FF:11889-125D8: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{f5samples
|id=FF:11889-125D8
|name=CD14+ monocytes - treated with B-glucan, donor3
|sample_id=11889
|rna_tube_id=
|rna_box=125
|rna_position=D8
|sample_cell_lot=
|sa...") |
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005156 | ||
| | |accession_numbers=CAGE;DRX008137;DRR009009;DRZ000434;DRZ001819;DRZ011784;DRZ013169 | ||
| | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000630,FF:0011102 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.35!2226.17!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.73!539.20!SPI1;;chr21:34442439..34442455,+!p1@OLIG1!2.56!360.50!OLIG1;;chr10:64576105..64576133,-!p1@EGR2!2.51!640.47!EGR2;;chr7:115670804..115670825,-!p1@TFEC!2.49!307.85!TFEC;;chr16:85932760..85932775,+!p1@IRF8!2.41!254.58!IRF8;;chr12:54778471..54778528,-!p1@ZNF385A!2.32!205.65!ZNF385A;;chr11:47399947..47399961,-!p3@SPI1!2.12!131.93!SPI1;;chr20:39317868..39317884,-!p1@MAFB!2.06!1271.34!MAFB;;chr6:106534192..106534224,+!p1@PRDM1!2.06!309.71!PRDM1;;chr21:34398234..34398250,+!p1@OLIG2!2.06!112.73!OLIG2;;chr11:47400062..47400077,-!p2@SPI1!2.06!112.73!SPI1;;chr3:12330560..12330579,+!p1@PPARG!1.97!104.68!PPARG;;chr19:45971246..45971265,+!p1@FOSB!1.95!1536.14!FOSB;;chr10:64018918..64018936,+!p2@ZNF365!1.94!85.48!ZNF365;;chr2:157189180..157189290,-!p1@NR4A2!1.93!419.96!NR4A2;;chr11:47399996..47400014,-!p4@SPI1!1.90!78.67!SPI1;;chr9:102584159..102584174,+!p2@NR4A3!1.84!120.79!NR4A3;;chr10:31288398..31288455,-!p2@ZNF438!1.84!78.67!ZNF438;;chr12:52445218..52445237,+!p1@NR4A1!1.83!786.03!NR4A1;;chr10:35484053..35484076,+!p1@CREM!1.83!161.05!CREM;;chr3:12329397..12329433,+!p2@PPARG!1.82!143.70!PPARG;;chr8:22550982..22550999,-!p1@EGR3!1.81!174.05!EGR3;;chr6:106534230..106534254,+!p2@PRDM1!1.79!147.11!PRDM1;;chr11:47400032..47400043,-!p5@SPI1!1.79!61.01!SPI1;;chr2:145277640..145277771,-!p1@ZEB2!1.75!695.29!ZEB2;;chr2:70142232..70142251,+!p1@MXD1!1.74!288.03!MXD1;;chr14:35872453..35872485,-!p2@NFKBIA!1.74!127.60!NFKBIA;;chr12:72056800..72056834,+!p1@THAP2!1.74!72.16!THAP2;;chr16:31885093..31885165,+!p1@ZNF267!1.73!762.19!ZNF267;;chr1:25256756..25256774,-!p1@RUNX3!1.72!94.77!RUNX3;;chr1:212782094..212782109,+!p1@ATF3!1.71!1287.45!ATF3;;chr19:36391434..36391450,-!p1@NFKBID!1.71!96.32!NFKBID;;chr10:31288370..31288393,-!p3@ZNF438!1.71!49.86!ZNF438;;chr2:68592394..68592405,+!p2@PLEK!1.66!44.60!PLEK;;chr10:51572408..51572454,+!p3@NCOA4!1.65!245.60!NCOA4;;chr19:50432132..50432217,+!p2@ATF5!1.65!51.41!ATF5;;chr2:61108695..61108753,+!p1@REL!1.63!274.09!REL;;chr20:48599506..48599526,+!p1@SNAI1!1.63!257.37!SNAI1;;chr2:145275162..145275202,-!p2@ZEB2!1.61!222.37!ZEB2;;chr14:35873947..35873965,-!p1@NFKBIA!1.57!2168.87!NFKBIA;;chr22:38597987..38598021,+!p2@MAFF!1.57!213.39!MAFF;;chr21:30671690..30671762,+!p2@BACH1!1.57!117.69!BACH1;;chr11:47400045..47400060,-!p6@SPI1!1.56!35.31!SPI1;;chr4:103422499..103422632,+!p1@NFKB1!1.55!688.48!NFKB1;;chr9:102584262..102584276,+!p1@NR4A3!1.55!75.57!NR4A3;;chr6:144385698..144385742,-!p2@PLAGL1!1.55!41.50!PLAGL1;;chr10:104155480..104155534,+!p2@NFKB2!1.54!208.74!NFKB2;;chr12:72056773..72056796,+!p3@THAP2!1.54!43.67!THAP2;;chr19:54041669..54041697,+!p2@ZNF331!1.54!33.45!ZNF331;;chr6:15246200..15246214,+!p2@JARID2!1.52!85.48!JARID2;;chr7:50344289..50344323,+!p1@IKZF1!1.51!31.59!IKZF1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.51!31.28!ZBED1;;chr12:72056749..72056767,+!p6@THAP2!1.50!33.76!THAP2;;chrX:153305787..153305807,-!p3@MECP2!1.50!30.97!MECP2;;chr21:30671235..30671253,+!p1@BACH1!1.49!365.76!BACH1;;chr12:54778351..54778378,-!p6@ZNF385A!1.49!30.04!ZNF385A;;chr21:34442540..34442560,+!p2@OLIG1!1.49!29.73!OLIG1;;chr4:106068026..106068084,+!p1@TET2!1.48!249.31!TET2;;chr9:102584128..102584144,+!p3@NR4A3!1.48!55.13!NR4A3;;chr11:47399920..47399931,-!p7@SPI1!1.47!28.49!SPI1;;chr20:48807351..48807384,+!p1@CEBPB!1.46!2692.59!CEBPB;;chr6:44233252..44233296,-!p1@NFKBIE!1.45!255.51!NFKBIE;;chr2:97202480..97202499,+!p1@ARID5A!1.44!258.91!ARID5A;;chr21:36260295..36260310,-!p3@RUNX1!1.44!42.43!RUNX1;;chr10:104154246..104154347,+!p3@NFKB2!1.41!146.49!NFKB2;;chr13:41593425..41593480,-!p1@ELF1!1.40!146.80!ELF1;;chr18:77155922..77155939,+!p1@NFATC1!1.40!64.42!NFATC1;;chr10:51572339..51572376,+!p4@NCOA4!1.40!53.89!NCOA4;;chr10:104155659..104155676,+!p4@NFKB2!1.40!29.73!NFKB2;;chr12:48298765..48298783,-!p2@VDR!1.39!48.00!VDR;;chr17:38497662..38497713,+!p4@RARA!1.39!26.94!RARA;;chr1:37940170..37940190,+!p1@ZC3H12A!1.37!266.66!ZC3H12A;;chr14:35872962..35873025,-!p3@NFKBIA!1.37!55.75!NFKBIA;;chr2:70314240..70314256,+!p4@PCBP1!1.37!46.15!PCBP1;;chr9:110252035..110252057,-!p1@KLF4!1.35!329.22!KLF4;;chr9:129567282..129567353,+!p1@ZBTB43!1.35!269.44!ZBTB43;;chrX:129244454..129244488,-!p1@ELF4!1.34!147.73!ELF4;;chr6:12012170..12012245,+!p1@HIVEP1!1.34!101.58!HIVEP1;;chr19:19496539..19496576,+!p8@GATAD2A!1.34!35.93!GATAD2A;;chr2:145277882..145277967,-!p3@ZEB2!1.34!35.62!ZEB2;;chr2:192015701..192015743,-!p1@STAT4!1.34!28.18!STAT4;;chr19:54058073..54058088,+!p1@ZNF331!1.34!21.06!ZNF331;;chr8:53373491..53373506,-!p4@ST18!1.34!20.75!ST18;;chr18:3449618..3449634,+!p13@TGIF1!1.33!25.09!TGIF1;;chr3:150126101..150126118,+!p6@TSC22D2!1.32!32.52!TSC22D2;;chr8:80679993..80680011,-!p1@HEY1!1.31!28.18!HEY1;;chr2:61108808..61108821,+!p3@REL!1.31!24.16!REL;;chr2:238600998..238601013,+!p5@LRRFIP1!1.31!19.20!LRRFIP1;;chr6:12012249..12012266,+!p5@HIVEP1!1.30!32.52!HIVEP1;;chr6:106535598..106535637,+!p7@PRDM1!1.30!18.89!PRDM1;;ch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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 67: | Line 41: | ||
|fonse_treatment=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11889-125D8 | |fonse_treatment=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11889-125D8 | ||
|fonse_treatment_closure=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11889-125D8 | |fonse_treatment_closure=EFO:0000369,FF:0000625,FF:0000630,FF:0011102,FF:11889-125D8 | ||
|has_quality= | |||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor3.CNhs13495.11889-125D8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor3.CNhs13495.11889-125D8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor3.CNhs13495.11889-125D8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor3.CNhs13495.11889-125D8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520B-glucan%252c%2520donor3.CNhs13495.11889-125D8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11889-125D8 | |||
|is_a=EFO:0002091;;FF:0011102 | |||
|is_obsolete= | |||
|library_id=CNhs13495 | |||
|library_id_phase_based=2:CNhs13495 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11889 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11889 | |||
|name=CD14+ monocytes - treated with B-glucan, donor3 | |||
|namespace= | |||
|part_of= | |||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs13495,LSID1025,release012,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.117173940088031,0.387451892572339,0,0,0.117173940088031,0,0.189702211562351,0,0.265266997402894,0.484734357811147,0,0.209357552049835,0.209357552049835,0.117173940088031,0,0,0,0,0,0.117173940088031,0.350020241648737,0,0,-0.0361490702603967,0,0,0,0.203145033134716,0,0.187401147542182,0,0.457047795570826,0.684920320648499,0,0,0,0.117173940088031,0,0,0,1.24090945489453,0,0,0.209357552049835,0,0.0401498320611829,0.117173940088031,0.117173940088031,0,0,0.306236358621771,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0493179279238047,0,0.188366682567634,0,0.456098423073655,-0.097343627213097,0,0.898687227364456,0,0,0,0.209357552049835,0,0,0,0,0.817876910427361,0,0,0.837867423654343,0,0,0,0.129109826394686,0,0,0.209357552049835,0.143426198801019,0,0,-0.552571649267773,0,0,0,-0.0584468268118252,0.152405998428185,0.104678776024917,0,0.842355708149935,0,0.187323692572533,0.316387616069203,0,0,0,0,0,0.92466035466117,0,0,0,0,0,0,0.175010120824369,0,0,0,0,-0.0377866238784455,0,0,0,0.0696943730529072,-0.0722618649535419,0,0.644120392089466,0.19943806761296,0,0,0 | |||
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| |||
|rna_box=125 | |||
|rna_catalog_number= | |||
|rna_concentration=0.60969 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |||
|rna_lot_number=D5-10 | |||
|rna_od260/230=1.24 | |||
|rna_od260/280=2 | |||
|rna_position=D8 | |||
|rna_rin=9.1 | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=125D8 | |||
|rna_weight_ug=2.743605 | |||
|sample_age=21 | |||
|sample_category=primary cells | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot= | |||
|sample_cell_type=monocyte | |||
|sample_collaboration=Christine Wells (University of Queensland) | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)=donor3 | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.71511665547996e-271!GO:0005737;cytoplasm;7.20707969734414e-123!GO:0043227;membrane-bound organelle;5.00790861057117e-119!GO:0043231;intracellular membrane-bound organelle;1.07645117637548e-118!GO:0043226;organelle;8.4437214460066e-111!GO:0043229;intracellular organelle;5.32066263962412e-110!GO:0044444;cytoplasmic part;4.27460446056488e-79!GO:0005515;protein binding;5.66325351104692e-72!GO:0044422;organelle part;5.38574537999514e-70!GO:0044237;cellular metabolic process;9.16771744088894e-69!GO:0044446;intracellular organelle part;1.87357492746729e-68!GO:0044238;primary metabolic process;5.82046425738102e-68!GO:0043170;macromolecule metabolic process;3.98055692726137e-65!GO:0032991;macromolecular complex;2.35939757605133e-59!GO:0003723;RNA binding;7.70359127127012e-55!GO:0030529;ribonucleoprotein complex;1.35939154051806e-51!GO:0005634;nucleus;1.09269361087333e-50!GO:0044428;nuclear part;4.53719212172246e-49!GO:0019538;protein metabolic process;7.96437514941309e-47!GO:0044267;cellular protein metabolic process;8.40401015610752e-44!GO:0044260;cellular macromolecule metabolic process;1.27020691001042e-43!GO:0033036;macromolecule localization;7.42510058532286e-43!GO:0015031;protein transport;1.20562465577054e-41!GO:0045184;establishment of protein localization;2.48430215885826e-41!GO:0006412;translation;1.15367037703998e-39!GO:0008104;protein localization;1.51761587672095e-39!GO:0043233;organelle lumen;2.6154416449781e-39!GO:0031974;membrane-enclosed lumen;2.6154416449781e-39!GO:0043283;biopolymer metabolic process;1.47057854912984e-36!GO:0005829;cytosol;9.37053739081827e-36!GO:0010467;gene expression;1.25722577905097e-34!GO:0006396;RNA processing;2.51777780379961e-32!GO:0031090;organelle membrane;3.71267098407101e-32!GO:0016071;mRNA metabolic process;3.85859343205477e-32!GO:0006915;apoptosis;1.20394262590899e-31!GO:0012501;programmed cell death;1.56967639345576e-31!GO:0031981;nuclear lumen;6.58394383472984e-31!GO:0008219;cell death;5.55466716741215e-30!GO:0016265;death;5.55466716741215e-30!GO:0009059;macromolecule biosynthetic process;7.0214942844247e-30!GO:0043234;protein complex;8.45669501400886e-30!GO:0008380;RNA splicing;6.18816717594163e-29!GO:0046907;intracellular transport;9.98538465436149e-29!GO:0009058;biosynthetic process;1.01214531416935e-28!GO:0044249;cellular biosynthetic process;1.02841638844924e-28!GO:0016043;cellular component organization and biogenesis;2.40779286736378e-28!GO:0006886;intracellular protein transport;3.52219840489036e-28!GO:0006397;mRNA processing;2.0338088616793e-27!GO:0005739;mitochondrion;2.56892013912874e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.01354050615184e-26!GO:0005840;ribosome;6.84906825181063e-26!GO:0031967;organelle envelope;9.99724911476692e-26!GO:0031975;envelope;1.4663557298384e-25!GO:0003735;structural constituent of ribosome;3.24368799897861e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.3641687429856e-23!GO:0033279;ribosomal subunit;7.68334837674676e-23!GO:0051649;establishment of cellular localization;4.27470672858402e-22!GO:0065003;macromolecular complex assembly;1.18228139352697e-21!GO:0044445;cytosolic part;2.10032843507477e-21!GO:0051641;cellular localization;2.39827737263627e-21!GO:0005654;nucleoplasm;2.48518493213542e-21!GO:0042981;regulation of apoptosis;3.18687782748756e-21!GO:0005681;spliceosome;3.31017667512681e-21!GO:0043067;regulation of programmed cell death;7.98890113661083e-21!GO:0008134;transcription factor binding;9.94812130723385e-21!GO:0044429;mitochondrial part;5.02308698436086e-20!GO:0000166;nucleotide binding;1.20313750164463e-19!GO:0022607;cellular component assembly;2.04250013544995e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.67956070616235e-18!GO:0044451;nucleoplasm part;5.11303015078463e-18!GO:0044265;cellular macromolecule catabolic process;6.80445664135939e-18!GO:0016192;vesicle-mediated transport;1.0019014157691e-17!GO:0007243;protein kinase cascade;1.11541173866955e-17!GO:0048770;pigment granule;1.70394110001323e-17!GO:0042470;melanosome;1.70394110001323e-17!GO:0006512;ubiquitin cycle;2.38948015704636e-17!GO:0048523;negative regulation of cellular process;4.41068564973962e-17!GO:0043412;biopolymer modification;2.0545845035212e-16!GO:0006119;oxidative phosphorylation;3.69865321512926e-16!GO:0005740;mitochondrial envelope;5.96418836186738e-16!GO:0005773;vacuole;7.87207683329522e-16!GO:0017111;nucleoside-triphosphatase activity;8.00698086218096e-16!GO:0043285;biopolymer catabolic process;8.30722257334545e-16!GO:0016070;RNA metabolic process;1.21899214703473e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.27303451302823e-15!GO:0016462;pyrophosphatase activity;1.31419617596845e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.75453512158222e-15!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.29759471221138e-15!GO:0006464;protein modification process;2.37742304116574e-15!GO:0048519;negative regulation of biological process;2.39465896737693e-15!GO:0031966;mitochondrial membrane;2.82492999567638e-15!GO:0003676;nucleic acid binding;3.04523891632221e-15!GO:0019941;modification-dependent protein catabolic process;3.82632481149242e-15!GO:0043632;modification-dependent macromolecule catabolic process;3.82632481149242e-15!GO:0050794;regulation of cellular process;3.92288992577333e-15!GO:0007242;intracellular signaling cascade;4.37823494504447e-15!GO:0006996;organelle organization and biogenesis;5.37344717860825e-15!GO:0044257;cellular protein catabolic process;5.47379747056165e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;5.47828237986494e-15!GO:0006511;ubiquitin-dependent protein catabolic process;5.49443841502099e-15!GO:0043687;post-translational protein modification;7.56534542201079e-15!GO:0022618;protein-RNA complex assembly;7.62862274240683e-15!GO:0009057;macromolecule catabolic process;1.0617398948254e-14!GO:0006605;protein targeting;1.77938236208819e-14!GO:0032553;ribonucleotide binding;2.19500798302252e-14!GO:0032555;purine ribonucleotide binding;2.19500798302252e-14!GO:0019866;organelle inner membrane;2.41637140252416e-14!GO:0000323;lytic vacuole;5.05055196063884e-14!GO:0005764;lysosome;5.05055196063884e-14!GO:0043069;negative regulation of programmed cell death;1.07022658136373e-13!GO:0043066;negative regulation of apoptosis;1.0740595952306e-13!GO:0006913;nucleocytoplasmic transport;1.26731757002327e-13!GO:0017076;purine nucleotide binding;1.41973575508885e-13!GO:0016604;nuclear body;1.56370592924882e-13!GO:0044248;cellular catabolic process;1.66030861193562e-13!GO:0051169;nuclear transport;2.40902221223634e-13!GO:0016874;ligase activity;4.15444682002155e-13!GO:0030163;protein catabolic process;4.59343111642001e-13!GO:0003712;transcription cofactor activity;5.34201795610459e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.5476499291949e-13!GO:0002376;immune system process;6.76420967199846e-13!GO:0065009;regulation of a molecular function;7.11012056950797e-13!GO:0006950;response to stress;7.80903158001005e-13!GO:0000502;proteasome complex (sensu Eukaryota);1.25535142899137e-12!GO:0015934;large ribosomal subunit;1.5645098068907e-12!GO:0008135;translation factor activity, nucleic acid binding;1.73705977214586e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.95715189007567e-12!GO:0005768;endosome;2.55142400583144e-12!GO:0006457;protein folding;2.75525265725437e-12!GO:0050789;regulation of biological process;2.82256305277706e-12!GO:0006366;transcription from RNA polymerase II promoter;3.11869768643233e-12!GO:0016607;nuclear speck;4.20999907999115e-12!GO:0051246;regulation of protein metabolic process;6.60789762848174e-12!GO:0006793;phosphorus metabolic process;7.8034175796262e-12!GO:0006796;phosphate metabolic process;7.8034175796262e-12!GO:0005743;mitochondrial inner membrane;9.09876103976222e-12!GO:0012505;endomembrane system;9.77266723859524e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.52663397805568e-11!GO:0006259;DNA metabolic process;1.52663397805568e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.60882035364381e-11!GO:0005794;Golgi apparatus;2.25731892977399e-11!GO:0015935;small ribosomal subunit;2.8360116856448e-11!GO:0003743;translation initiation factor activity;2.9990751850784e-11!GO:0048522;positive regulation of cellular process;6.63071463426463e-11!GO:0006916;anti-apoptosis;6.65666332697896e-11!GO:0065007;biological regulation;8.92500049312895e-11!GO:0006413;translational initiation;1.21793416438021e-10!GO:0044455;mitochondrial membrane part;1.25472192071206e-10!GO:0051082;unfolded protein binding;1.43798155765175e-10!GO:0005730;nucleolus;3.9573491575722e-10!GO:0006446;regulation of translational initiation;3.9881386477811e-10!GO:0016310;phosphorylation;4.24660957521993e-10!GO:0031324;negative regulation of cellular metabolic process;4.94158557881527e-10!GO:0005524;ATP binding;5.45008933220634e-10!GO:0048518;positive regulation of biological process;5.64292322178645e-10!GO:0032559;adenyl ribonucleotide binding;6.15812456184098e-10!GO:0051186;cofactor metabolic process;6.35536502259716e-10!GO:0005635;nuclear envelope;6.48069995406971e-10!GO:0016787;hydrolase activity;7.33389457833941e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.4853766131963e-10!GO:0006955;immune response;9.34767487990538e-10!GO:0008639;small protein conjugating enzyme activity;1.9584912707127e-09!GO:0050790;regulation of catalytic activity;2.0753711946228e-09!GO:0019829;cation-transporting ATPase activity;2.74281743454431e-09!GO:0004842;ubiquitin-protein ligase activity;3.01171302686289e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.46948485063427e-09!GO:0030554;adenyl nucleotide binding;3.67599616139709e-09!GO:0009056;catabolic process;3.77467760531537e-09!GO:0006732;coenzyme metabolic process;3.80366017543587e-09!GO:0019787;small conjugating protein ligase activity;4.15453075931853e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;4.27744525873653e-09!GO:0000375;RNA splicing, via transesterification reactions;4.27744525873653e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.27744525873653e-09!GO:0005770;late endosome;4.46354660890096e-09!GO:0048193;Golgi vesicle transport;5.3890697064012e-09!GO:0009967;positive regulation of signal transduction;6.30832840021964e-09!GO:0015986;ATP synthesis coupled proton transport;6.36855549575781e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.36855549575781e-09!GO:0017038;protein import;7.48865170721436e-09!GO:0016564;transcription repressor activity;1.18882887667785e-08!GO:0005746;mitochondrial respiratory chain;1.34952129685791e-08!GO:0007049;cell cycle;1.45557040556934e-08!GO:0009615;response to virus;1.57184052438574e-08!GO:0006163;purine nucleotide metabolic process;1.59527270046404e-08!GO:0043065;positive regulation of apoptosis;1.67480095094331e-08!GO:0051170;nuclear import;1.75607100329986e-08!GO:0009892;negative regulation of metabolic process;1.87396176186261e-08!GO:0006164;purine nucleotide biosynthetic process;2.01438789729299e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.11631329972133e-08!GO:0006417;regulation of translation;2.18290548028641e-08!GO:0009150;purine ribonucleotide metabolic process;2.25149429839281e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.34326588941694e-08!GO:0016887;ATPase activity;2.43106170038844e-08!GO:0043068;positive regulation of programmed cell death;2.43536411264188e-08!GO:0031965;nuclear membrane;2.43536411264188e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.6110445481008e-08!GO:0042623;ATPase activity, coupled;2.75910052369397e-08!GO:0005783;endoplasmic reticulum;2.81671772948995e-08!GO:0051726;regulation of cell cycle;3.81851113219989e-08!GO:0005774;vacuolar membrane;4.02023508968146e-08!GO:0050136;NADH dehydrogenase (quinone) activity;4.02023508968146e-08!GO:0003954;NADH dehydrogenase activity;4.02023508968146e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.02023508968146e-08!GO:0006606;protein import into nucleus;4.38644747538334e-08!GO:0019222;regulation of metabolic process;4.56580325532275e-08!GO:0000074;regulation of progression through cell cycle;4.8566916803053e-08!GO:0009607;response to biotic stimulus;4.99448545122229e-08!GO:0016481;negative regulation of transcription;5.82501809410317e-08!GO:0048468;cell development;6.14413436554085e-08!GO:0009259;ribonucleotide metabolic process;6.23158983773579e-08!GO:0016881;acid-amino acid ligase activity;7.44338068831061e-08!GO:0044453;nuclear membrane part;7.64377972668967e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.0742987792271e-08!GO:0008565;protein transporter activity;8.21297756689091e-08!GO:0007264;small GTPase mediated signal transduction;8.88205738327251e-08!GO:0006754;ATP biosynthetic process;9.56669375093849e-08!GO:0006753;nucleoside phosphate metabolic process;9.56669375093849e-08!GO:0003924;GTPase activity;1.55604334017535e-07!GO:0009889;regulation of biosynthetic process;1.55880666679235e-07!GO:0009260;ribonucleotide biosynthetic process;1.56037188887393e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.61939564577325e-07!GO:0003713;transcription coactivator activity;1.87587136108875e-07!GO:0045786;negative regulation of progression through cell cycle;1.8920979995435e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.10292545632411e-07!GO:0044437;vacuolar part;2.14873621355427e-07!GO:0006917;induction of apoptosis;2.17740032086991e-07!GO:0005793;ER-Golgi intermediate compartment;2.71601528090283e-07!GO:0005765;lysosomal membrane;2.79979504835333e-07!GO:0019899;enzyme binding;2.95818741052937e-07!GO:0046034;ATP metabolic process;3.11338972742451e-07!GO:0009966;regulation of signal transduction;3.26848978707773e-07!GO:0043228;non-membrane-bound organelle;3.35427128112524e-07!GO:0043232;intracellular non-membrane-bound organelle;3.35427128112524e-07!GO:0006461;protein complex assembly;3.42863292447823e-07!GO:0012502;induction of programmed cell death;3.55895327273214e-07!GO:0008047;enzyme activator activity;3.67468433377191e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.79963304239661e-07!GO:0031326;regulation of cellular biosynthetic process;3.90606937394246e-07!GO:0005525;GTP binding;4.07872065693162e-07!GO:0050657;nucleic acid transport;4.29144596031337e-07!GO:0051236;establishment of RNA localization;4.29144596031337e-07!GO:0050658;RNA transport;4.29144596031337e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.51815140012529e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.51815140012529e-07!GO:0042775;organelle ATP synthesis coupled electron transport;5.22396923194868e-07!GO:0042773;ATP synthesis coupled electron transport;5.22396923194868e-07!GO:0006403;RNA localization;5.58470124030223e-07!GO:0044440;endosomal part;5.90749476686392e-07!GO:0010008;endosome membrane;5.90749476686392e-07!GO:0009055;electron carrier activity;5.95956442094084e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;6.40259510959621e-07!GO:0009142;nucleoside triphosphate biosynthetic process;6.50810483907747e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.50810483907747e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.52157207953506e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.52157207953506e-07!GO:0030964;NADH dehydrogenase complex (quinone);8.14498699248111e-07!GO:0045271;respiratory chain complex I;8.14498699248111e-07!GO:0005747;mitochondrial respiratory chain complex I;8.14498699248111e-07!GO:0032446;protein modification by small protein conjugation;8.64454079159352e-07!GO:0016568;chromatin modification;9.82139354012702e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.01499489985499e-06!GO:0009108;coenzyme biosynthetic process;1.22014793968229e-06!GO:0003714;transcription corepressor activity;1.36123073472381e-06!GO:0005643;nuclear pore;1.39008250719442e-06!GO:0051188;cofactor biosynthetic process;1.45324269285202e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.50578499517729e-06!GO:0016567;protein ubiquitination;1.51529620310931e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.6596396892665e-06!GO:0006323;DNA packaging;1.72275173646225e-06!GO:0006752;group transfer coenzyme metabolic process;2.5280442347721e-06!GO:0044432;endoplasmic reticulum part;2.56384840134116e-06!GO:0009141;nucleoside triphosphate metabolic process;2.66322947751708e-06!GO:0016563;transcription activator activity;3.37645100103713e-06!GO:0016044;membrane organization and biogenesis;3.61076524793236e-06!GO:0031982;vesicle;3.83207519162897e-06!GO:0004386;helicase activity;3.8474352461321e-06!GO:0031980;mitochondrial lumen;5.07568628980154e-06!GO:0005759;mitochondrial matrix;5.07568628980154e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.60085375776017e-06!GO:0016197;endosome transport;6.28316317837963e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.3314295075513e-06!GO:0015399;primary active transmembrane transporter activity;6.3314295075513e-06!GO:0051789;response to protein stimulus;6.43893973373903e-06!GO:0006986;response to unfolded protein;6.43893973373903e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.51107546785897e-06!GO:0051028;mRNA transport;6.53046439478623e-06!GO:0031323;regulation of cellular metabolic process;6.80076137726838e-06!GO:0032561;guanyl ribonucleotide binding;7.73913292385373e-06!GO:0019001;guanyl nucleotide binding;7.73913292385373e-06!GO:0006974;response to DNA damage stimulus;7.98498220289994e-06!GO:0022402;cell cycle process;8.04237515175278e-06!GO:0008026;ATP-dependent helicase activity;8.14998819190719e-06!GO:0006888;ER to Golgi vesicle-mediated transport;9.34810386184404e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.03639786644865e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.03832947990001e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.05080039054122e-05!GO:0048475;coated membrane;1.28343453346293e-05!GO:0030117;membrane coat;1.28343453346293e-05!GO:0046930;pore complex;1.45046664256857e-05!GO:0030695;GTPase regulator activity;1.69577278302594e-05!GO:0031902;late endosome membrane;1.86399103652729e-05!GO:0031252;leading edge;2.18256906157525e-05!GO:0008632;apoptotic program;2.25340441216076e-05!GO:0031410;cytoplasmic vesicle;2.40036593093926e-05!GO:0003724;RNA helicase activity;2.76565568470081e-05!GO:0030099;myeloid cell differentiation;3.11918138863002e-05!GO:0005769;early endosome;3.15789051519117e-05!GO:0030120;vesicle coat;3.52361608514413e-05!GO:0030662;coated vesicle membrane;3.52361608514413e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.59571957439524e-05!GO:0042254;ribosome biogenesis and assembly;3.77260671555039e-05!GO:0031988;membrane-bound vesicle;3.84677066616835e-05!GO:0051338;regulation of transferase activity;3.99857760506971e-05!GO:0005789;endoplasmic reticulum membrane;4.19133331126446e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.29800354421849e-05!GO:0043566;structure-specific DNA binding;4.33707952324577e-05!GO:0051168;nuclear export;4.37424302405798e-05!GO:0051276;chromosome organization and biogenesis;4.37424302405798e-05!GO:0004298;threonine endopeptidase activity;4.43192292574905e-05!GO:0006954;inflammatory response;5.64446734943989e-05!GO:0003697;single-stranded DNA binding;5.67017847810445e-05!GO:0006401;RNA catabolic process;5.67240488414707e-05!GO:0051336;regulation of hydrolase activity;5.80942446224239e-05!GO:0006281;DNA repair;6.39648660978284e-05!GO:0009893;positive regulation of metabolic process;6.75957119290524e-05!GO:0045892;negative regulation of transcription, DNA-dependent;7.05938337251162e-05!GO:0065002;intracellular protein transport across a membrane;7.54752325311594e-05!GO:0007050;cell cycle arrest;7.88224834985607e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.4822962785207e-05!GO:0009060;aerobic respiration;8.84036043409169e-05!GO:0043549;regulation of kinase activity;9.08705255213921e-05!GO:0043492;ATPase activity, coupled to movement of substances;9.31701852961479e-05!GO:0006897;endocytosis;9.44952571610557e-05!GO:0010324;membrane invagination;9.44952571610557e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;9.67728388617581e-05!GO:0006613;cotranslational protein targeting to membrane;0.000105903831793701!GO:0046822;regulation of nucleocytoplasmic transport;0.000107746773245888!GO:0010468;regulation of gene expression;0.000125348894208464!GO:0016023;cytoplasmic membrane-bound vesicle;0.000126707798020433!GO:0005096;GTPase activator activity;0.000129741593532743!GO:0046519;sphingoid metabolic process;0.000135871463062988!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00013587758087527!GO:0045859;regulation of protein kinase activity;0.000136977939793572!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000143527595325708!GO:0030532;small nuclear ribonucleoprotein complex;0.000152338171262499!GO:0001816;cytokine production;0.000159328916616578!GO:0008234;cysteine-type peptidase activity;0.000161304041768209!GO:0007005;mitochondrion organization and biogenesis;0.000161952506712321!GO:0045259;proton-transporting ATP synthase complex;0.000189139110567904!GO:0005057;receptor signaling protein activity;0.000213817413489355!GO:0030097;hemopoiesis;0.000222788139078972!GO:0006672;ceramide metabolic process;0.000240007630599251!GO:0006402;mRNA catabolic process;0.00025133412422553!GO:0051427;hormone receptor binding;0.000259745283312255!GO:0005885;Arp2/3 protein complex;0.000274599013105746!GO:0045333;cellular respiration;0.000291362797903371!GO:0022890;inorganic cation transmembrane transporter activity;0.000296188657298366!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000302255064088575!GO:0007040;lysosome organization and biogenesis;0.000312007625323009!GO:0007033;vacuole organization and biogenesis;0.000318814926424023!GO:0007034;vacuolar transport;0.000337550484262525!GO:0007041;lysosomal transport;0.000339604536744509!GO:0007265;Ras protein signal transduction;0.000341829695875026!GO:0006818;hydrogen transport;0.000346059578646377!GO:0051223;regulation of protein transport;0.000352916016776552!GO:0005083;small GTPase regulator activity;0.000366190617880411!GO:0004674;protein serine/threonine kinase activity;0.000401224414987994!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000403513151706986!GO:0008186;RNA-dependent ATPase activity;0.000423116459627571!GO:0000245;spliceosome assembly;0.000423116459627571!GO:0045941;positive regulation of transcription;0.000430885829490198!GO:0044431;Golgi apparatus part;0.000435809631064651!GO:0032940;secretion by cell;0.000439829565481766!GO:0035257;nuclear hormone receptor binding;0.000440716368312713!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000442868362658684!GO:0045321;leukocyte activation;0.000480386929282031!GO:0003729;mRNA binding;0.000480585568927404!GO:0006919;caspase activation;0.000496970095280087!GO:0005798;Golgi-associated vesicle;0.000502706470519982!GO:0043085;positive regulation of catalytic activity;0.000528353147450373!GO:0015992;proton transport;0.000537328284776094!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000537385188707082!GO:0000151;ubiquitin ligase complex;0.000568937466460929!GO:0006350;transcription;0.000600739851333446!GO:0030036;actin cytoskeleton organization and biogenesis;0.000604930146739964!GO:0001726;ruffle;0.000623638510368997!GO:0044262;cellular carbohydrate metabolic process;0.000642700072785504!GO:0009117;nucleotide metabolic process;0.000658268974877936!GO:0045893;positive regulation of transcription, DNA-dependent;0.000693745643870835!GO:0009719;response to endogenous stimulus;0.000730251848781695!GO:0005667;transcription factor complex;0.000793789352792515!GO:0006399;tRNA metabolic process;0.000793789352792515!GO:0031325;positive regulation of cellular metabolic process;0.000849020881719771!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000857306675714925!GO:0004812;aminoacyl-tRNA ligase activity;0.000857306675714925!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000857306675714925!GO:0016740;transferase activity;0.000857524701241211!GO:0065004;protein-DNA complex assembly;0.000870748930145646!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000873294318972947!GO:0043281;regulation of caspase activity;0.000963557463269009!GO:0033157;regulation of intracellular protein transport;0.00102874996766988!GO:0042306;regulation of protein import into nucleus;0.00102874996766988!GO:0043280;positive regulation of caspase activity;0.00105293657220424!GO:0046983;protein dimerization activity;0.00108871265763732!GO:0005741;mitochondrial outer membrane;0.00111520002695757!GO:0045637;regulation of myeloid cell differentiation;0.00112371385531408!GO:0004004;ATP-dependent RNA helicase activity;0.00118937628720104!GO:0051707;response to other organism;0.00127029297256533!GO:0005761;mitochondrial ribosome;0.00128224867257377!GO:0000313;organellar ribosome;0.00128224867257377!GO:0043038;amino acid activation;0.00135119249346241!GO:0006418;tRNA aminoacylation for protein translation;0.00135119249346241!GO:0043039;tRNA aminoacylation;0.00135119249346241!GO:0030149;sphingolipid catabolic process;0.00135177871008165!GO:0016072;rRNA metabolic process;0.00141440072617808!GO:0022415;viral reproductive process;0.00142005926850982!GO:0051090;regulation of transcription factor activity;0.00146265079078924!GO:0060090;molecular adaptor activity;0.00154385946149454!GO:0002521;leukocyte differentiation;0.00154960271844653!GO:0008654;phospholipid biosynthetic process;0.00165844417960226!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00172521316264193!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00176746370857387!GO:0018193;peptidyl-amino acid modification;0.0018115158599595!GO:0033116;ER-Golgi intermediate compartment membrane;0.00189676327354516!GO:0006952;defense response;0.00191724186953071!GO:0006612;protein targeting to membrane;0.00196213371109673!GO:0006364;rRNA processing;0.00196624656896951!GO:0005637;nuclear inner membrane;0.00196777992469048!GO:0006643;membrane lipid metabolic process;0.00197075724165958!GO:0006099;tricarboxylic acid cycle;0.0021809988612115!GO:0046356;acetyl-CoA catabolic process;0.0021809988612115!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0021809988612115!GO:0043623;cellular protein complex assembly;0.00221001297519411!GO:0002274;myeloid leukocyte activation;0.00222206486010526!GO:0016251;general RNA polymerase II transcription factor activity;0.00244441639988527!GO:0009165;nucleotide biosynthetic process;0.00265002187295577!GO:0051187;cofactor catabolic process;0.00274018035000307!GO:0031072;heat shock protein binding;0.00280375314109316!GO:0042990;regulation of transcription factor import into nucleus;0.0028615980753305!GO:0042991;transcription factor import into nucleus;0.0028615980753305!GO:0002757;immune response-activating signal transduction;0.00295468959534217!GO:0048487;beta-tubulin binding;0.0030828165724563!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00314867326377209!GO:0016779;nucleotidyltransferase activity;0.00336481581644721!GO:0048534;hemopoietic or lymphoid organ development;0.00342620401958059!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00362557576560976!GO:0002520;immune system development;0.00375871864851878!GO:0019904;protein domain specific binding;0.00386320723901039!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0039550823866339!GO:0019867;outer membrane;0.00400815476304316!GO:0043087;regulation of GTPase activity;0.00407934262419836!GO:0031968;organelle outer membrane;0.00424408491409423!GO:0006352;transcription initiation;0.00430734652964666!GO:0030029;actin filament-based process;0.00437943274168236!GO:0042802;identical protein binding;0.00458496317070483!GO:0006333;chromatin assembly or disassembly;0.00464279480349843!GO:0031901;early endosome membrane;0.00480851264190132!GO:0000082;G1/S transition of mitotic cell cycle;0.0048870892531036!GO:0016791;phosphoric monoester hydrolase activity;0.00527338230848084!GO:0006084;acetyl-CoA metabolic process;0.00527338230848084!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00527338230848084!GO:0009611;response to wounding;0.0053083380552609!GO:0019377;glycolipid catabolic process;0.00568408100129127!GO:0045454;cell redox homeostasis;0.00568804449504717!GO:0046966;thyroid hormone receptor binding;0.00574466359610061!GO:0042110;T cell activation;0.00574466359610061!GO:0004197;cysteine-type endopeptidase activity;0.00603393533117685!GO:0016301;kinase activity;0.00609367173102833!GO:0002764;immune response-regulating signal transduction;0.00623431910685113!GO:0046649;lymphocyte activation;0.00643684717903587!GO:0043021;ribonucleoprotein binding;0.00646815125848502!GO:0006891;intra-Golgi vesicle-mediated transport;0.00646815125848502!GO:0007259;JAK-STAT cascade;0.00663914192222326!GO:0008383;manganese superoxide dismutase activity;0.00663914192222326!GO:0001315;age-dependent response to reactive oxygen species;0.00663914192222326!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00665240820313325!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00665240820313325!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00665240820313325!GO:0000139;Golgi membrane;0.00711504390958724!GO:0005099;Ras GTPase activator activity;0.00724793771570014!GO:0009109;coenzyme catabolic process;0.00724793771570014!GO:0001817;regulation of cytokine production;0.00746872359085407!GO:0031625;ubiquitin protein ligase binding;0.00790175820274398!GO:0005484;SNAP receptor activity;0.00793774705328643!GO:0016363;nuclear matrix;0.0079950283450754!GO:0001775;cell activation;0.00805872213608731!GO:0043433;negative regulation of transcription factor activity;0.00821146979457792!GO:0032386;regulation of intracellular transport;0.00821146979457792!GO:0004185;serine carboxypeptidase activity;0.00844039965869187!GO:0045045;secretory pathway;0.00844039965869187!GO:0046479;glycosphingolipid catabolic process;0.00844755168560542!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00861478185263636!GO:0006091;generation of precursor metabolites and energy;0.00874503052286956!GO:0006611;protein export from nucleus;0.00885706074292035!GO:0000339;RNA cap binding;0.0089801269942357!GO:0033673;negative regulation of kinase activity;0.00934617811929821!GO:0006469;negative regulation of protein kinase activity;0.00934617811929821!GO:0006665;sphingolipid metabolic process;0.00935023429880451!GO:0003690;double-stranded DNA binding;0.00944051749568143!GO:0051345;positive regulation of hydrolase activity;0.00954095711973372!GO:0051098;regulation of binding;0.0096881918052938!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00972781517869569!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0099098017477681!GO:0001819;positive regulation of cytokine production;0.00995680643031178!GO:0006468;protein amino acid phosphorylation;0.0100511316556886!GO:0003702;RNA polymerase II transcription factor activity;0.0101758286792241!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0104421474760023!GO:0051252;regulation of RNA metabolic process;0.0105273842675566!GO:0030041;actin filament polymerization;0.0105622911009085!GO:0005070;SH3/SH2 adaptor activity;0.0106394381469505!GO:0030218;erythrocyte differentiation;0.0107950993650415!GO:0006607;NLS-bearing substrate import into nucleus;0.010864983046399!GO:0051348;negative regulation of transferase activity;0.010876368786146!GO:0043621;protein self-association;0.010876368786146!GO:0006749;glutathione metabolic process;0.010876368786146!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0111096466556028!GO:0030658;transport vesicle membrane;0.0112482536957196!GO:0005813;centrosome;0.011979674177508!GO:0033367;protein localization in mast cell secretory granule;0.011979674177508!GO:0033365;protein localization in organelle;0.011979674177508!GO:0033371;T cell secretory granule organization and biogenesis;0.011979674177508!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.011979674177508!GO:0033375;protease localization in T cell secretory granule;0.011979674177508!GO:0042629;mast cell granule;0.011979674177508!GO:0033377;maintenance of protein localization in T cell secretory granule;0.011979674177508!GO:0033364;mast cell secretory granule organization and biogenesis;0.011979674177508!GO:0033380;granzyme B localization in T cell secretory granule;0.011979674177508!GO:0033379;maintenance of protease localization in T cell secretory granule;0.011979674177508!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.011979674177508!GO:0033368;protease localization in mast cell secretory granule;0.011979674177508!GO:0033366;protein localization in secretory granule;0.011979674177508!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.011979674177508!GO:0033374;protein localization in T cell secretory granule;0.011979674177508!GO:0006458;'de novo' protein folding;0.0120149516248161!GO:0051084;'de novo' posttranslational protein folding;0.0120149516248161!GO:0008139;nuclear localization sequence binding;0.0120598062457724!GO:0045639;positive regulation of myeloid cell differentiation;0.0123925084243346!GO:0030127;COPII vesicle coat;0.0125974271666918!GO:0012507;ER to Golgi transport vesicle membrane;0.0125974271666918!GO:0030134;ER to Golgi transport vesicle;0.01280397391293!GO:0048500;signal recognition particle;0.0133121255598823!GO:0045449;regulation of transcription;0.0134564990042611!GO:0005048;signal sequence binding;0.0134758740941589!GO:0008637;apoptotic mitochondrial changes;0.0136453093218781!GO:0004860;protein kinase inhibitor activity;0.0138091891295084!GO:0032763;regulation of mast cell cytokine production;0.0146874532419432!GO:0032762;mast cell cytokine production;0.0146874532419432!GO:0045646;regulation of erythrocyte differentiation;0.0148220449642291!GO:0004177;aminopeptidase activity;0.0151343891017018!GO:0030118;clathrin coat;0.0156440350053497!GO:0000785;chromatin;0.0156543348982996!GO:0006354;RNA elongation;0.0157102160742576!GO:0046466;membrane lipid catabolic process;0.0165073485190437!GO:0016311;dephosphorylation;0.0165659090137147!GO:0006351;transcription, DNA-dependent;0.017163320483149!GO:0005152;interleukin-1 receptor antagonist activity;0.0171717993175261!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0171717993175261!GO:0006405;RNA export from nucleus;0.0171740223519921!GO:0051059;NF-kappaB binding;0.0172326208535201!GO:0000209;protein polyubiquitination;0.0172408771903279!GO:0019079;viral genome replication;0.0173768606245027!GO:0032774;RNA biosynthetic process;0.0177366376159119!GO:0000165;MAPKKK cascade;0.0180152503541857!GO:0000278;mitotic cell cycle;0.0183606555782828!GO:0030027;lamellipodium;0.0190073553513354!GO:0030503;regulation of cell redox homeostasis;0.0190253908999836!GO:0050811;GABA receptor binding;0.0193446712170166!GO:0051092;activation of NF-kappaB transcription factor;0.0194268969711628!GO:0030521;androgen receptor signaling pathway;0.0194797952344425!GO:0051329;interphase of mitotic cell cycle;0.0194874888690074!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0201626346703562!GO:0045047;protein targeting to ER;0.0201626346703562!GO:0002573;myeloid leukocyte differentiation;0.0202942303621951!GO:0008286;insulin receptor signaling pathway;0.0203141698479846!GO:0002237;response to molecule of bacterial origin;0.0205991995889417!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0210736086582112!GO:0033549;MAP kinase phosphatase activity;0.0215775063208247!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0215775063208247!GO:0050900;leukocyte migration;0.0215775063208247!GO:0002444;myeloid leukocyte mediated immunity;0.0217330553402197!GO:0003725;double-stranded RNA binding;0.0220710137409454!GO:0019210;kinase inhibitor activity;0.022156636690253!GO:0006914;autophagy;0.022265021119253!GO:0005905;coated pit;0.0223119509497543!GO:0030137;COPI-coated vesicle;0.0226380932187346!GO:0008624;induction of apoptosis by extracellular signals;0.0229195999113902!GO:0019318;hexose metabolic process;0.023006444610203!GO:0008333;endosome to lysosome transport;0.0230569690552142!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.023090368824921!GO:0000287;magnesium ion binding;0.0231536720310765!GO:0030663;COPI coated vesicle membrane;0.023499801995554!GO:0030126;COPI vesicle coat;0.023499801995554!GO:0019843;rRNA binding;0.0235089820464446!GO:0017091;AU-rich element binding;0.0240442642570376!GO:0050779;RNA destabilization;0.0240442642570376!GO:0000289;poly(A) tail shortening;0.0240442642570376!GO:0043022;ribosome binding;0.0241311447249856!GO:0015923;mannosidase activity;0.0241311447249856!GO:0019220;regulation of phosphate metabolic process;0.0245697655921108!GO:0051174;regulation of phosphorus metabolic process;0.0245697655921108!GO:0030518;steroid hormone receptor signaling pathway;0.0247317710266808!GO:0030660;Golgi-associated vesicle membrane;0.0247317710266808!GO:0051325;interphase;0.0248113324159898!GO:0051052;regulation of DNA metabolic process;0.0252079396926171!GO:0035035;histone acetyltransferase binding;0.0253104542336351!GO:0008287;protein serine/threonine phosphatase complex;0.0258620409963499!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0264093947078457!GO:0002467;germinal center formation;0.0264767147662881!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0265068599361817!GO:0002819;regulation of adaptive immune response;0.0265068599361817!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0270948914026883!GO:0048872;homeostasis of number of cells;0.0270948914026883!GO:0005996;monosaccharide metabolic process;0.0271531179357141!GO:0048471;perinuclear region of cytoplasm;0.0272163126222505!GO:0002697;regulation of immune effector process;0.0277003378490919!GO:0045576;mast cell activation;0.0278968740871077!GO:0042092;T-helper 2 type immune response;0.0285112795809547!GO:0032318;regulation of Ras GTPase activity;0.0285651839777098!GO:0043488;regulation of mRNA stability;0.028710119095593!GO:0043487;regulation of RNA stability;0.028710119095593!GO:0042348;NF-kappaB import into nucleus;0.0290333041762371!GO:0042345;regulation of NF-kappaB import into nucleus;0.0290333041762371!GO:0006689;ganglioside catabolic process;0.0290806383857873!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0301246625113502!GO:0005149;interleukin-1 receptor binding;0.0305450861240343!GO:0042613;MHC class II protein complex;0.0306219453463206!GO:0008312;7S RNA binding;0.0308202264597196!GO:0003727;single-stranded RNA binding;0.0308435161745212!GO:0005694;chromosome;0.0313472603963885!GO:0051049;regulation of transport;0.0313472603963885!GO:0002224;toll-like receptor signaling pathway;0.0313472603963885!GO:0002221;pattern recognition receptor signaling pathway;0.0313472603963885!GO:0017166;vinculin binding;0.0316365078763678!GO:0015036;disulfide oxidoreductase activity;0.0321048022186542!GO:0006414;translational elongation;0.0321048022186542!GO:0002252;immune effector process;0.0321048022186542!GO:0019058;viral infectious cycle;0.0321048022186542!GO:0033033;negative regulation of myeloid cell apoptosis;0.0321048022186542!GO:0001803;regulation of type III hypersensitivity;0.0321048022186542!GO:0032733;positive regulation of interleukin-10 production;0.0321048022186542!GO:0033025;regulation of mast cell apoptosis;0.0321048022186542!GO:0001805;positive regulation of type III hypersensitivity;0.0321048022186542!GO:0033023;mast cell homeostasis;0.0321048022186542!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0321048022186542!GO:0033032;regulation of myeloid cell apoptosis;0.0321048022186542!GO:0001802;type III hypersensitivity;0.0321048022186542!GO:0033028;myeloid cell apoptosis;0.0321048022186542!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0321048022186542!GO:0033026;negative regulation of mast cell apoptosis;0.0321048022186542!GO:0033024;mast cell apoptosis;0.0321048022186542!GO:0051101;regulation of DNA binding;0.0328207466593745!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0328447012697069!GO:0051085;chaperone cofactor-dependent protein folding;0.0328495850053438!GO:0048146;positive regulation of fibroblast proliferation;0.0329492388813762!GO:0042221;response to chemical stimulus;0.033173140862282!GO:0030867;rough endoplasmic reticulum membrane;0.0335182572401995!GO:0005669;transcription factor TFIID complex;0.0338676508482727!GO:0030176;integral to endoplasmic reticulum membrane;0.0341565667396344!GO:0015631;tubulin binding;0.0341565667396344!GO:0043300;regulation of leukocyte degranulation;0.0344163385351134!GO:0005815;microtubule organizing center;0.0344643476025949!GO:0006516;glycoprotein catabolic process;0.0347607467456192!GO:0051247;positive regulation of protein metabolic process;0.0348509089358718!GO:0046467;membrane lipid biosynthetic process;0.0351324830995237!GO:0051056;regulation of small GTPase mediated signal transduction;0.0354014190118777!GO:0045792;negative regulation of cell size;0.0354366659647213!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0354757007728593!GO:0006260;DNA replication;0.0355506566657674!GO:0008538;proteasome activator activity;0.0357120024679356!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0357120024679356!GO:0002250;adaptive immune response;0.0357292308667059!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0357292308667059!GO:0032760;positive regulation of tumor necrosis factor production;0.0365414301763782!GO:0051087;chaperone binding;0.0366045913801323!GO:0000118;histone deacetylase complex;0.0370906728192634!GO:0002718;regulation of cytokine production during immune response;0.0372011130613807!GO:0002367;cytokine production during immune response;0.0372011130613807!GO:0002700;regulation of production of molecular mediator of immune response;0.0372011130613807!GO:0050851;antigen receptor-mediated signaling pathway;0.0372770756646428!GO:0051091;positive regulation of transcription factor activity;0.0375098369129781!GO:0045064;T-helper 2 cell differentiation;0.0381255058671771!GO:0051051;negative regulation of transport;0.0383748524227685!GO:0048144;fibroblast proliferation;0.0383892526664708!GO:0048145;regulation of fibroblast proliferation;0.0383892526664708!GO:0045113;regulation of integrin biosynthetic process;0.0384243494234376!GO:0045112;integrin biosynthetic process;0.0384243494234376!GO:0002440;production of molecular mediator of immune response;0.0386306385590158!GO:0006650;glycerophospholipid metabolic process;0.0386306385590158!GO:0006383;transcription from RNA polymerase III promoter;0.0392245013279271!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0392744165159673!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0392744165159673!GO:0051347;positive regulation of transferase activity;0.0394648712769886!GO:0045309;protein phosphorylated amino acid binding;0.0399909093455956!GO:0030258;lipid modification;0.0400399002110434!GO:0030133;transport vesicle;0.0402702464685011!GO:0004722;protein serine/threonine phosphatase activity;0.0403858527449566!GO:0000049;tRNA binding;0.0404461130727179!GO:0003711;transcription elongation regulator activity;0.0409690207179241!GO:0051881;regulation of mitochondrial membrane potential;0.0412288476133804!GO:0042832;defense response to protozoan;0.041607353687646!GO:0043299;leukocyte degranulation;0.0418645323083685!GO:0019752;carboxylic acid metabolic process;0.0420352488872226!GO:0004563;beta-N-acetylhexosaminidase activity;0.042339882725907!GO:0019883;antigen processing and presentation of endogenous antigen;0.0424087057500349!GO:0019783;small conjugating protein-specific protease activity;0.0427443587064001!GO:0006790;sulfur metabolic process;0.0428613222247934!GO:0030308;negative regulation of cell growth;0.0429004829647072!GO:0045746;negative regulation of Notch signaling pathway;0.0429004829647072!GO:0006644;phospholipid metabolic process;0.0429611065847341!GO:0007006;mitochondrial membrane organization and biogenesis;0.0436817479795001!GO:0006007;glucose catabolic process;0.0437764548633388!GO:0008625;induction of apoptosis via death domain receptors;0.0437764548633388!GO:0045603;positive regulation of endothelial cell differentiation;0.0437873012844706!GO:0003746;translation elongation factor activity;0.0448622801904382!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0450543028777677!GO:0002821;positive regulation of adaptive immune response;0.0450543028777677!GO:0001776;leukocyte homeostasis;0.0450761240821616!GO:0006261;DNA-dependent DNA replication;0.0451727182847876!GO:0001562;response to protozoan;0.0452953724887171!GO:0006595;polyamine metabolic process;0.0460235623533071!GO:0030693;caspase activity;0.0467829260374454!GO:0050727;regulation of inflammatory response;0.046786262857504!GO:0031347;regulation of defense response;0.046786262857504!GO:0030384;phosphoinositide metabolic process;0.0480234751671683!GO:0000096;sulfur amino acid metabolic process;0.0482006906989116!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0482449187814072!GO:0031647;regulation of protein stability;0.0483595497672444!GO:0046426;negative regulation of JAK-STAT cascade;0.0485824376551659!GO:0046578;regulation of Ras protein signal transduction;0.048586414417819!GO:0015980;energy derivation by oxidation of organic compounds;0.0490067645145181!GO:0006376;mRNA splice site selection;0.0498272786844305!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0498272786844305!GO:0030377;U-plasminogen activator receptor activity;0.0499082351584666 | |||
|sample_id=11889 | |||
|sample_note= | |||
|sample_sex=female | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue= | |||
|top_motifs=FOSL2:4.6902785454;NFE2:4.61979268202;NFE2L2:4.54452264638;SREBF1,2:4.40119879736;BACH2:4.21943462103;HLF:4.10634670905;FOS_FOS{B,L1}_JUN{B,D}:4.07600414835;PAX2:4.02003416246;CEBPA,B_DDIT3:3.67005889758;SPIB:3.10496987773;ATF5_CREB3:2.99140056776;SPI1:2.93748608411;NFIL3:2.91627638368;HSF1,2:2.71514513826;ATF4:2.71433417407;NFKB1_REL_RELA:2.69121810209;EP300:2.60362271587;NFE2L1:2.58467286591;ATF6:2.58082962164;ETS1,2:2.56981962769;NANOG{mouse}:2.56751522739;CREB1:2.46478047212;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.40626373315;JUN:2.25710919346;FOXP3:2.12019882118;FOXN1:2.103224203;RUNX1..3:2.05606418525;DMAP1_NCOR{1,2}_SMARC:1.99575582945;MAFB:1.9469447056;NR1H4:1.87212716745;IRF1,2:1.54481321857;ATF2:1.49525702352;HIF1A:1.47182570933;PPARG:1.44795070604;PAX3,7:1.35619846525;ELF1,2,4:1.32658055753;STAT2,4,6:1.31833187941;IRF7:1.28179698046;TGIF1:1.13072024598;NFATC1..3:1.08772575177;PAX8:1.08679761047;PDX1:1.00714458112;HOX{A5,B5}:0.957227548022;RXRA_VDR{dimer}:0.881767804365;CDX1,2,4:0.740595333331;ESRRA:0.710704296656;HES1:0.705721828896;HMGA1,2:0.680126686092;PAX1,9:0.63155197494;HMX1:0.621886741688;XBP1:0.571969434491;BPTF:0.537010522063;TBP:0.513276330917;ALX4:0.509797806567;STAT5{A,B}:0.487050143115;SRF:0.458988504299;GLI1..3:0.427790000808;ESR1:0.348533167276;SMAD1..7,9:0.320766499758;AHR_ARNT_ARNT2:0.316800522879;MEF2{A,B,C,D}:0.297340069261;FOX{D1,D2}:0.201957077022;TFCP2:0.136497811792;ZBTB16:0.124286004645;NANOG:0.114681430486;FOXO1,3,4:0.111163370028;NR6A1:0.108737050415;TLX2:0.105388375625;RBPJ:0.0180443027428;EGR1..3:0.0141187794765;ALX1:0.00917056020089;PRDM1:-0.0225031022573;HBP1_HMGB_SSRP1_UBTF:-0.0567698475845;HOXA9_MEIS1:-0.0842405469592;EN1,2:-0.0877055369466;FOX{F1,F2,J1}:-0.106178413518;IKZF1:-0.112457292244;PITX1..3:-0.152612302668;RFX2..5_RFXANK_RFXAP:-0.1537518982;OCT4_SOX2{dimer}:-0.201602763682;POU2F1..3:-0.204449174815;IKZF2:-0.272112609336;GATA4:-0.318240507422;VSX1,2:-0.32401709428;MYB:-0.3758544767;FOXP1:-0.379665068571;NKX3-1:-0.509035328001;POU5F1:-0.63845613442;DBP:-0.721929970537;SOX2:-0.734367293198;FOXL1:-0.752863230306;MZF1:-0.764800730938;NFIX:-0.81643760011;FOXD3:-0.825577958173;SPZ1:-0.888805166047;TBX4,5:-0.897574409706;RFX1:-0.898447335429;REST:-0.91616197267;RXR{A,B,G}:-0.932275014045;HNF4A_NR2F1,2:-0.942644106156;T:-0.942913563449;RORA:-0.967794461017;NHLH1,2:-0.976556761509;RREB1:-0.977890338124;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.978117168403;PRRX1,2:-1.00601045968;PAX6:-1.02808665112;PAX4:-1.03457951366;ZNF238:-1.08745180101;STAT1,3:-1.0934574948;HNF1A:-1.09779381908;SP1:-1.10488129865;FOXM1:-1.15444802414;TAL1_TCF{3,4,12}:-1.15475261118;PATZ1:-1.17783116364;ZNF148:-1.19069192367;ZBTB6:-1.19700710259;MYFfamily:-1.2059964797;TEF:-1.23357891438;GATA6:-1.27699712069;CUX2:-1.30982532903;MED-1{core}:-1.31839553256;ZNF384:-1.33144673967;CRX:-1.33314564736;ZFP161:-1.333463658;TFDP1:-1.36668753129;NKX2-1,4:-1.37317308579;ZIC1..3:-1.37670883671;GZF1:-1.39459436415;NR3C1:-1.40047999304;SOX{8,9,10}:-1.40825451555;MTE{core}:-1.42333645174;TFAP2B:-1.46677254293;HOX{A4,D4}:-1.48479557522;NKX2-3_NKX2-5:-1.48864170473;SOX5:-1.50097247895;TLX1..3_NFIC{dimer}:-1.51188767738;GTF2A1,2:-1.51381526038;NKX6-1,2:-1.51553274742;ELK1,4_GABP{A,B1}:-1.57189864138;TEAD1:-1.63346834536;MAZ:-1.63648157241;E2F1..5:-1.63862050779;POU3F1..4:-1.64716022219;TFAP2{A,C}:-1.66146861124;TP53:-1.69181965482;MTF1:-1.7051921852;ZEB1:-1.71911055167;BREu{core}:-1.71944744501;GTF2I:-1.72203914247;MYOD1:-1.72213499557;TFAP4:-1.72573742258;FOXA2:-1.72586912353;EBF1:-1.73061085618;NKX3-2:-1.87425342336;HIC1:-1.8837945085;POU6F1:-1.89201317951;XCPE1{core}:-1.91488788087;bHLH_family:-1.93484104186;MYBL2:-1.94925598743;AIRE:-1.95101945116;NFY{A,B,C}:-1.97133702331;KLF4:-1.97464394415;ONECUT1,2:-1.97929004494;PBX1:-1.9812769725;NKX2-2,8:-2.03313511267;SNAI1..3:-2.04874358321;PAX5:-2.06948400611;UFEwm:-2.07085400598;HOX{A6,A7,B6,B7}:-2.16210536371;ZNF423:-2.1888229397;GCM1,2:-2.1929878528;ADNP_IRX_SIX_ZHX:-2.29847973177;GFI1B:-2.32772914402;LMO2:-2.43910739945;EVI1:-2.46613174184;NR5A1,2:-2.47256759029;ARID5B:-2.47916361499;TOPORS:-2.49654948958;CDC5L:-2.50087178713;FOX{I1,J2}:-2.53981554005;POU1F1:-2.58608069001;AR:-2.60416097078;SOX17:-2.66743067467;NRF1:-2.67248835068;YY1:-2.87479977144;FOXQ1:-3.04943549255;GFI1:-3.08600428615;LHX3,4:-3.18009974791;ZNF143:-3.32899601652;HAND1,2:-3.62814847899;LEF1_TCF7_TCF7L1,2:-3.73491546257 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11889-125D8;search_select_hide=table117:FF:11889-125D8 | |||
}} | }} |
Latest revision as of 18:27, 4 June 2020
Name: | CD14+ monocytes - treated with B-glucan, donor3 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13495 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13495
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13495
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.129 |
10 | 10 | 0.0184 |
100 | 100 | 0.785 |
101 | 101 | 0.976 |
102 | 102 | 0.769 |
103 | 103 | 0.348 |
104 | 104 | 0.487 |
105 | 105 | 0.1 |
106 | 106 | 7.06507e-4 |
107 | 107 | 0.339 |
108 | 108 | 0.888 |
109 | 109 | 0.259 |
11 | 11 | 0.219 |
110 | 110 | 0.228 |
111 | 111 | 0.0544 |
112 | 112 | 0.382 |
113 | 113 | 0.486 |
114 | 114 | 0.029 |
115 | 115 | 0.146 |
116 | 116 | 0.948 |
117 | 117 | 0.0463 |
118 | 118 | 0.208 |
119 | 119 | 0.142 |
12 | 12 | 0.282 |
120 | 120 | 0.973 |
121 | 121 | 0.378 |
122 | 122 | 0.623 |
123 | 123 | 0.242 |
124 | 124 | 0.495 |
125 | 125 | 0.482 |
126 | 126 | 0.182 |
127 | 127 | 0.387 |
128 | 128 | 0.0411 |
129 | 129 | 0.434 |
13 | 13 | 0.0944 |
130 | 130 | 0.167 |
131 | 131 | 0.811 |
132 | 132 | 0.0465 |
133 | 133 | 0.958 |
134 | 134 | 0.71 |
135 | 135 | 0.942 |
136 | 136 | 0.978 |
137 | 137 | 0.00821 |
138 | 138 | 0.286 |
139 | 139 | 0.0434 |
14 | 14 | 0.518 |
140 | 140 | 0.227 |
141 | 141 | 0.271 |
142 | 142 | 0.32 |
143 | 143 | 0.0383 |
144 | 144 | 0.698 |
145 | 145 | 0.495 |
146 | 146 | 0.449 |
147 | 147 | 0.629 |
148 | 148 | 0.0154 |
149 | 149 | 0.967 |
15 | 15 | 0.174 |
150 | 150 | 0.449 |
151 | 151 | 0.428 |
152 | 152 | 0.19 |
153 | 153 | 0.694 |
154 | 154 | 0.642 |
155 | 155 | 0.808 |
156 | 156 | 0.613 |
157 | 157 | 0.313 |
158 | 158 | 0.0105 |
159 | 159 | 0.453 |
16 | 16 | 0.413 |
160 | 160 | 0.492 |
161 | 161 | 0.474 |
162 | 162 | 0.191 |
163 | 163 | 0.17 |
164 | 164 | 0.0888 |
165 | 165 | 0.202 |
166 | 166 | 0.465 |
167 | 167 | 0.218 |
168 | 168 | 0.339 |
169 | 169 | 0.0092 |
17 | 17 | 0.256 |
18 | 18 | 0.141 |
19 | 19 | 0.538 |
2 | 2 | 0.504 |
20 | 20 | 0.205 |
21 | 21 | 0.679 |
22 | 22 | 0.266 |
23 | 23 | 0.0617 |
24 | 24 | 0.354 |
25 | 25 | 0.382 |
26 | 26 | 0.0502 |
27 | 27 | 0.549 |
28 | 28 | 0.419 |
29 | 29 | 0.277 |
3 | 3 | 0.185 |
30 | 30 | 0.485 |
31 | 31 | 0.817 |
32 | 32 | 0.47 |
33 | 33 | 0.298 |
34 | 34 | 0.686 |
35 | 35 | 0.141 |
36 | 36 | 0.102 |
37 | 37 | 0.0625 |
38 | 38 | 0.349 |
39 | 39 | 0.857 |
4 | 4 | 0.983 |
40 | 40 | 0.133 |
41 | 41 | 0.00444 |
42 | 42 | 0.459 |
43 | 43 | 0.027 |
44 | 44 | 0.75 |
45 | 45 | 0.731 |
46 | 46 | 0.225 |
47 | 47 | 0.692 |
48 | 48 | 0.557 |
49 | 49 | 0.114 |
5 | 5 | 0.278 |
50 | 50 | 0.905 |
51 | 51 | 0.509 |
52 | 52 | 0.413 |
53 | 53 | 0.492 |
54 | 54 | 0.438 |
55 | 55 | 0.703 |
56 | 56 | 0.729 |
57 | 57 | 0.877 |
58 | 58 | 0.166 |
59 | 59 | 0.277 |
6 | 6 | 0.722 |
60 | 60 | 0.0639 |
61 | 61 | 0.683 |
62 | 62 | 0.0967 |
63 | 63 | 0.624 |
64 | 64 | 0.472 |
65 | 65 | 0.242 |
66 | 66 | 0.392 |
67 | 67 | 0.499 |
68 | 68 | 0.965 |
69 | 69 | 0.663 |
7 | 7 | 0.268 |
70 | 70 | 0.0586 |
71 | 71 | 0.0231 |
72 | 72 | 0.33 |
73 | 73 | 0.139 |
74 | 74 | 0.19 |
75 | 75 | 0.0869 |
76 | 76 | 0.141 |
77 | 77 | 0.613 |
78 | 78 | 0.116 |
79 | 79 | 0.844 |
8 | 8 | 0.459 |
80 | 80 | 0.218 |
81 | 81 | 0.421 |
82 | 82 | 0.227 |
83 | 83 | 0.00809 |
84 | 84 | 0.218 |
85 | 85 | 0.0182 |
86 | 86 | 0.0441 |
87 | 87 | 0.552 |
88 | 88 | 0.662 |
89 | 89 | 0.285 |
9 | 9 | 0.463 |
90 | 90 | 0.122 |
91 | 91 | 0.374 |
92 | 92 | 0.315 |
93 | 93 | 0.331 |
94 | 94 | 0.0575 |
95 | 95 | 0.402 |
96 | 96 | 0.419 |
97 | 97 | 0.747 |
98 | 98 | 0.15 |
99 | 99 | 0.0308 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13495
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011102 human CD14-positive monocytes - treated with B-glucan sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000630 (beta-glucan treatment sample)
0011102 (human CD14-positive monocytes - treated with B-glucan sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)