucleic acid binding;2.05173113438352e-13!GO:0051246;regulation of protein metabolic process;2.189099832546e-13!GO:0044248;cellular catabolic process;2.23040982927111e-13!GO:0048522;positive regulation of cellular process;3.16275377809888e-13!GO:0006913;nucleocytoplasmic transport;3.85146463694234e-13!GO:0016874;ligase activity;5.71484693256857e-13!GO:0051169;nuclear transport;6.98712203896716e-13!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.58164017074667e-13!GO:0006996;organelle organization and biogenesis;7.66228419333905e-13!GO:0030163;protein catabolic process;8.79190628839152e-13!GO:0065009;regulation of a molecular function;9.57581589389013e-13!GO:0015935;small ribosomal subunit;9.82428009698602e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.28804670398959e-12!GO:0016070;RNA metabolic process;1.60958541264939e-12!GO:0008135;translation factor activity, nucleic acid binding;2.97571496583489e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.0115207223994e-12!GO:0000323;lytic vacuole;3.33655522148269e-12!GO:0005764;lysosome;3.33655522148269e-12!GO:0003712;transcription cofactor activity;4.35357006067982e-12!GO:0016607;nuclear speck;4.72625563333832e-12!GO:0044455;mitochondrial membrane part;4.9051373029253e-12!GO:0048518;positive regulation of biological process;5.69526387549947e-12!GO:0006793;phosphorus metabolic process;6.40616195360468e-12!GO:0006796;phosphate metabolic process;6.40616195360468e-12!GO:0009607;response to biotic stimulus;7.11808664995862e-12!GO:0005743;mitochondrial inner membrane;8.47188629162513e-12!GO:0005768;endosome;1.14004577039979e-11!GO:0006916;anti-apoptosis;1.25301665334983e-11!GO:0006457;protein folding;1.706003724481e-11!GO:0012505;endomembrane system;2.8648355041796e-11!GO:0009967;positive regulation of signal transduction;3.4539690099537e-11!GO:0006259;DNA metabolic process;3.91980151537997e-11!GO:0003743;translation initiation factor activity;4.17405098822763e-11!GO:0006366;transcription from RNA polymerase II promoter;5.0719378859436e-11!GO:0005794;Golgi apparatus;9.14543294452424e-11!GO:0006417;regulation of translation;1.00567955597038e-10!GO:0016787;hydrolase activity;1.03660392908232e-10!GO:0050789;regulation of biological process;1.05859187858247e-10!GO:0043065;positive regulation of apoptosis;1.33857315663646e-10!GO:0051186;cofactor metabolic process;1.50511157594104e-10!GO:0006413;translational initiation;1.61139552760079e-10!GO:0016310;phosphorylation;2.22424532194153e-10!GO:0005524;ATP binding;2.37558814175587e-10!GO:0043068;positive regulation of programmed cell death;2.53398808434859e-10!GO:0032559;adenyl ribonucleotide binding;2.87825310048663e-10!GO:0005730;nucleolus;3.07128614662525e-10!GO:0048468;cell development;3.90344436954874e-10!GO:0051082;unfolded protein binding;6.78294169343914e-10!GO:0005635;nuclear envelope;6.83962112504455e-10!GO:0030554;adenyl nucleotide binding;7.36060378646444e-10!GO:0006446;regulation of translational initiation;9.26715112484247e-10!GO:0005746;mitochondrial respiratory chain;1.05716184928105e-09!GO:0006732;coenzyme metabolic process;1.34065268871282e-09!GO:0008639;small protein conjugating enzyme activity;1.74545095485995e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.75836699984889e-09!GO:0009889;regulation of biosynthetic process;1.86739670643819e-09!GO:0065007;biological regulation;1.92304695264028e-09!GO:0004842;ubiquitin-protein ligase activity;2.38256957748933e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.60702586270969e-09!GO:0050790;regulation of catalytic activity;2.63002290485987e-09!GO:0009056;catabolic process;2.93353281244852e-09!GO:0017038;protein import;3.02148930902744e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.31145979124506e-09!GO:0000375;RNA splicing, via transesterification reactions;3.31145979124506e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.31145979124506e-09!GO:0019787;small conjugating protein ligase activity;3.73096381149941e-09!GO:0051726;regulation of cell cycle;4.58423957968936e-09!GO:0000074;regulation of progression through cell cycle;4.63572034792111e-09!GO:0050136;NADH dehydrogenase (quinone) activity;4.63572034792111e-09!GO:0003954;NADH dehydrogenase activity;4.63572034792111e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.63572034792111e-09!GO:0007049;cell cycle;4.926341104293e-09!GO:0031326;regulation of cellular biosynthetic process;4.9399369585097e-09!GO:0006917;induction of apoptosis;5.41992561251072e-09!GO:0031324;negative regulation of cellular metabolic process;5.95560819480238e-09!GO:0006164;purine nucleotide biosynthetic process;6.32077520309141e-09!GO:0006163;purine nucleotide metabolic process;6.34087093224365e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.34087093224365e-09!GO:0019829;cation-transporting ATPase activity;6.34087093224365e-09!GO:0015986;ATP synthesis coupled proton transport;9.52875959133133e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.52875959133133e-09!GO:0012502;induction of programmed cell death;9.52875959133133e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.54716055083113e-08!GO:0009150;purine ribonucleotide metabolic process;1.63961827000424e-08!GO:0016887;ATPase activity;1.75249352637841e-08!GO:0042623;ATPase activity, coupled;1.8248102762968e-08!GO:0009259;ribonucleotide metabolic process;2.00942355090735e-08!GO:0051170;nuclear import;2.2276391526175e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.63632577385365e-08!GO:0009055;electron carrier activity;2.71885951548995e-08!GO:0005770;late endosome;3.41077791429709e-08!GO:0031965;nuclear membrane;3.74522552917527e-08!GO:0044453;nuclear membrane part;4.06565397925916e-08!GO:0005525;GTP binding;4.4406321685511e-08!GO:0009260;ribonucleotide biosynthetic process;4.4406321685511e-08!GO:0006606;protein import into nucleus;5.50190631614213e-08!GO:0005783;endoplasmic reticulum;5.75629766823228e-08!GO:0048193;Golgi vesicle transport;6.27157547851787e-08!GO:0042775;organelle ATP synthesis coupled electron transport;7.16201591224813e-08!GO:0042773;ATP synthesis coupled electron transport;7.16201591224813e-08!GO:0043228;non-membrane-bound organelle;7.27654796928883e-08!GO:0043232;intracellular non-membrane-bound organelle;7.27654796928883e-08!GO:0006754;ATP biosynthetic process;9.51111449975962e-08!GO:0006753;nucleoside phosphate metabolic process;9.51111449975962e-08!GO:0016564;transcription repressor activity;9.72213239847511e-08!GO:0003924;GTPase activity;1.06895286108784e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.21255087426949e-07!GO:0045786;negative regulation of progression through cell cycle;1.30546515628181e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.59565927761921e-07!GO:0045271;respiratory chain complex I;1.59565927761921e-07!GO:0005747;mitochondrial respiratory chain complex I;1.59565927761921e-07!GO:0009892;negative regulation of metabolic process;1.65609368110862e-07!GO:0009108;coenzyme biosynthetic process;1.91046915351894e-07!GO:0051188;cofactor biosynthetic process;1.94541266049779e-07!GO:0004386;helicase activity;2.43323593661453e-07!GO:0050657;nucleic acid transport;2.65271639616579e-07!GO:0051236;establishment of RNA localization;2.65271639616579e-07!GO:0050658;RNA transport;2.65271639616579e-07!GO:0019899;enzyme binding;2.81311418322339e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.83947563652828e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.29947436357931e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.29947436357931e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.41103683937028e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.6100180567205e-07!GO:0006403;RNA localization;4.03901152295668e-07!GO:0046034;ATP metabolic process;4.08931823231571e-07!GO:0003713;transcription coactivator activity;4.15054743161372e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.15054743161372e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.15054743161372e-07!GO:0016881;acid-amino acid ligase activity;4.21001301973366e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.2408623687037e-07!GO:0005774;vacuolar membrane;5.53334246708509e-07!GO:0009966;regulation of signal transduction;5.71049564190019e-07!GO:0008026;ATP-dependent helicase activity;5.76944944342095e-07!GO:0031980;mitochondrial lumen;5.78030355514329e-07!GO:0005759;mitochondrial matrix;5.78030355514329e-07!GO:0006954;inflammatory response;6.23488148871498e-07!GO:0008565;protein transporter activity;6.58665518254948e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.03846694702103e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.03846694702103e-07!GO:0006461;protein complex assembly;7.80090132008411e-07!GO:0006752;group transfer coenzyme metabolic process;8.3442472518199e-07!GO:0009199;ribonucleoside triphosphate metabolic process;8.37679112330798e-07!GO:0007264;small GTPase mediated signal transduction;9.31818563987478e-07!GO:0032561;guanyl ribonucleotide binding;9.75541402573559e-07!GO:0019001;guanyl nucleotide binding;9.75541402573559e-07!GO:0051707;response to other organism;1.22711569207856e-06!GO:0008047;enzyme activator activity;1.38065917153704e-06!GO:0045321;leukocyte activation;1.44010025425606e-06!GO:0016044;membrane organization and biogenesis;1.47819756608761e-06!GO:0005643;nuclear pore;1.62851580990061e-06!GO:0044440;endosomal part;1.73183763729429e-06!GO:0010008;endosome membrane;1.73183763729429e-06!GO:0022402;cell cycle process;1.85458966818752e-06!GO:0006974;response to DNA damage stimulus;2.09244942628655e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.09244942628655e-06!GO:0009141;nucleoside triphosphate metabolic process;2.09244942628655e-06!GO:0001816;cytokine production;2.10768189413289e-06!GO:0016481;negative regulation of transcription;2.13025805578347e-06!GO:0044437;vacuolar part;2.47984088532787e-06!GO:0006952;defense response;2.89916292136719e-06!GO:0005793;ER-Golgi intermediate compartment;3.00979182987302e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.1471079853131e-06!GO:0051028;mRNA transport;3.22361613468175e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.63868773812947e-06!GO:0005765;lysosomal membrane;4.12072806015568e-06!GO:0044432;endoplasmic reticulum part;4.66464316588402e-06!GO:0019222;regulation of metabolic process;5.11685515580637e-06!GO:0004298;threonine endopeptidase activity;5.50939068144098e-06!GO:0051789;response to protein stimulus;5.56766044398401e-06!GO:0006986;response to unfolded protein;5.56766044398401e-06!GO:0032446;protein modification by small protein conjugation;7.43380672418673e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;8.13134430163374e-06!GO:0008632;apoptotic program;1.00105787332312e-05!GO:0016563;transcription activator activity;1.00894747933898e-05!GO:0016567;protein ubiquitination;1.20556348598132e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.21353013515764e-05!GO:0003714;transcription corepressor activity;1.28064228385189e-05!GO:0006401;RNA catabolic process;1.50440947406325e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.51506316473961e-05!GO:0031982;vesicle;1.51851115462277e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.52527696842834e-05!GO:0015399;primary active transmembrane transporter activity;1.52527696842834e-05!GO:0051338;regulation of transferase activity;1.55531404810035e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.70771485767151e-05!GO:0016197;endosome transport;1.72868408534798e-05!GO:0006323;DNA packaging;1.83105829599487e-05!GO:0030099;myeloid cell differentiation;1.84196892892899e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.09726513133255e-05!GO:0065002;intracellular protein transport across a membrane;2.1571109770619e-05!GO:0030097;hemopoiesis;2.26387632925891e-05!GO:0043549;regulation of kinase activity;2.48332005608197e-05!GO:0043566;structure-specific DNA binding;2.67370272908539e-05!GO:0046649;lymphocyte activation;2.84882989526647e-05!GO:0046930;pore complex;2.93096045792287e-05!GO:0009893;positive regulation of metabolic process;2.98453084699405e-05!GO:0031252;leading edge;3.03076483642079e-05!GO:0006281;DNA repair;3.34200246693282e-05!GO:0003724;RNA helicase activity;3.7980092567226e-05!GO:0048475;coated membrane;4.20946606645098e-05!GO:0030117;membrane coat;4.20946606645098e-05!GO:0045859;regulation of protein kinase activity;4.22753878738338e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.44182757713007e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.94999867768774e-05!GO:0006888;ER to Golgi vesicle-mediated transport;5.1508152879713e-05!GO:0005769;early endosome;5.33433006596412e-05!GO:0006402;mRNA catabolic process;6.86538411277424e-05!GO:0001775;cell activation;7.09676066317479e-05!GO:0006613;cotranslational protein targeting to membrane;7.22902220099509e-05!GO:0005789;endoplasmic reticulum membrane;7.37191567915159e-05!GO:0007050;cell cycle arrest;7.8584933320628e-05!GO:0030120;vesicle coat;8.32309034218997e-05!GO:0030662;coated vesicle membrane;8.32309034218997e-05!GO:0031410;cytoplasmic vesicle;8.65534527717612e-05!GO:0016568;chromatin modification;9.8829595366093e-05!GO:0006897;endocytosis;0.000102574428999915!GO:0010324;membrane invagination;0.000102574428999915!GO:0042110;T cell activation;0.000102574428999915!GO:0051168;nuclear export;0.00010380855109793!GO:0003697;single-stranded DNA binding;0.000105130815651162!GO:0031988;membrane-bound vesicle;0.000115582968571492!GO:0009060;aerobic respiration;0.000117732465575835!GO:0031902;late endosome membrane;0.000119510019720711!GO:0008234;cysteine-type peptidase activity;0.000121262946419661!GO:0045259;proton-transporting ATP synthase complex;0.000127489558417789!GO:0051336;regulation of hydrolase activity;0.000130427921945462!GO:0005761;mitochondrial ribosome;0.000139286703908915!GO:0000313;organellar ribosome;0.000139286703908915!GO:0009117;nucleotide metabolic process;0.000142671438203033!GO:0002521;leukocyte differentiation;0.000154812762366426!GO:0051276;chromosome organization and biogenesis;0.00016452636079893!GO:0030532;small nuclear ribonucleoprotein complex;0.00016452636079893!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000180215636742253!GO:0042254;ribosome biogenesis and assembly;0.000181960390510687!GO:0022890;inorganic cation transmembrane transporter activity;0.000182846495576502!GO:0046822;regulation of nucleocytoplasmic transport;0.00024431114552188!GO:0043492;ATPase activity, coupled to movement of substances;0.000249721128463003!GO:0030695;GTPase regulator activity;0.000252734190415102!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000266411252296237!GO:0016740;transferase activity;0.00027832390511862!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000313004306113498!GO:0005885;Arp2/3 protein complex;0.000316634909021141!GO:0007041;lysosomal transport;0.00032049757376899!GO:0022415;viral reproductive process;0.000327080289113376!GO:0007005;mitochondrion organization and biogenesis;0.000327195339059327!GO:0009719;response to endogenous stimulus;0.000327195339059327!GO:0051427;hormone receptor binding;0.000330426743120967!GO:0007034;vacuolar transport;0.00034187225890816!GO:0016023;cytoplasmic membrane-bound vesicle;0.000354595135299521!GO:0009611;response to wounding;0.000363402722594326!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000372586630017187!GO:0051223;regulation of protein transport;0.000378547339363521!GO:0031325;positive regulation of cellular metabolic process;0.000388607214787832!GO:0007259;JAK-STAT cascade;0.000388948990281532!GO:0031323;regulation of cellular metabolic process;0.000395417029805426!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000405223273247123!GO:0006818;hydrogen transport;0.000408229373838362!GO:0000245;spliceosome assembly;0.000426122259663902!GO:0002520;immune system development;0.000426122259663902!GO:0045941;positive regulation of transcription;0.000426226375658986!GO:0046519;sphingoid metabolic process;0.000436907965196403!GO:0046983;protein dimerization activity;0.00045387270292298!GO:0006612;protein targeting to membrane;0.000463632543585429!GO:0008654;phospholipid biosynthetic process;0.000466944165290983!GO:0015992;proton transport;0.000475112852715278!GO:0005096;GTPase activator activity;0.000475112852715278!GO:0035257;nuclear hormone receptor binding;0.000491312042393059!GO:0008186;RNA-dependent ATPase activity;0.000508874899869005!GO:0006672;ceramide metabolic process;0.000510913159932435!GO:0048534;hemopoietic or lymphoid organ development;0.000581628494052731!GO:0045333;cellular respiration;0.000581628494052731!GO:0045893;positive regulation of transcription, DNA-dependent;0.000589315534047121!GO:0006399;tRNA metabolic process;0.000611529518594757!GO:0005057;receptor signaling protein activity;0.000615125623381175!GO:0032940;secretion by cell;0.000691260731789259!GO:0002757;immune response-activating signal transduction;0.000694991745923117!GO:0004674;protein serine/threonine kinase activity;0.000703950213589039!GO:0065004;protein-DNA complex assembly;0.000737875981873103!GO:0001726;ruffle;0.000759274456723718!GO:0019221;cytokine and chemokine mediated signaling pathway;0.000847253087220486!GO:0016779;nucleotidyltransferase activity;0.00100248008109163!GO:0006919;caspase activation;0.00102640917199038!GO:0043281;regulation of caspase activity;0.00103152942259482!GO:0044431;Golgi apparatus part;0.00105762351529177!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00107798697749579!GO:0051090;regulation of transcription factor activity;0.00111772832760388!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00115908125812157!GO:0004812;aminoacyl-tRNA ligase activity;0.00115908125812157!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00115908125812157!GO:0045637;regulation of myeloid cell differentiation;0.00117903504890529!GO:0043085;positive regulation of catalytic activity;0.00118315175706573!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0012574967822297!GO:0033157;regulation of intracellular protein transport;0.00137431554574859!GO:0042306;regulation of protein import into nucleus;0.00137431554574859!GO:0004004;ATP-dependent RNA helicase activity;0.00143815814862376!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00145869523239263!GO:0005741;mitochondrial outer membrane;0.00146409411759394!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00159972364412858!GO:0005083;small GTPase regulator activity;0.0016027508249565!GO:0043280;positive regulation of caspase activity;0.00161617530970436!GO:0009165;nucleotide biosynthetic process;0.00164002304931309!GO:0043623;cellular protein complex assembly;0.00164260211942614!GO:0002764;immune response-regulating signal transduction;0.00164260211942614!GO:0007033;vacuole organization and biogenesis;0.00169236408086643!GO:0018193;peptidyl-amino acid modification;0.00171193322295801!GO:0043038;amino acid activation;0.00171970626439432!GO:0006418;tRNA aminoacylation for protein translation;0.00171970626439432!GO:0043039;tRNA aminoacylation;0.00171970626439432!GO:0006643;membrane lipid metabolic process;0.00178874877295021!GO:0045892;negative regulation of transcription, DNA-dependent;0.00181594178635264!GO:0051187;cofactor catabolic process;0.00189973634437302!GO:0005667;transcription factor complex;0.00192218034953762!GO:0001819;positive regulation of cytokine production;0.00195849118247468!GO:0030036;actin cytoskeleton organization and biogenesis;0.0019979194958189!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0019998658468317!GO:0001817;regulation of cytokine production;0.00203642771893742!GO:0002252;immune effector process;0.00208876580302021!GO:0005637;nuclear inner membrane;0.00208959974205136!GO:0005798;Golgi-associated vesicle;0.00209199164306285!GO:0006091;generation of precursor metabolites and energy;0.00209199164306285!GO:0016251;general RNA polymerase II transcription factor activity;0.00214028811596035!GO:0060090;molecular adaptor activity;0.0022327505666189!GO:0003729;mRNA binding;0.00237473585352119!GO:0000151;ubiquitin ligase complex;0.00247366654377141!GO:0007040;lysosome organization and biogenesis;0.00247782102101688!GO:0051059;NF-kappaB binding;0.00250216670411202!GO:0004197;cysteine-type endopeptidase activity;0.00256410012930454!GO:0030149;sphingolipid catabolic process;0.00272457562183812!GO:0006099;tricarboxylic acid cycle;0.002806349312229!GO:0046356;acetyl-CoA catabolic process;0.002806349312229!GO:0002274;myeloid leukocyte activation;0.00281921103128954!GO:0007265;Ras protein signal transduction;0.00291690063517537!GO:0019220;regulation of phosphate metabolic process;0.0029383311655792!GO:0051174;regulation of phosphorus metabolic process;0.0029383311655792!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00313916634234162!GO:0031968;organelle outer membrane;0.00324836192558114!GO:0042990;regulation of transcription factor import into nucleus;0.00344657561956841!GO:0042991;transcription factor import into nucleus;0.00344657561956841!GO:0008383;manganese superoxide dismutase activity;0.00356600199315922!GO:0001315;age-dependent response to reactive oxygen species;0.00356600199315922!GO:0002250;adaptive immune response;0.00365418973135578!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00365418973135578!GO:0016072;rRNA metabolic process;0.00384670776757978!GO:0051247;positive regulation of protein metabolic process;0.00395800388761389!GO:0019867;outer membrane;0.00398526327588031!GO:0046966;thyroid hormone receptor binding;0.00408521432020236!GO:0030218;erythrocyte differentiation;0.00412150792246428!GO:0009891;positive regulation of biosynthetic process;0.00414509659620129!GO:0005813;centrosome;0.00422374309336066!GO:0033116;ER-Golgi intermediate compartment membrane;0.00442667145636391!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00456175011510072!GO:0000278;mitotic cell cycle;0.00464498580347877!GO:0010468;regulation of gene expression;0.00468458951728159!GO:0019904;protein domain specific binding;0.00477388138728181!GO:0042108;positive regulation of cytokine biosynthetic process;0.00477392771493468!GO:0031072;heat shock protein binding;0.0048821915695981!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00499780812497872!GO:0043433;negative regulation of transcription factor activity;0.00501373378319822!GO:0031901;early endosome membrane;0.00515540571735098!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00534031615991295!GO:0042802;identical protein binding;0.00534242066481785!GO:0006364;rRNA processing;0.00541387340557523!GO:0019210;kinase inhibitor activity;0.00546820231806132!GO:0004860;protein kinase inhibitor activity;0.00565266615895021!GO:0033673;negative regulation of kinase activity;0.00574678864129952!GO:0006469;negative regulation of protein kinase activity;0.00574678864129952!GO:0006084;acetyl-CoA metabolic process;0.00584450363436363!GO:0016301;kinase activity;0.00599279911863554!GO:0042107;cytokine metabolic process;0.00599279911863554!GO:0045727;positive regulation of translation;0.00616431521395932!GO:0043087;regulation of GTPase activity;0.00624819748423072!GO:0043021;ribonucleoprotein binding;0.00655431518442771!GO:0019079;viral genome replication;0.00662670851360676!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00664156367052508!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00670372201645159!GO:0045454;cell redox homeostasis;0.00671061352019124!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00674566595645598!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00674566595645598!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00674566595645598!GO:0006935;chemotaxis;0.00723372287026172!GO:0042330;taxis;0.00723372287026172!GO:0009109;coenzyme catabolic process;0.00734551043383621!GO:0008637;apoptotic mitochondrial changes;0.0076209609023374!GO:0008283;cell proliferation;0.00762235366953236!GO:0003690;double-stranded DNA binding;0.00773218328214925!GO:0006611;protein export from nucleus;0.00780519101384852!GO:0002684;positive regulation of immune system process;0.00780519101384852!GO:0006891;intra-Golgi vesicle-mediated transport;0.00780519101384852!GO:0019058;viral infectious cycle;0.00787910175623873!GO:0016791;phosphoric monoester hydrolase activity;0.00816165413734124!GO:0045646;regulation of erythrocyte differentiation;0.00824992855830057!GO:0006333;chromatin assembly or disassembly;0.00849780200639358!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0085006208362055!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0085006208362055!GO:0032386;regulation of intracellular transport;0.0085006208362055!GO:0051348;negative regulation of transferase activity;0.00851990309733251!GO:0042089;cytokine biosynthetic process;0.00867759765691999!GO:0048500;signal recognition particle;0.00881758047996003!GO:0005099;Ras GTPase activator activity;0.0088997880018264!GO:0044262;cellular carbohydrate metabolic process;0.00892625471504356!GO:0033367;protein localization in mast cell secretory granule;0.00920921521822534!GO:0033365;protein localization in organelle;0.00920921521822534!GO:0033371;T cell secretory granule organization and biogenesis;0.00920921521822534!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00920921521822534!GO:0033375;protease localization in T cell secretory granule;0.00920921521822534!GO:0042629;mast cell granule;0.00920921521822534!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00920921521822534!GO:0033364;mast cell secretory granule organization and biogenesis;0.00920921521822534!GO:0033380;granzyme B localization in T cell secretory granule;0.00920921521822534!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00920921521822534!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00920921521822534!GO:0033368;protease localization in mast cell secretory granule;0.00920921521822534!GO:0033366;protein localization in secretory granule;0.00920921521822534!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00920921521822534!GO:0033374;protein localization in T cell secretory granule;0.00920921521822534!GO:0042221;response to chemical stimulus;0.0092839006721639!GO:0002682;regulation of immune system process;0.0096602381230106!GO:0048487;beta-tubulin binding;0.0104877218887528!GO:0051098;regulation of binding;0.0107312684192258!GO:0051251;positive regulation of lymphocyte activation;0.0109078377244957!GO:0000139;Golgi membrane;0.010987310217609!GO:0050778;positive regulation of immune response;0.0114810602914542!GO:0005152;interleukin-1 receptor antagonist activity;0.0119304847783226!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0119304847783226!GO:0048872;homeostasis of number of cells;0.0119304847783226!GO:0006468;protein amino acid phosphorylation;0.0122155845564533!GO:0003725;double-stranded RNA binding;0.0123247338335738!GO:0042325;regulation of phosphorylation;0.0123247338335738!GO:0016363;nuclear matrix;0.0125763748796244!GO:0002440;production of molecular mediator of immune response;0.0126555836343555!GO:0030098;lymphocyte differentiation;0.0126852931483953!GO:0008333;endosome to lysosome transport;0.0127165031890599!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0127384999931105!GO:0050851;antigen receptor-mediated signaling pathway;0.0127444835352551!GO:0030029;actin filament-based process;0.0127444835352551!GO:0019377;glycolipid catabolic process;0.0127444835352551!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0127933544395565!GO:0045047;protein targeting to ER;0.0127933544395565!GO:0032943;mononuclear cell proliferation;0.0132308667160275!GO:0046651;lymphocyte proliferation;0.0132308667160275!GO:0006352;transcription initiation;0.0132333742519954!GO:0005815;microtubule organizing center;0.0133154747800203!GO:0050900;leukocyte migration;0.0133325863173347!GO:0006665;sphingolipid metabolic process;0.0134811359220861!GO:0000209;protein polyubiquitination;0.0135363434689923!GO:0051092;activation of NF-kappaB transcription factor;0.0136173361158336!GO:0004185;serine carboxypeptidase activity;0.0136177966153947!GO:0046631;alpha-beta T cell activation;0.0137517683043087!GO:0000287;magnesium ion binding;0.0138099228685918!GO:0051345;positive regulation of hydrolase activity;0.0143581852391101!GO:0000785;chromatin;0.0143778793778104!GO:0000082;G1/S transition of mitotic cell cycle;0.0143895982453752!GO:0008139;nuclear localization sequence binding;0.0144971093889995!GO:0030217;T cell differentiation;0.0149975560505981!GO:0048471;perinuclear region of cytoplasm;0.01507681312573!GO:0002573;myeloid leukocyte differentiation;0.0150880386989953!GO:0006607;NLS-bearing substrate import into nucleus;0.015463977305738!GO:0030658;transport vesicle membrane;0.0156361662264575!GO:0031625;ubiquitin protein ligase binding;0.0159386028337675!GO:0042088;T-helper 1 type immune response;0.0161049474435248!GO:0030258;lipid modification;0.0161196311189849!GO:0051329;interphase of mitotic cell cycle;0.0162869758511777!GO:0045045;secretory pathway;0.0165856275752238!GO:0030127;COPII vesicle coat;0.016610401585248!GO:0012507;ER to Golgi transport vesicle membrane;0.016610401585248!GO:0051023;regulation of immunoglobulin secretion;0.0167034775179572!GO:0045994;positive regulation of translational initiation by iron;0.0167034775179572!GO:0006260;DNA replication;0.0171483407402034!GO:0005484;SNAP receptor activity;0.0173640370958295!GO:0000165;MAPKKK cascade;0.0174162113068569!GO:0051325;interphase;0.0174958247099553!GO:0042113;B cell activation;0.0175764906267829!GO:0030176;integral to endoplasmic reticulum membrane;0.0183517792111746!GO:0030867;rough endoplasmic reticulum membrane;0.0194134329320922!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0194296260795193!GO:0045792;negative regulation of cell size;0.0196202627270242!GO:0005070;SH3/SH2 adaptor activity;0.0197278712023224!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0198810285900468!GO:0046466;membrane lipid catabolic process;0.0201139965821726!GO:0003727;single-stranded RNA binding;0.0201139965821726!GO:0048146;positive regulation of fibroblast proliferation;0.0201139965821726!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0202362006468633!GO:0006350;transcription;0.0208544507539128!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0208778588717902!GO:0030027;lamellipodium;0.0211633637017656!GO:0042092;T-helper 2 type immune response;0.021177177787876!GO:0008624;induction of apoptosis by extracellular signals;0.0211971471754266!GO:0030693;caspase activity;0.0212934318396899!GO:0050776;regulation of immune response;0.0212934318396899!GO:0019207;kinase regulator activity;0.0214175872879521!GO:0002697;regulation of immune effector process;0.0214562403251245!GO:0002263;cell activation during immune response;0.0214562403251245!GO:0042093;T-helper cell differentiation;0.0214562403251245!GO:0002366;leukocyte activation during immune response;0.0214562403251245!GO:0002293;alpha-beta T cell differentiation during immune response;0.0214562403251245!GO:0002294;CD4-positive, alpha-beta T cell differentiation during immune response;0.0214562403251245!GO:0002285;lymphocyte activation during immune response;0.0214562403251245!GO:0002292;T cell differentiation during immune response;0.0214562403251245!GO:0002286;T cell activation during immune response;0.0214562403251245!GO:0043621;protein self-association;0.0216634896373665!GO:0019882;antigen processing and presentation;0.0220019694282521!GO:0043022;ribosome binding;0.0222479161146548!GO:0045089;positive regulation of innate immune response;0.0222740731931337!GO:0045088;regulation of innate immune response;0.0222740731931337!GO:0002467;germinal center formation;0.0222789750415048!GO:0042035;regulation of cytokine biosynthetic process;0.0223564024273306!GO:0030521;androgen receptor signaling pathway;0.0224064321206844!GO:0045639;positive regulation of myeloid cell differentiation;0.0227241138011896!GO:0030041;actin filament polymerization;0.0229516466792626!GO:0050870;positive regulation of T cell activation;0.0230651624804869!GO:0031328;positive regulation of cellular biosynthetic process;0.0230801711531881!GO:0030308;negative regulation of cell growth;0.0230949639126087!GO:0006458;'de novo' protein folding;0.0232721851749444!GO:0051084;'de novo' posttranslational protein folding;0.0232721851749444!GO:0008312;7S RNA binding;0.0233889173979431!GO:0050811;GABA receptor binding;0.0242938538709328!GO:0045746;negative regulation of Notch signaling pathway;0.0242938538709328!GO:0051051;negative regulation of transport;0.024300112127931!GO:0002237;response to molecule of bacterial origin;0.0245852746590033!GO:0046479;glycosphingolipid catabolic process;0.0250586063639913!GO:0030384;phosphoinositide metabolic process;0.0250586063639913!GO:0000049;tRNA binding;0.025486395444146!GO:0005048;signal sequence binding;0.025486395444146!GO:0001776;leukocyte homeostasis;0.0255043821555306!GO:0019883;antigen processing and presentation of endogenous antigen;0.0258569765906621!GO:0030155;regulation of cell adhesion;0.0259844558719827!GO:0051049;regulation of transport;0.0259844558719827!GO:0032763;regulation of mast cell cytokine production;0.026077203483228!GO:0032762;mast cell cytokine production;0.026077203483228!GO:0002224;toll-like receptor signaling pathway;0.0260851399870158!GO:0002221;pattern recognition receptor signaling pathway;0.0260851399870158!GO:0006414;translational elongation;0.0261030538427226!GO:0046467;membrane lipid biosynthetic process;0.0261030538427226!GO:0042613;MHC class II protein complex;0.0263949671161927!GO:0051252;regulation of RNA metabolic process;0.0265725095887427!GO:0015631;tubulin binding;0.0271526262140167!GO:0005149;interleukin-1 receptor binding;0.0276066784172651!GO:0030503;regulation of cell redox homeostasis;0.0276432050769897!GO:0006650;glycerophospholipid metabolic process;0.0278793925865203!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0280494605349413!GO:0002819;regulation of adaptive immune response;0.0280494605349413!GO:0003702;RNA polymerase II transcription factor activity;0.0282405325806501!GO:0019371;cyclooxygenase pathway;0.0284491541282628!GO:0030663;COPI coated vesicle membrane;0.0284491541282628!GO:0030126;COPI vesicle coat;0.0284491541282628!GO:0050865;regulation of cell activation;0.0284622718585005!GO:0007006;mitochondrial membrane organization and biogenesis;0.0284985839315831!GO:0030518;steroid hormone receptor signaling pathway;0.0284985839315831!GO:0048144;fibroblast proliferation;0.0289845985523019!GO:0048145;regulation of fibroblast proliferation;0.0289845985523019!GO:0030137;COPI-coated vesicle;0.0292033113792788!GO:0051052;regulation of DNA metabolic process;0.03051406693733!GO:0048002;antigen processing and presentation of peptide antigen;0.0306965704733042!GO:0006405;RNA export from nucleus;0.0307327193693576!GO:0019843;rRNA binding;0.0309852614212408!GO:0006984;ER-nuclear signaling pathway;0.0309852614212408!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0311211272065722!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0312578616495243!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0312578616495243!GO:0005138;interleukin-6 receptor binding;0.0314082483243639!GO:0005694;chromosome;0.0318627059075433!GO:0006644;phospholipid metabolic process;0.0322788624562946!GO:0042098;T cell proliferation;0.0323418128957696!GO:0030660;Golgi-associated vesicle membrane;0.0325659859839716!GO:0043407;negative regulation of MAP kinase activity;0.0326366777373066!GO:0032760;positive regulation of tumor necrosis factor production;0.0329786394062312!GO:0004177;aminopeptidase activity;0.0333961121423616!GO:0005350;pyrimidine transmembrane transporter activity;0.0333961121423616!GO:0015855;pyrimidine transport;0.0333961121423616!GO:0015288;porin activity;0.0333961121423616!GO:0033549;MAP kinase phosphatase activity;0.0334735035182747!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0334735035182747!GO:0006749;glutathione metabolic process;0.0335745434256521!GO:0008286;insulin receptor signaling pathway;0.0335809239282888!GO:0016491;oxidoreductase activity;0.0336157462805807!GO:0030118;clathrin coat;0.0336157462805807!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0341927176285685!GO:0032635;interleukin-6 production;0.0350212376832498!GO:0042832;defense response to protozoan;0.0350678081294953!GO:0002443;leukocyte mediated immunity;0.0353542897902229!GO:0008538;proteasome activator activity;0.0353542897902229!GO:0032318;regulation of Ras GTPase activity;0.0356640332026496!GO:0051091;positive regulation of transcription factor activity;0.0357498058582049!GO:0006213;pyrimidine nucleoside metabolic process;0.0360222808747738!GO:0000738;DNA catabolic process, exonucleolytic;0.0362319885653182!GO:0002699;positive regulation of immune effector process;0.0365944582300917!GO:0046483;heterocycle metabolic process;0.0382132024432641!GO:0015036;disulfide oxidoreductase activity;0.038355479177976!GO:0030100;regulation of endocytosis;0.038355479177976!GO:0005869;dynactin complex;0.0387739684519043!GO:0051249;regulation of lymphocyte activation;0.0390708825573938!GO:0000339;RNA cap binding;0.0390708825573938!GO:0006310;DNA recombination;0.0390708825573938!GO:0007162;negative regulation of cell adhesion;0.0390708825573938!GO:0051540;metal cluster binding;0.0390708825573938!GO:0051536;iron-sulfur cluster binding;0.0390708825573938!GO:0008320;protein transmembrane transporter activity;0.0390799187732115!GO:0006261;DNA-dependent DNA replication;0.0391679512483286!GO:0030134;ER to Golgi transport vesicle;0.0393201391540117!GO:0019901;protein kinase binding;0.0393424311405028!GO:0009306;protein secretion;0.0396358789687486!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0397791235211945!GO:0051101;regulation of DNA binding;0.0397849489899805!GO:0005669;transcription factor TFIID complex;0.0400069982628028!GO:0033033;negative regulation of myeloid cell apoptosis;0.0400155904241442!GO:0001803;regulation of type III hypersensitivity;0.0400155904241442!GO:0032733;positive regulation of interleukin-10 production;0.0400155904241442!GO:0033025;regulation of mast cell apoptosis;0.0400155904241442!GO:0001805;positive regulation of type III hypersensitivity;0.0400155904241442!GO:0033023;mast cell homeostasis;0.0400155904241442!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0400155904241442!GO:0033032;regulation of myeloid cell apoptosis;0.0400155904241442!GO:0001802;type III hypersensitivity;0.0400155904241442!GO:0033028;myeloid cell apoptosis;0.0400155904241442!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0400155904241442!GO:0033026;negative regulation of mast cell apoptosis;0.0400155904241442!GO:0033024;mast cell apoptosis;0.0400155904241442!GO:0051087;chaperone binding;0.0400225719949126!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0404077094169438!GO:0002821;positive regulation of adaptive immune response;0.0404077094169438!GO:0050727;regulation of inflammatory response;0.0404077094169438!GO:0031347;regulation of defense response;0.0404077094169438!GO:0042226;interleukin-6 biosynthetic process;0.0406857971966223!GO:0006914;autophagy;0.0406857971966223!GO:0006626;protein targeting to mitochondrion;0.0410713509300617!GO:0008361;regulation of cell size;0.0410823372813133!GO:0042405;nuclear inclusion body;0.0415200681095447!GO:0042992;negative regulation of transcription factor import into nucleus;0.0415200681095447!GO:0042308;negative regulation of protein import into nucleus;0.0415200681095447!GO:0044255;cellular lipid metabolic process;0.0415396986690246!GO:0042585;germinal vesicle;0.0415969830354846!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0417551992320086!GO:0042348;NF-kappaB import into nucleus;0.0417976828545398!GO:0042345;regulation of NF-kappaB import into nucleus;0.0417976828545398!GO:0043681;protein import into mitochondrion;0.0418503247492885!GO:0001562;response to protozoan;0.0429561761834861!GO:0016311;dephosphorylation;0.042999511239436!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.042999511239436!GO:0015002;heme-copper terminal oxidase activity;0.042999511239436!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.042999511239436!GO:0004129;cytochrome-c oxidase activity;0.042999511239436!GO:0008287;protein serine/threonine phosphatase complex;0.0431020885596878!GO:0031327;negative regulation of cellular biosynthetic process;0.0435054614707454!GO:0006302;double-strand break repair;0.0437633455320412!GO:0030433;ER-associated protein catabolic process;0.0437633455320412!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0437633455320412!GO:0008656;caspase activator activity;0.0442559122375103!GO:0000119;mediator complex;0.0442559122375103!GO:0004722;protein serine/threonine phosphatase activity;0.0444877552159329!GO:0043300;regulation of leukocyte degranulation;0.0449056272258027!GO:0030377;U-plasminogen activator receptor activity;0.0449056272258027!GO:0030968;unfolded protein response;0.0449056272258027!GO:0002444;myeloid leukocyte mediated immunity;0.0449083018793398!GO:0030031;cell projection biogenesis;0.0452086843342326!GO:0043488;regulation of mRNA stability;0.045522398782993!GO:0043487;regulation of RNA stability;0.045522398782993!GO:0051881;regulation of mitochondrial membrane potential;0.0457379224758187!GO:0006334;nucleosome assembly;0.0465467085958663!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0465624987404125!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0484228553447597!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0484228553447597!GO:0009126;purine nucleoside monophosphate metabolic process;0.0484228553447597!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0484228553447597!GO:0019783;small conjugating protein-specific protease activity;0.0484421022935154!GO:0045926;negative regulation of growth;0.0490957494801922!GO:0045936;negative regulation of phosphate metabolic process;0.0495288406164584!GO:0051347;positive regulation of transferase activity;0.0497658107263448!GO:0051607;defense response to virus;0.0497658107263448!GO:0046979;TAP2 binding;0.0497658107263448!GO:0046977;TAP binding;0.0497658107263448!GO:0046978;TAP1 binding;0.0497658107263448!GO:0017091;AU-rich element binding;0.0499852312662143!GO:0050779;RNA destabilization;0.0499852312662143!GO:0000289;poly(A) tail shortening;0.0499852312662143!GO:0019955;cytokine binding;0.0499852312662143
|sample_id=11885
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=IRF7:6.20002226303;HLF:5.7662540421;NFE2:5.56900081549;FOS_FOS{B,L1}_JUN{B,D}:5.46820917377;NFIL3:5.27257889193;BACH2:5.14482396247;NFE2L2:5.11408882639;IRF1,2:5.10969153141;NFKB1_REL_RELA:5.10197540961;CEBPA,B_DDIT3:5.09415804329;FOSL2:5.04260997879;PAX8:4.62728748717;FOXP3:4.27857402622;PAX2:4.22663635574;STAT5{A,B}:4.19303186086;SPIB:3.82433587014;NFATC1..3:3.77204596765;HSF1,2:3.6088027941;SPI1:3.39746254476;DMAP1_NCOR{1,2}_SMARC:3.31670388138;ATF5_CREB3:3.19583462169;ETS1,2:3.06988213942;NANOG{mouse}:3.06500795078;STAT2,4,6:3.02993821365;CDX1,2,4:2.81113889428;ATF4:2.54008910761;SREBF1,2:2.49321356982;CREB1:2.46164486913;RUNX1..3:2.44435429298;HMGA1,2:2.37956394696;JUN:2.33733630609;FOXN1:2.28579512053;ATF2:2.11185981932;ATF6:2.07536608083;PAX3,7:1.95994308881;NFE2L1:1.86530227217;ALX4:1.74310640976;PDX1:1.56877169575;RXRA_VDR{dimer}:1.41748264304;ELF1,2,4:1.36611224666;XBP1:1.33073302315;NR1H4:1.29611484765;TGIF1:1.24523919406;POU2F1..3:1.12094259133;MAFB:1.11572747348;PPARG:1.00809663875;ZBTB16:0.978507432868;IKZF1:0.929164371167;HOX{A5,B5}:0.894905499553;RBPJ:0.862787527124;TBP:0.862499807956;FOXO1,3,4:0.740964947899;SRF:0.655405124412;HOXA9_MEIS1:0.631425362209;EN1,2:0.609969567425;OCT4_SOX2{dimer}:0.607691969787;STAT1,3:0.561345553713;NR3C1:0.560726964675;PRDM1:0.489151626217;PAX4:0.416687862405;BPTF:0.315998730527;POU5F1:0.289792100803;ALX1:0.275628193051;VSX1,2:0.211015811578;EP300:0.149222392662;GLI1..3:0.133107605009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.0689055811521;PAX1,9:0.0488816274461;TLX2:0.0259769567;NANOG:-0.0206358964705;HBP1_HMGB_SSRP1_UBTF:-0.0691894913435;RORA:-0.294229051115;GATA4:-0.306938823289;AHR_ARNT_ARNT2:-0.316743585814;HIF1A:-0.343314725771;NKX3-1:-0.379373250475;MEF2{A,B,C,D}:-0.429597271225;SOX2:-0.521905623419;FOX{D1,D2}:-0.522464392263;NR6A1:-0.540271713866;POU3F1..4:-0.54536795748;EGR1..3:-0.562294292607;IKZF2:-0.588101518504;FOXM1:-0.618923811165;RFX2..5_RFXANK_RFXAP:-0.632288330819;SMAD1..7,9:-0.70340422449;NFIX:-0.735120501396;FOXL1:-0.781424850221;MYB:-0.818716111333;DBP:-0.822515552777;TFCP2:-0.834740833787;HMX1:-0.844402611395;PRRX1,2:-0.851330144061;ADNP_IRX_SIX_ZHX:-0.879521736863;CRX:-0.890682952443;PAX6:-0.927069323183;SOX5:-0.980675560172;FOXD3:-0.987404493286;TAL1_TCF{3,4,12}:-1.00364565418;HES1:-1.01753588957;CDC5L:-1.1486298445;FOXA2:-1.2077139945;POU6F1:-1.26748248642;TEF:-1.27802542871;MZF1:-1.29436237568;SPZ1:-1.31713375593;NHLH1,2:-1.3349136137;ESR1:-1.34660588898;PITX1..3:-1.34872288626;REST:-1.3906144623;HNF4A_NR2F1,2:-1.40520766227;HOX{A4,D4}:-1.40787830978;E2F1..5:-1.44715173035;RFX1:-1.44766677264;NKX2-2,8:-1.46887143008;HNF1A:-1.47717269318;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.50854323497;MYFfamily:-1.52837787094;FOX{F1,F2,J1}:-1.52941883917;MED-1{core}:-1.54832619452;ESRRA:-1.55803397914;ZFP161:-1.66396643623;GTF2A1,2:-1.67479758248;ZNF384:-1.70792569753;ZNF238:-1.7135817732;MTE{core}:-1.759965966;CUX2:-1.76340352765;FOXP1:-1.78637362419;TEAD1:-1.84262420086;NKX2-1,4:-1.84843281828;GATA6:-1.90005092106;BREu{core}:-1.93073800518;NKX6-1,2:-1.99869414067;SP1:-2.02061955489;TBX4,5:-2.02223880239;NKX2-3_NKX2-5:-2.03790915392;MYBL2:-2.05282188499;ZBTB6:-2.09388679276;TFDP1:-2.10686902721;HOX{A6,A7,B6,B7}:-2.10800934069;GTF2I:-2.12250228874;SOX{8,9,10}:-2.13656227416;POU1F1:-2.13866342646;ZNF148:-2.21389633466;ELK1,4_GABP{A,B1}:-2.24063645146;TLX1..3_NFIC{dimer}:-2.25792183494;ZEB1:-2.26351557831;GZF1:-2.30449605785;RXR{A,B,G}:-2.30544151344;PATZ1:-2.32177781349;NFY{A,B,C}:-2.32694903358;TFAP4:-2.33557212737;ONECUT1,2:-2.33656963363;TFAP2B:-2.367679967;FOX{I1,J2}:-2.39716289019;NKX3-2:-2.4111227053;MTF1:-2.42729886394;SOX17:-2.43613149107;GFI1B:-2.44973541559;SNAI1..3:-2.48518634851;TP53:-2.4899283084;MAZ:-2.51429518559;XCPE1{core}:-2.53971474197;T:-2.56135281301;GCM1,2:-2.5686900606;ARID5B:-2.60504068121;KLF4:-2.64941004177;TFAP2{A,C}:-2.75846669899;HIC1:-2.76940681943;MYOD1:-2.78980375764;ZIC1..3:-2.94050049396;PBX1:-3.04995594704;EVI1:-3.05022800818;UFEwm:-3.05141827631;bHLH_family:-3.06546006622;AIRE:-3.0989814513;NR5A1,2:-3.11801778035;RREB1:-3.15268808438;EBF1:-3.17210881525;GFI1:-3.21045979708;FOXQ1:-3.21939024529;YY1:-3.32399323697;NRF1:-3.32437192431;PAX5:-3.44826237898;LMO2:-3.64578265091;LHX3,4:-3.83775609932;ZNF423:-3.89810574382;AR:-3.93365574311;ZNF143:-4.00814151883;LEF1_TCF7_TCF7L1,2:-4.07225038205;TOPORS:-4.52909381901;HAND1,2:-5.23271588434
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11885-125D4;search_select_hide=table117:FF:11885-125D4
}}
}}

Latest revision as of 18:26, 4 June 2020

Name:CD14+ monocytes - treated with lipopolysaccharide, donor3
Species:Human (Homo sapiens)
Library ID:CNhs13545
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexfemale
age21
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD5-6
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004980
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13545 CAGE DRX008161 DRR009033
Accession ID Hg19

Library idBAMCTSS
CNhs13545 DRZ000458 DRZ001843
Accession ID Hg38

Library idBAMCTSS
CNhs13545 DRZ011808 DRZ013193
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.95
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.142
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.681
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.474
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0355
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.119
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.213
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.662
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.119
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.709
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.462
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0.548
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.46
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.453
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.783
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.164
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.462
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.203
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.507
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.061
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.355
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.72
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.213
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.836
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.681
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.509
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.934
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.595
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.213
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.652
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.412
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.994
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.425
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.725
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.938
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.29
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.62
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0892
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.29
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.666
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.213
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.355
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.507
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.548
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.412
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.119
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.213
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.355
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.213
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13545

Jaspar motifP-value
MA0002.21.12092e-7
MA0003.10.792
MA0004.10.421
MA0006.10.971
MA0007.10.874
MA0009.10.618
MA0014.10.694
MA0017.10.214
MA0018.20.171
MA0019.10.577
MA0024.10.0103
MA0025.10.00111
MA0027.10.924
MA0028.10.268
MA0029.10.102
MA0030.10.194
MA0031.10.324
MA0035.20.291
MA0038.10.779
MA0039.20.952
MA0040.10.537
MA0041.10.331
MA0042.10.896
MA0043.17.5311e-9
MA0046.10.0125
MA0047.20.336
MA0048.10.518
MA0050.12.43811e-17
MA0051.13.25306e-12
MA0052.10.227
MA0055.10.394
MA0057.10.424
MA0058.10.231
MA0059.10.172
MA0060.12.71443e-7
MA0061.12.59844e-19
MA0062.20.393
MA0065.20.0312
MA0066.10.0445
MA0067.12.56984e-5
MA0068.10.679
MA0069.10.803
MA0070.10.0168
MA0071.10.589
MA0072.10.611
MA0073.10.468
MA0074.10.145
MA0076.10.255
MA0077.10.271
MA0078.10.651
MA0079.20.159
MA0080.22.33178e-11
MA0081.15.93178e-4
MA0083.10.522
MA0084.10.687
MA0087.10.806
MA0088.10.722
MA0090.10.378
MA0091.10.861
MA0092.10.338
MA0093.10.454
MA0099.28.88674e-41
MA0100.10.894
MA0101.15.93033e-24
MA0102.21.15461e-9
MA0103.10.0339
MA0104.20.343
MA0105.15.29727e-22
MA0106.10.867
MA0107.12.10004e-30
MA0108.20.61
MA0111.10.468
MA0112.24.83706e-4
MA0113.10.738
MA0114.10.19
MA0115.10.874
MA0116.12.34836e-4
MA0117.10.0629
MA0119.10.132
MA0122.10.494
MA0124.10.321
MA0125.10.204
MA0131.10.528
MA0135.10.29
MA0136.11.2276e-12
MA0137.20.0106
MA0138.20.226
MA0139.10.966
MA0140.10.455
MA0141.10.227
MA0142.10.637
MA0143.10.958
MA0144.10.0206
MA0145.10.543
MA0146.10.57
MA0147.10.437
MA0148.10.775
MA0149.10.244
MA0150.13.89021e-21
MA0152.10.917
MA0153.10.00251
MA0154.12.22767e-4
MA0155.10.976
MA0156.12.54418e-9
MA0157.10.986
MA0159.10.0365
MA0160.10.138
MA0162.10.934
MA0163.19.94687e-9
MA0164.10.616
MA0258.10.0313
MA0259.10.748



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13545

Novel motifP-value
10.0912
100.0236
1000.91
1010.982
1020.916
1030.216
1040.497
1050.179
1067.14567e-4
1070.236
1080.614
1090.299
110.149
1100.148
1110.113
1120.427
1130.429
1140.0317
1150.156
1160.885
1170.0846
1180.209
1190.124
120.297
1200.563
1210.773
1220.7
1230.611
1240.836
1250.168
1260.226
1270.577
1280.0706
1290.328
130.0827
1300.433
1310.917
1320.122
1330.878
1340.566
1350.756
1360.766
1370.0344
1380.506
1390.112
140.546
1400.601
1410.261
1420.235
1430.0315
1440.445
1450.299
1460.872
1470.869
1480.0108
1490.97
150.156
1500.31
1510.602
1520.541
1530.802
1540.795
1550.853
1560.7
1570.863
1580.0946
1590.0737
160.313
1600.404
1610.41
1620.253
1630.158
1640.168
1650.18
1660.999
1670.281
1680.0735
1690.0193
170.274
180.111
190.555
20.398
200.173
210.81
220.346
230.0393
240.384
250.418
260.0591
270.565
280.308
290.243
30.12
300.365
310.719
320.411
330.161
340.771
350.108
360.0594
370.065
380.397
390.782
40.921
400.192
410.0283
420.294
430.0198
440.537
450.75
460.187
470.501
480.477
490.153
50.296
500.947
510.56
520.349
530.67
540.482
550.62
560.697
570.835
580.185
590.247
60.747
600.04
610.729
620.0928
630.533
640.484
650.232
660.424
670.399
680.461
690.21
70.218
700.0435
710.0284
720.193
730.268
740.0454
750.146
760.171
770.563
780.122
790.693
80.337
800.158
810.289
820.203
830.033
840.0836
850.0517
860.0831
870.341
880.758
890.213
90.389
900.0838
910.437
920.27
930.489
940.0886
950.538
960.404
970.466
980.156
990.0948



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13545


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000335 (LPS treatment sample)
0011108 (human CD14-positive monocytes - treated with lipopolysaccharide sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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