Personal tools

FF:12246-129H5: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005271
|DRA_sample_Accession=CAGE@SAMD00005271
|accession_numbers=CAGE;DRX008077;DRR008949;DRZ000374;DRZ001759
|accession_numbers=CAGE;DRX008077;DRR008949;DRZ000374;DRZ001759;DRZ011724;DRZ013109
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000771
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000771
Line 52: Line 52:
|library_id=CNhs12549
|library_id=CNhs12549
|library_id_phase_based=2:CNhs12549
|library_id_phase_based=2:CNhs12549
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12246
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12246
|name=Eosinophils, donor3
|name=Eosinophils, donor3
|namespace=FANTOM5
|namespace=FANTOM5
Line 59: Line 63:
|profile_rnaseq=
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang=en&db=human&roku_valid=1&rk[]=&order_key=score
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0.344112112272504,0,0,0,0,-0.160318030086386,0,-0.27483329820609,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0.344112112272504,0,0,0,0,0,0,-0.317954060866147,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0868869219907855,0.688224224545008,-0.0969923612426051,0,0.688224224545008,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,1.97343850971561,0,0,1.1015205194501,0,0,0,0,0,0,0,0,0,0,-0.61448815919137,0,0,0,-0.424605141275448,-0.211197402695869,0,0,0,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,1.01203887279121,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.183841515445592,-0.182073772785541,0,0,0,0,0,0
|repeat_enrich_byfamily=0,0,0.344112112272504,0,0,0,0,-0.160318030086386,0,-0.27483329820609,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0.344112112272504,0,0,0,0,0,0,-0.317954060866147,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0868869219907855,0.688224224545008,-0.0969923612426051,0,0.688224224545008,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,1.97343850971561,0,0,1.1015205194501,0,0,0,0,0,0,0,0,0,0,-0.61448815919137,0,0,0,-0.424605141275448,-0.211197402695869,0,0,0,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,1.01203887279121,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.183841515445592,-0.182073772785541,0,0,0,0,0,0
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0,0,0,-0.247178875285564,0,0.835309988441313,-0.143515142523472,0,0,-0.427279086909571,0,0,0,0,0,0,0,0.688224224545008,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,-0.305472230898407,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,-0.270240669334324,0,0.821406690836561,-0.0827201683234173,0,-0.550554284201885,0.641419565652628,0,0,0,-0.354454503316239,-1.01837891339289,0,0,-0.121779851751874,-0.181349618560659,0,0,-0.391044581551635,0,0.0409140910125751,-0.248868050382253,0,-0.162458694256258,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,0.361235627866039,0,0,0,0,0.183611529590951,0,0,-0.373286155956567,-0.350736013296859,0,-0.235970956101792,0,1.33765251319609,0.0492638179958867,0.344394477839173,-0.8780733087367,-0.147401849371139,-0.189981719549847,-0.156132999089005,-0.984021689225405,-0.786272629114012,-0.066188995695217,0.0616579282906102,-0.362955281272291,-1.2314085082871,-0.071124131296459,0,0,-0.0775089264793031,0.619869007224958,0,0,-0.490114714476774,0.491683371914927,-0.67098743647571,0.585133385143211,-0.55122821730723,0.275374391638029,-0.0395325284566706,-0.457436452896595,-0.22427602941584,-0.4215723249037,0,0.688224224545008,0,-0.154049756530428,-0.785912107107322,1.46771902078187,-0.0270248130898286,0.82541874538234,-0.0683442610773682,0,-0.224516579225598,0.0830237166273724,0,0,0.522743288578685,0,0,0,0,0,-0.725319370274434,0.84552065143222,0.455368662989463,0,-0.0697864239052045,-0.193879736255476,0.173857006962565,0,0.541068121064261,-0.146009897457394,0,-0.292633804596236,0,-0.244275879900672,0.245624305682189,-0.164990696339003,-0.422394805391737,-0.0584468268118252,0.946529063057642,0.601015555442995,-0.424605141275448,-0.100715640245218,-0.101364614532639,-0.0881268324752877,0,-0.195320525973372,1.55507815783573,0,-0.583529904229572,0,0.20606385866251,0,0.212150151461783,0,0.505046663795517,-0.54043375147324,0.502996800049616,0.640577001899695,0,-0.156365453547048,-0.788130937773974,0,-0.135723143846782,0,0,-0.150367083334639,-0.697695966512583,-0.211650427864589,0.205122655593309,0,-0.790080158389657,0,0,-0.249460251281842,-0.235476037764389,0,0.0407045856200572,-0.609202914213396,-0.604216041195295,-0.115971073434934,0,0,-0.645700337992725,0,0,-0.60592806381803,0,-0.619783323958633,-0.253326341486756,0,-0.108622809454255,0,0,0.923992753484921,0,0.377328823798344,0,0,-0.249881296598824,-0.116628112990133,0,0.692506397231195,0,0,0,0,0,0,0,0,0,0.0832488799812994,-0.354833330216448,0.688224224545008,0.269394417498846,0,0,0,0,0,0,0,0,-0.904106614274668,-0.0567285480404296,-0.12301741567642,0,0,0,0,-0.215723402553475,0.484987662450284,0,0.556361518047376,0,0,0,0,0.602083234755797,0,0,0,0,-0.057730457053664,-0.52308379245695,0,0,0,-0.27695440160179,0,0,0,0,0.698074225555634,0,0,-0.63193017338638,0,0.807982611174302,-0.0815818795468414,0,0.457584243314486,0.568365924794533,-0.36733416601816,0,0,0.426877092755121,0,0,-1.03594432163325,-0.0823702229656663,0,0,0,0,0.344112112272504,0,0,0,-0.214314512399756,0,0,0,0,0,0.942286174630302,0,0,0,0,0,0.109781138509853,-0.0922240566585104,0,0,0,0,0,0,0,-0.0241060230789031,-0.38288163757355,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0.688224224545008,-0.564807121153884,0,0.942286174630302,0.410862092351494,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.739480716146969,0,0,0,0,0,0,0,-0.27483329820609,0,0,0,0,0.574339850836031,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,-0.318128485982684,0,0,0,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0.344112112272504,0,0,0,0,0,0,0,0,1.30939620719332,0,0,0,-0.061367927484915,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.860968760448957,0,0,0,0,0,0,-0.287976840656709,-0.283220399823148,-0.150150666930912,0,0,0,-0.054385572482455,0,0,-0.191142455090553,0.688224224545008,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0.55076025972505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,0.344112112272504,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,1.38655700216279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0.688224224545008,0,-0.405428866950395,0,0,0,0,0,0,0,0,0,0,-0.0187786402548893,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.550504042515712,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,-0.087428497801853,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,-0.318028478722954,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0.60888945797698,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,0.942286174630302,0,0,0,0,0,1.97343850971561,0,0,0,0,0,0,0,-0.197673298278423,-0.182073772785541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0106119638348943,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344112112272504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285738626926183,0,0,0,0,0,0,0,0,-0.620396418749604,0,0,0,0,0,0,0,0,0,0,0,0,0.344112112272504,0,0,0,0,0,0,0,1.1015205194501,0,0,0,0,0,0,1.97343850971561,0,0.942286174630302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,1.1015205194501,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0.942286174630302,0,0,0,0,0,0,0,0,0,0,0,0.471143087315151,1.12584119091181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393523845438543,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,1.30939620719332,0,0,0,0,0,1.55509715563202,0,0,0,0,0,0,0,0.752727082349705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0.515717123066494,0,0,0.471143087315151,0,0,0,0,0,0,0,0,1.1015205194501,0,0,0,0,0.439426501266768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30527079579741,0,0,0,0,0,0,0.73263518684598,0,0,0.55076025972505,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499379825215864,0,0.688224224545008,0,0,0,0,0,0.55076025972505,0.942286174630302,0,-0.0412500915278073,0,0,0,0,0.942286174630302,0,0,0,0,0,0,0,0,0,0,0,0,1.38501279446239,-0.609241017193738,0,0,-0.0422874684771159,0,-0.189916597972008,-0.000832440615797125,0,0,0,0,0,-0.045193471246235,0,0,0,0,0,0,0,0,0,0,-0.0400762477245316,0,0.471143087315151,-0.137338502423895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02407774558242,0,0,0,0,0,0.65469810359666,0.408152129222042,0,-0.0743782670504465,-0.397074688522015,0,0,-0.0055114785857335,0,0,0,0,0,-0.174992895090299,0.104189483159092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344112112272504,0,0,0,0,-0.0568589461625992,-0.269475635594569,0,-0.378836254350424,0,0,-0.0781053106522872,0,0,0,-0.0959594073735869
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0,0,0,-0.247178875285564,0,0.835309988441313,-0.143515142523472,0,0,-0.427279086909571,0,0,0,0,0,0,0,0.688224224545008,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,-0.305472230898407,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,-0.270240669334324,0,0.821406690836561,-0.0827201683234173,0,-0.550554284201885,0.641419565652628,0,0,0,-0.354454503316239,-1.01837891339289,0,0,-0.121779851751874,-0.181349618560659,0,0,-0.391044581551635,0,0.0409140910125751,-0.248868050382253,0,-0.162458694256258,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,0.361235627866039,0,0,0,0,0.183611529590951,0,0,-0.373286155956567,-0.350736013296859,0,-0.235970956101792,0,1.33765251319609,0.0492638179958867,0.344394477839173,-0.8780733087367,-0.147401849371139,-0.189981719549847,-0.156132999089005,-0.984021689225405,-0.786272629114012,-0.066188995695217,0.0616579282906102,-0.362955281272291,-1.2314085082871,-0.071124131296459,0,0,-0.0775089264793031,0.619869007224958,0,0,-0.490114714476774,0.491683371914927,-0.67098743647571,0.585133385143211,-0.55122821730723,0.275374391638029,-0.0395325284566706,-0.457436452896595,-0.22427602941584,-0.4215723249037,0,0.688224224545008,0,-0.154049756530428,-0.785912107107322,1.46771902078187,-0.0270248130898286,0.82541874538234,-0.0683442610773682,0,-0.224516579225598,0.0830237166273724,0,0,0.522743288578685,0,0,0,0,0,-0.725319370274434,0.84552065143222,0.455368662989463,0,-0.0697864239052045,-0.193879736255476,0.173857006962565,0,0.541068121064261,-0.146009897457394,0,-0.292633804596236,0,-0.244275879900672,0.245624305682189,-0.164990696339003,-0.422394805391737,-0.0584468268118252,0.946529063057642,0.601015555442995,-0.424605141275448,-0.100715640245218,-0.101364614532639,-0.0881268324752877,0,-0.195320525973372,1.55507815783573,0,-0.583529904229572,0,0.20606385866251,0,0.212150151461783,0,0.505046663795517,-0.54043375147324,0.502996800049616,0.640577001899695,0,-0.156365453547048,-0.788130937773974,0,-0.135723143846782,0,0,-0.150367083334639,-0.697695966512583,-0.211650427864589,0.205122655593309,0,-0.790080158389657,0,0,-0.249460251281842,-0.235476037764389,0,0.0407045856200572,-0.609202914213396,-0.604216041195295,-0.115971073434934,0,0,-0.645700337992725,0,0,-0.60592806381803,0,-0.619783323958633,-0.253326341486756,0,-0.108622809454255,0,0,0.923992753484921,0,0.377328823798344,0,0,-0.249881296598824,-0.116628112990133,0,0.692506397231195,0,0,0,0,0,0,0,0,0,0.0832488799812994,-0.354833330216448,0.688224224545008,0.269394417498846,0,0,0,0,0,0,0,0,-0.904106614274668,-0.0567285480404296,-0.12301741567642,0,0,0,0,-0.215723402553475,0.484987662450284,0,0.556361518047376,0,0,0,0,0.602083234755797,0,0,0,0,-0.057730457053664,-0.52308379245695,0,0,0,-0.27695440160179,0,0,0,0,0.698074225555634,0,0,-0.63193017338638,0,0.807982611174302,-0.0815818795468414,0,0.457584243314486,0.568365924794533,-0.36733416601816,0,0,0.426877092755121,0,0,-1.03594432163325,-0.0823702229656663,0,0,0,0,0.344112112272504,0,0,0,-0.214314512399756,0,0,0,0,0,0.942286174630302,0,0,0,0,0,0.109781138509853,-0.0922240566585104,0,0,0,0,0,0,0,-0.0241060230789031,-0.38288163757355,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0.688224224545008,-0.564807121153884,0,0.942286174630302,0.410862092351494,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.739480716146969,0,0,0,0,0,0,0,-0.27483329820609,0,0,0,0,0.574339850836031,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,-0.318128485982684,0,0,0,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0.344112112272504,0,0,0,0,0,0,0,0,1.30939620719332,0,0,0,-0.061367927484915,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.860968760448957,0,0,0,0,0,0,-0.287976840656709,-0.283220399823148,-0.150150666930912,0,0,0,-0.054385572482455,0,0,-0.191142455090553,0.688224224545008,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0.55076025972505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,0.344112112272504,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,1.38655700216279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0.688224224545008,0,-0.405428866950395,0,0,0,0,0,0,0,0,0,0,-0.0187786402548893,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.550504042515712,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,-0.087428497801853,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,-0.318028478722954,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0.60888945797698,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,0.942286174630302,0,0,0,0,0,1.97343850971561,0,0,0,0,0,0,0,-0.197673298278423,-0.182073772785541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0106119638348943,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344112112272504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285738626926183,0,0,0,0,0,0,0,0,-0.620396418749604,0,0,0,0,0,0,0,0,0,0,0,0,0.344112112272504,0,0,0,0,0,0,0,1.1015205194501,0,0,0,0,0,0,1.97343850971561,0,0.942286174630302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,1.1015205194501,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0.942286174630302,0,0,0,0,0,0,0,0,0,0,0,0.471143087315151,1.12584119091181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393523845438543,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,1.30939620719332,0,0,0,0,0,1.55509715563202,0,0,0,0,0,0,0,0.752727082349705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0.515717123066494,0,0,0.471143087315151,0,0,0,0,0,0,0,0,1.1015205194501,0,0,0,0,0.439426501266768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30527079579741,0,0,0,0,0,0,0.73263518684598,0,0,0.55076025972505,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0.688224224545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499379825215864,0,0.688224224545008,0,0,0,0,0,0.55076025972505,0.942286174630302,0,-0.0412500915278073,0,0,0,0,0.942286174630302,0,0,0,0,0,0,0,0,0,0,0,0,1.38501279446239,-0.609241017193738,0,0,-0.0422874684771159,0,-0.189916597972008,-0.000832440615797125,0,0,0,0,0,-0.045193471246235,0,0,0,0,0,0,0,0,0,0,-0.0400762477245316,0,0.471143087315151,-0.137338502423895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02407774558242,0,0,0,0,0,0.65469810359666,0.408152129222042,0,-0.0743782670504465,-0.397074688522015,0,0,-0.0055114785857335,0,0,0,0,0,-0.174992895090299,0.104189483159092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344112112272504,0,0,0,0,-0.0568589461625992,-0.269475635594569,0,-0.378836254350424,0,0,-0.0781053106522872,0,0,0,-0.0959594073735869
Line 97: Line 101:
|top_motifs=CEBPA,B_DDIT3:5.10126137927;ATF5_CREB3:4.66285468322;NFKB1_REL_RELA:4.60958187971;PPARG:4.39864056272;SPI1:4.25991405923;SPIB:4.19212505242;FOX{F1,F2,J1}:4.15378966122;FOXP3:4.05951895385;ETS1,2:4.01516063191;CREB1:3.83075429075;PAX2:3.57943432845;FOXN1:3.57179467978;RUNX1..3:3.5590546625;HLF:3.54301989812;JUN:3.48863680161;ATF6:3.45626796278;NFIL3:3.39359589147;ATF4:3.2476814955;DMAP1_NCOR{1,2}_SMARC:3.16162613981;MAFB:3.11932512536;FOX{D1,D2}:3.04890346315;NFE2L2:2.97865242221;HBP1_HMGB_SSRP1_UBTF:2.94046854552;ALX4:2.91453571975;STAT2,4,6:2.84182982309;PAX8:2.77471986618;RXRA_VDR{dimer}:2.72562953357;EP300:2.5938111326;BPTF:2.54982513222;SREBF1,2:2.51452225647;PAX3,7:2.47396413053;FOXO1,3,4:2.39829034826;FOSL2:2.34526133788;RORA:2.33388380931;ELF1,2,4:2.20218342861;NFE2:2.19938899908;NANOG{mouse}:2.19795651152;TGIF1:2.16138550032;RFX2..5_RFXANK_RFXAP:2.12752788749;IRF7:2.10516113759;ALX1:1.97128853043;NFATC1..3:1.9353967129;BACH2:1.85618755234;IRF1,2:1.76241038461;XBP1:1.68853605051;HIF1A:1.55912036547;ESRRA:1.53737014449;NR5A1,2:1.52582879424;FOXA2:1.44719256477;NFE2L1:1.43695255226;FOS_FOS{B,L1}_JUN{B,D}:1.37150006634;NR1H4:1.29390459695;RBPJ:1.26662165798;TBX4,5:1.13020341183;GATA4:1.10048214291;TAL1_TCF{3,4,12}:1.06445856627;SMAD1..7,9:1.06427048141;SRF:1.04379965931;NKX3-1:1.0329611538;HOXA9_MEIS1:1.00516823277;HMX1:0.979020375367;NKX2-1,4:0.924091087464;STAT1,3:0.828786841283;POU5F1:0.777753264685;TFCP2:0.771429606804;ATF2:0.633833666678;EN1,2:0.492727791303;MZF1:0.47722813423;NFIX:0.409844314605;HMGA1,2:0.363108620488;MYB:0.33209710608;GATA6:0.308764943797;IKZF1:0.305695817959;RFX1:0.296394394348;SOX2:0.288097893349;POU2F1..3:0.221969989888;MYFfamily:0.217228052177;RXR{A,B,G}:0.175908238703;ZBTB16:0.0466982574088;MAZ:0.0205840629544;ZNF148:0.0203943273978;TLX2:-0.0535222558218;T:-0.123696609576;HSF1,2:-0.139994658364;REST:-0.191055143912;MYOD1:-0.226636921529;EBF1:-0.267852579821;PATZ1:-0.288902541289;ZNF423:-0.315190632549;CUX2:-0.349269557776;ZEB1:-0.349616642594;CRX:-0.395411504912;GLI1..3:-0.406945128928;NKX3-2:-0.420110357599;TFAP4:-0.435158656434;EGR1..3:-0.465028789527;SP1:-0.48894065432;RREB1:-0.512475242908;SPZ1:-0.540600918925;NR3C1:-0.555517763583;BREu{core}:-0.579036458069;ZIC1..3:-0.612548250745;VSX1,2:-0.617822087456;FOXD3:-0.670391910349;PRRX1,2:-0.700926360263;TBP:-0.71219825549;NR6A1:-0.764986744901;FOXP1:-0.779178455903;TFAP2{A,C}:-0.785290751346;FOX{I1,J2}:-0.823467184073;FOXL1:-0.854096431143;ADNP_IRX_SIX_ZHX:-0.868111948581;ZFP161:-0.874720148273;HNF1A:-0.930033742285;MTE{core}:-0.933523186343;HOX{A5,B5}:-0.953872744441;PITX1..3:-0.968294027084;HNF4A_NR2F1,2:-1.00399247615;IKZF2:-1.00446943842;LMO2:-1.01371561454;MEF2{A,B,C,D}:-1.03146031718;GTF2I:-1.06646680226;KLF4:-1.07699383938;CDX1,2,4:-1.08012383989;SNAI1..3:-1.08301183491;FOXQ1:-1.09053634069;ESR1:-1.10388922626;NANOG:-1.10573066903;PDX1:-1.11497311759;LEF1_TCF7_TCF7L1,2:-1.1169827603;NHLH1,2:-1.19603417841;TFAP2B:-1.22586589816;HIC1:-1.24931909592;OCT4_SOX2{dimer}:-1.29548689772;MED-1{core}:-1.29649415912;TFDP1:-1.32921344406;TLX1..3_NFIC{dimer}:-1.36452524953;PAX1,9:-1.42319941699;STAT5{A,B}:-1.43084703382;ZNF238:-1.45591959107;TP53:-1.46970381759;PRDM1:-1.50782997566;E2F1..5:-1.54486437574;TEAD1:-1.72398354383;ZBTB6:-1.76861830854;MYBL2:-1.81896234493;SOX{8,9,10}:-1.81904777015;PAX5:-1.8641105756;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.8805359879;SOX5:-1.88372595745;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.90216880276;MTF1:-1.97431223052;EVI1:-1.97905700826;PAX6:-1.99793232466;POU6F1:-2.04003041049;AHR_ARNT_ARNT2:-2.06122015443;NFY{A,B,C}:-2.06746749278;ELK1,4_GABP{A,B1}:-2.12840274966;DBP:-2.13513491954;AR:-2.15439022858;FOXM1:-2.18374366632;GTF2A1,2:-2.20149204586;HES1:-2.21499256163;NKX2-3_NKX2-5:-2.33029774452;HOX{A4,D4}:-2.47718744982;SOX17:-2.50740451613;CDC5L:-2.55613281493;PAX4:-2.56446920979;GZF1:-2.6260009257;PBX1:-2.6688438417;UFEwm:-2.68610422389;GCM1,2:-2.75209498256;NKX2-2,8:-2.76975223416;GFI1B:-2.77919901999;AIRE:-2.80670463621;XCPE1{core}:-2.87277960277;TEF:-3.10819150493;GFI1:-3.16167604203;TOPORS:-3.20513356277;ONECUT1,2:-3.2064433411;HOX{A6,A7,B6,B7}:-3.30477760195;LHX3,4:-3.49445498518;NKX6-1,2:-3.50567002009;NRF1:-3.51651748888;POU1F1:-3.57382925521;ZNF384:-3.57934692523;HAND1,2:-3.62820176159;POU3F1..4:-3.8121508054;bHLH_family:-3.98680299416;ZNF143:-4.49310503307;ARID5B:-4.56504500246;YY1:-5.49046871521
|top_motifs=CEBPA,B_DDIT3:5.10126137927;ATF5_CREB3:4.66285468322;NFKB1_REL_RELA:4.60958187971;PPARG:4.39864056272;SPI1:4.25991405923;SPIB:4.19212505242;FOX{F1,F2,J1}:4.15378966122;FOXP3:4.05951895385;ETS1,2:4.01516063191;CREB1:3.83075429075;PAX2:3.57943432845;FOXN1:3.57179467978;RUNX1..3:3.5590546625;HLF:3.54301989812;JUN:3.48863680161;ATF6:3.45626796278;NFIL3:3.39359589147;ATF4:3.2476814955;DMAP1_NCOR{1,2}_SMARC:3.16162613981;MAFB:3.11932512536;FOX{D1,D2}:3.04890346315;NFE2L2:2.97865242221;HBP1_HMGB_SSRP1_UBTF:2.94046854552;ALX4:2.91453571975;STAT2,4,6:2.84182982309;PAX8:2.77471986618;RXRA_VDR{dimer}:2.72562953357;EP300:2.5938111326;BPTF:2.54982513222;SREBF1,2:2.51452225647;PAX3,7:2.47396413053;FOXO1,3,4:2.39829034826;FOSL2:2.34526133788;RORA:2.33388380931;ELF1,2,4:2.20218342861;NFE2:2.19938899908;NANOG{mouse}:2.19795651152;TGIF1:2.16138550032;RFX2..5_RFXANK_RFXAP:2.12752788749;IRF7:2.10516113759;ALX1:1.97128853043;NFATC1..3:1.9353967129;BACH2:1.85618755234;IRF1,2:1.76241038461;XBP1:1.68853605051;HIF1A:1.55912036547;ESRRA:1.53737014449;NR5A1,2:1.52582879424;FOXA2:1.44719256477;NFE2L1:1.43695255226;FOS_FOS{B,L1}_JUN{B,D}:1.37150006634;NR1H4:1.29390459695;RBPJ:1.26662165798;TBX4,5:1.13020341183;GATA4:1.10048214291;TAL1_TCF{3,4,12}:1.06445856627;SMAD1..7,9:1.06427048141;SRF:1.04379965931;NKX3-1:1.0329611538;HOXA9_MEIS1:1.00516823277;HMX1:0.979020375367;NKX2-1,4:0.924091087464;STAT1,3:0.828786841283;POU5F1:0.777753264685;TFCP2:0.771429606804;ATF2:0.633833666678;EN1,2:0.492727791303;MZF1:0.47722813423;NFIX:0.409844314605;HMGA1,2:0.363108620488;MYB:0.33209710608;GATA6:0.308764943797;IKZF1:0.305695817959;RFX1:0.296394394348;SOX2:0.288097893349;POU2F1..3:0.221969989888;MYFfamily:0.217228052177;RXR{A,B,G}:0.175908238703;ZBTB16:0.0466982574088;MAZ:0.0205840629544;ZNF148:0.0203943273978;TLX2:-0.0535222558218;T:-0.123696609576;HSF1,2:-0.139994658364;REST:-0.191055143912;MYOD1:-0.226636921529;EBF1:-0.267852579821;PATZ1:-0.288902541289;ZNF423:-0.315190632549;CUX2:-0.349269557776;ZEB1:-0.349616642594;CRX:-0.395411504912;GLI1..3:-0.406945128928;NKX3-2:-0.420110357599;TFAP4:-0.435158656434;EGR1..3:-0.465028789527;SP1:-0.48894065432;RREB1:-0.512475242908;SPZ1:-0.540600918925;NR3C1:-0.555517763583;BREu{core}:-0.579036458069;ZIC1..3:-0.612548250745;VSX1,2:-0.617822087456;FOXD3:-0.670391910349;PRRX1,2:-0.700926360263;TBP:-0.71219825549;NR6A1:-0.764986744901;FOXP1:-0.779178455903;TFAP2{A,C}:-0.785290751346;FOX{I1,J2}:-0.823467184073;FOXL1:-0.854096431143;ADNP_IRX_SIX_ZHX:-0.868111948581;ZFP161:-0.874720148273;HNF1A:-0.930033742285;MTE{core}:-0.933523186343;HOX{A5,B5}:-0.953872744441;PITX1..3:-0.968294027084;HNF4A_NR2F1,2:-1.00399247615;IKZF2:-1.00446943842;LMO2:-1.01371561454;MEF2{A,B,C,D}:-1.03146031718;GTF2I:-1.06646680226;KLF4:-1.07699383938;CDX1,2,4:-1.08012383989;SNAI1..3:-1.08301183491;FOXQ1:-1.09053634069;ESR1:-1.10388922626;NANOG:-1.10573066903;PDX1:-1.11497311759;LEF1_TCF7_TCF7L1,2:-1.1169827603;NHLH1,2:-1.19603417841;TFAP2B:-1.22586589816;HIC1:-1.24931909592;OCT4_SOX2{dimer}:-1.29548689772;MED-1{core}:-1.29649415912;TFDP1:-1.32921344406;TLX1..3_NFIC{dimer}:-1.36452524953;PAX1,9:-1.42319941699;STAT5{A,B}:-1.43084703382;ZNF238:-1.45591959107;TP53:-1.46970381759;PRDM1:-1.50782997566;E2F1..5:-1.54486437574;TEAD1:-1.72398354383;ZBTB6:-1.76861830854;MYBL2:-1.81896234493;SOX{8,9,10}:-1.81904777015;PAX5:-1.8641105756;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.8805359879;SOX5:-1.88372595745;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.90216880276;MTF1:-1.97431223052;EVI1:-1.97905700826;PAX6:-1.99793232466;POU6F1:-2.04003041049;AHR_ARNT_ARNT2:-2.06122015443;NFY{A,B,C}:-2.06746749278;ELK1,4_GABP{A,B1}:-2.12840274966;DBP:-2.13513491954;AR:-2.15439022858;FOXM1:-2.18374366632;GTF2A1,2:-2.20149204586;HES1:-2.21499256163;NKX2-3_NKX2-5:-2.33029774452;HOX{A4,D4}:-2.47718744982;SOX17:-2.50740451613;CDC5L:-2.55613281493;PAX4:-2.56446920979;GZF1:-2.6260009257;PBX1:-2.6688438417;UFEwm:-2.68610422389;GCM1,2:-2.75209498256;NKX2-2,8:-2.76975223416;GFI1B:-2.77919901999;AIRE:-2.80670463621;XCPE1{core}:-2.87277960277;TEF:-3.10819150493;GFI1:-3.16167604203;TOPORS:-3.20513356277;ONECUT1,2:-3.2064433411;HOX{A6,A7,B6,B7}:-3.30477760195;LHX3,4:-3.49445498518;NKX6-1,2:-3.50567002009;NRF1:-3.51651748888;POU1F1:-3.57382925521;ZNF384:-3.57934692523;HAND1,2:-3.62820176159;POU3F1..4:-3.8121508054;bHLH_family:-3.98680299416;ZNF143:-4.49310503307;ARID5B:-4.56504500246;YY1:-5.49046871521
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12246-129H5;search_select_hide=table117:FF:12246-129H5
}}
}}

Latest revision as of 18:36, 4 June 2020

Name:Eosinophils, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12549
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeeosinophil
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog number3H100-90-5
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005271
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12549 CAGE DRX008077 DRR008949
Accession ID Hg19

Library idBAMCTSS
CNhs12549 DRZ000374 DRZ001759
Accession ID Hg38

Library idBAMCTSS
CNhs12549 DRZ011724 DRZ013109
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.223
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.599
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.513
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.42
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.688
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.651
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural1.144
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.956
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.552
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast1.385
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.23
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.309
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.529
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory1.399
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.936
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole1.07
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.757
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0608
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.653
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.887
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.742
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.889
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.198
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral1.265
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood1.022
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.942
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral1.102
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12549

Jaspar motifP-value
MA0002.27.64165e-12
MA0003.10.125
MA0004.10.931
MA0006.10.507
MA0007.10.896
MA0009.10.0709
MA0014.10.78
MA0017.10.0892
MA0018.21.36222e-4
MA0019.10.624
MA0024.10.00673
MA0025.18.19943e-6
MA0027.10.836
MA0028.10.193
MA0029.10.873
MA0030.11.32762e-4
MA0031.10.00387
MA0035.20.967
MA0038.10.133
MA0039.20.947
MA0040.10.00164
MA0041.10.132
MA0042.10.0209
MA0043.12.42591e-13
MA0046.10.31
MA0047.20.018
MA0048.10.656
MA0050.10.00124
MA0051.10.132
MA0052.10.769
MA0055.10.328
MA0057.10.231
MA0058.10.767
MA0059.10.739
MA0060.12.13981e-5
MA0061.11.16745e-14
MA0062.20.108
MA0065.20.0135
MA0066.10.00603
MA0067.13.18318e-4
MA0068.10.352
MA0069.10.33
MA0070.10.0173
MA0071.10.264
MA0072.10.793
MA0073.10.151
MA0074.10.189
MA0076.10.279
MA0077.10.303
MA0078.10.46
MA0079.20.666
MA0080.22.19194e-15
MA0081.16.25985e-5
MA0083.10.1
MA0084.10.929
MA0087.10.618
MA0088.10.259
MA0090.10.349
MA0091.10.937
MA0092.10.682
MA0093.10.975
MA0099.25.91061e-15
MA0100.10.949
MA0101.16.90177e-15
MA0102.29.89264e-12
MA0103.10.934
MA0104.20.823
MA0105.12.43383e-15
MA0106.10.483
MA0107.13.8186e-19
MA0108.20.226
MA0111.10.726
MA0112.29.82225e-4
MA0113.10.793
MA0114.10.278
MA0115.10.443
MA0116.17.08686e-4
MA0117.10.0329
MA0119.10.545
MA0122.10.515
MA0124.10.809
MA0125.10.202
MA0131.10.619
MA0135.10.131
MA0136.12.59506e-17
MA0137.20.0689
MA0138.20.744
MA0139.10.905
MA0140.10.567
MA0141.10.0639
MA0142.10.858
MA0143.10.771
MA0144.10.0375
MA0145.10.239
MA0146.10.14
MA0147.10.655
MA0148.10.114
MA0149.10.641
MA0150.15.76977e-13
MA0152.10.231
MA0153.10.124
MA0154.12.46299e-4
MA0155.10.496
MA0156.11.04935e-10
MA0157.10.0261
MA0159.10.0247
MA0160.10.0311
MA0162.10.594
MA0163.17.19641e-4
MA0164.10.899
MA0258.10.0187
MA0259.10.418



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12549

Novel motifP-value
10.162
100.0786
1000.569
1010.743
1020.918
1030.269
1040.563
1050.134
1064.64773e-4
1070.324
1080.583
1090.193
110.228
1100.432
1110.378
1120.306
1130.417
1140.0239
1150.199
1160.917
1170.0617
1180.0966
1190.291
120.423
1200.606
1210.996
1220.666
1230.374
1240.69
1250.183
1260.123
1270.497
1280.0188
1290.517
130.441
1300.685
1310.667
1320.0999
1330.755
1340.485
1350.187
1360.72
1370.00105
1380.239
1390.11
140.309
1400.908
1410.504
1420.518
1430.00668
1440.964
1450.796
1460.679
1470.535
1480.121
1490.531
150.0762
1500.678
1510.268
1520.281
1530.884
1540.906
1550.277
1560.838
1570.961
1580.0124
1590.303
160.47
1600.769
1610.778
1620.0912
1630.413
1640.171
1650.232
1660.842
1670.998
1680.26
1690.0483
170.2
180.122
190.46
20.766
200.606
210.929
220.224
230.00747
240.525
250.325
260.141
270.798
280.339
290.405
30.333
300.768
310.751
320.72
330.39
340.536
350.134
360.157
370.133
380.402
390.885
40.724
400.237
410.00493
420.632
430.0648
440.95
450.403
460.304
470.625
480.634
490.104
50.115
500.877
510.348
520.229
530.301
540.288
550.861
560.609
570.791
580.195
590.0629
60.729
600.0289
610.307
620.0709
630.485
640.491
650.152
660.322
670.574
680.463
690.589
70.218
700.172
710.0587
720.548
730.35
740.0561
750.294
760.218
770.489
780.286
790.993
80.976
800.0268
810.415
820.073
830.0525
840.587
850.0654
860.0358
870.432
880.614
890.148
90.221
900.111
910.445
920.312
930.0778
940.0392
950.378
960.344
970.902
980.124
990.0342



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12549


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000081 (blood cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000094 (granulocyte)
0000771 (eosinophil)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000054 (human eosinophil sample)
0000249 (human eosinophil- heparinase treated sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FF:12246-129H5&oldid=4576978"