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(Created page with "{{f5samples |id=FF:10042-101F6 |name=corpus callosum, adult, pool1 |sample_id=10042 |rna_tube_id=101F6 |rna_box=101 |rna_position=F6 |sample_cell_lot=NA |sample_cell_c...")
 
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{{f5samples
{{f5samples
|id=FF:10042-101F6
|DRA_sample_Accession=CAGE@SAMD00004735
|name=corpus callosum, adult, pool1
|accession_numbers=CAGE;DRX008640;DRR009512;DRZ000937;DRZ002322;DRZ012287;DRZ013672
|sample_id=10042
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0002336,UBERON:0000479,UBERON:0004121,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0005162,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000122,UBERON:0011215,UBERON:0001018,UBERON:0002616,UBERON:0002780,UBERON:0002473,UBERON:0005340,UBERON:0003544,UBERON:0005970,UBERON:0002316,UBERON:0010317,UBERON:0001020,UBERON:0001017,UBERON:0001016,UBERON:0001893,UBERON:0001890,UBERON:0002437
|rna_tube_id=101F6
|rna_box=101
|rna_position=F6
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Clontech
|rna_lot_number=6080307.00000
|rna_catalog_number=Cat:636567
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=24-68 years old adult
|sample_tissue=corpus callosum
|sample_donor(cell lot)=24 pool
|sample_sex=mixed
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=50.00000
|rna_concentration=
|sample_note=
|profile_hcage=CNhs10649,LSID658,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000073,UBERON:0000122,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001018,UBERON:0001020,UBERON:0001049,UBERON:0001062,UBERON:0001890,UBERON:0001893,UBERON:0002050,UBERON:0002316,UBERON:0002336,UBERON:0002346,UBERON:0002437,UBERON:0002473,UBERON:0002532,UBERON:0002616,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0003544,UBERON:0004121,UBERON:0005068,UBERON:0005162,UBERON:0005291,UBERON:0005340,UBERON:0005423,UBERON:0005743,UBERON:0005970,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010042
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.94!863.61!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.74!553.50!OLIG1;;chr22:38380543..38380569,-!p1@SOX10!2.71!515.62!SOX10;;chr11:61520075..61520136,+!p1@C11orf9!2.57!763.52!C11orf9;;chr21:34398234..34398250,+!p1@OLIG2!2.29!195.26!OLIG2;;chr2:145277882..145277967,-!p3@ZEB2!2.19!256.87!ZEB2;;chr8:53322304..53322340,-!p1@ST18!2.11!127.19!ST18;;chr16:1031762..1031781,+!p1@SOX8!2.03!107.10!SOX8;;chr3:181429704..181429722,+!p1@SOX2!1.98!93.62!SOX2;;chr10:134599649..134599653,-!p1@NKX6-2!1.97!91.26!NKX6-2;;chr12:26277817..26277863,-!p2@BHLHE41!1.94!113.50!BHLHE41;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.91!79.74!POU3F3;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.88!74.95!PEG3;;chr21:34442540..34442560,+!p2@OLIG1!1.83!67.33!OLIG1;;chr10:48355030..48355090,+!p1@ZNF488!1.78!75.69!ZNF488;;chr12:106976774..106976788,+!p1@RFX4!1.78!59.11!RFX4;;chr19:30863271..30863338,+!p1@ZNF536!1.73!53.11!ZNF536;;chr8:53322347..53322378,-!p2@ST18!1.72!51.63!ST18;;chr1:214161272..214161322,+!p1@PROX1!1.66!61.81!PROX1;;chr19:13135386..13135435,+!p4@NFIX!1.57!36.13!NFIX;;chr12:106976678..106976708,+!p2@RFX4!1.56!35.39!RFX4;;chr3:181429741..181429767,+!p2@SOX2!1.56!35.25!SOX2;;chr12:26277956..26277980,-!p1@BHLHE41!1.51!109.66!BHLHE41;;chr4:81118647..81118666,+!p1@PRDM8!1.51!40.91!PRDM8;;chr16:85932760..85932775,+!p1@IRF8!1.51!31.34!IRF8;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.50!30.40!POU3F3;;chr9:114287433..114287513,+!p1@ZNF483!1.49!75.15!ZNF483;;chr16:51185172..51185197,-!p1@SALL1!1.48!29.52!SALL1;;chr6:19837592..19837621,+!p1@ID4!1.47!167.29!ID4;;chrY:21906594..21906622,-!p1@KDM5D!1.47!28.78!KDM5D;;chr2:145275982..145276003,-!p7@ZEB2!1.47!28.58!ZEB2;;chr15:80696703..80696754,+!p1@ARNT2!1.46!36.80!ARNT2;;chr10:64134120..64134183,+!p1@ZNF365!1.45!32.35!ZNF365;;chr17:74137321..74137337,-!p1@FOXJ1!1.43!25.68!FOXJ1;;chr3:52001396..52001425,-!p4@PCBP4!1.39!41.18!PCBP4;;chr22:41763452..41763466,+!p2@TEF!1.39!23.39!TEF;;chr11:47400078..47400106,-!p1@SPI1!1.39!23.32!SPI1;;chr16:51185318..51185348,-!p2@SALL1!1.38!23.25!SALL1;;chr2:177053386..177053402,+!p1@HOXD1!1.37!22.58!HOXD1;;chr19:13135582..13135600,+!p3@NFIX!1.36!21.70!NFIX;;chr17:53342311..53342400,+!p1@HLF!1.34!23.93!HLF;;chr14:29234581..29234601,+!p2@FOXG1!1.33!20.56!FOXG1;;chr12:54779511..54779577,-!p5@ZNF385A!1.33!20.22!ZNF385A;;chr7:28725740..28725778,+!p1@CREB5!1.32!173.89!CREB5;;chr7:63505799..63505904,+!p1@ZNF727!1.32!19.68!ZNF727;;chr20:21494654..21494678,-!p2@NKX2-2!1.31!19.61!NKX2-2;;chr14:29235961..29236008,+!p1@FOXG1!1.31!19.41!FOXG1;;chr14:33403881..33403924,+!p1@NPAS3!1.30!18.80!NPAS3;;chr17:70117153..70117174,+!p1@SOX9!1.28!181.65!SOX9;;chr3:126076242..126076257,-!p1@KLF15!1.28!22.44!KLF15;;chr14:33408072..33408114,+!p2@NPAS3!1.28!21.50!NPAS3;;chr9:77112244..77112262,+!p1@RORB!1.28!20.15!RORB;;chr19:46801639..46801699,+!p1@HIF3A!1.28!18.27!HIF3A;;chr10:119302232..119302265,+!p1@EMX2!1.27!17.66!EMX2;;chr2:95963120..95963136,+!p2@KCNIP3!1.27!17.66!KCNIP3;;chr2:95963052..95963106,+!p1@KCNIP3!1.26!17.32!KCNIP3;;chr11:113930425..113930471,+!p1@ZBTB16!1.25!24.26!ZBTB16;;chr12:26277929..26277955,-!p3@BHLHE41!1.25!23.86!BHLHE41;;chr2:68592406..68592424,+!p1@PLEK!1.25!16.78!PLEK;;chr4:26344754..26344772,+!p10@RBPJ!1.23!15.91!RBPJ;;chr2:145277640..145277771,-!p1@ZEB2!1.22!206.25!ZEB2;;chr9:102584159..102584174,+!p2@NR4A3!1.22!28.04!NR4A3;;chr19:13134772..13134822,+!p2@NFIX!1.22!22.98!NFIX;;chr3:147111198..147111225,+!p4@ZIC1!1.22!15.70!ZIC1;;chr6:126070769..126070801,+!p1@HEY2!1.20!17.25!HEY2;;chr17:17726907..17726958,-!p2@SREBF1!1.19!88.36!SREBF1;;chr1:61548069..61548102,+!p3@NFIA!1.19!35.32!NFIA;;chr10:111987079..111987115,+!p3@MXI1!1.19!19.82!MXI1;;chr21:34442584..34442587,+!p3@OLIG1!1.19!14.56!OLIG1;;chr4:57547454..57547469,-!p1@HOPX!1.19!14.49!HOPX;;chr4:26344778..26344807,+!p8@RBPJ!1.18!14.15!RBPJ;;chr11:31832862..31832884,-!p2@PAX6!1.17!13.95!PAX6;;chr19:13134457..13134462,+!p5@NFIX!1.16!23.93!NFIX;;chr3:52001426..52001447,-!p3@PCBP4!1.15!37.14!PCBP4;;chr11:31832658..31832681,-!p1@PAX6!1.14!12.87!PAX6;;chr2:145275947..145275981,-!p10@ZEB2!1.14!12.74!ZEB2;;chr3:147111231..147111281,+!p3@ZIC1!1.14!12.74!ZIC1;;chr13:100634031..100634045,+!p1@ZIC2!1.13!12.60!ZIC2;;chr9:1050331..1050363,+!p1@DMRT2!1.12!12.33!DMRT2;;chr12:52437488..52437507,+!p2@NR4A1!1.12!12.20!NR4A1;;chr7:28448965..28448994,+!p2@CREB5!1.11!42.33!CREB5;;chr2:74229812..74229867,+!p1@TET3!1.11!29.79!TET3;;chr3:114819124..114819200,-!p3@ZBTB20!1.11!27.63!ZBTB20;;chr17:7492684..7492778,-!p2@SOX15!1.10!24.67!SOX15;;chr12:125003087..125003141,-!p4@NCOR2!1.10!14.96!NCOR2;;chr12:106976656..106976672,+!p4@RFX4!1.10!11.59!RFX4;;chr12:103351444..103351461,+!p1@ASCL1!1.09!11.19!ASCL1;;chr20:62680984..62680999,-!p1@SOX18!1.08!14.83!SOX18;;chr12:103352277..103352324,+!p2@ASCL1!1.07!10.78!ASCL1;;chr19:13135731..13135787,+!p10@NFIX!1.07!10.65!NFIX;;chr5:124084493..124084524,-!p2@ZNF608!1.06!23.79!ZNF608;;chr18:5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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000122;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/corpus%2520callosum%252c%2520adult%252c%2520pool1.CNhs10649.10042-101F6.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/corpus%2520callosum%252c%2520adult%252c%2520pool1.CNhs10649.10042-101F6.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/corpus%2520callosum%252c%2520adult%252c%2520pool1.CNhs10649.10042-101F6.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/corpus%2520callosum%252c%2520adult%252c%2520pool1.CNhs10649.10042-101F6.hg38.nobarcode.ctss.bed.gz
|id=FF:10042-101F6
|is_a=EFO:0002091;;FF:0010042
|is_obsolete=
|library_id=CNhs10649
|library_id_phase_based=2:CNhs10649
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10042
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10042
|name=corpus callosum, adult, pool1
|namespace=FANTOM5
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|profile_hcage=CNhs10649,LSID658,release008,COMPLETED
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|rna_box=101
|rna_catalog_number=Cat:636567
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=6080307
|rna_od260/230=
|rna_od260/280=
|rna_position=F6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101F6
|rna_weight_ug=50
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Clontech
|sample_description=
|sample_dev_stage=24-68 years old adult
|sample_disease=normal
|sample_donor(cell lot)=24 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.35912538547731e-272!GO:0005737;cytoplasm;2.01533014275189e-151!GO:0043226;organelle;8.50845710046615e-105!GO:0043229;intracellular organelle;1.76959455086347e-104!GO:0043227;membrane-bound organelle;2.83958464752573e-100!GO:0043231;intracellular membrane-bound organelle;3.41562815392676e-100!GO:0044444;cytoplasmic part;1.32437603307025e-97!GO:0005515;protein binding;2.38239108442612e-65!GO:0044422;organelle part;3.05342034516577e-65!GO:0044446;intracellular organelle part;3.08523762663188e-64!GO:0032991;macromolecular complex;5.34544207671818e-50!GO:0016043;cellular component organization and biogenesis;1.52399478389142e-42!GO:0031090;organelle membrane;1.80606424802181e-38!GO:0033036;macromolecule localization;2.27456822449619e-38!GO:0015031;protein transport;1.43165725327941e-37!GO:0003723;RNA binding;6.38222857450689e-37!GO:0005739;mitochondrion;1.06746855318031e-36!GO:0044238;primary metabolic process;3.36073582617365e-35!GO:0008104;protein localization;3.86005416595437e-35!GO:0045184;establishment of protein localization;2.4110709462355e-34!GO:0030529;ribonucleoprotein complex;4.04238081761158e-34!GO:0044237;cellular metabolic process;6.00526390054532e-34!GO:0043233;organelle lumen;1.83057611272817e-33!GO:0031974;membrane-enclosed lumen;1.83057611272817e-33!GO:0044428;nuclear part;1.70841999509577e-31!GO:0046907;intracellular transport;3.65688667024633e-31!GO:0043170;macromolecule metabolic process;2.83889233565057e-28!GO:0043234;protein complex;1.08634155128975e-27!GO:0031975;envelope;3.22681201853332e-26!GO:0044429;mitochondrial part;3.3183989625036e-26!GO:0031967;organelle envelope;5.68469748715863e-26!GO:0016071;mRNA metabolic process;7.83347652351687e-26!GO:0005634;nucleus;1.4587451633971e-25!GO:0019538;protein metabolic process;1.96175956140145e-25!GO:0051649;establishment of cellular localization;5.03617526743824e-24!GO:0051641;cellular localization;5.81747409224075e-24!GO:0006396;RNA processing;5.56717633535255e-23!GO:0006886;intracellular protein transport;1.22258970297165e-22!GO:0008380;RNA splicing;1.22258970297165e-22!GO:0016192;vesicle-mediated transport;1.79121063911622e-22!GO:0044260;cellular macromolecule metabolic process;3.97469055323861e-22!GO:0044267;cellular protein metabolic process;2.27364738364943e-21!GO:0005829;cytosol;7.10865423162553e-21!GO:0006397;mRNA processing;9.33985482150066e-21!GO:0006996;organelle organization and biogenesis;1.44410330238566e-19!GO:0009058;biosynthetic process;1.66511931285174e-19!GO:0031981;nuclear lumen;2.52145154180315e-19!GO:0005740;mitochondrial envelope;9.15942381806676e-19!GO:0031966;mitochondrial membrane;4.05261935139045e-18!GO:0005794;Golgi apparatus;9.60688481502815e-18!GO:0065003;macromolecular complex assembly;1.85163349423225e-17!GO:0019866;organelle inner membrane;3.22770684630525e-17!GO:0005840;ribosome;1.44305214732358e-16!GO:0043283;biopolymer metabolic process;2.3013363681407e-16!GO:0005743;mitochondrial inner membrane;2.67389532347596e-16!GO:0006119;oxidative phosphorylation;6.77044719820976e-16!GO:0012505;endomembrane system;8.94217947292485e-16!GO:0022607;cellular component assembly;1.26999996944727e-15!GO:0006412;translation;2.12010847741826e-15!GO:0005681;spliceosome;2.3485316647505e-15!GO:0048770;pigment granule;4.82236107170953e-15!GO:0042470;melanosome;4.82236107170953e-15!GO:0005783;endoplasmic reticulum;1.11961943413678e-14!GO:0016874;ligase activity;1.79969938155511e-14!GO:0000166;nucleotide binding;1.82436382448262e-14!GO:0009059;macromolecule biosynthetic process;3.28488631836877e-14!GO:0031982;vesicle;6.80303606065681e-14!GO:0044249;cellular biosynthetic process;7.01521494110828e-14!GO:0006512;ubiquitin cycle;1.08001537397077e-13!GO:0031410;cytoplasmic vesicle;2.57060833650297e-13!GO:0031988;membrane-bound vesicle;2.73677929898275e-13!GO:0005654;nucleoplasm;4.20826852333083e-13!GO:0016023;cytoplasmic membrane-bound vesicle;9.52704701383775e-13!GO:0003735;structural constituent of ribosome;9.85979335829451e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.03465791380397e-12!GO:0010467;gene expression;1.08757654718594e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;1.10651875181242e-12!GO:0016462;pyrophosphatase activity;1.2888087310422e-12!GO:0043412;biopolymer modification;2.01223708500359e-12!GO:0008134;transcription factor binding;3.93754216290633e-12!GO:0006464;protein modification process;5.50766401678683e-12!GO:0017111;nucleoside-triphosphatase activity;5.74493706783209e-12!GO:0044451;nucleoplasm part;1.59361315628946e-11!GO:0044265;cellular macromolecule catabolic process;3.28406986676779e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;4.14015094646648e-11!GO:0006511;ubiquitin-dependent protein catabolic process;5.01929016300232e-11!GO:0044455;mitochondrial membrane part;5.29204090256576e-11!GO:0044257;cellular protein catabolic process;6.0186014937398e-11!GO:0019941;modification-dependent protein catabolic process;6.57111293600918e-11!GO:0043632;modification-dependent macromolecule catabolic process;6.57111293600918e-11!GO:0048193;Golgi vesicle transport;7.78982595673846e-11!GO:0005768;endosome;7.85941438024183e-11!GO:0043687;post-translational protein modification;8.08779093192161e-11!GO:0008092;cytoskeletal protein binding;9.07187696380816e-11!GO:0030695;GTPase regulator activity;9.72364263735872e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.80114973606912e-11!GO:0033279;ribosomal subunit;1.13315209233572e-10!GO:0006457;protein folding;1.53655323585878e-10!GO:0005746;mitochondrial respiratory chain;1.5490389518151e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.74177990977044e-10!GO:0006605;protein targeting;1.93370988779651e-10!GO:0050136;NADH dehydrogenase (quinone) activity;2.38694276400326e-10!GO:0003954;NADH dehydrogenase activity;2.38694276400326e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.38694276400326e-10!GO:0031980;mitochondrial lumen;4.81570284139336e-10!GO:0005759;mitochondrial matrix;4.81570284139336e-10!GO:0032553;ribonucleotide binding;5.22746930149454e-10!GO:0032555;purine ribonucleotide binding;5.22746930149454e-10!GO:0044248;cellular catabolic process;6.01220936062968e-10!GO:0017076;purine nucleotide binding;1.05165356784515e-09!GO:0016044;membrane organization and biogenesis;1.39051123636034e-09!GO:0008565;protein transporter activity;1.51287225764078e-09!GO:0022618;protein-RNA complex assembly;1.56058268998303e-09!GO:0044432;endoplasmic reticulum part;1.78942257080509e-09!GO:0043285;biopolymer catabolic process;2.10819404008671e-09!GO:0006461;protein complex assembly;3.79668249174451e-09!GO:0051082;unfolded protein binding;4.46222188887796e-09!GO:0044445;cytosolic part;4.87020789828654e-09!GO:0030964;NADH dehydrogenase complex (quinone);6.43798872267978e-09!GO:0045271;respiratory chain complex I;6.43798872267978e-09!GO:0005747;mitochondrial respiratory chain complex I;6.43798872267978e-09!GO:0042775;organelle ATP synthesis coupled electron transport;7.88826192977335e-09!GO:0042773;ATP synthesis coupled electron transport;7.88826192977335e-09!GO:0007010;cytoskeleton organization and biogenesis;8.67289659413624e-09!GO:0043228;non-membrane-bound organelle;1.01269485839357e-08!GO:0043232;intracellular non-membrane-bound organelle;1.01269485839357e-08!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.11760592285509e-08!GO:0007264;small GTPase mediated signal transduction;1.11760592285509e-08!GO:0030163;protein catabolic process;1.17179016180629e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.29983070911954e-08!GO:0008135;translation factor activity, nucleic acid binding;1.42342991693717e-08!GO:0005083;small GTPase regulator activity;1.69246287717247e-08!GO:0031252;leading edge;2.34976064775951e-08!GO:0009057;macromolecule catabolic process;2.51952666381977e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.00644664780204e-08!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.19627337933988e-08!GO:0051186;cofactor metabolic process;4.0734428354033e-08!GO:0016604;nuclear body;5.51931696515248e-08!GO:0016607;nuclear speck;5.7506242500981e-08!GO:0005635;nuclear envelope;5.84827646933757e-08!GO:0030036;actin cytoskeleton organization and biogenesis;6.06545682263186e-08!GO:0000502;proteasome complex (sensu Eukaryota);6.06545682263186e-08!GO:0019899;enzyme binding;8.5600174946054e-08!GO:0005773;vacuole;8.89022677880934e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.95370227001718e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.7791958391057e-08!GO:0019829;cation-transporting ATPase activity;1.05568791124724e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.18816456958939e-07!GO:0000375;RNA splicing, via transesterification reactions;1.18816456958939e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.18816456958939e-07!GO:0006913;nucleocytoplasmic transport;1.24896486053247e-07!GO:0005789;endoplasmic reticulum membrane;1.27779206177844e-07!GO:0031965;nuclear membrane;1.50246470554529e-07!GO:0006793;phosphorus metabolic process;1.51140309893415e-07!GO:0006796;phosphate metabolic process;1.51140309893415e-07!GO:0044431;Golgi apparatus part;1.85188334203523e-07!GO:0008639;small protein conjugating enzyme activity;1.96939495411523e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.98419599150107e-07!GO:0019787;small conjugating protein ligase activity;1.99983829645438e-07!GO:0051169;nuclear transport;2.24002216857494e-07!GO:0016881;acid-amino acid ligase activity;2.59952839633608e-07!GO:0004842;ubiquitin-protein ligase activity;2.84872162866909e-07!GO:0048523;negative regulation of cellular process;3.82530030874487e-07!GO:0030029;actin filament-based process;4.67609463762507e-07!GO:0003924;GTPase activity;4.71063377242897e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.77206566802879e-07!GO:0006446;regulation of translational initiation;4.97432528421019e-07!GO:0000323;lytic vacuole;6.04643646632922e-07!GO:0005764;lysosome;6.04643646632922e-07!GO:0006897;endocytosis;6.53090769542886e-07!GO:0010324;membrane invagination;6.53090769542886e-07!GO:0015935;small ribosomal subunit;7.85661248112474e-07!GO:0003712;transcription cofactor activity;8.04259718300249e-07!GO:0044440;endosomal part;8.34224595992785e-07!GO:0010008;endosome membrane;8.34224595992785e-07!GO:0005770;late endosome;8.85293686169924e-07!GO:0015631;tubulin binding;1.0984666956063e-06!GO:0005769;early endosome;1.39234341853779e-06!GO:0003743;translation initiation factor activity;1.65184322956398e-06!GO:0015986;ATP synthesis coupled proton transport;1.80917413859319e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.80917413859319e-06!GO:0005525;GTP binding;2.0301953990051e-06!GO:0005905;coated pit;2.09431281490605e-06!GO:0015630;microtubule cytoskeleton;2.10881910133116e-06!GO:0045045;secretory pathway;2.12181320497422e-06!GO:0009056;catabolic process;2.65363054797008e-06!GO:0032559;adenyl ribonucleotide binding;2.77718451146317e-06!GO:0006413;translational initiation;2.79246039565242e-06!GO:0048475;coated membrane;3.53728650214437e-06!GO:0030117;membrane coat;3.53728650214437e-06!GO:0005730;nucleolus;3.66035367549571e-06!GO:0008047;enzyme activator activity;4.87808870387677e-06!GO:0003779;actin binding;4.8806365075709e-06!GO:0009060;aerobic respiration;4.88725963378591e-06!GO:0005524;ATP binding;5.05677389642068e-06!GO:0030554;adenyl nucleotide binding;5.70153739664105e-06!GO:0045333;cellular respiration;7.14954161670013e-06!GO:0016070;RNA metabolic process;8.04508813005676e-06!GO:0005096;GTPase activator activity;9.44094025712984e-06!GO:0017038;protein import;9.69295113473242e-06!GO:0006810;transport;1.03575807248697e-05!GO:0046034;ATP metabolic process;1.03614117962484e-05!GO:0006732;coenzyme metabolic process;1.04591738672474e-05!GO:0048519;negative regulation of biological process;1.118978741072e-05!GO:0048471;perinuclear region of cytoplasm;1.14169663991547e-05!GO:0006163;purine nucleotide metabolic process;1.21716391228516e-05!GO:0009150;purine ribonucleotide metabolic process;1.25349718280745e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.35073216911769e-05!GO:0016887;ATPase activity;1.363311379624e-05!GO:0008610;lipid biosynthetic process;1.43170367599345e-05!GO:0042623;ATPase activity, coupled;1.63732806183986e-05!GO:0000139;Golgi membrane;1.79569437274332e-05!GO:0006099;tricarboxylic acid cycle;1.90156502606193e-05!GO:0046356;acetyl-CoA catabolic process;1.90156502606193e-05!GO:0051246;regulation of protein metabolic process;1.95036603177983e-05!GO:0009259;ribonucleotide metabolic process;2.08332212964553e-05!GO:0016568;chromatin modification;2.09858357693957e-05!GO:0008654;phospholipid biosynthetic process;2.14094758510066e-05!GO:0044453;nuclear membrane part;2.1569212768848e-05!GO:0016564;transcription repressor activity;2.43148410467148e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.84641314087764e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.84641314087764e-05!GO:0006366;transcription from RNA polymerase II promoter;3.00867208303113e-05!GO:0032561;guanyl ribonucleotide binding;3.1163107072314e-05!GO:0019001;guanyl nucleotide binding;3.1163107072314e-05!GO:0006164;purine nucleotide biosynthetic process;3.57568725031112e-05!GO:0005874;microtubule;3.57738409132858e-05!GO:0009152;purine ribonucleotide biosynthetic process;3.61340300115147e-05!GO:0016310;phosphorylation;4.42873189410346e-05!GO:0007265;Ras protein signal transduction;4.68999780303607e-05!GO:0045786;negative regulation of progression through cell cycle;4.99547828311823e-05!GO:0006915;apoptosis;5.17715206605964e-05!GO:0012501;programmed cell death;5.23668935203503e-05!GO:0008287;protein serine/threonine phosphatase complex;5.39437483037209e-05!GO:0006403;RNA localization;5.79505735518729e-05!GO:0006754;ATP biosynthetic process;5.90579187610765e-05!GO:0006753;nucleoside phosphate metabolic process;5.90579187610765e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.30666580849772e-05!GO:0009144;purine nucleoside triphosphate metabolic process;6.30666580849772e-05!GO:0008017;microtubule binding;6.51384595307538e-05!GO:0050657;nucleic acid transport;6.51384595307538e-05!GO:0051236;establishment of RNA localization;6.51384595307538e-05!GO:0050658;RNA transport;6.51384595307538e-05!GO:0009109;coenzyme catabolic process;6.59064553059064e-05!GO:0051179;localization;6.5916028746474e-05!GO:0008219;cell death;6.70100558667181e-05!GO:0016265;death;6.70100558667181e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;7.08678421135938e-05!GO:0006888;ER to Golgi vesicle-mediated transport;7.10154093614149e-05!GO:0009199;ribonucleoside triphosphate metabolic process;7.54976244959007e-05!GO:0006084;acetyl-CoA metabolic process;7.96038868304043e-05!GO:0030027;lamellipodium;8.75267318178922e-05!GO:0030120;vesicle coat;8.97907085960328e-05!GO:0030662;coated vesicle membrane;8.97907085960328e-05!GO:0009055;electron carrier activity;9.26818526419859e-05!GO:0045259;proton-transporting ATP synthase complex;9.37449856085579e-05!GO:0009260;ribonucleotide biosynthetic process;9.63026814890081e-05!GO:0005643;nuclear pore;0.000108885240007423!GO:0009141;nucleoside triphosphate metabolic process;0.00011436791043335!GO:0050794;regulation of cellular process;0.000118799460575403!GO:0016791;phosphoric monoester hydrolase activity;0.000119052624700709!GO:0006613;cotranslational protein targeting to membrane;0.000119213235733135!GO:0015934;large ribosomal subunit;0.000122808158701757!GO:0007242;intracellular signaling cascade;0.000125160471990414!GO:0046467;membrane lipid biosynthetic process;0.000125279256742376!GO:0051187;cofactor catabolic process;0.000133927360304882!GO:0050789;regulation of biological process;0.000142152405295232!GO:0005798;Golgi-associated vesicle;0.000148557105252612!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000148557105252612!GO:0005793;ER-Golgi intermediate compartment;0.000162223430222834!GO:0005761;mitochondrial ribosome;0.000189692887013637!GO:0000313;organellar ribosome;0.000189692887013637!GO:0032940;secretion by cell;0.000191799906905294!GO:0051056;regulation of small GTPase mediated signal transduction;0.000213676312249297!GO:0015078;hydrogen ion transmembrane transporter activity;0.000224162720017385!GO:0006323;DNA packaging;0.000240027596129183!GO:0006259;DNA metabolic process;0.000241091457976227!GO:0009966;regulation of signal transduction;0.000248428593310652!GO:0001726;ruffle;0.000266329647042481!GO:0031901;early endosome membrane;0.000288129217829491!GO:0003714;transcription corepressor activity;0.000302401797153519!GO:0051170;nuclear import;0.000304447324419817!GO:0006643;membrane lipid metabolic process;0.000305498035348868!GO:0051128;regulation of cellular component organization and biogenesis;0.000308645802613358!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000314800647490583!GO:0051234;establishment of localization;0.000335359332804037!GO:0016126;sterol biosynthetic process;0.000341642445506285!GO:0006606;protein import into nucleus;0.000345270524940354!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000349669082591579!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000366210037761846!GO:0015399;primary active transmembrane transporter activity;0.000366210037761846!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000370819928748376!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000370819928748376!GO:0000151;ubiquitin ligase complex;0.00037484280359442!GO:0016197;endosome transport;0.000375496320859772!GO:0043623;cellular protein complex assembly;0.000392004059702442!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.000418515198933966!GO:0000902;cell morphogenesis;0.000418972475244314!GO:0032989;cellular structure morphogenesis;0.000418972475244314!GO:0009142;nucleoside triphosphate biosynthetic process;0.000457999773161289!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000457999773161289!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00048156478388919!GO:0006650;glycerophospholipid metabolic process;0.000519088061251755!GO:0004721;phosphoprotein phosphatase activity;0.000564373941354049!GO:0009892;negative regulation of metabolic process;0.000574929190281795!GO:0031902;late endosome membrane;0.000583676134628922!GO:0005085;guanyl-nucleotide exchange factor activity;0.000624162215193977!GO:0030135;coated vesicle;0.000628871493463436!GO:0005875;microtubule associated complex;0.000652211421971526!GO:0016311;dephosphorylation;0.000652211421971526!GO:0006916;anti-apoptosis;0.000669672032530714!GO:0001666;response to hypoxia;0.000706405278152544!GO:0032446;protein modification by small protein conjugation;0.000708220024368357!GO:0030133;transport vesicle;0.000763686713713273!GO:0044255;cellular lipid metabolic process;0.000822817473010167!GO:0043069;negative regulation of programmed cell death;0.000822817473010167!GO:0051028;mRNA transport;0.000822817473010167!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000838379027105983!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000879195360342146!GO:0000245;spliceosome assembly;0.000893860887597907!GO:0043492;ATPase activity, coupled to movement of substances;0.000900012805002443!GO:0019902;phosphatase binding;0.000930846673026078!GO:0043066;negative regulation of apoptosis;0.000930846673026078!GO:0043566;structure-specific DNA binding;0.00093291631526362!GO:0007272;ensheathment of neurons;0.000945365674909934!GO:0008366;axon ensheathment;0.000945365674909934!GO:0030867;rough endoplasmic reticulum membrane;0.000981684682740375!GO:0003713;transcription coactivator activity;0.00100379096051843!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00106630160679472!GO:0051188;cofactor biosynthetic process;0.00107179643114283!GO:0030118;clathrin coat;0.00110330344208533!GO:0016481;negative regulation of transcription;0.00112943265500078!GO:0016567;protein ubiquitination;0.0011568212861621!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00118273012540687!GO:0005774;vacuolar membrane;0.0012187966377491!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00122531091688777!GO:0007019;microtubule depolymerization;0.00129046592914025!GO:0031072;heat shock protein binding;0.00130575963873757!GO:0003676;nucleic acid binding;0.00132864488991353!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00140361148330258!GO:0007399;nervous system development;0.00142899968444235!GO:0008026;ATP-dependent helicase activity;0.00144254375845469!GO:0031324;negative regulation of cellular metabolic process;0.00145000707632059!GO:0006752;group transfer coenzyme metabolic process;0.00149945079825968!GO:0006612;protein targeting to membrane;0.00157192452474089!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00167356371397238!GO:0004812;aminoacyl-tRNA ligase activity;0.00167356371397238!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00167356371397238!GO:0045892;negative regulation of transcription, DNA-dependent;0.00177069116209671!GO:0006402;mRNA catabolic process;0.00179065160749351!GO:0000159;protein phosphatase type 2A complex;0.00185056137650138!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00185056137650138!GO:0003729;mRNA binding;0.00193172204044051!GO:0065002;intracellular protein transport across a membrane;0.00193172204044051!GO:0051168;nuclear export;0.00194222297013577!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00194222297013577!GO:0019867;outer membrane;0.0019543826634301!GO:0042802;identical protein binding;0.00197334490374332!GO:0015980;energy derivation by oxidation of organic compounds;0.0019827867310574!GO:0043209;myelin sheath;0.00217570459085292!GO:0006470;protein amino acid dephosphorylation;0.00224369897948096!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00228017941771369!GO:0006644;phospholipid metabolic process;0.00230922395665913!GO:0031968;organelle outer membrane;0.00231729982816464!GO:0007243;protein kinase cascade;0.00240796181734819!GO:0005791;rough endoplasmic reticulum;0.00242800367770818!GO:0003724;RNA helicase activity;0.00269346187680172!GO:0043038;amino acid activation;0.0027331405106359!GO:0006418;tRNA aminoacylation for protein translation;0.0027331405106359!GO:0043039;tRNA aminoacylation;0.0027331405106359!GO:0005765;lysosomal membrane;0.00278304628819719!GO:0005741;mitochondrial outer membrane;0.00278304628819719!GO:0003697;single-stranded DNA binding;0.00282118991655887!GO:0001508;regulation of action potential;0.00290541321396941!GO:0008601;protein phosphatase type 2A regulator activity;0.00290541321396941!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00292182138182311!GO:0004386;helicase activity;0.00294236551456!GO:0022890;inorganic cation transmembrane transporter activity;0.00307265585430441!GO:0019717;synaptosome;0.00324952055203592!GO:0030384;phosphoinositide metabolic process;0.00326421460340813!GO:0006629;lipid metabolic process;0.00342743567531156!GO:0008154;actin polymerization and/or depolymerization;0.00346392520556592!GO:0030041;actin filament polymerization;0.00362358201556703!GO:0006891;intra-Golgi vesicle-mediated transport;0.0037127260545644!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00373864252969868!GO:0048468;cell development;0.00386426267757524!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.003951003818524!GO:0019208;phosphatase regulator activity;0.00397599794645594!GO:0031114;regulation of microtubule depolymerization;0.00408477122943566!GO:0007026;negative regulation of microtubule depolymerization;0.00408477122943566!GO:0051726;regulation of cell cycle;0.00418514892925!GO:0046474;glycerophospholipid biosynthetic process;0.00435223458016469!GO:0016740;transferase activity;0.00437504577235035!GO:0005099;Ras GTPase activator activity;0.00451444899832348!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00451508623792461!GO:0048487;beta-tubulin binding;0.00451977582367519!GO:0000074;regulation of progression through cell cycle;0.00469988509278467!GO:0046578;regulation of Ras protein signal transduction;0.00481002018312401!GO:0046930;pore complex;0.00484068075825267!GO:0005938;cell cortex;0.00503789410834989!GO:0008361;regulation of cell size;0.00509318999854951!GO:0016050;vesicle organization and biogenesis;0.00535038274764634!GO:0051920;peroxiredoxin activity;0.00541292323460146!GO:0044437;vacuolar part;0.00545717880213464!GO:0004722;protein serine/threonine phosphatase activity;0.00566308225198449!GO:0043087;regulation of GTPase activity;0.0058093052288079!GO:0050811;GABA receptor binding;0.00581871282349725!GO:0005839;proteasome core complex (sensu Eukaryota);0.00666051106088804!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00730206667451679!GO:0004667;prostaglandin-D synthase activity;0.00730206667451679!GO:0050802;circadian sleep/wake cycle, sleep;0.00730206667451679!GO:0022410;circadian sleep/wake cycle process;0.00730206667451679!GO:0042749;regulation of circadian sleep/wake cycle;0.00730206667451679!GO:0051087;chaperone binding;0.00730413020129772!GO:0042578;phosphoric ester hydrolase activity;0.00740126249815704!GO:0006607;NLS-bearing substrate import into nucleus;0.00748866768596496!GO:0007034;vacuolar transport;0.00757251708338287!GO:0007017;microtubule-based process;0.00758679593847802!GO:0042552;myelination;0.00824712354006176!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00832772778708203!GO:0007266;Rho protein signal transduction;0.00866469193249857!GO:0016049;cell growth;0.00869383639214067!GO:0006695;cholesterol biosynthetic process;0.00879261384441749!GO:0008286;insulin receptor signaling pathway;0.0088397593726461!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0090308669895523!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00941552062127476!GO:0051276;chromosome organization and biogenesis;0.00963257364558865!GO:0046489;phosphoinositide biosynthetic process;0.00978171850744581!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00990670973063288!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00990670973063288!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00990670973063288!GO:0009108;coenzyme biosynthetic process;0.0099796905775056!GO:0006672;ceramide metabolic process;0.0100756526875043!GO:0051427;hormone receptor binding;0.010187304222751!GO:0009117;nucleotide metabolic process;0.0102855825682141!GO:0030532;small nuclear ribonucleoprotein complex;0.0107044956971926!GO:0006665;sphingolipid metabolic process;0.0109701811811858!GO:0005885;Arp2/3 protein complex;0.0110862072240713!GO:0031109;microtubule polymerization or depolymerization;0.0115836329980435!GO:0046519;sphingoid metabolic process;0.0118841567770755!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0122548422107843!GO:0050767;regulation of neurogenesis;0.012330837196179!GO:0008186;RNA-dependent ATPase activity;0.0123605177708561!GO:0005869;dynactin complex;0.0126172990422083!GO:0007049;cell cycle;0.0126397860049699!GO:0000059;protein import into nucleus, docking;0.0127235734025724!GO:0008250;oligosaccharyl transferase complex;0.0128228923799034!GO:0006401;RNA catabolic process;0.0130625123162908!GO:0019888;protein phosphatase regulator activity;0.0132175731920403!GO:0016363;nuclear matrix;0.0134529823722123!GO:0030132;clathrin coat of coated pit;0.0136544776170664!GO:0048500;signal recognition particle;0.0138106426448196!GO:0019904;protein domain specific binding;0.0141167824522076!GO:0030139;endocytic vesicle;0.0145330093400677!GO:0051287;NAD binding;0.0149615065493161!GO:0065007;biological regulation;0.0155627548183009!GO:0005100;Rho GTPase activator activity;0.0156539385245556!GO:0043488;regulation of mRNA stability;0.0156719536935752!GO:0043487;regulation of RNA stability;0.0156719536935752!GO:0043254;regulation of protein complex assembly;0.016429026569245!GO:0035035;histone acetyltransferase binding;0.0165137356127371!GO:0035257;nuclear hormone receptor binding;0.0166793152613512!GO:0043021;ribonucleoprotein binding;0.0167877188186816!GO:0043005;neuron projection;0.0167877188186816!GO:0005813;centrosome;0.0173508126350486!GO:0051789;response to protein stimulus;0.0176705718781228!GO:0006986;response to unfolded protein;0.0176705718781228!GO:0007041;lysosomal transport;0.0183329305500924!GO:0007033;vacuole organization and biogenesis;0.0183898452698201!GO:0033116;ER-Golgi intermediate compartment membrane;0.0183898452698201!GO:0015629;actin cytoskeleton;0.0184443649298004!GO:0004680;casein kinase activity;0.0188980980909678!GO:0004113;2',3'-cyclic-nucleotide 3'-phosphodiesterase activity;0.0188980980909678!GO:0009214;cyclic nucleotide catabolic process;0.0188980980909678!GO:0005788;endoplasmic reticulum lumen;0.0188980980909678!GO:0012506;vesicle membrane;0.0191190746700784!GO:0042981;regulation of apoptosis;0.0192617256768065!GO:0046839;phospholipid dephosphorylation;0.0192617256768065!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0192870459293625!GO:0030258;lipid modification;0.01976456448979!GO:0033673;negative regulation of kinase activity;0.019991370469521!GO:0006469;negative regulation of protein kinase activity;0.019991370469521!GO:0051539;4 iron, 4 sulfur cluster binding;0.0201060377530966!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0201060377530966!GO:0055083;monovalent inorganic anion homeostasis;0.0201060377530966!GO:0055064;chloride ion homeostasis;0.0201060377530966!GO:0030644;cellular chloride ion homeostasis;0.0201060377530966!GO:0005048;signal sequence binding;0.0201639419793351!GO:0042158;lipoprotein biosynthetic process;0.0204707931108982!GO:0019903;protein phosphatase binding;0.0204707931108982!GO:0046488;phosphatidylinositol metabolic process;0.0219117741903332!GO:0043067;regulation of programmed cell death;0.0221451200060152!GO:0008139;nuclear localization sequence binding;0.0226961881439801!GO:0030658;transport vesicle membrane;0.0230807209436346!GO:0006904;vesicle docking during exocytosis;0.0231599563019277!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0232092810256078!GO:0022406;membrane docking;0.0232167165364405!GO:0048278;vesicle docking;0.0232167165364405!GO:0042254;ribosome biogenesis and assembly;0.023364207323278!GO:0006611;protein export from nucleus;0.023364207323278!GO:0030660;Golgi-associated vesicle membrane;0.023364207323278!GO:0050435;beta-amyloid metabolic process;0.0242709867578858!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0243152788795979!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0243152788795979!GO:0045047;protein targeting to ER;0.0243152788795979!GO:0019783;small conjugating protein-specific protease activity;0.0244470116403844!GO:0006414;translational elongation;0.0246008988330175!GO:0004674;protein serine/threonine kinase activity;0.0247952968589093!GO:0015682;ferric iron transport;0.0249385253162314!GO:0015091;ferric iron transmembrane transporter activity;0.0249385253162314!GO:0031643;positive regulation of myelination;0.0249385253162314!GO:0004298;threonine endopeptidase activity;0.0250700971266838!GO:0016563;transcription activator activity;0.0250700971266838!GO:0051348;negative regulation of transferase activity;0.0250915780084285!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.025126901290082!GO:0016125;sterol metabolic process;0.0254338929309138!GO:0030426;growth cone;0.0254338929309138!GO:0019201;nucleotide kinase activity;0.0255735275679501!GO:0065009;regulation of a molecular function;0.0258607151955872!GO:0051252;regulation of RNA metabolic process;0.0258740703539204!GO:0016301;kinase activity;0.0263324232588063!GO:0030137;COPI-coated vesicle;0.0264188516846567!GO:0051540;metal cluster binding;0.0264188516846567!GO:0051536;iron-sulfur cluster binding;0.0264188516846567!GO:0005868;cytoplasmic dynein complex;0.0265856200498886!GO:0005815;microtubule organizing center;0.0269066323805039!GO:0030663;COPI coated vesicle membrane;0.0270993198716198!GO:0030126;COPI vesicle coat;0.0270993198716198!GO:0004576;oligosaccharyl transferase activity;0.0283580811723282!GO:0000118;histone deacetylase complex;0.0285427765310886!GO:0004843;ubiquitin-specific protease activity;0.0285427765310886!GO:0004004;ATP-dependent RNA helicase activity;0.0289840860450935!GO:0019911;structural constituent of myelin sheath;0.0290605717733157!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0291075489600466!GO:0006509;membrane protein ectodomain proteolysis;0.0295283074443248!GO:0033619;membrane protein proteolysis;0.0295283074443248!GO:0030427;site of polarized growth;0.0296327902232967!GO:0030742;GTP-dependent protein binding;0.0298119731827294!GO:0008022;protein C-terminus binding;0.0298482429173624!GO:0006497;protein amino acid lipidation;0.030763964618531!GO:0016579;protein deubiquitination;0.0309544606387002!GO:0004221;ubiquitin thiolesterase activity;0.031426609758755!GO:0003690;double-stranded DNA binding;0.0316132936527405!GO:0008312;7S RNA binding;0.0316563297102224!GO:0003746;translation elongation factor activity;0.0319701728420324!GO:0007040;lysosome organization and biogenesis;0.0320843651486375!GO:0007050;cell cycle arrest;0.0323481264113943!GO:0006595;polyamine metabolic process;0.0327054803319669!GO:0044433;cytoplasmic vesicle part;0.033416521796517!GO:0051261;protein depolymerization;0.0335069808834593!GO:0044448;cell cortex part;0.0344158396804679!GO:0000287;magnesium ion binding;0.0345774481829329!GO:0005667;transcription factor complex;0.0347038587604935!GO:0006633;fatty acid biosynthetic process;0.0347038587604935!GO:0009066;aspartate family amino acid metabolic process;0.0351011635679567!GO:0016408;C-acyltransferase activity;0.0356309766853722!GO:0007006;mitochondrial membrane organization and biogenesis;0.0359971352089353!GO:0019752;carboxylic acid metabolic process;0.0364732821834837!GO:0006516;glycoprotein catabolic process;0.0368997560178115!GO:0006376;mRNA splice site selection;0.0380653557034454!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0380653557034454!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0380653557034454!GO:0000062;acyl-CoA binding;0.0383467722191984!GO:0031124;mRNA 3'-end processing;0.0385358882890631!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0385358882890631!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0385358882890631!GO:0030880;RNA polymerase complex;0.0388831337699504!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0388831337699504!GO:0015248;sterol transporter activity;0.0391052122142745!GO:0006661;phosphatidylinositol biosynthetic process;0.0391464199906065!GO:0004364;glutathione transferase activity;0.0391464199906065!GO:0006082;organic acid metabolic process;0.0399887555980825!GO:0030031;cell projection biogenesis;0.0407013095802805!GO:0044262;cellular carbohydrate metabolic process;0.0407330463794701!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0420007234358045!GO:0030176;integral to endoplasmic reticulum membrane;0.0423499302325977!GO:0030119;AP-type membrane coat adaptor complex;0.0434479015990112!GO:0030131;clathrin adaptor complex;0.0435026394562616!GO:0016491;oxidoreductase activity;0.0438479552225668!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0442602359589237!GO:0001578;microtubule bundle formation;0.0442618123628312!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0447484533666085!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0470458923781496!GO:0005092;GDP-dissociation inhibitor activity;0.0474790787773981!GO:0001887;selenium metabolic process;0.0493605769000077
|sample_id=10042
|sample_note=
|sample_sex=mixed
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=corpus callosum
|top_motifs=SOX2:4.42941571667;SOX5:4.34228394107;SOX{8,9,10}:3.58666692924;NFIX:3.380899961;NKX3-2:3.08778119262;RREB1:2.9976571244;ZFP161:2.84812791704;NHLH1,2:2.77911881394;RFX1:2.71125387275;HIC1:2.61396092151;RFX2..5_RFXANK_RFXAP:2.60474477281;MED-1{core}:2.59696033893;REST:2.5908109832;SOX17:2.57126774944;MYFfamily:2.3901985566;EP300:2.29832704973;ATF2:2.29574215437;TFAP2B:2.23622305731;ZBTB6:2.18569588909;MTE{core}:2.17377966716;PATZ1:2.13659958769;SMAD1..7,9:2.10092121081;GTF2I:2.07697180999;PRRX1,2:2.04916003567;ZNF423:2.02612962688;PAX5:1.99353294489;HBP1_HMGB_SSRP1_UBTF:1.99326625556;EBF1:1.95315923027;MTF1:1.95251908088;LMO2:1.94107517388;XBP1:1.92444672083;NANOG:1.91750033245;JUN:1.85558702101;TGIF1:1.84563892653;MZF1:1.84443647132;SP1:1.82084062563;CUX2:1.80093794386;LEF1_TCF7_TCF7L1,2:1.79925064536;MAZ:1.79422936337;RBPJ:1.78889719904;MAFB:1.75495532646;TFAP2{A,C}:1.73393770609;EGR1..3:1.71286911994;GATA4:1.65240357049;GTF2A1,2:1.62662855994;FOXO1,3,4:1.59661618896;TLX1..3_NFIC{dimer}:1.58497461103;FOX{D1,D2}:1.58088620037;GCM1,2:1.55313156013;SREBF1,2:1.54914730536;MYBL2:1.51211772635;PRDM1:1.48701723993;HOX{A6,A7,B6,B7}:1.46680785069;AR:1.41040755065;BREu{core}:1.37481807595;FOX{F1,F2,J1}:1.35169295642;OCT4_SOX2{dimer}:1.29731255255;POU5F1:1.27008772915;PAX6:1.26642765993;VSX1,2:1.26375013839;BPTF:1.26115944495;POU6F1:1.25514381927;NR3C1:1.24907832259;FOXP3:1.22766583143;DBP:1.14261314262;ESRRA:1.12686476852;NRF1:1.11177564816;SPZ1:1.05452633273;ZNF143:0.966747197038;TLX2:0.959967916608;ZIC1..3:0.913263022829;KLF4:0.802705393618;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.732043557977;TFDP1:0.693242030913;TFCP2:0.643837072242;GFI1B:0.638899639834;XCPE1{core}:0.628798427888;ZNF238:0.615338212384;FOXP1:0.600486293836;FOXQ1:0.589322185978;NKX2-3_NKX2-5:0.587654326937;RORA:0.582308857235;FOXA2:0.581599767346;ARID5B:0.575234483725;CREB1:0.559856356629;FOXM1:0.553210689624;MEF2{A,B,C,D}:0.551905097393;NFY{A,B,C}:0.545487991924;IRF7:0.511035606625;HMX1:0.499562321853;GFI1:0.480135192745;STAT1,3:0.455955131883;PDX1:0.441488511589;HOX{A4,D4}:0.438461172209;YY1:0.421045134796;FOX{I1,J2}:0.315495170065;TOPORS:0.309600768676;AHR_ARNT_ARNT2:0.299110525176;GZF1:0.263689604769;ZNF384:0.236000284674;MYOD1:0.220816250879;STAT2,4,6:0.200292184015;PAX2:0.183760974035;CRX:0.172208291371;PBX1:0.148853642585;TFAP4:0.0740166264303;NR5A1,2:0.0490128452947;NFIL3:0.0444299813167;IRF1,2:0.0385116403359;HAND1,2:0.027635980454;NFATC1..3:-0.088371140144;CDC5L:-0.107937565902;ATF5_CREB3:-0.112114850032;bHLH_family:-0.155596438477;ZEB1:-0.164386838603;HOXA9_MEIS1:-0.184946519386;ATF4:-0.19384400605;FOXN1:-0.197545915147;TBX4,5:-0.200085223461;GATA6:-0.212364434994;NKX6-1,2:-0.218712753006;HNF4A_NR2F1,2:-0.262610844662;FOXD3:-0.270376195344;LHX3,4:-0.281844681123;ONECUT1,2:-0.289142330901;TBP:-0.28937700866;ETS1,2:-0.292957352533;SPI1:-0.312523714616;RXR{A,B,G}:-0.329630814141;ESR1:-0.363455065655;ZNF148:-0.382795637341;TP53:-0.398259774375;HSF1,2:-0.400528523867;IKZF2:-0.449087467851;NFE2L2:-0.455206692639;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.470250353871;NANOG{mouse}:-0.474869710194;HNF1A:-0.517571648068;SPIB:-0.518257584807;TEAD1:-0.525542771239;NFE2:-0.526309819809;NFE2L1:-0.540887130835;SNAI1..3:-0.559447229192;T:-0.561620444694;SRF:-0.58068200461;ELK1,4_GABP{A,B1}:-0.589082240437;PITX1..3:-0.58925916868;POU3F1..4:-0.619658079005;IKZF1:-0.664261238047;ALX4:-0.671686585628;HES1:-0.686097519028;CEBPA,B_DDIT3:-0.718062015574;HLF:-0.745746039427;ADNP_IRX_SIX_ZHX:-0.773292032412;DMAP1_NCOR{1,2}_SMARC:-0.792557726289;ATF6:-0.794138882861;FOSL2:-0.83364770611;TAL1_TCF{3,4,12}:-0.840876271006;RUNX1..3:-0.855575891214;ELF1,2,4:-0.88810780209;FOS_FOS{B,L1}_JUN{B,D}:-0.940936416522;NFKB1_REL_RELA:-0.941594792594;HMGA1,2:-0.944394043431;BACH2:-0.950105446757;MYB:-1.03909667367;UFEwm:-1.06679225772;E2F1..5:-1.06966870926;PAX3,7:-1.07625740001;PAX8:-1.09986791816;POU2F1..3:-1.16999306204;NR1H4:-1.18884041864;GLI1..3:-1.29407035394;EN1,2:-1.31276826261;NKX2-1,4:-1.34976877009;ALX1:-1.40159100442;HIF1A:-1.40497143323;RXRA_VDR{dimer}:-1.4156485579;PAX1,9:-1.46131752209;PAX4:-1.48069881963;POU1F1:-1.50792867021;NKX2-2,8:-1.58945763742;EVI1:-1.64739244067;ZBTB16:-1.73471270962;NKX3-1:-1.76773982337;FOXL1:-1.7773828639;STAT5{A,B}:-1.83245149578;NR6A1:-1.95520687578;CDX1,2,4:-1.99470016939;AIRE:-2.04998345682;TEF:-2.08861159154;HOX{A5,B5}:-2.45956922274;PPARG:-2.5883002386
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10042-101F6;search_select_hide=table117:FF:10042-101F6
}}
}}

Latest revision as of 12:16, 3 June 2020

Name:corpus callosum, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10649
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuecorpus callosum
dev stage24-68 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyClontech
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number6080307
catalog numberCat:636567
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004735
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10649 CAGE DRX008640 DRR009512
Accession ID Hg19

Library idBAMCTSS
CNhs10649 DRZ000937 DRZ002322
Accession ID Hg38

Library idBAMCTSS
CNhs10649 DRZ012287 DRZ013672
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.104
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0801
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.364
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0.0283
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.587
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.168
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0283
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.132
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.0283
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0283
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.0283
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.0283
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0.429
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.383
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.0549
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0486
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.212
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.131
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.126
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0283
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.096
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.0549
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.104
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.122
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0.0283
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.84
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0283
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.224
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.147
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0283
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.08
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.0283
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.224
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0283
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.0549
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0721
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.0283
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.1
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.318
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0549
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.0283
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.0674
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.489
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.206
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.757
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.08
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.318
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.318
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0549
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.256
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.0283
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.0283
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.782
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.104
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.104
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0549
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10649

Jaspar motifP-value
MA0002.20.0413
MA0003.10.413
MA0004.10.316
MA0006.10.682
MA0007.10.4
MA0009.10.172
MA0014.10.722
MA0017.10.0185
MA0018.20.0439
MA0019.10.481
MA0024.10.705
MA0025.10.748
MA0027.10.378
MA0028.10.107
MA0029.10.25
MA0030.10.00107
MA0031.10.122
MA0035.20.24
MA0038.10.0201
MA0039.20.526
MA0040.10.18
MA0041.10.368
MA0042.10.595
MA0043.10.459
MA0046.10.367
MA0047.20.825
MA0048.10.0925
MA0050.10.166
MA0051.10.429
MA0052.10.0727
MA0055.10.00248
MA0057.10.864
MA0058.10.467
MA0059.10.05
MA0060.10.0209
MA0061.10.00268
MA0062.20.0361
MA0065.20.00307
MA0066.10.0122
MA0067.10.689
MA0068.10.997
MA0069.10.729
MA0070.10.148
MA0071.10.0323
MA0072.10.934
MA0073.10.63
MA0074.10.22
MA0076.10.284
MA0077.10.00129
MA0078.10.556
MA0079.20.363
MA0080.21.07771e-4
MA0081.10.0819
MA0083.10.379
MA0084.10.103
MA0087.10.026
MA0088.10.196
MA0090.10.303
MA0091.10.71
MA0092.10.334
MA0093.10.424
MA0099.23.97869e-13
MA0100.10.755
MA0101.10.00407
MA0102.20.245
MA0103.10.0393
MA0104.20.283
MA0105.12.70749e-6
MA0106.10.0146
MA0107.10.00298
MA0108.20.0188
MA0111.10.521
MA0112.20.00139
MA0113.10.439
MA0114.10.0201
MA0115.10.775
MA0116.16.48363e-4
MA0117.10.755
MA0119.10.0852
MA0122.10.369
MA0124.10.736
MA0125.10.152
MA0131.10.822
MA0135.10.00437
MA0136.11.48964e-6
MA0137.20.474
MA0138.20.248
MA0139.10.628
MA0140.10.197
MA0141.10.0152
MA0142.10.218
MA0143.10.0213
MA0144.10.592
MA0145.10.667
MA0146.10.0554
MA0147.10.116
MA0148.10.985
MA0149.10.00501
MA0150.13.3094e-4
MA0152.10.948
MA0153.10.875
MA0154.10.0346
MA0155.10.983
MA0156.16.06561e-4
MA0157.10.545
MA0159.10.0143
MA0160.10.0862
MA0162.10.16
MA0163.11.78658e-10
MA0164.10.612
MA0258.10.0243
MA0259.10.406



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10649

Novel motifP-value
10.0322
100.0224
1000.265
1010.792
1020.857
1030.0721
1040.179
1050.535
1060.0349
1070.226
1080.757
1090.00708
110.00855
1100.0381
1110.0325
1120.245
1130.465
1140.0502
1150.563
1160.193
1170.0145
1180.129
1190.12
120.769
1200.083
1210.956
1220.596
1230.549
1240.349
1250.388
1260.181
1270.448
1280.191
1290.533
130.00857
1300.803
1310.017
1320.443
1330.00732
1340.147
1350.128
1360.0135
1370.769
1380.764
1390.127
140.868
1400.163
1410.105
1420.656
1430.00891
1440.824
1450.286
1460.939
1470.684
1480.339
1490.441
150.0478
1500.126
1510.878
1520.154
1530.692
1540.521
1550.421
1560.482
1570.419
1580.239
1590.00492
160.0498
1600.183
1610.285
1620.962
1630.759
1640.00332
1650.152
1660.93
1670.442
1680.819
1690.0272
170.115
180.0411
190.441
20.786
200.105
210.0432
220.494
230.443
240.183
250.495
260.00449
270.726
280.85
290.00364
30.0271
300.436
310.993
320.00929
330.0778
340.889
350.355
360.117
370.036
380.415
390.443
41
400.155
410.482
420.182
430.117
440.0203
450.975
460.0251
470.0731
480.0644
490.225
50.925
500.62
510.438
520.918
530.574
540.661
550.698
560.608
570.201
580.35
590.169
60.69
600.131
610.157
620.15
630.347
640.121
650.305
660.283
670.297
680.735
690.42
70.164
700.0103
710.00669
720.445
730.0599
740.411
750.0121
760.128
770.302
787.15873e-4
790.146
80.0624
800.569
810.334
820.519
830.205
840.381
850.363
860.184
870.0076
880.687
890.281
90.776
900.0184
910.425
920.335
930.998
940.0288
950.0273
960.82
970.853
980.126
990.967



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10649


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0002336 (corpus callosum)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0005162 (multi cell component structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000122 (neuron projection bundle)
0011215 (central nervous system cell part cluster)
0001018 (axon tract)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002473 (intercerebral commissure)
0005340 (dorsal telencephalic commissure)
0003544 (brain white matter)
0005970 (brain commissure)
0002316 (white matter)
0010317 (germ layer / neural crest derived structure)
0001020 (nervous system commissure)
0001017 (central nervous system)
0001016 (nervous system)
0001893 (telencephalon)
0001890 (forebrain)
0002437 (cerebral hemisphere white matter)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010042 (human corpus callosum - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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