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{{f5samples
{{f5samples
|id=FF:12260-130A1
|DRA_sample_Accession=CAGE@SAMD00004711
|name=Lymphatic Endothelial cells response to VEGFC, 00hr00min, biol_rep1 (MM XIX - 1)
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004711
|sample_id=12260
|accession_numbers=CAGE;DRX008589;DRR009461;DRZ000886;DRZ002271;DRZ012236;DRZ013621
|rna_tube_id=130A1
|accession_numbers_RNASeq=sRNA-Seq;DRX037271;DRR041637;DRZ007279
|rna_box=130
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000055,UBERON:0004111,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002049,UBERON:0007798,UBERON:0001473,UBERON:0002465,UBERON:0004535,UBERON:0004536,UBERON:0006558,UBERON:0002193,UBERON:0002405,UBERON:0001009
|rna_position=A1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0002138
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=lymph node
|sample_donor(cell lot)=rep1
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.07
|rna_od260/280=1.95
|sample_cell_type=endothelial cell, lymphatic
|sample_cell_line=
|sample_collaboration=Michael Detmar (Swiss Federal Institute of Technology, ETH Zurich)
|sample_experimental_condition=Lymphatic Endothelial cells response to Vascular endothelial growth factor C
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=9.06
|rna_concentration=0.32
|sample_note=1577
|profile_hcage=CNhs11936,LSID835,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000115,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002078,CL:0002138,CL:0002139,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000055,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000477,UBERON:0000480,UBERON:0001009,UBERON:0001062,UBERON:0001473,UBERON:0002049,UBERON:0002193,UBERON:0002405,UBERON:0002465,UBERON:0004111,UBERON:0004535,UBERON:0004536,UBERON:0006558,UBERON:0007798
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000001,FF:0000350,FF:0000049,FF:0000341,FF:0000344,FF:0000410
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|donor= biol_rep1 (MM XIX - 1)
|expression_enrichment_score=chr21:39870339..39870443,-!p1@ERG!2.14!136.86!ERG;;chr8:55370487..55370503,+!p1@SOX17!2.06!114.05!SOX17;;chr20:62680984..62680999,-!p1@SOX18!1.98!122.42!SOX18;;chr8:10588010..10588030,-!p1@SOX7!1.95!88.64!SOX7;;chr1:214161272..214161322,+!p1@PROX1!1.86!99.76!PROX1;;chr22:19748231..19748317,+!p1@TBX1!1.73!52.41!TBX1;;chr17:6926362..6926377,+!p1@BCL6B!1.68!46.34!BCL6B;;chr3:12330560..12330579,+!p1@PPARG!1.63!47.79!PPARG;;chr18:53068911..53068935,-!p4@TCF4!1.57!40.57!TCF4;;chr17:45933057..45933064,-!p3@SP6!1.50!30.89!SP6;;chr10:94449703..94449718,+!p1@HHEX!1.41!93.84!HHEX;;chr12:96588368..96588394,+!p3@ELK3!1.38!59.91!ELK3;;chr2:177053386..177053402,+!p1@HOXD1!1.28!18.19!HOXD1;;chr16:85932760..85932775,+!p1@IRF8!1.27!17.61!IRF8;;chr8:80679993..80680011,-!p1@HEY1!1.24!23.39!HEY1;;chr17:46682321..46682362,-!p1@HOXB6!1.21!15.16!HOXB6;;chr18:52988979..52988993,-!p18@TCF4!1.15!13.28!TCF4;;chr17:46688334..46688385,-!p1@HOXB7!1.14!18.48!HOXB7;;chr18:53089538..53089578,-!p14@TCF4!1.14!12.85!TCF4;;chr7:26191809..26191890,+!p1@NFE2L3!1.13!61.21!NFE2L3;;chr22:41697497..41697515,+!p2@ZC3H7B!1.08!30.32!ZC3H7B;;chr16:86600426..86600441,+!p1@FOXC2!1.08!27.43!FOXC2;;chr2:176994408..176994492,+!p1@HOXD8!1.06!10.39!HOXD8;;chr18:52989001..52989030,-!p10@TCF4!1.05!11.26!TCF4;;chr1:47695003..47695042,-!p2@TAL1!1.05!10.11!TAL1;;chr18:22932080..22932170,-!p1@ZNF521!1.03!42.01!ZNF521;;chr7:27205106..27205134,-!p2@HOXA9!1.01!9.24!HOXA9;;chr6:85474299..85474324,-!p1@TBX18!1.00!16.31!TBX18;;chr3:128206762..128206781,-!p2@GATA2!0.99!56.30!GATA2;;chr18:52989565..52989623,-!p9@TCF4!0.98!10.97!TCF4;;chr2:176981499..176981522,+!p2@HOXD10!0.98!8.52!HOXD10;;chr18:53177984..53178004,-!p17@TCF4!0.97!8.37!TCF4;;chr19:46801639..46801699,+!p1@HIF3A!0.97!8.37!HIF3A;;chr11:65430554..65430579,-!p3@RELA!0.93!19.63!RELA;;chr10:31288398..31288455,-!p2@ZNF438!0.92!8.52!ZNF438;;chrY:21906594..21906622,-!p1@KDM5D!0.91!7.22!KDM5D;;chr18:52989031..52989079,-!p2@TCF4!0.90!17.04!TCF4;;chr11:128563948..128564003,+!p1@FLI1!0.89!84.74!FLI1;;chr10:31288370..31288393,-!p3@ZNF438!0.89!6.79!ZNF438;;chr7:27196267..27196311,-!p1@HOXA7!0.89!6.79!HOXA7;;chr22:19746969..19746987,+!p2@TBX1!0.89!6.79!TBX1;;chr18:52988952..52988965,-!p23@TCF4!0.89!6.79!TCF4;;chr4:146403912..146403972,+!p5@SMAD1!0.88!8.66!SMAD1;;chr14:74256787..74256858,-!p6@C14orf43!0.86!6.21!C14orf43;;chr1:6479968..6479986,-!p1@HES2!0.86!6.21!HES2;;chr8:106330656..106330684,+!p1@ZFPM2!0.85!16.89!ZFPM2;;chr14:35872962..35873025,-!p3@NFKBIA!0.85!16.02!NFKBIA;;chr3:101546827..101546847,+!p2@NFKBIZ!0.83!8.23!NFKBIZ;;chr22:38598086..38598105,+!p1@MAFF!0.81!63.09!MAFF;;chr6:21597765..21597779,+!p2@SOX4!0.81!47.21!SOX4;;chr2:231280954..231280965,+!p2@SP100!0.81!10.39!SP100;;chr4:185395633..185395651,-!p2@IRF2!0.81!9.10!IRF2;;chr12:80084137..80084165,-!p10@PAWR!0.80!7.07!PAWR;;chr22:41697484..41697496,+!p3@ZC3H7B!0.80!6.93!ZC3H7B;;chr7:27192185..27192209,-!p1@HOXA3!0.80!5.34!HOXA3;;chr22:38597987..38598021,+!p2@MAFF!0.79!33.93!MAFF;;chr10:94449675..94449694,+!p2@HHEX!0.79!14.73!HHEX;;chr20:50721803..50721857,-!p2@ZFP64!0.79!8.52!ZFP64;;chr6:85473156..85473210,-!p2@TBX18!0.78!6.21!TBX18;;chr7:27205136..27205164,-!p1@HOXA9!0.77!4.91!HOXA9;;chr17:46690839..46690884,-!p1@HOXB8!0.77!4.91!HOXB8;;chr1:23885981..23886002,-!p1@ID3!0.76!920.34!ID3;;chr20:30193083..30193098,+!p1@ID1!0.76!421.69!ID1;;chr10:63809013..63809041,+!p3@ARID5B!0.76!29.16!ARID5B;;chr8:80680024..80680046,-!p2@HEY1!0.76!5.49!HEY1;;chr19:13213399..13213414,-!p6@LYL1!0.75!4.62!LYL1;;chr2:46524537..46524553,+!p1@EPAS1!0.73!486.08!EPAS1;;chr1:209979467..209979494,-!p1@IRF6!0.73!5.05!IRF6;;chr6:21593973..21593988,+!p1@SOX4!0.72!173.82!SOX4;;chr4:103422499..103422632,+!p1@NFKB1!0.72!99.18!NFKB1;;chr19:13213511..13213545,-!p2@LYL1!0.72!4.62!LYL1;;chr5:131826457..131826514,-!p1@IRF1!0.71!183.92!IRF1;;chr19:42636586..42636607,-!p1@POU2F2!0.71!12.42!POU2F2;;chr2:85980951..85981004,+!p1@ATOH8!0.71!7.07!ATOH8;;chr18:53089493..53089517,-!p15@TCF4!0.71!4.19!TCF4;;chr15:96874012..96874042,+!p2@NR2F2!0.70!40.57!NR2F2;;chr10:104154246..104154347,+!p3@NFKB2!0.70!27.43!NFKB2;;chr4:4861385..4861398,+!p1@MSX1!0.70!13.14!MSX1;;chr13:37494365..37494381,-!p1@SMAD9!0.70!7.51!SMAD9;;chr10:104155659..104155676,+!p4@NFKB2!0.70!5.20!NFKB2;;chr9:16705069..16705086,-!p3@BNC2!0.70!4.04!BNC2;;chr14:35873947..35873965,-!p1@NFKBIA!0.69!286.86!NFKBIA;;chr8:48650715..48650735,-!p1@CEBPD!0.68!559.56!CEBPD;;chr15:96873984..96873999,+!p3@NR2F2!0.68!32.05!NR2F2;;chr10:104155480..104155534,+!p2@NFKB2!0.68!28.15!NFKB2;;chr20:50159198..50159299,-!p1@NFATC2!0.68!5.77!NFATC2;;chr20:48599506..48599526,+!p1@SNAI1!0.67!27.29!SNAI1;;chr4:146402843..146402864,+!p3@SMAD1!0.67!7.94!SMAD1;;chr6:34204921..34204939,+!p3@HMGA1!0.66!125.89!HMGA1;;chr10:35484804..35484902,+!p2@CREM!0.66!15.45!CREM;;chr3:12329397..12329433,+!p2@PPARG!0.66!9.10!PPARG;;chr4:146404119..146404158,+!p9@SMAD1!0.66!3.61!SMAD1;;chr12:80084018..80084035,-!p17@PAWR!0.66!3.61!PAWR;;chr5:92918919..92918942,+!p1@NR2F1!0.65!17.76!NR2F1;;chr2:46524897..46524911,+!p2@EPAS1!0.65!10.97!EPAS1;;chr12:80084167..80084197,-!p5@PAWR!0.65!9.10!PAWR;;chr7:27224911..27224922,-!p5@HOXA11!0.65!3.46!HOXA11;;chr18:22932004..22932021,-!p2@ZNF521!0.65!3.46!ZNF521;;chr6:130339710..130339745,+!p1@L3MBTL3!0.64!31.04!L3MBTL3;;chr4:185395590..185395627,-!p3@IRF2!0.64!4.33!IRF2;;chr1:47697539..47697573,-!p3@TAL1!0.64!3.32!TAL1;;chr10:94451574..94451587,+!p6@HHEX!0.64!3.32!HHEX;;chr2:28615716..28615733,+!p1@FOSL2!0.63!183.35!FOSL2;;chr11:128392273..128392308,-!p2@ETS1!0.63!15.88!ETS1;;chr6:44233252..44233296,-!p1@NFKBIE!0.62!37.54!NFKBIE;;chr12:11802753..11802834,+!p2@ETV6!0.62!18.19!ETV6;;chr19:49865646..49865718,-!p1@TEAD2!0.61!31.18!TEAD2;;chr8:55370720..55370733,+!p2@SOX17!0.61!3.03!SOX17;;chr4:103446567..103446592,+!p15@NFKB1!0.61!3.03!NFKB1;;chr18:53068940..53068951,-!p21@TCF4!0.61!3.03!TCF4;;chr18:53089453..53089482,-!p11@TCF4!0.61!3.03!TCF4;;chr22:41697520..41697613,+!p1@ZC3H7B!0.60!203.41!ZC3H7B;;chr9:14314566..14314618,-!p1@NFIB!0.60!43.60!NFIB;;chr18:53089521..53089533,-!p22@TCF4!0.59!2.89!TCF4;;chr18:53177899..53177918,-!p33@TCF4!0.59!2.89!TCF4;;chr17:3571863..3571881,-!p1@TAX1BP3!0.58!248.89!TAX1BP3;;chr6:126240380..126240430,+!p2@NCOA7!0.58!8.37!NCOA7;;chr18:53257001..53257015,-!p5@TCF4!0.57!5.20!TCF4;;chr3:71355163..71355209,-!p5@FOXP1!0.57!4.04!FOXP1;;chr2:176987441..176987454,+!p1@HOXD9!0.57!2.74!HOXD9;;chr2:176987463..176987479,+!p2@HOXD9!0.57!2.74!HOXD9;;chr2:177001290..177001315,+!p1@HOXD3!0.57!2.74!HOXD3;;chr18:22931979..22931992,-!p3@ZNF521!0.57!2.74!ZNF521;;chr1:214161328..214161348,+!p2@PROX1!0.57!2.74!PROX1;;chr12:80084303..80084332,-!p1@PAWR!0.56!18.91!PAWR;;chr5:88179195..88179224,-!p3@MEF2C!0.56!4.62!MEF2C;;chr14:75988771..75988826,+!p1@BATF!0.56!3.75!BATF;;chr18:53068982..53068993,-!p20@TCF4!0.56!2.60!TCF4;;chr5:71803177..71803255,-!p1@ZNF366!0.56!2.60!ZNF366;;chr7:27195867..27195893,-!p3@HOXA7!0.56!2.60!HOXA7;;chr15:90544532..90544563,+!p1@ZNF710!0.55!5.92!ZNF710;;chr19:19303794..19303805,+!p5@RFXANK!0.55!3.03!RFXANK;;chr5:88178983..88179012,-!p1@MEF2C!0.54!24.25!MEF2C;;chr11:65430535..65430549,-!p4@RELA!0.54!3.03!RELA;;chr11:128457446..128457461,-!p4@ETS1!0.54!2.45!ETS1;;chr11:65429891..65429915,-!p7@RELA!0.54!2.45!RELA;;chr16:86600870..86600921,+!p2@FOXC2!0.54!2.45!FOXC2;;chr1:214161358..214161377,+!p3@PROX1!0.54!2.45!PROX1;;chr10:63809106..63809127,+!p1@ARID5B!0.53!41.14!ARID5B;;chr9:14314131..14314147,-!p2@NFIB!0.53!16.89!NFIB;;chr3:12329358..12329393,+!p3@PPARG!0.53!6.93!PPARG;;chr2:85981222..85981259,+!p2@ATOH8!0.53!4.48!ATOH8;;chr19:13213662..13213686,-!p1@LYL1!0.53!3.90!LYL1;;chr10:63808979..63808990,+!p8@ARID5B!0.53!2.74!ARID5B;;chr3:101568349..101568365,+!p1@NFKBIZ!0.52!159.24!NFKBIZ;;chr12:3069037..3069119,+!p2@TEAD4!0.52!9.82!TEAD4;;chr7:27224842..27224872,-!p1@HOXA11!0.52!2.31!HOXA11;;chr17:47892398..47892407,+!p2@KAT7!0.52!2.31!KAT7;;chr19:45252008..45252024,+!p2@BCL3!0.51!9.24!BCL3;;chr9:14083467..14083483,-!p4@NFIB!0.51!6.64!NFIB;;chr9:14082760..14082775,-!p6@NFIB!0.51!4.19!NFIB;;chr2:85980919..85980942,+!p4@ATOH8!0.51!2.45!ATOH8;;chr15:96876966..96877017,+!p12@NR2F2!0.50!3.46!NR2F2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.49!34.50!ZC3H12A;;chr1:161736140..161736151,+!p3@ATF6!0.49!8.23!ATF6;;chr15:96874145..96874166,+!p7@NR2F2!0.49!4.76!NR2F2;;chr11:65686802..65686818,+!p6@DRAP1!0.49!4.19!DRAP1;;chr19:57106647..57106686,+!p1@ZNF71!0.48!17.76!ZNF71;;chr9:35732647..35732678,+!p2@CREB3!0.48!14.87!CREB3;;chr15:96874216..96874236,+!p13@NR2F2!0.48!3.61!NR2F2;;chr15:83953397..83953425,-!p1@BNC1!0.48!2.45!BNC1;;chr18:53069219..53069253,-!p35@TCF4!0.48!2.02!TCF4;;chrY:2803415..2803468,+!p1@ZFY!0.48!2.02!ZFY;;chr22:19747040..19747054,+!p3@TBX1!0.48!2.02!TBX1;;chr15:96873921..96873946,+!p1@NR2F2!0.47!75.50!NR2F2;;chr1:151032860..151032918,+!p1@MLLT11!0.47!31.18!MLLT11;;chr19:45504688..45504782,+!p1@RELB!0.47!15.59!RELB;;chr12:27485823..27485868,+!p2@ARNTL2!0.47!10.25!ARNTL2;;chr12:66218255..66218304,+!p3@HMGA2!0.47!6.64!HMGA2;;chr2:46524878..46524891,+!p3@EPAS1!0.47!4.04!EPAS1;;chr2:46602901..46602926,+!p7@EPAS1!0.47!2.89!EPAS1;;chr22:38598042..38598052,+!p4@MAFF!0.46!3.46!MAFF;;chr18:6414884..6414942,-!p1@L3MBTL4!0.46!2.60!L3MBTL4;;chr17:46688310..46688323,-!p4@HOXB7!0.46!1.88!HOXB7;;chr1:201979703..201979721,+!p2@ELF3!0.46!1.88!ELF3;;chr1:47696918..47696935,-!p6@TAL1!0.46!1.88!TAL1;;chr6:85474198..85474212,-!p3@TBX18!0.46!1.88!TBX18;;chr7:27190547..27190591,-!p1@HOXA6!0.46!1.88!HOXA6;;chr7:27205089..27205096,-!p4@HOXA9!0.46!1.88!HOXA9;;chr22:38598057..38598071,+!p3@MAFF!0.45!5.34!MAFF;;chr15:96873861..96873872,+!p9@NR2F2!0.45!4.62!NR2F2;;chr8:73921136..73921151,+!p2@TERF1!0.45!3.18!TERF1;;chr4:185395191..185395226,-!p4@IRF2!0.45!2.89!IRF2;;chr14:35872926..35872951,-!p4@NFKBIA!0.45!2.89!NFKBIA;;chr17:7590797..7590815,-!p1@TP53!0.44!109.43!TP53;;chr12:80085255..80085284,-!p9@PAWR!0.44!2.89!PAWR;;chr19:49864746..49864780,-!p2@TEAD2!0.44!2.74!TEAD2;;chr6:21597283..21597312,+!p7@SOX4!0.44!2.60!SOX4;;chr8:1063306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Line 66: Line 44:
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/Lymphatic%2520Endothelial%2520cells%2520response%2520to%2520VEGFC%252c%252000hr00min%252c%2520biol_rep1%2520%2528MM%2520XIX%2520-%25201%2529.CNhs11936.12260-130A1.hg38.nobarcode.ctss.bed.gz
|id=FF:12260-130A1
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|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10062.CCGTCC.12260
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|name=Lymphatic Endothelial cells response to VEGFC
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|rna_box=130
|rna_catalog_number=
|rna_concentration=0.32
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.07
|rna_od260/280=1.95
|rna_position=A1
|rna_rin=
|rna_sample_type=
|rna_tube_id=130A1
|rna_weight_ug=9.06
|rnaseq_library_id=SRhi10062.CCGTCC
|sample_age=
|sample_category=time courses
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=endothelial cell, lymphatic
|sample_collaboration=Michael Detmar (Swiss Federal Institute of Technology, ETH Zurich)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=rep1
|sample_ethnicity=
|sample_experimental_condition=Lymphatic Endothelial cells response to Vascular endothelial growth factor C
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.55134817813177e-230!GO:0005737;cytoplasm;5.36625650521118e-196!GO:0043226;organelle;6.87655227198861e-178!GO:0043229;intracellular organelle;2.65276083204737e-177!GO:0043231;intracellular membrane-bound organelle;5.17496614008942e-177!GO:0043227;membrane-bound organelle;8.52129741017523e-177!GO:0044444;cytoplasmic part;1.48834949927423e-142!GO:0044422;organelle part;2.54545344735843e-132!GO:0044446;intracellular organelle part;8.05437855432883e-131!GO:0032991;macromolecular complex;5.3739256456244e-93!GO:0005515;protein binding;4.56389746099347e-86!GO:0030529;ribonucleoprotein complex;1.51285386115165e-82!GO:0044238;primary metabolic process;3.23277796707228e-82!GO:0044237;cellular metabolic process;2.00132493717682e-81!GO:0043170;macromolecule metabolic process;5.63087404530535e-73!GO:0005739;mitochondrion;2.52319514291798e-71!GO:0043233;organelle lumen;2.51310528604376e-68!GO:0031974;membrane-enclosed lumen;2.51310528604376e-68!GO:0003723;RNA binding;1.28189451432735e-65!GO:0044428;nuclear part;1.52730666750552e-63!GO:0005634;nucleus;1.61263911839859e-61!GO:0005840;ribosome;5.73424188680134e-53!GO:0019538;protein metabolic process;5.73424188680134e-53!GO:0031090;organelle membrane;1.98877725254713e-51!GO:0006412;translation;4.82609067401655e-50!GO:0044429;mitochondrial part;3.33107840019361e-47!GO:0003735;structural constituent of ribosome;6.80329066195674e-47!GO:0043234;protein complex;8.50469374019417e-47!GO:0044260;cellular macromolecule metabolic process;5.73061068956378e-46!GO:0044267;cellular protein metabolic process;7.55179213816773e-46!GO:0016043;cellular component organization and biogenesis;1.42872469122605e-45!GO:0031967;organelle envelope;1.07378495705286e-42!GO:0031975;envelope;2.8053634776707e-42!GO:0015031;protein transport;7.57057733090491e-42!GO:0033036;macromolecule localization;1.62801073248442e-41!GO:0005829;cytosol;3.2969664046829e-41!GO:0006396;RNA processing;8.29917513573951e-41!GO:0033279;ribosomal subunit;1.64962601681956e-40!GO:0045184;establishment of protein localization;3.98558433100141e-39!GO:0031981;nuclear lumen;4.77651763961647e-39!GO:0009058;biosynthetic process;7.14046282398252e-39!GO:0008104;protein localization;1.01225182978942e-38!GO:0044249;cellular biosynthetic process;2.26306817062021e-37!GO:0043283;biopolymer metabolic process;3.27917127854909e-37!GO:0009059;macromolecule biosynthetic process;2.4341657751836e-36!GO:0046907;intracellular transport;1.10583472951394e-33!GO:0010467;gene expression;1.50035347355096e-33!GO:0016071;mRNA metabolic process;1.51589518669217e-32!GO:0005740;mitochondrial envelope;1.15185292122548e-31!GO:0065003;macromolecular complex assembly;1.72546246494107e-31!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.18515226088752e-30!GO:0008380;RNA splicing;1.42168408061536e-30!GO:0031966;mitochondrial membrane;6.31550217486086e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.07662773384136e-29!GO:0006996;organelle organization and biogenesis;6.13122839088294e-29!GO:0043228;non-membrane-bound organelle;2.12632389210635e-28!GO:0043232;intracellular non-membrane-bound organelle;2.12632389210635e-28!GO:0006886;intracellular protein transport;2.25334908188412e-28!GO:0006397;mRNA processing;2.61846669596784e-28!GO:0022607;cellular component assembly;1.29647194658424e-27!GO:0019866;organelle inner membrane;1.56481243092604e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.7391259157191e-27!GO:0005743;mitochondrial inner membrane;1.66044848678543e-25!GO:0005654;nucleoplasm;1.09767421908713e-23!GO:0005681;spliceosome;1.41480930690817e-23!GO:0051649;establishment of cellular localization;5.42198529494634e-23!GO:0044445;cytosolic part;5.86645079434783e-23!GO:0006119;oxidative phosphorylation;7.30001690143047e-23!GO:0051641;cellular localization;1.3712525040268e-22!GO:0000166;nucleotide binding;1.50757086465101e-22!GO:0015935;small ribosomal subunit;1.72681970372173e-21!GO:0006259;DNA metabolic process;1.39866712170878e-20!GO:0015934;large ribosomal subunit;5.23824540178139e-20!GO:0044455;mitochondrial membrane part;6.64797474346516e-20!GO:0012505;endomembrane system;1.19582084764998e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.20002289932827e-19!GO:0005783;endoplasmic reticulum;1.27465951203074e-19!GO:0016462;pyrophosphatase activity;1.27465951203074e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;1.58320112473106e-19!GO:0044451;nucleoplasm part;1.68192637822406e-19!GO:0017111;nucleoside-triphosphatase activity;3.81989373413473e-19!GO:0031980;mitochondrial lumen;3.98919160111024e-19!GO:0005759;mitochondrial matrix;3.98919160111024e-19!GO:0006457;protein folding;1.25786393356094e-18!GO:0000502;proteasome complex (sensu Eukaryota);2.47563594194082e-18!GO:0051186;cofactor metabolic process;2.1891379840526e-17!GO:0016874;ligase activity;3.37103720674727e-17!GO:0008134;transcription factor binding;4.30834963043154e-17!GO:0005746;mitochondrial respiratory chain;4.49943812215998e-17!GO:0032553;ribonucleotide binding;1.09287181234509e-16!GO:0032555;purine ribonucleotide binding;1.09287181234509e-16!GO:0007049;cell cycle;1.13391012736884e-16!GO:0022618;protein-RNA complex assembly;1.25006168453239e-16!GO:0005730;nucleolus;1.28914190370581e-16!GO:0017076;purine nucleotide binding;1.3410056250967e-16!GO:0048770;pigment granule;2.45997877460495e-16!GO:0042470;melanosome;2.45997877460495e-16!GO:0044265;cellular macromolecule catabolic process;4.369348366181e-16!GO:0043285;biopolymer catabolic process;4.52822031983031e-16!GO:0044432;endoplasmic reticulum part;4.88242106230281e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.26746746996281e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.33324406448945e-16!GO:0006512;ubiquitin cycle;6.47787457501177e-16!GO:0006915;apoptosis;7.89667624410112e-16!GO:0012501;programmed cell death;8.42307641800445e-16!GO:0016192;vesicle-mediated transport;1.72106724685098e-15!GO:0005794;Golgi apparatus;2.71806950651063e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.77899268568104e-15!GO:0019941;modification-dependent protein catabolic process;3.81323073462016e-15!GO:0043632;modification-dependent macromolecule catabolic process;3.81323073462016e-15!GO:0005761;mitochondrial ribosome;4.49650353491751e-15!GO:0000313;organellar ribosome;4.49650353491751e-15!GO:0003676;nucleic acid binding;5.86111782274884e-15!GO:0044257;cellular protein catabolic process;5.95137209209292e-15!GO:0009057;macromolecule catabolic process;6.66720683923449e-15!GO:0006511;ubiquitin-dependent protein catabolic process;8.42444284677232e-15!GO:0050136;NADH dehydrogenase (quinone) activity;9.72887998172425e-15!GO:0003954;NADH dehydrogenase activity;9.72887998172425e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.72887998172425e-15!GO:0030163;protein catabolic process;1.85893565153206e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.57512797732721e-14!GO:0044248;cellular catabolic process;5.7855919169116e-14!GO:0008219;cell death;9.0824960822996e-14!GO:0016265;death;9.0824960822996e-14!GO:0006605;protein targeting;9.4043294333097e-14!GO:0006732;coenzyme metabolic process;1.48663637817639e-13!GO:0008135;translation factor activity, nucleic acid binding;1.62700570898715e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.80621167868154e-13!GO:0043412;biopolymer modification;1.92884511060983e-13!GO:0051082;unfolded protein binding;2.05812499217278e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.39694606526862e-13!GO:0042773;ATP synthesis coupled electron transport;2.39694606526862e-13!GO:0030964;NADH dehydrogenase complex (quinone);6.60072040504058e-13!GO:0045271;respiratory chain complex I;6.60072040504058e-13!GO:0005747;mitochondrial respiratory chain complex I;6.60072040504058e-13!GO:0022402;cell cycle process;8.96462237206701e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.38564948070773e-12!GO:0048193;Golgi vesicle transport;1.69147101404672e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;2.86165359608991e-12!GO:0000375;RNA splicing, via transesterification reactions;2.86165359608991e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.86165359608991e-12!GO:0006464;protein modification process;3.62181153099254e-12!GO:0005635;nuclear envelope;4.48087361505736e-12!GO:0016070;RNA metabolic process;4.71716654850945e-12!GO:0000278;mitotic cell cycle;7.72661464414245e-12!GO:0005524;ATP binding;1.14850269297455e-11!GO:0032559;adenyl ribonucleotide binding;1.44463906392311e-11!GO:0042254;ribosome biogenesis and assembly;1.6176391244953e-11!GO:0006974;response to DNA damage stimulus;1.84813755616455e-11!GO:0030554;adenyl nucleotide binding;2.17471581947337e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.29827299981659e-11!GO:0005789;endoplasmic reticulum membrane;4.84497456247576e-11!GO:0009259;ribonucleotide metabolic process;5.29524070523262e-11!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.37553677653436e-11!GO:0042981;regulation of apoptosis;7.01022279793736e-11!GO:0003712;transcription cofactor activity;9.33705995509102e-11!GO:0006163;purine nucleotide metabolic process;9.57175002517806e-11!GO:0043067;regulation of programmed cell death;1.06428988950554e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.06428988950554e-10!GO:0043687;post-translational protein modification;1.08133101780739e-10!GO:0008639;small protein conjugating enzyme activity;1.24613327625806e-10!GO:0006413;translational initiation;1.4983496374249e-10!GO:0003743;translation initiation factor activity;1.60940174238956e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.74333242801148e-10!GO:0009150;purine ribonucleotide metabolic process;1.74333242801148e-10!GO:0016604;nuclear body;1.85493545566045e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.86331365265955e-10!GO:0031965;nuclear membrane;1.94509619907161e-10!GO:0050794;regulation of cellular process;2.02344308563832e-10!GO:0004842;ubiquitin-protein ligase activity;2.46449841369765e-10!GO:0044453;nuclear membrane part;2.63261007592825e-10!GO:0006461;protein complex assembly;2.7315582045391e-10!GO:0008565;protein transporter activity;3.48198825039456e-10!GO:0009055;electron carrier activity;5.09353402387947e-10!GO:0006164;purine nucleotide biosynthetic process;6.7124134907164e-10!GO:0019787;small conjugating protein ligase activity;8.37243629693266e-10!GO:0005773;vacuole;1.10483755191918e-09!GO:0042623;ATPase activity, coupled;1.15740268559467e-09!GO:0009260;ribonucleotide biosynthetic process;1.16498040757782e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.21582591493112e-09!GO:0006446;regulation of translational initiation;1.28627351104147e-09!GO:0048523;negative regulation of cellular process;1.40352367352166e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.81923922034174e-09!GO:0003924;GTPase activity;2.5820611985308e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.70468738947674e-09!GO:0009056;catabolic process;2.88876283098497e-09!GO:0051726;regulation of cell cycle;3.17101895948218e-09!GO:0009141;nucleoside triphosphate metabolic process;3.44062045618663e-09!GO:0006913;nucleocytoplasmic transport;3.6394075226077e-09!GO:0043069;negative regulation of programmed cell death;3.66967174425349e-09!GO:0006916;anti-apoptosis;3.72763880493202e-09!GO:0006281;DNA repair;4.20376159625617e-09!GO:0043066;negative regulation of apoptosis;4.42916283845495e-09!GO:0000074;regulation of progression through cell cycle;4.60348270786428e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.80566863741244e-09!GO:0005793;ER-Golgi intermediate compartment;4.92956649068998e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.98814756325494e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.98814756325494e-09!GO:0016887;ATPase activity;5.76796377105363e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.77410638939851e-09!GO:0051188;cofactor biosynthetic process;6.86328588872284e-09!GO:0015986;ATP synthesis coupled proton transport;8.08586994639815e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.08586994639815e-09!GO:0051169;nuclear transport;8.48143632544555e-09!GO:0009060;aerobic respiration;9.59579713826526e-09!GO:0009719;response to endogenous stimulus;9.60810100530785e-09!GO:0005694;chromosome;1.0965908372179e-08!GO:0005768;endosome;1.78741807752511e-08!GO:0016881;acid-amino acid ligase activity;1.80796530683467e-08!GO:0000323;lytic vacuole;1.84586540835927e-08!GO:0005764;lysosome;1.84586540835927e-08!GO:0005525;GTP binding;1.93374700444847e-08!GO:0051246;regulation of protein metabolic process;1.94549365935629e-08!GO:0046034;ATP metabolic process;2.02870218819046e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.30734963392608e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.30734963392608e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.42964462263455e-08!GO:0051276;chromosome organization and biogenesis;2.77043470428783e-08!GO:0000087;M phase of mitotic cell cycle;3.11885943021826e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;3.14521847764775e-08!GO:0007067;mitosis;3.33657558805617e-08!GO:0006366;transcription from RNA polymerase II promoter;3.36274724155597e-08!GO:0048519;negative regulation of biological process;3.42632666787522e-08!GO:0004386;helicase activity;3.64790309640204e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.34918650731384e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.34918650731384e-08!GO:0005643;nuclear pore;4.35025415509284e-08!GO:0044427;chromosomal part;4.73254599863438e-08!GO:0006260;DNA replication;5.03070134625161e-08!GO:0045333;cellular respiration;5.15281383027019e-08!GO:0016607;nuclear speck;5.97120837031403e-08!GO:0031988;membrane-bound vesicle;6.20169356563809e-08!GO:0016023;cytoplasmic membrane-bound vesicle;6.33051616965632e-08!GO:0065002;intracellular protein transport across a membrane;6.59837506765108e-08!GO:0051301;cell division;7.49403143066722e-08!GO:0009117;nucleotide metabolic process;8.2601049870067e-08!GO:0030532;small nuclear ribonucleoprotein complex;8.77261245525774e-08!GO:0006399;tRNA metabolic process;9.42946028857156e-08!GO:0006323;DNA packaging;9.71096838070204e-08!GO:0008026;ATP-dependent helicase activity;1.17931859723812e-07!GO:0006364;rRNA processing;1.23754171007306e-07!GO:0019829;cation-transporting ATPase activity;1.34809262191503e-07!GO:0017038;protein import;1.44326547890279e-07!GO:0005788;endoplasmic reticulum lumen;1.50141173299052e-07!GO:0006754;ATP biosynthetic process;1.52921185173624e-07!GO:0006753;nucleoside phosphate metabolic process;1.52921185173624e-07!GO:0022403;cell cycle phase;1.90850519892918e-07!GO:0016072;rRNA metabolic process;1.98416035875577e-07!GO:0065004;protein-DNA complex assembly;2.25229709760723e-07!GO:0004298;threonine endopeptidase activity;2.39500711998963e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.55542886614539e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.58608017562023e-07!GO:0006099;tricarboxylic acid cycle;3.26686585372125e-07!GO:0046356;acetyl-CoA catabolic process;3.26686585372125e-07!GO:0032561;guanyl ribonucleotide binding;3.26686585372125e-07!GO:0019001;guanyl nucleotide binding;3.26686585372125e-07!GO:0009108;coenzyme biosynthetic process;3.40097671009257e-07!GO:0007243;protein kinase cascade;4.39689876200409e-07!GO:0006888;ER to Golgi vesicle-mediated transport;4.43650288578152e-07!GO:0006793;phosphorus metabolic process;4.72081722886045e-07!GO:0006796;phosphate metabolic process;4.72081722886045e-07!GO:0007005;mitochondrion organization and biogenesis;4.99952806382442e-07!GO:0046930;pore complex;5.52792651181366e-07!GO:0031982;vesicle;5.87376754002582e-07!GO:0050789;regulation of biological process;7.72543754956679e-07!GO:0048522;positive regulation of cellular process;7.72543754956679e-07!GO:0006084;acetyl-CoA metabolic process;8.93705214674539e-07!GO:0006333;chromatin assembly or disassembly;9.03559910191528e-07!GO:0031410;cytoplasmic vesicle;9.71383917401949e-07!GO:0005770;late endosome;9.78309213032186e-07!GO:0000785;chromatin;1.08456580151759e-06!GO:0016779;nucleotidyltransferase activity;1.10251974432494e-06!GO:0030120;vesicle coat;1.11725795625067e-06!GO:0030662;coated vesicle membrane;1.11725795625067e-06!GO:0016491;oxidoreductase activity;1.27894376807149e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.29479492509032e-06!GO:0050657;nucleic acid transport;1.36118098295646e-06!GO:0051236;establishment of RNA localization;1.36118098295646e-06!GO:0050658;RNA transport;1.36118098295646e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.47918215290154e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.47918215290154e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.47918215290154e-06!GO:0006403;RNA localization;1.4943133621788e-06!GO:0051187;cofactor catabolic process;1.51880641876362e-06!GO:0016310;phosphorylation;1.84471251716356e-06!GO:0048475;coated membrane;2.02351346851326e-06!GO:0030117;membrane coat;2.02351346851326e-06!GO:0003697;single-stranded DNA binding;2.37853605496528e-06!GO:0045259;proton-transporting ATP synthase complex;2.41279812566374e-06!GO:0043038;amino acid activation;2.49426442289958e-06!GO:0006418;tRNA aminoacylation for protein translation;2.49426442289958e-06!GO:0043039;tRNA aminoacylation;2.49426442289958e-06!GO:0016787;hydrolase activity;3.88219695662953e-06!GO:0031252;leading edge;3.90860091447459e-06!GO:0006752;group transfer coenzyme metabolic process;4.21810975663725e-06!GO:0032446;protein modification by small protein conjugation;4.69519235349788e-06!GO:0044431;Golgi apparatus part;4.79795796841219e-06!GO:0009109;coenzyme catabolic process;5.1440761699413e-06!GO:0044440;endosomal part;5.20053785688873e-06!GO:0010008;endosome membrane;5.20053785688873e-06!GO:0030036;actin cytoskeleton organization and biogenesis;5.29365899960696e-06!GO:0016740;transferase activity;5.67629605089724e-06!GO:0019899;enzyme binding;5.94019421852149e-06!GO:0016567;protein ubiquitination;6.13507141095312e-06!GO:0005667;transcription factor complex;7.02061376001537e-06!GO:0019867;outer membrane;7.24777730124526e-06!GO:0016044;membrane organization and biogenesis;7.4890503951808e-06!GO:0031968;organelle outer membrane;7.4890503951808e-06!GO:0015630;microtubule cytoskeleton;7.79100085569717e-06!GO:0000245;spliceosome assembly;8.47047776073962e-06!GO:0006950;response to stress;8.90673761238643e-06!GO:0003713;transcription coactivator activity;9.70654075282774e-06!GO:0003724;RNA helicase activity;1.17213754704403e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.17839876980691e-05!GO:0006334;nucleosome assembly;1.26883862500744e-05!GO:0045454;cell redox homeostasis;1.39853236581383e-05!GO:0005769;early endosome;1.67521657073301e-05!GO:0005741;mitochondrial outer membrane;1.70076472867047e-05!GO:0000151;ubiquitin ligase complex;1.81192656445354e-05!GO:0043566;structure-specific DNA binding;1.81216004105307e-05!GO:0007264;small GTPase mediated signal transduction;1.84976838738571e-05!GO:0000279;M phase;1.8695091477943e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.10023801086662e-05!GO:0031497;chromatin assembly;2.38426998868378e-05!GO:0003714;transcription corepressor activity;2.48786986183262e-05!GO:0006613;cotranslational protein targeting to membrane;2.69193433480029e-05!GO:0043623;cellular protein complex assembly;3.00346098556174e-05!GO:0051170;nuclear import;3.07334919586735e-05!GO:0005762;mitochondrial large ribosomal subunit;3.07334919586735e-05!GO:0000315;organellar large ribosomal subunit;3.07334919586735e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.42320770794312e-05!GO:0051028;mRNA transport;3.4353540548058e-05!GO:0030029;actin filament-based process;3.56787285472927e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.71567032256609e-05!GO:0019843;rRNA binding;3.74623212330869e-05!GO:0005798;Golgi-associated vesicle;4.05345653850335e-05!GO:0051087;chaperone binding;4.8687719063716e-05!GO:0016853;isomerase activity;5.01003949367901e-05!GO:0045786;negative regulation of progression through cell cycle;5.03343576372585e-05!GO:0030867;rough endoplasmic reticulum membrane;5.49000343005905e-05!GO:0009967;positive regulation of signal transduction;5.82445949746827e-05!GO:0000314;organellar small ribosomal subunit;6.64418128027168e-05!GO:0005763;mitochondrial small ribosomal subunit;6.64418128027168e-05!GO:0006606;protein import into nucleus;7.04442981339913e-05!GO:0007010;cytoskeleton organization and biogenesis;7.0748910765501e-05!GO:0016564;transcription repressor activity;9.44605609004011e-05!GO:0009165;nucleotide biosynthetic process;0.000104169565111892!GO:0065009;regulation of a molecular function;0.000107774071181282!GO:0000139;Golgi membrane;0.000118771553505282!GO:0006091;generation of precursor metabolites and energy;0.000124372992324605!GO:0008654;phospholipid biosynthetic process;0.000134062405915847!GO:0008186;RNA-dependent ATPase activity;0.00014120906315171!GO:0016563;transcription activator activity;0.000147899095820397!GO:0003899;DNA-directed RNA polymerase activity;0.000155095904744545!GO:0048471;perinuclear region of cytoplasm;0.000168779685956212!GO:0005774;vacuolar membrane;0.000191194352725573!GO:0043021;ribonucleoprotein binding;0.000197025204644105!GO:0065007;biological regulation;0.000201625232916272!GO:0005813;centrosome;0.000203030191363663!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000236573712760616!GO:0033116;ER-Golgi intermediate compartment membrane;0.000240040521556101!GO:0016568;chromatin modification;0.000241344373702203!GO:0016859;cis-trans isomerase activity;0.000241374993198104!GO:0048518;positive regulation of biological process;0.00024784420527695!GO:0051427;hormone receptor binding;0.000249417971780761!GO:0051329;interphase of mitotic cell cycle;0.000256894468087037!GO:0051789;response to protein stimulus;0.000273507017980452!GO:0006986;response to unfolded protein;0.000273507017980452!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000321717444820249!GO:0016126;sterol biosynthetic process;0.000322185537886925!GO:0042802;identical protein binding;0.000322185537886925!GO:0008047;enzyme activator activity;0.00033870502831584!GO:0015980;energy derivation by oxidation of organic compounds;0.000348859121542175!GO:0051325;interphase;0.000407187783628407!GO:0004004;ATP-dependent RNA helicase activity;0.000408266521392305!GO:0005905;coated pit;0.000431504643102428!GO:0005885;Arp2/3 protein complex;0.000466056534646618!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000467925946925143!GO:0043681;protein import into mitochondrion;0.000512651355063036!GO:0035257;nuclear hormone receptor binding;0.000512651355063036!GO:0005048;signal sequence binding;0.000524352060125523!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000535977320422837!GO:0005765;lysosomal membrane;0.000535977320422837!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000564424278481027!GO:0031324;negative regulation of cellular metabolic process;0.000564424278481027!GO:0008250;oligosaccharyl transferase complex;0.000612875909525891!GO:0006414;translational elongation;0.000620157111226531!GO:0006612;protein targeting to membrane;0.000629244049141992!GO:0044437;vacuolar part;0.00069102637354998!GO:0030133;transport vesicle;0.000697986135343035!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000702726774365601!GO:0005815;microtubule organizing center;0.000732887859870901!GO:0008361;regulation of cell size;0.00075676373702031!GO:0008092;cytoskeletal protein binding;0.000806756409353885!GO:0006626;protein targeting to mitochondrion;0.000818629919578928!GO:0016049;cell growth;0.000823871996477157!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000891516605145632!GO:0051920;peroxiredoxin activity;0.000966001477042487!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000995317798843301!GO:0015399;primary active transmembrane transporter activity;0.000995317798843301!GO:0009892;negative regulation of metabolic process;0.00111345391597867!GO:0008632;apoptotic program;0.00114012706143952!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00114012706143952!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00116751786593828!GO:0007265;Ras protein signal transduction;0.00118549669750882!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00136883456401131!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00136883456401131!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00136883456401131!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00136883456401131!GO:0001558;regulation of cell growth;0.00153675983729189!GO:0004576;oligosaccharyl transferase activity;0.00167092110615361!GO:0031902;late endosome membrane;0.00167092110615361!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00181738072941437!GO:0030880;RNA polymerase complex;0.00181738072941437!GO:0048487;beta-tubulin binding;0.00191208682303992!GO:0018196;peptidyl-asparagine modification;0.00193895494815528!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00193895494815528!GO:0031072;heat shock protein binding;0.00196626032210299!GO:0006695;cholesterol biosynthetic process;0.00199859589156651!GO:0005819;spindle;0.00202435354118582!GO:0030027;lamellipodium;0.00206156978528762!GO:0007006;mitochondrial membrane organization and biogenesis;0.0021145210514846!GO:0015992;proton transport;0.00217287440566204!GO:0051168;nuclear export;0.00219658305127088!GO:0048468;cell development;0.00224059339675522!GO:0006818;hydrogen transport;0.00227105890563456!GO:0006891;intra-Golgi vesicle-mediated transport;0.00236203402006386!GO:0006897;endocytosis;0.00236305646657913!GO:0010324;membrane invagination;0.00236305646657913!GO:0009966;regulation of signal transduction;0.00253178420250055!GO:0007242;intracellular signaling cascade;0.00260545903962367!GO:0000059;protein import into nucleus, docking;0.00276923575553876!GO:0043488;regulation of mRNA stability;0.00298502526826133!GO:0043487;regulation of RNA stability;0.00298502526826133!GO:0006402;mRNA catabolic process;0.00300926943595768!GO:0001726;ruffle;0.00308638631129907!GO:0006839;mitochondrial transport;0.00317808855238738!GO:0030663;COPI coated vesicle membrane;0.00322899458986408!GO:0030126;COPI vesicle coat;0.00322899458986408!GO:0019222;regulation of metabolic process;0.00324426088121967!GO:0005791;rough endoplasmic reticulum;0.00338466056184391!GO:0007040;lysosome organization and biogenesis;0.00355794051188158!GO:0003729;mRNA binding;0.00358290029418222!GO:0006401;RNA catabolic process;0.00366970930469697!GO:0006650;glycerophospholipid metabolic process;0.00370183909590082!GO:0006979;response to oxidative stress;0.00377682774986135!GO:0016197;endosome transport;0.00386134746673763!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00396361565032422!GO:0000428;DNA-directed RNA polymerase complex;0.00396361565032422!GO:0008139;nuclear localization sequence binding;0.00405253471187555!GO:0044262;cellular carbohydrate metabolic process;0.00409721939709867!GO:0005096;GTPase activator activity;0.00413948822389306!GO:0030658;transport vesicle membrane;0.00428773498861925!GO:0051101;regulation of DNA binding;0.004292484541441!GO:0008154;actin polymerization and/or depolymerization;0.0044368019692787!GO:0046474;glycerophospholipid biosynthetic process;0.00444985548063963!GO:0048500;signal recognition particle;0.00444985548063963!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0045580862444573!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0045580862444573!GO:0000786;nucleosome;0.00463462504593623!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00467079412619829!GO:0006509;membrane protein ectodomain proteolysis;0.00467079412619829!GO:0033619;membrane protein proteolysis;0.00467079412619829!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00467079412619829!GO:0051252;regulation of RNA metabolic process;0.00467079412619829!GO:0043065;positive regulation of apoptosis;0.00469745715789945!GO:0030041;actin filament polymerization;0.00496057550201596!GO:0050790;regulation of catalytic activity;0.00497005808029181!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0049754628045173!GO:0015002;heme-copper terminal oxidase activity;0.0049754628045173!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0049754628045173!GO:0004129;cytochrome-c oxidase activity;0.0049754628045173!GO:0030659;cytoplasmic vesicle membrane;0.00516519124289293!GO:0046483;heterocycle metabolic process;0.00520460378964584!GO:0046467;membrane lipid biosynthetic process;0.00536334857746974!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00539067015127718!GO:0006383;transcription from RNA polymerase III promoter;0.00540918567921463!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00557010701773116!GO:0022890;inorganic cation transmembrane transporter activity;0.00566683720776687!GO:0043068;positive regulation of programmed cell death;0.00573095225217073!GO:0005637;nuclear inner membrane;0.00574673002880342!GO:0017166;vinculin binding;0.00580701217873067!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00580701217873067!GO:0005684;U2-dependent spliceosome;0.0058746513051167!GO:0006643;membrane lipid metabolic process;0.00594449119889224!GO:0046489;phosphoinositide biosynthetic process;0.00601419617426357!GO:0006261;DNA-dependent DNA replication;0.00651714191359952!GO:0030521;androgen receptor signaling pathway;0.00655137312131676!GO:0005869;dynactin complex;0.00655137312131676!GO:0030118;clathrin coat;0.00655137312131676!GO:0030137;COPI-coated vesicle;0.00691590695436946!GO:0005657;replication fork;0.00700143691143282!GO:0003684;damaged DNA binding;0.00700389461824867!GO:0040008;regulation of growth;0.00700389461824867!GO:0043492;ATPase activity, coupled to movement of substances;0.00712674685060628!GO:0015631;tubulin binding;0.00722699339747604!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00764104266567195!GO:0008383;manganese superoxide dismutase activity;0.00770390996635341!GO:0001315;age-dependent response to reactive oxygen species;0.00770390996635341!GO:0005874;microtubule;0.00797669415196472!GO:0030134;ER to Golgi transport vesicle;0.00799802634335551!GO:0048660;regulation of smooth muscle cell proliferation;0.00821364329332824!GO:0051098;regulation of binding;0.00824523557031904!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00840009628023194!GO:0008283;cell proliferation;0.00846100535920425!GO:0045045;secretory pathway;0.00848975348830248!GO:0007051;spindle organization and biogenesis;0.00851169202777751!GO:0007033;vacuole organization and biogenesis;0.00851949630214379!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0088943864496398!GO:0051059;NF-kappaB binding;0.00902651416760092!GO:0006352;transcription initiation;0.00913321582203563!GO:0008033;tRNA processing;0.00917652846255199!GO:0008610;lipid biosynthetic process;0.0092645842021215!GO:0030660;Golgi-associated vesicle membrane;0.009409967216228!GO:0006740;NADPH regeneration;0.009409967216228!GO:0006098;pentose-phosphate shunt;0.009409967216228!GO:0008637;apoptotic mitochondrial changes;0.00944200230409706!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00944200230409706!GO:0045047;protein targeting to ER;0.00944200230409706!GO:0016363;nuclear matrix;0.00968437256874355!GO:0007162;negative regulation of cell adhesion;0.00990129175348989!GO:0008312;7S RNA binding;0.0104270990785008!GO:0051540;metal cluster binding;0.0104270990785008!GO:0051536;iron-sulfur cluster binding;0.0104270990785008!GO:0030127;COPII vesicle coat;0.0104270990785008!GO:0012507;ER to Golgi transport vesicle membrane;0.0104270990785008!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0105857169871581!GO:0044452;nucleolar part;0.0106422713464608!GO:0030833;regulation of actin filament polymerization;0.01064400503947!GO:0001944;vasculature development;0.0106888303969883!GO:0044433;cytoplasmic vesicle part;0.0107780149804814!GO:0006778;porphyrin metabolic process;0.0113952606948267!GO:0033013;tetrapyrrole metabolic process;0.0113952606948267!GO:0043284;biopolymer biosynthetic process;0.0114061812500958!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0114209255194437!GO:0016481;negative regulation of transcription;0.0115504589684228!GO:0008094;DNA-dependent ATPase activity;0.0122299408099227!GO:0007034;vacuolar transport;0.01230238172798!GO:0006595;polyamine metabolic process;0.0126723521947566!GO:0050811;GABA receptor binding;0.0126852242317472!GO:0030132;clathrin coat of coated pit;0.0129638337999072!GO:0050662;coenzyme binding;0.0129638337999072!GO:0006417;regulation of translation;0.0129638337999072!GO:0005083;small GTPase regulator activity;0.0132909061519727!GO:0000082;G1/S transition of mitotic cell cycle;0.0135056553842736!GO:0012506;vesicle membrane;0.0135456981786948!GO:0015036;disulfide oxidoreductase activity;0.0135456981786948!GO:0003711;transcription elongation regulator activity;0.0138164427372022!GO:0008180;signalosome;0.0139283374577583!GO:0016251;general RNA polymerase II transcription factor activity;0.0141490862110685!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0144896241090093!GO:0022407;regulation of cell-cell adhesion;0.0146820272591861!GO:0007050;cell cycle arrest;0.0149231421289131!GO:0003746;translation elongation factor activity;0.0149582211553757!GO:0005832;chaperonin-containing T-complex;0.0150580564561658!GO:0043022;ribosome binding;0.0150850460521639!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0150850460521639!GO:0007266;Rho protein signal transduction;0.0152525450591217!GO:0006611;protein export from nucleus;0.0158404419859341!GO:0008064;regulation of actin polymerization and/or depolymerization;0.015874841463596!GO:0051128;regulation of cellular component organization and biogenesis;0.015874841463596!GO:0033673;negative regulation of kinase activity;0.0159069935404763!GO:0006469;negative regulation of protein kinase activity;0.0159069935404763!GO:0040011;locomotion;0.0159521113537858!GO:0030176;integral to endoplasmic reticulum membrane;0.0162600200309776!GO:0022408;negative regulation of cell-cell adhesion;0.0171555379719262!GO:0003678;DNA helicase activity;0.0171762602184652!GO:0000075;cell cycle checkpoint;0.0175890723104066!GO:0007088;regulation of mitosis;0.017715340815745!GO:0007021;tubulin folding;0.017775117357593!GO:0031901;early endosome membrane;0.0180087638712973!GO:0008538;proteasome activator activity;0.0181552009376495!GO:0051270;regulation of cell motility;0.0182912971496763!GO:0006672;ceramide metabolic process;0.0183285394060549!GO:0051348;negative regulation of transferase activity;0.0183524446071684!GO:0035258;steroid hormone receptor binding;0.0189699604533236!GO:0006497;protein amino acid lipidation;0.0190931165927634!GO:0003690;double-stranded DNA binding;0.0191567719456773!GO:0006289;nucleotide-excision repair;0.0192691026952242!GO:0000049;tRNA binding;0.0195705760259581!GO:0043433;negative regulation of transcription factor activity;0.0198692052037517!GO:0007041;lysosomal transport;0.0201769186454355!GO:0051539;4 iron, 4 sulfur cluster binding;0.0201952363520946!GO:0008234;cysteine-type peptidase activity;0.0205972745010643!GO:0046426;negative regulation of JAK-STAT cascade;0.0208116738060038!GO:0046519;sphingoid metabolic process;0.0210301567511497!GO:0030695;GTPase regulator activity;0.0212822475948886!GO:0001568;blood vessel development;0.021558267446521!GO:0000209;protein polyubiquitination;0.0220253942316872!GO:0030119;AP-type membrane coat adaptor complex;0.0220571793413826!GO:0042168;heme metabolic process;0.0225050434771038!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.022600870052378!GO:0040012;regulation of locomotion;0.0226479330605565!GO:0006644;phospholipid metabolic process;0.0227799456465663!GO:0032508;DNA duplex unwinding;0.0228402143170913!GO:0032392;DNA geometric change;0.0228402143170913!GO:0030518;steroid hormone receptor signaling pathway;0.0230132678997182!GO:0030100;regulation of endocytosis;0.0237281935667188!GO:0008320;protein transmembrane transporter activity;0.024049148668628!GO:0016272;prefoldin complex;0.0243342098401312!GO:0016408;C-acyltransferase activity;0.0248008530006672!GO:0035035;histone acetyltransferase binding;0.0251021334283925!GO:0006749;glutathione metabolic process;0.0251021334283925!GO:0031625;ubiquitin protein ligase binding;0.0251798577473744!GO:0045941;positive regulation of transcription;0.0251987746149968!GO:0006917;induction of apoptosis;0.0252043232853073!GO:0043281;regulation of caspase activity;0.0257151018056297!GO:0031124;mRNA 3'-end processing;0.0258158766742226!GO:0048659;smooth muscle cell proliferation;0.0263149068513599!GO:0001953;negative regulation of cell-matrix adhesion;0.0268504996827737!GO:0047485;protein N-terminus binding;0.0270324714298476!GO:0003756;protein disulfide isomerase activity;0.0275874048563085!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0275874048563085!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0279018915125533!GO:0006405;RNA export from nucleus;0.0279466267534996!GO:0005669;transcription factor TFIID complex;0.027957937440537!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0283256454447028!GO:0004197;cysteine-type endopeptidase activity;0.0283634375465825!GO:0006302;double-strand break repair;0.0286771239716387!GO:0019752;carboxylic acid metabolic process;0.0287525704495513!GO:0030384;phosphoinositide metabolic process;0.0290525299782388!GO:0001836;release of cytochrome c from mitochondria;0.029423414276492!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0295578169709437!GO:0006082;organic acid metabolic process;0.0298064222290327!GO:0045926;negative regulation of growth;0.0299077401935979!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0306265333573827!GO:0033043;regulation of organelle organization and biogenesis;0.0306265333573827!GO:0005092;GDP-dissociation inhibitor activity;0.0310830967656144!GO:0030032;lamellipodium biogenesis;0.0311410904034409!GO:0004177;aminopeptidase activity;0.0311703358185294!GO:0012502;induction of programmed cell death;0.0323843212823902!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0326107229531185!GO:0032940;secretion by cell;0.0329080494834946!GO:0046966;thyroid hormone receptor binding;0.0330831335857784!GO:0006376;mRNA splice site selection;0.0333174948017477!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0333174948017477!GO:0000339;RNA cap binding;0.0333579294366661!GO:0031529;ruffle organization and biogenesis;0.0334680741688022!GO:0030155;regulation of cell adhesion;0.0336037040721975!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0339198604268435!GO:0030131;clathrin adaptor complex;0.0340408156313744!GO:0006220;pyrimidine nucleotide metabolic process;0.0345922491508917!GO:0046822;regulation of nucleocytoplasmic transport;0.036235300955533!GO:0004674;protein serine/threonine kinase activity;0.0363437397523337!GO:0042158;lipoprotein biosynthetic process;0.0363437397523337!GO:0006268;DNA unwinding during replication;0.0364687950544739!GO:0005784;translocon complex;0.0365089131334172!GO:0006378;mRNA polyadenylation;0.0367096308635033!GO:0006779;porphyrin biosynthetic process;0.0374465923274976!GO:0033014;tetrapyrrole biosynthetic process;0.0374465923274976!GO:0042585;germinal vesicle;0.0375673007374129!GO:0033559;unsaturated fatty acid metabolic process;0.0379341026612349!GO:0006636;unsaturated fatty acid biosynthetic process;0.0379341026612349!GO:0009615;response to virus;0.0380561185716422!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.038377025357746!GO:0006516;glycoprotein catabolic process;0.0386891235478784!GO:0045893;positive regulation of transcription, DNA-dependent;0.0391313844401054!GO:0032984;macromolecular complex disassembly;0.0399593928088802!GO:0005099;Ras GTPase activator activity;0.0400362482931043!GO:0051287;NAD binding;0.0402373716875541!GO:0045792;negative regulation of cell size;0.0411465920032271!GO:0004527;exonuclease activity;0.041170243366739!GO:0019206;nucleoside kinase activity;0.0420272599552563!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.042072094610242!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.042072094610242!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.042072094610242!GO:0042987;amyloid precursor protein catabolic process;0.042072094610242!GO:0030125;clathrin vesicle coat;0.0428440148877938!GO:0030665;clathrin coated vesicle membrane;0.0428440148877938!GO:0004532;exoribonuclease activity;0.043258653890098!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.043258653890098!GO:0030865;cortical cytoskeleton organization and biogenesis;0.043258653890098!GO:0001952;regulation of cell-matrix adhesion;0.0437414507783807!GO:0006739;NADP metabolic process;0.0438987153577338!GO:0030274;LIM domain binding;0.0438987153577338!GO:0045185;maintenance of protein localization;0.0442148091736263!GO:0006506;GPI anchor biosynthetic process;0.0447772812949325!GO:0016301;kinase activity;0.0451756922330404!GO:0030508;thiol-disulfide exchange intermediate activity;0.0452868774357318!GO:0006144;purine base metabolic process;0.0454721299074642!GO:0030308;negative regulation of cell growth;0.045736588374974!GO:0051336;regulation of hydrolase activity;0.0468449446915597!GO:0006007;glucose catabolic process;0.0475975708965765!GO:0005862;muscle thin filament tropomyosin;0.0481540641730869!GO:0005938;cell cortex;0.0483476028687023!GO:0006919;caspase activation;0.0492519673335333!GO:0031970;organelle envelope lumen;0.0495334260729467!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0496194621866152!GO:0009889;regulation of biosynthetic process;0.0496194621866152!GO:0005758;mitochondrial intermembrane space;0.0497228482826569
|sample_id=12260
|sample_note=1577
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=lymph node
|time= 00hr00min
|timecourse=Lymphatic_EC_response_to_VEGFC
|top_motifs=SOX{8,9,10}:1.71607647711;NFATC1..3:1.69363783557;PAX1,9:1.37136539506;TLX1..3_NFIC{dimer}:1.12539910689;IKZF1:1.11995552474;RXR{A,B,G}:1.11286604536;STAT2,4,6:1.0737116145;ELF1,2,4:0.827165551943;PAX6:0.814439484527;bHLH_family:0.810000821146;GFI1B:0.76733563299;SOX5:0.754947307317;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.743622323261;ETS1,2:0.690813554394;GZF1:0.672914325048;HBP1_HMGB_SSRP1_UBTF:0.652198003034;TFAP4:0.647692101115;TP53:0.638688352138;NFKB1_REL_RELA:0.611948218137;IKZF2:0.58774161311;SOX2:0.580461771276;CDC5L:0.55381482346;XCPE1{core}:0.545704762908;FOXQ1:0.521002951401;IRF1,2:0.515215146637;LHX3,4:0.498575978282;TBP:0.48871114635;ADNP_IRX_SIX_ZHX:0.466371517485;TEAD1:0.458873297013;LEF1_TCF7_TCF7L1,2:0.426809934939;AR:0.420339614973;SREBF1,2:0.418025997298;SOX17:0.407078849501;HAND1,2:0.399404791976;ZNF423:0.399229924936;ZNF238:0.380531296499;SPIB:0.379543158389;POU3F1..4:0.376279308896;GATA6:0.359205145943;FOXL1:0.348165070636;NANOG{mouse}:0.345781076452;EBF1:0.338784199613;ZBTB6:0.327057749612;ARID5B:0.322458665033;HES1:0.318296721423;HNF4A_NR2F1,2:0.304066426299;T:0.301149769371;MYOD1:0.298159819677;FOX{I1,J2}:0.270708036519;SPZ1:0.262521588816;PAX8:0.257378415931;HMGA1,2:0.254837821338;UFEwm:0.252846706699;SP1:0.241132184715;NKX2-3_NKX2-5:0.219005820833;PRDM1:0.207712752905;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.200842152046;SRF:0.158454003388;YY1:0.138551992294;FOX{F1,F2,J1}:0.133205692655;NR3C1:0.131709207386;EVI1:0.131087052417;HOX{A5,B5}:0.118733999542;TAL1_TCF{3,4,12}:0.116301861116;E2F1..5:0.107867374681;ALX4:0.0977253300048;ZNF148:0.0963092780427;NFE2:0.0666685470026;REST:0.0627717554664;MEF2{A,B,C,D}:0.0592964081381;SMAD1..7,9:0.0541524886422;ZIC1..3:0.0194284825265;PBX1:0.00541631490142;NR5A1,2:-0.00651760331976;ATF2:-0.0141052422258;FOS_FOS{B,L1}_JUN{B,D}:-0.0199530460479;GTF2A1,2:-0.0215969972115;MTE{core}:-0.0319785238456;NFY{A,B,C}:-0.0513558604855;ZFP161:-0.058809452508;IRF7:-0.0598036307355;NANOG:-0.0604716378349;BACH2:-0.0617988091942;TOPORS:-0.0641416392356;MAZ:-0.0688488318198;ALX1:-0.084077962111;FOSL2:-0.085199537066;SPI1:-0.0929799436561;FOXA2:-0.0958637242715;MYB:-0.100854867383;FOX{D1,D2}:-0.116186962185;LMO2:-0.138367721631;GCM1,2:-0.149318887903;NFE2L1:-0.152942632648;HNF1A:-0.156983195464;POU2F1..3:-0.160776083967;GFI1:-0.163408305933;TFAP2{A,C}:-0.164041082006;TFAP2B:-0.164287914562;MED-1{core}:-0.16494646191;BPTF:-0.168662691952;HIC1:-0.174946399445;HSF1,2:-0.176584538207;TEF:-0.184585351977;GATA4:-0.186798442216;DMAP1_NCOR{1,2}_SMARC:-0.20139276119;NFE2L2:-0.202755868144;ZNF143:-0.214401650722;JUN:-0.217791666811;CEBPA,B_DDIT3:-0.232656069109;EN1,2:-0.236083935313;PDX1:-0.246518975203;STAT1,3:-0.250075798715;NR6A1:-0.250845742762;ONECUT1,2:-0.256391163287;NHLH1,2:-0.279615801272;NKX2-2,8:-0.292478880856;STAT5{A,B}:-0.296716861858;RXRA_VDR{dimer}:-0.317362381264;GTF2I:-0.322867806205;HLF:-0.338722387832;FOXO1,3,4:-0.34077711085;MYBL2:-0.342636262857;NRF1:-0.355094745503;CUX2:-0.359086323222;TGIF1:-0.372054487306;NKX3-2:-0.373582731629;PAX5:-0.373665713712;MTF1:-0.375876360188;FOXM1:-0.381480861613;PITX1..3:-0.386490451284;PPARG:-0.393245716;HIF1A:-0.394026705082;ATF4:-0.395155059455;TFDP1:-0.407963829372;FOXD3:-0.411162744729;ATF6:-0.413069155208;ELK1,4_GABP{A,B1}:-0.419199738735;VSX1,2:-0.431360477103;CREB1:-0.433824977054;OCT4_SOX2{dimer}:-0.435748415513;RBPJ:-0.44391996874;ATF5_CREB3:-0.446749451359;POU1F1:-0.449186456643;ESRRA:-0.456536804211;RORA:-0.462700499874;NFIX:-0.463165473701;PAX2:-0.466669106721;POU6F1:-0.470740857177;SNAI1..3:-0.480915289877;XBP1:-0.489584010525;EGR1..3:-0.500807943205;KLF4:-0.532413221421;RFX1:-0.537895944628;GLI1..3:-0.55068438038;PATZ1:-0.574819081914;ZNF384:-0.582540806089;MYFfamily:-0.596542679504;CRX:-0.604751418691;ZEB1:-0.606193032648;TLX2:-0.616231277366;NR1H4:-0.618797127642;RREB1:-0.666083995061;AHR_ARNT_ARNT2:-0.666172145436;ESR1:-0.669801830486;FOXP1:-0.670628690873;RUNX1..3:-0.684496601679;PRRX1,2:-0.693650686992;NKX2-1,4:-0.698454182291;PAX4:-0.700501279774;TFCP2:-0.714045396281;NFIL3:-0.71986838598;CDX1,2,4:-0.733404102966;MAFB:-0.754182536893;AIRE:-0.770901683625;HMX1:-0.776932579131;FOXN1:-0.80185667341;DBP:-0.824214878007;BREu{core}:-0.84828695307;POU5F1:-0.854513817357;PAX3,7:-0.904958571587;RFX2..5_RFXANK_RFXAP:-0.921365729713;MZF1:-0.943352261466;EP300:-0.966652437019;ZBTB16:-0.997964524008;FOXP3:-1.00404265982;NKX3-1:-1.05463806319;NKX6-1,2:-1.05758366911;HOXA9_MEIS1:-1.05776265324;TBX4,5:-1.08372439217;HOX{A6,A7,B6,B7}:-1.15961954883;HOX{A4,D4}:-1.33226092549
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12260-130A1;search_select_hide=table117:FF:12260-130A1
}}
}}

Latest revision as of 18:37, 4 June 2020

Name:Lymphatic Endothelial cells response to VEGFC
Species:Human (Homo sapiens)
Library ID:CNhs11936
Sample type:time courses
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuelymph node
dev stageNA
sexNA
ageNA
cell typeendothelial cell, lymphatic
cell lineNA
companyNA
collaborationMichael Detmar (Swiss Federal Institute of Technology, ETH Zurich)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004711
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11936 CAGE DRX008589 DRR009461
Accession ID Hg19

Library idBAMCTSS
CNhs11936 DRZ000886 DRZ002271
Accession ID Hg38

Library idBAMCTSS
CNhs11936 DRZ012236 DRZ013621
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004711
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10062.CCGTCC sRNA-Seq DRX037271 DRR041637
Accession ID Hg19

Library idBAMCTSS
SRhi10062.CCGTCC DRZ007279


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.11
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0269
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.019
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.605
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.197
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.204
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.125
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.107
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.192
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0235
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0965
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0586
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.362
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.922
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.156
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11936

Jaspar motifP-value
MA0002.20.252
MA0003.10.326
MA0004.10.173
MA0006.10.0282
MA0007.10.111
MA0009.10.829
MA0014.10.617
MA0017.10.0838
MA0018.20.0326
MA0019.10.0547
MA0024.10.694
MA0025.10.827
MA0027.10.433
MA0028.10.922
MA0029.10.937
MA0030.10.804
MA0031.10.913
MA0035.20.0993
MA0038.10.807
MA0039.20.383
MA0040.10.0708
MA0041.10.382
MA0042.10.597
MA0043.10.0214
MA0046.10.55
MA0047.20.179
MA0048.10.284
MA0050.11.15482e-5
MA0051.15.01516e-7
MA0052.10.216
MA0055.10.0829
MA0057.10.993
MA0058.10.0387
MA0059.10.118
MA0060.10.741
MA0061.15.41752e-5
MA0062.20.762
MA0065.20.0571
MA0066.10.0677
MA0067.10.2
MA0068.10.872
MA0069.10.0818
MA0070.10.392
MA0071.10.917
MA0072.10.655
MA0073.10.582
MA0074.10.582
MA0076.10.0735
MA0077.16.07139e-8
MA0078.10.0266
MA0079.20.95
MA0080.20.00232
MA0081.10.387
MA0083.10.577
MA0084.10.019
MA0087.10.00778
MA0088.10.314
MA0090.10.0482
MA0091.10.49
MA0092.10.133
MA0093.10.15
MA0099.20.0123
MA0100.10.103
MA0101.13.8681e-14
MA0102.20.233
MA0103.10.94
MA0104.20.925
MA0105.10.0127
MA0106.10.00649
MA0107.15.77236e-14
MA0108.20.00895
MA0111.10.736
MA0112.20.0532
MA0113.10.231
MA0114.10.236
MA0115.10.716
MA0116.10.216
MA0117.10.403
MA0119.10.0387
MA0122.10.196
MA0124.10.324
MA0125.10.71
MA0131.10.905
MA0135.10.235
MA0136.10.00839
MA0137.20.0325
MA0138.20.371
MA0139.10.262
MA0140.10.128
MA0141.10.346
MA0142.10.747
MA0143.10.563
MA0144.10.00131
MA0145.10.218
MA0146.10.42
MA0147.10.917
MA0148.10.0557
MA0149.10.0875
MA0150.10.47
MA0152.10.57
MA0153.10.388
MA0154.10.0579
MA0155.10.122
MA0156.12.70911e-4
MA0157.10.278
MA0159.10.11
MA0160.10.722
MA0162.10.07
MA0163.10.22
MA0164.10.476
MA0258.10.156
MA0259.10.335



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11936

Novel motifP-value
10.145
100.999
1000.104
1010.251
1020.942
1030.221
1040.744
1050.767
1060.0229
1070.0506
1080.156
1090.0247
110.0386
1100.0288
1110.594
1120.531
1130.291
1140.442
1150.839
1160.387
1170.221
1180.851
1190.0276
120.997
1200.0487
1210.515
1220.768
1230.202
1240.0285
1250.488
1260.757
1270.399
1280.89
1290.331
130.0164
1300.447
1310.273
1320.221
1330.854
1340.653
1350.0808
1360.352
1370.371
1380.977
1390.916
140.895
1400.255
1410.133
1420.473
1430.0427
1440.995
1450.0898
1460.254
1470.0658
1480.462
1490.0275
150.818
1500.239
1510.517
1520.0157
1530.202
1540.0619
1550.247
1560.2
1570.0459
1580.111
1590.187
160.344
1600.0448
1610.894
1620.992
1630.737
1640.388
1650.572
1660.707
1670.447
1680.0671
1690.0342
170.0958
180.855
190.0702
20.564
200.875
210.735
220.267
230.265
240.531
250.334
260.543
270.205
280.22
290.303
30.726
300.678
310.546
320.352
330.0381
340.471
350.719
360.00668
370.0749
380.107
390.475
40.731
403.92975e-4
410.128
420.807
430.631
440.276
450.345
460.359
470.277
480.0852
490.874
50.406
500.333
510.536
520.979
530.823
540.66
550.761
560.484
570.614
580.382
590.122
60.176
600.741
610.691
620.69
630.22
640.734
650.0855
660.58
670.358
680.54
690.969
70.878
700.778
710.268
720.402
730.00226
740.434
750.192
760.614
770.274
780.0618
790.236
80.0235
800.933
810.59
820.335
830.534
840.518
850.451
860.789
870.0188
880.845
890.213
90.669
900.825
910.676
920.144
930.866
940.569
950.00835
960.705
970.44
980.789
990.0233



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11936


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0002138 (endothelial cell of lymphatic vessel)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000055 (vessel)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002049 (vasculature)
0007798 (vascular system)
0001473 (lymphatic vessel)
0002465 (lymphoid system)
0004535 (cardiovascular system)
0004536 (lymph vasculature)
0006558 (lymphatic part of lymphoid system)
0002193 (hemolymphoid system)
0002405 (immune system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000350 (experimentally modified sample)
0000049 (human lymphatic endothelial cell sample)
0000341 (Vegfc treatment sample)
0000344 (0 minute sample)
0000410 (human Lymphatic Endothelial cells 0min after VEGFC treatment sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
CL:0005022 (vascular lymphangioblast)

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