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{{f5samples
{{f5samples
|id=FF:11343-117G2
|DRA_sample_Accession=CAGE@SAMD00004966
|name=Endothelial Cells - Thoracic, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004966
|sample_id=11343
|accession_numbers=CAGE;DRX008230;DRR009102;DRZ000527;DRZ001912;DRZ011877;DRZ013262
|rna_tube_id=117G2
|accession_numbers_RNASeq=sRNA-Seq;DRX037078;DRR041444;DRZ007086
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000947,UBERON:0001637,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0000064,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0009569,UBERON:0004573,UBERON:0000487,UBERON:0005800,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001515,UBERON:0001917,UBERON:0004535,UBERON:0004571,UBERON:0010191,UBERON:0000915,UBERON:0004572,UBERON:0004537,UBERON:0001009
|rna_position=G2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413,CL:0002544,CL:0002545
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=1555
|rna_catalog_number=CA308-R10a
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=50 years old adult
|sample_tissue=internal thoracic artery
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=50
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=blood vessel endothelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.53
|sample_note=
|profile_hcage=CNhs11978,LSID836,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10006,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000071,CL:0000076,CL:0000115,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002078,CL:0002139,CL:0002321,CL:0002371,CL:0002544,CL:0002545,CL:0002546,CL:1000413
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000483,UBERON:0000487,UBERON:0000490,UBERON:0000915,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000947,UBERON:0001009,UBERON:0001062,UBERON:0001515,UBERON:0001637,UBERON:0001917,UBERON:0001981,UBERON:0001986,UBERON:0002049,UBERON:0002050,UBERON:0002532,UBERON:0003081,UBERON:0003509,UBERON:0003914,UBERON:0004111,UBERON:0004120,UBERON:0004535,UBERON:0004537,UBERON:0004571,UBERON:0004572,UBERON:0004573,UBERON:0004638,UBERON:0004700,UBERON:0004852,UBERON:0004872,UBERON:0005423,UBERON:0005800,UBERON:0006914,UBERON:0006965,UBERON:0007500,UBERON:0007798
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000047,FF:0000048,FF:0000001,FF:0000051
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.49!400.21!SOX18;;chr8:55370487..55370503,+!p1@SOX17!2.27!184.71!SOX17;;chr21:39870339..39870443,-!p1@ERG!2.10!124.76!ERG;;chr8:10588010..10588030,-!p1@SOX7!1.93!84.25!SOX7;;chr22:19748231..19748317,+!p1@TBX1!1.92!81.82!TBX1;;chr2:177053386..177053402,+!p1@HOXD1!1.88!75.34!HOXD1;;chr17:6926362..6926377,+!p1@BCL6B!1.88!74.53!BCL6B;;chr1:6479968..6479986,-!p1@HES2!1.85!70.48!HES2;;chr19:13213511..13213545,-!p2@LYL1!1.65!47.80!LYL1;;chr12:96588368..96588394,+!p3@ELK3!1.53!86.69!ELK3;;chr18:53068911..53068935,-!p4@TCF4!1.46!31.60!TCF4;;chr6:126070769..126070801,+!p1@HEY2!1.44!30.79!HEY2;;chr10:94449703..94449718,+!p1@HHEX!1.43!97.22!HHEX;;chr16:86600426..86600441,+!p1@FOXC2!1.43!62.38!FOXC2;;chr19:13213662..13213686,-!p1@LYL1!1.38!34.03!LYL1;;chr19:13213399..13213414,-!p6@LYL1!1.31!19.44!LYL1;;chr7:27205136..27205164,-!p1@HOXA9!1.26!17.01!HOXA9;;chr1:209979467..209979494,-!p1@IRF6!1.17!15.39!IRF6;;chr17:46655672..46655697,-!p3@HOXB4!1.17!13.77!HOXB4;;chr17:46688334..46688385,-!p1@HOXB7!1.14!18.63!HOXB7;;chr20:62680671..62680679,-!p2@SOX18!1.09!11.34!SOX18;;chr6:34204921..34204939,+!p3@HMGA1!1.07!327.30!HMGA1;;chr11:65429891..65429915,-!p7@RELA!1.06!10.53!RELA;;chr17:41622925..41622976,-!p3@ETV4!1.05!15.39!ETV4;;chr20:48599506..48599526,+!p1@SNAI1!1.01!60.76!SNAI1;;chr3:128206762..128206781,-!p2@GATA2!1.00!57.52!GATA2;;chr18:22932080..22932170,-!p1@ZNF521!1.00!38.89!ZNF521;;chr17:46682321..46682362,-!p1@HOXB6!1.00!8.91!HOXB6;;chr7:27205106..27205134,-!p2@HOXA9!1.00!8.91!HOXA9;;chr18:19749541..19749557,+!p1@GATA6!0.98!27.54!GATA6;;chr3:169381420..169381535,-!p1@MECOM!0.97!9.72!MECOM;;chr6:21593973..21593988,+!p1@SOX4!0.95!292.46!SOX4;;chr1:151032860..151032918,+!p1@MLLT11!0.94!93.98!MLLT11;;chr5:92918919..92918942,+!p1@NR2F1!0.93!34.84!NR2F1;;chr16:86601052..86601066,+!p4@FOXC2!0.92!7.29!FOXC2;;chr19:13213555..13213568,-!p5@LYL1!0.92!7.29!LYL1;;chr13:79177703..79177729,-!p2@POU4F1!0.92!7.29!POU4F1;;chr19:49865646..49865718,-!p1@TEAD2!0.91!63.19!TEAD2;;chr22:38597987..38598021,+!p2@MAFF!0.90!44.56!MAFF;;chr10:94449675..94449694,+!p2@HHEX!0.90!19.44!HHEX;;chr17:46655704..46655718,-!p2@HOXB4!0.90!10.53!HOXB4;;chr17:46687959..46688007,-!p2@HOXB7!0.90!9.72!HOXB7;;chr2:46524537..46524553,+!p1@EPAS1!0.89!703.20!EPAS1;;chr12:124873357..124873401,-!p1@NCOR2!0.89!81.82!NCOR2;;chr12:66218255..66218304,+!p3@HMGA2!0.88!18.63!HMGA2;;chr6:21594845..21594908,+!p6@SOX4!0.87!10.53!SOX4;;chr6:28321971..28321995,-!p1@ZNF323!0.87!6.48!ZNF323;;chr14:74256787..74256858,-!p6@C14orf43!0.87!6.48!C14orf43;;chr1:47695003..47695042,-!p2@TAL1!0.87!6.48!TAL1;;chr17:46690839..46690884,-!p1@HOXB8!0.87!6.48!HOXB8;;chr17:46691732..46691766,-!p4@HOXB8!0.87!6.48!HOXB8;;chr20:42543506..42543549,+!p2@TOX2!0.85!15.39!TOX2;;chr17:1958388..1958404,+!p1@HIC1!0.84!40.51!HIC1;;chr2:46602901..46602926,+!p7@EPAS1!0.84!8.10!EPAS1;;chr20:42543441..42543497,+!p1@TOX2!0.82!26.73!TOX2;;chr14:24837368..24837401,+!p1@NFATC4!0.82!13.77!NFATC4;;chr6:21597600..21597664,+!p3@SOX4!0.82!9.72!SOX4;;chr19:53496768..53496799,-!p1@ZNF702P!0.82!8.91!ZNF702P;;chr16:30406423..30406447,+!p4@ZNF48!0.82!5.67!ZNF48;;chr16:86600870..86600921,+!p2@FOXC2!0.82!5.67!FOXC2;;chr2:176994408..176994492,+!p1@HOXD8!0.82!5.67!HOXD8;;chr6:21597765..21597779,+!p2@SOX4!0.81!47.80!SOX4;;chr1:935467..935484,-!p1@HES4!0.80!25.11!HES4;;chr2:46602879..46602899,+!p8@EPAS1!0.80!6.48!EPAS1;;chr12:124873852..124873881,-!p3@NCOR2!0.79!34.03!NCOR2;;chr7:26191809..26191890,+!p1@NFE2L3!0.79!27.54!NFE2L3;;chr17:38498594..38498661,+!p2@RARA!0.79!18.63!RARA;;chr6:85474299..85474324,-!p1@TBX18!0.79!9.72!TBX18;;chr19:49864746..49864780,-!p2@TEAD2!0.79!7.29!TEAD2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.77!379.96!TAX1BP3;;chr6:21597370..21597408,+!p5@SOX4!0.77!8.10!SOX4;;chr3:25469724..25469773,+!p1@RARB!0.77!7.29!RARB;;chr3:169381183..169381205,-!p4@MECOM!0.77!4.86!MECOM;;chr7:27183291..27183324,-!p1@HOXA5!0.77!4.86!HOXA5;;chr8:55370720..55370733,+!p2@SOX17!0.77!4.86!SOX17;;chr16:86601088..86601105,+!p5@FOXC2!0.77!4.86!FOXC2;;chr19:13213465..13213478,-!p7@LYL1!0.77!4.86!LYL1;;chr19:9732460..9732472,-!p2@ZNF561!0.77!4.86!ZNF561;;chr9:16705069..16705086,-!p3@BNC2!0.77!4.86!BNC2;;chr4:2263809..2263854,-!p1@MXD4!0.76!204.16!MXD4;;chr14:74226961..74227020,-!p1@C14orf43!0.75!34.03!C14orf43;;chr3:168864315..168864339,-!p2@MECOM!0.75!8.10!MECOM;;chr1:935496..935509,-!p3@HES4!0.75!7.29!HES4;;chr19:1652555..1652568,-!p2@TCF3!0.74!20.25!TCF3;;chr1:23885981..23886002,-!p1@ID3!0.72!841.74!ID3;;chr12:66218598..66218645,+!p2@HMGA2!0.72!21.87!HMGA2;;chr6:126240380..126240430,+!p2@NCOA7!0.72!12.15!NCOA7;;chr12:80084137..80084165,-!p10@PAWR!0.72!5.67!PAWR;;chr12:66218836..66218888,+!p1@HMGA2!0.71!43.75!HMGA2;;chr3:178789522..178789564,-!p2@ZMAT3!0.71!34.03!ZMAT3;;chr13:72441315..72441454,-!p1@DACH1!0.71!8.91!DACH1;;chr3:170076314..170076334,+!p2@SKIL!0.71!5.67!SKIL;;chr3:25469815..25469866,+!p3@RARB!0.70!4.05!RARB;;chr3:25470062..25470084,+!p4@RARB!0.70!4.05!RARB;;chr3:25470156..25470227,+!p2@RARB!0.70!4.05!RARB;;chr6:126070748..126070768,+!p2@HEY2!0.70!4.05!HEY2;;chr7:27192185..27192209,-!p1@HOXA3!0.70!4.05!HOXA3;;chr17:46622175..46622186,-!p12@HOXB2!0.70!4.05!HOXB2;;chr17:46687935..46687950,-!p3@HOXB7!0.70!4.05!HOXB7;;chr17:46688310..46688323,-!p4@HOXB7!0.70!4.05!HOXB7;;chr12:66218003..66218018,+!p9@HMGA2!0.69!4.86!HMGA2;;chr17:7590797..7590815,-!p1@TP53!0.68!191.19!TP53;;chr12:80084167..80084197,-!p5@PAWR!0.68!9.72!PAWR;;chr11:65430554..65430579,-!p3@RELA!0.67!10.53!RELA;;chr11:65687362..65687436,+!p3@DRAP1!0.66!18.63!DRAP1;;chr17:46622440..46622477,-!p5@HOXB2!0.66!4.05!HOXB2;;chr1:120190786..120190915,-!p1@ZNF697!0.65!29.17!ZNF697;;chr12:66218183..66218209,+!p4@HMGA2!0.65!7.29!HMGA2;;chr13:41240717..41240735,-!p2@FOXO1!0.64!26.73!FOXO1;;chr20:2673383..2673441,+!p1@EBF4!0.64!5.67!EBF4;;chr11:62368696..62368759,-!p4@MTA2!0.63!23.49!MTA2;;chr9:116638565..116638606,+!p1@ZNF618!0.63!16.20!ZNF618;;chr5:92918894..92918912,+!p2@NR2F1!0.63!12.15!NR2F1;;chr5:92918768..92918783,+!p8@NR2F1!0.63!3.24!NR2F1;;chr7:139741594..139741615,-!p5@PARP12!0.63!3.24!PARP12;;chr7:1577899..1577943,+!p3@MAFK!0.63!3.24!MAFK;;chr16:86600458..86600461,+!p3@FOXC2!0.63!3.24!FOXC2;;chr17:46659728..46659749,-!p3@HOXB3!0.63!3.24!HOXB3;;chr17:6926381..6926392,+!p2@BCL6B!0.63!3.24!BCL6B;;chr18:22932004..22932021,-!p2@ZNF521!0.63!3.24!ZNF521;;chr18:53068982..53068993,-!p20@TCF4!0.63!3.24!TCF4;;chr18:53256971..53256984,-!p26@TCF4!0.63!3.24!TCF4;;chr19:13213496..13213501,-!p10@LYL1!0.63!3.24!LYL1;;chr9:14083091..14083096,-!p12@NFIB!0.63!3.24!NFIB;;chrY:21906594..21906622,-!p1@KDM5D!0.63!3.24!KDM5D;;chr22:19747040..19747054,+!p3@TBX1!0.63!3.24!TBX1;;chr2:176987441..176987454,+!p1@HOXD9!0.63!3.24!HOXD9;;chr2:237077022..237077038,-!p1@GBX2!0.63!3.24!GBX2;;chr12:124873824..124873833,-!p19@NCOR2!0.63!3.24!NCOR2;;chr19:46801639..46801699,+!p1@HIF3A!0.63!3.24!HIF3A;;chr20:42602000..42602034,+!p5@TOX2!0.63!3.24!TOX2;;chr3:141087393..141087426,+!p3@ZBTB38!0.62!14.58!ZBTB38;;chr19:56152332..56152347,+!p4@ZNF580!0.62!8.10!ZNF580;;chr2:231280954..231280965,+!p2@SP100!0.62!6.48!SP100;;chr6:10415276..10415341,-!p2@TFAP2A!0.62!4.05!TFAP2A;;chr19:42759266..42759290,-!p1@ERF!0.61!119.09!ERF;;chr15:96873984..96873999,+!p3@NR2F2!0.61!26.73!NR2F2;;chr9:35732647..35732678,+!p2@CREB3!0.61!20.25!CREB3;;chr6:21597514..21597578,+!p4@SOX4!0.61!5.67!SOX4;;chr19:45908292..45908374,-!p1@PPP1R13L!0.60!31.60!PPP1R13L;;chr3:52001426..52001447,-!p3@PCBP4!0.60!9.72!PCBP4;;chr8:106330656..106330684,+!p1@ZFPM2!0.60!8.91!ZFPM2;;chr18:53257001..53257015,-!p5@TCF4!0.60!5.67!TCF4;;chr17:41623692..41623715,-!p1@ETV4!0.59!14.58!ETV4;;chr8:128749984..128750033,+!p4@MYC!0.59!12.15!MYC;;chr17:46622070..46622109,-!p1@HOXB2!0.59!7.29!HOXB2;;chr12:53574398..53574412,+!p3@ZNF740!0.59!5.67!ZNF740;;chr8:145159277..145159282,+!p7@MAF1!0.59!4.86!MAF1;;chr17:46622114..46622138,-!p4@HOXB2!0.59!4.86!HOXB2;;chr3:52001448..52001478,-!p2@PCBP4!0.58!47.80!PCBP4;;chr4:2263861..2263883,-!p2@MXD4!0.58!20.25!MXD4;;chr1:156470515..156470542,-!p2@MEF2D!0.58!17.82!MEF2D;;chr1:151032833..151032850,+!p3@MLLT11!0.58!7.29!MLLT11;;chr19:19303047..19303079,+!p3@RFXANK!0.58!7.29!RFXANK;;chr1:221052776..221052799,+!p1@HLX!0.58!5.67!HLX;;chr19:56671612..56671626,+!p4@ZNF444!0.58!4.86!ZNF444;;chr2:85360499..85360598,+!p1@TCF7L1!0.57!18.63!TCF7L1;;chr9:14314131..14314147,-!p2@NFIB!0.57!18.63!NFIB;;chr7:148892557..148892580,+!p4@ZNF282!0.57!8.91!ZNF282;;chr2:74375081..74375092,-!p2@BOLA3!0.57!6.48!BOLA3;;chr11:65430535..65430549,-!p4@RELA!0.57!3.24!RELA;;chr15:83953397..83953425,-!p1@BNC1!0.57!3.24!BNC1;;chr17:46622205..46622218,-!p3@HOXB2!0.57!3.24!HOXB2;;chr17:46675420..46675465,-!p3@HOXB6!0.57!3.24!HOXB6;;chr19:19303794..19303805,+!p5@RFXANK!0.57!3.24!RFXANK;;chr11:128563948..128564003,+!p1@FLI1!0.56!39.70!FLI1;;chr15:66994561..66994597,+!p2@SMAD6!0.56!7.29!SMAD6;;chr1:151032922..151032951,+!p2@MLLT11!0.56!4.86!MLLT11;;chr9:14082760..14082775,-!p6@NFIB!0.56!4.86!NFIB;;chr4:146436110..146436135,+!p6@SMAD1!0.56!4.05!SMAD1;;chr8:145159846..145159889,+!p6@MAF1!0.56!4.05!MAF1;;chr8:80679993..80680011,-!p1@HEY1!0.55!4.05!HEY1;;chr6:85473156..85473210,-!p2@TBX18!0.55!3.24!TBX18;;chr17:41622834..41622883,-!p6@ETV4!0.55!3.24!ETV4;;chr19:19303731..19303783,+!p1@RFXANK!0.54!74.53!RFXANK;;chr7:149470641..149470694,-!p1@ZNF467!0.54!13.77!ZNF467;;chr19:56111680..56111716,+!p1@ZNF524!0.54!11.34!ZNF524;;chr1:151032782..151032801,+!p4@MLLT11!0.54!5.67!MLLT11;;chr15:90544532..90544563,+!p1@ZNF710!0.54!5.67!ZNF710;;chr1:151032739..151032748,+!p6@MLLT11!0.54!3.24!MLLT11;;chr6:43140095..43140145,+!p5@SRF!0.54!3.24!SRF;;chr7:27183263..27183284,-!p2@HOXA5!0.54!2.43!HOXA5;;chr7:35293685..35293718,-!p1@TBX20!0.54!2.43!TBX20;;chr8:30890810..30890880,-!p1@PURG!0.54!2.43!PURG;;chr8:55370884..55370896,+!p5@SOX17!0.54!2.43!SOX17;;chr15:66994523..66994541,+!p5@SMAD6!0.54!2.43!SMAD6;;chr18:53068893..53068902,-!p28@TCF4!0.54!2.43!TCF4;;chr19:13136057..13136085,+!p11@NFIX!0.54!2.43!NFIX;;chr12:66218420..66218439,+!p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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000071;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000115;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002139;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002544;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002545;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:1000413;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000487;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000947;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001637;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001981;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004573;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0006914;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798
|ffid_belonging_in_development=CL:0002546,CL:0000222
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
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|rna_box=117
|rna_catalog_number=CA308-R10a
|rna_concentration=0.53
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=1555
|rna_od260/230=
|rna_od260/280=
|rna_position=G2
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=117G2
|rna_weight_ug=10
|rnaseq_library_id=SRhi10006.AGTCAA
|sample_age=50
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=blood vessel endothelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=50 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.6557810889316e-210!GO:0005737;cytoplasm;2.78293427134986e-184!GO:0043226;organelle;2.13893191407353e-155!GO:0043229;intracellular organelle;4.17521740677285e-155!GO:0043231;intracellular membrane-bound organelle;7.41588643657407e-150!GO:0043227;membrane-bound organelle;1.38907886264684e-149!GO:0044444;cytoplasmic part;3.73632694386558e-136!GO:0044422;organelle part;3.17005069148364e-119!GO:0044446;intracellular organelle part;5.50574165247774e-118!GO:0005515;protein binding;3.13435556562074e-84!GO:0032991;macromolecular complex;6.66187365302312e-84!GO:0030529;ribonucleoprotein complex;9.75804080343555e-77!GO:0044238;primary metabolic process;9.64148145307365e-70!GO:0044237;cellular metabolic process;3.01935098337964e-69!GO:0005739;mitochondrion;5.4473556581939e-64!GO:0043170;macromolecule metabolic process;6.60396199698468e-64!GO:0043233;organelle lumen;2.16909135325312e-59!GO:0031974;membrane-enclosed lumen;2.16909135325312e-59!GO:0003723;RNA binding;1.66740561363664e-56!GO:0019538;protein metabolic process;3.27428353751209e-53!GO:0005840;ribosome;1.41745188925637e-51!GO:0044428;nuclear part;1.43416894585243e-50!GO:0031090;organelle membrane;1.75036879679832e-50!GO:0044260;cellular macromolecule metabolic process;3.03382711722179e-47!GO:0044267;cellular protein metabolic process;4.92424637554802e-47!GO:0006412;translation;4.64554802757948e-46!GO:0003735;structural constituent of ribosome;1.67882436151015e-45!GO:0005634;nucleus;5.15384040630253e-45!GO:0016043;cellular component organization and biogenesis;1.54983465984047e-42!GO:0044429;mitochondrial part;2.02131981270865e-42!GO:0043234;protein complex;1.59550520673154e-41!GO:0033279;ribosomal subunit;2.01108029874686e-39!GO:0005829;cytosol;5.26688124225774e-39!GO:0009058;biosynthetic process;4.14173163460333e-37!GO:0009059;macromolecule biosynthetic process;5.68547161471468e-37!GO:0044249;cellular biosynthetic process;2.47007839489923e-36!GO:0006396;RNA processing;1.7309561025011e-35!GO:0015031;protein transport;4.9821346223553e-35!GO:0031967;organelle envelope;6.85103506025706e-35!GO:0033036;macromolecule localization;1.26936834886869e-34!GO:0031975;envelope;1.44469187676734e-34!GO:0031981;nuclear lumen;1.55214265664232e-33!GO:0045184;establishment of protein localization;1.48623106557948e-32!GO:0008104;protein localization;2.56264006994344e-32!GO:0043283;biopolymer metabolic process;1.83759804461892e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.74941021235321e-29!GO:0005740;mitochondrial envelope;3.56343052173511e-29!GO:0016071;mRNA metabolic process;2.11053317682365e-28!GO:0046907;intracellular transport;1.33903520353216e-27!GO:0031966;mitochondrial membrane;2.66722784626442e-27!GO:0043228;non-membrane-bound organelle;3.82266749133852e-27!GO:0043232;intracellular non-membrane-bound organelle;3.82266749133852e-27!GO:0065003;macromolecular complex assembly;4.35882519165667e-27!GO:0006996;organelle organization and biogenesis;2.07361907524475e-26!GO:0019866;organelle inner membrane;2.36968809645664e-26!GO:0008380;RNA splicing;2.66960576952291e-26!GO:0010467;gene expression;1.06070142391996e-25!GO:0005743;mitochondrial inner membrane;1.23692745923593e-24!GO:0006886;intracellular protein transport;2.81340973421844e-24!GO:0006397;mRNA processing;3.06964933150525e-24!GO:0044445;cytosolic part;3.23705080240577e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.4582157456011e-24!GO:0022607;cellular component assembly;8.97178234988353e-24!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.73307470078538e-22!GO:0006119;oxidative phosphorylation;1.10182030406138e-21!GO:0015934;large ribosomal subunit;1.40276308829029e-20!GO:0012505;endomembrane system;4.31710774054398e-20!GO:0005654;nucleoplasm;6.88623302966392e-20!GO:0015935;small ribosomal subunit;7.57022526994669e-20!GO:0044455;mitochondrial membrane part;7.71431979808505e-20!GO:0005794;Golgi apparatus;8.56589940937352e-20!GO:0005783;endoplasmic reticulum;2.50894036312599e-19!GO:0005681;spliceosome;6.92999508848649e-19!GO:0016462;pyrophosphatase activity;1.18590906671398e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.41647156013294e-18!GO:0000166;nucleotide binding;1.55058163687758e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;1.68210084265199e-18!GO:0017111;nucleoside-triphosphatase activity;1.71523892451201e-18!GO:0051649;establishment of cellular localization;2.56794836933269e-18!GO:0051641;cellular localization;4.05148166088058e-18!GO:0006457;protein folding;8.28063972572258e-18!GO:0005746;mitochondrial respiratory chain;9.91906061343863e-17!GO:0006259;DNA metabolic process;1.20064391683615e-16!GO:0044451;nucleoplasm part;1.78364104523479e-16!GO:0008134;transcription factor binding;2.09040830033525e-16!GO:0044432;endoplasmic reticulum part;2.12186016489144e-16!GO:0031980;mitochondrial lumen;2.25305254695623e-16!GO:0005759;mitochondrial matrix;2.25305254695623e-16!GO:0048770;pigment granule;1.05610130022566e-15!GO:0042470;melanosome;1.05610130022566e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.78847172216689e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.28067887185775e-15!GO:0016874;ligase activity;2.30643118714534e-15!GO:0043285;biopolymer catabolic process;4.13297408303491e-15!GO:0043412;biopolymer modification;5.83600717187007e-15!GO:0006512;ubiquitin cycle;6.48131263649227e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.00718276298653e-14!GO:0003954;NADH dehydrogenase activity;1.00718276298653e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.00718276298653e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.029900311783e-14!GO:0005730;nucleolus;1.13002921925313e-14!GO:0044265;cellular macromolecule catabolic process;1.70919540843299e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.76334045174604e-14!GO:0009057;macromolecule catabolic process;1.86646885361309e-14!GO:0016192;vesicle-mediated transport;2.08622127269736e-14!GO:0012501;programmed cell death;3.09506205864161e-14!GO:0022618;protein-RNA complex assembly;3.18526073387917e-14!GO:0006464;protein modification process;4.19671972761092e-14!GO:0006915;apoptosis;4.42745807028964e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.65294491319631e-14!GO:0006605;protein targeting;4.79248141721624e-14!GO:0032553;ribonucleotide binding;5.20503651877655e-14!GO:0032555;purine ribonucleotide binding;5.20503651877655e-14!GO:0017076;purine nucleotide binding;6.85436207050588e-14!GO:0051186;cofactor metabolic process;8.51400824562794e-14!GO:0005761;mitochondrial ribosome;1.3669755508579e-13!GO:0000313;organellar ribosome;1.3669755508579e-13!GO:0030163;protein catabolic process;1.86206794921086e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.98714214757053e-13!GO:0019941;modification-dependent protein catabolic process;2.78584850750903e-13!GO:0043632;modification-dependent macromolecule catabolic process;2.78584850750903e-13!GO:0044257;cellular protein catabolic process;3.27987075230668e-13!GO:0006511;ubiquitin-dependent protein catabolic process;6.04382523617823e-13!GO:0008219;cell death;8.20791716749074e-13!GO:0016265;death;8.20791716749074e-13!GO:0007049;cell cycle;9.07286386629729e-13!GO:0030964;NADH dehydrogenase complex (quinone);9.11583128858891e-13!GO:0045271;respiratory chain complex I;9.11583128858891e-13!GO:0005747;mitochondrial respiratory chain complex I;9.11583128858891e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.50990721018998e-12!GO:0042773;ATP synthesis coupled electron transport;1.50990721018998e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.95351416594724e-12!GO:0044248;cellular catabolic process;2.95351416594724e-12!GO:0051082;unfolded protein binding;3.65110912070573e-12!GO:0008135;translation factor activity, nucleic acid binding;5.78161058655015e-12!GO:0048193;Golgi vesicle transport;6.12665770712815e-12!GO:0043687;post-translational protein modification;1.10311287683552e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.38701780217748e-11!GO:0003712;transcription cofactor activity;2.663281430306e-11!GO:0005789;endoplasmic reticulum membrane;2.92043390139834e-11!GO:0048523;negative regulation of cellular process;4.7553104977359e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;6.14975250935146e-11!GO:0000375;RNA splicing, via transesterification reactions;6.14975250935146e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.14975250935146e-11!GO:0005793;ER-Golgi intermediate compartment;1.0271801864447e-10!GO:0006732;coenzyme metabolic process;1.37431587530078e-10!GO:0032559;adenyl ribonucleotide binding;1.43986122041506e-10!GO:0005524;ATP binding;1.48893392797976e-10!GO:0022402;cell cycle process;2.09022425483145e-10!GO:0009055;electron carrier activity;2.09942101879098e-10!GO:0030554;adenyl nucleotide binding;2.41415249606627e-10!GO:0009259;ribonucleotide metabolic process;2.70007183324201e-10!GO:0042254;ribosome biogenesis and assembly;3.09414969123604e-10!GO:0009150;purine ribonucleotide metabolic process;3.5490652105503e-10!GO:0006163;purine nucleotide metabolic process;4.49197560297693e-10!GO:0048519;negative regulation of biological process;8.67993482676098e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.03774986739789e-09!GO:0042623;ATPase activity, coupled;2.07947539351559e-09!GO:0008639;small protein conjugating enzyme activity;2.39159899566738e-09!GO:0003743;translation initiation factor activity;2.39882419214057e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.39966074446224e-09!GO:0016887;ATPase activity;2.45928001657168e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.57249240999383e-09!GO:0006164;purine nucleotide biosynthetic process;3.11737888440466e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.49761574581555e-09!GO:0004842;ubiquitin-protein ligase activity;4.19918814434796e-09!GO:0009141;nucleoside triphosphate metabolic process;4.33735981826755e-09!GO:0043067;regulation of programmed cell death;4.52697763344828e-09!GO:0042981;regulation of apoptosis;4.52697763344828e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.52777507716974e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.52777507716974e-09!GO:0009260;ribonucleotide biosynthetic process;5.26427390295429e-09!GO:0051726;regulation of cell cycle;5.55467582443769e-09!GO:0006413;translational initiation;6.66288693838226e-09!GO:0009142;nucleoside triphosphate biosynthetic process;7.23326756412902e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.23326756412902e-09!GO:0006461;protein complex assembly;8.88392416391897e-09!GO:0019787;small conjugating protein ligase activity;9.1195459769712e-09!GO:0000074;regulation of progression through cell cycle;1.11359426667106e-08!GO:0044431;Golgi apparatus part;1.19413696659932e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.30609482542772e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.30609482542772e-08!GO:0006446;regulation of translational initiation;1.82484754943355e-08!GO:0015986;ATP synthesis coupled proton transport;1.92582595233424e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.92582595233424e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.03301205307032e-08!GO:0006913;nucleocytoplasmic transport;3.60860753049465e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;3.88216574583232e-08!GO:0008565;protein transporter activity;4.37580196233926e-08!GO:0016023;cytoplasmic membrane-bound vesicle;4.67524605772159e-08!GO:0003676;nucleic acid binding;4.94768100179678e-08!GO:0006793;phosphorus metabolic process;4.94768100179678e-08!GO:0006796;phosphate metabolic process;4.94768100179678e-08!GO:0000278;mitotic cell cycle;5.17817495474478e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.89738015897984e-08!GO:0031988;membrane-bound vesicle;6.81759678920971e-08!GO:0051169;nuclear transport;7.26247332043176e-08!GO:0019829;cation-transporting ATPase activity;7.68013301809512e-08!GO:0009056;catabolic process;8.00223966939872e-08!GO:0046034;ATP metabolic process;8.1543462288571e-08!GO:0006366;transcription from RNA polymerase II promoter;9.48386111100794e-08!GO:0016604;nuclear body;9.60713157104328e-08!GO:0003924;GTPase activity;1.21557709557727e-07!GO:0051276;chromosome organization and biogenesis;1.21579329471926e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.21579329471926e-07!GO:0016881;acid-amino acid ligase activity;1.29719036790693e-07!GO:0006323;DNA packaging;1.39040370970065e-07!GO:0017038;protein import;1.53823233858343e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.67548859756861e-07!GO:0016070;RNA metabolic process;1.70241809918467e-07!GO:0005788;endoplasmic reticulum lumen;1.72707941288018e-07!GO:0043069;negative regulation of programmed cell death;1.79641478880128e-07!GO:0006754;ATP biosynthetic process;2.00612581373604e-07!GO:0006753;nucleoside phosphate metabolic process;2.00612581373604e-07!GO:0016310;phosphorylation;2.06401683573816e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.29519281102312e-07!GO:0044453;nuclear membrane part;2.44708517018629e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.61673838875491e-07!GO:0050794;regulation of cellular process;2.67413002882926e-07!GO:0005635;nuclear envelope;2.82363765161185e-07!GO:0006974;response to DNA damage stimulus;2.82363765161185e-07!GO:0043066;negative regulation of apoptosis;2.87428781210162e-07!GO:0009117;nucleotide metabolic process;3.18208703425232e-07!GO:0051246;regulation of protein metabolic process;3.18208703425232e-07!GO:0005773;vacuole;3.21939033379446e-07!GO:0005768;endosome;3.32556932406358e-07!GO:0051188;cofactor biosynthetic process;3.38639500830554e-07!GO:0009060;aerobic respiration;3.52969578439214e-07!GO:0006916;anti-apoptosis;5.07724302394479e-07!GO:0006888;ER to Golgi vesicle-mediated transport;5.28279769949893e-07!GO:0000139;Golgi membrane;5.42060787257068e-07!GO:0031252;leading edge;5.45882514417771e-07!GO:0015078;hydrogen ion transmembrane transporter activity;6.68039744986408e-07!GO:0006364;rRNA processing;7.50478659473116e-07!GO:0030120;vesicle coat;8.27073003943106e-07!GO:0030662;coated vesicle membrane;8.27073003943106e-07!GO:0006399;tRNA metabolic process;8.9367431733913e-07!GO:0045333;cellular respiration;9.02348396488555e-07!GO:0016072;rRNA metabolic process;1.05373299968819e-06!GO:0031982;vesicle;1.15161951785253e-06!GO:0031410;cytoplasmic vesicle;1.22276198742572e-06!GO:0031965;nuclear membrane;1.24457726732948e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.92285311734805e-06!GO:0045786;negative regulation of progression through cell cycle;1.93592446628211e-06!GO:0045259;proton-transporting ATP synthase complex;2.1221626477511e-06!GO:0048475;coated membrane;2.16209771926795e-06!GO:0030117;membrane coat;2.16209771926795e-06!GO:0016787;hydrolase activity;2.73325852115868e-06!GO:0065004;protein-DNA complex assembly;3.04024859192499e-06!GO:0016491;oxidoreductase activity;3.04024859192499e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.07858266101226e-06!GO:0005525;GTP binding;4.04567255385799e-06!GO:0048522;positive regulation of cellular process;4.1761262500471e-06!GO:0006333;chromatin assembly or disassembly;4.20969883907419e-06!GO:0000323;lytic vacuole;4.26023989763811e-06!GO:0005764;lysosome;4.26023989763811e-06!GO:0003713;transcription coactivator activity;4.48803094607225e-06!GO:0032446;protein modification by small protein conjugation;5.16264368565074e-06!GO:0005839;proteasome core complex (sensu Eukaryota);5.61435355596147e-06!GO:0005694;chromosome;6.33136855495967e-06!GO:0065002;intracellular protein transport across a membrane;6.91454442148316e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.27909260987229e-06!GO:0004812;aminoacyl-tRNA ligase activity;7.27909260987229e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.27909260987229e-06!GO:0016740;transferase activity;7.47768395451566e-06!GO:0004386;helicase activity;7.50926403735001e-06!GO:0007005;mitochondrion organization and biogenesis;7.96503991502385e-06!GO:0000785;chromatin;8.53990763746364e-06!GO:0016567;protein ubiquitination;8.53990763746364e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.59533245824416e-06!GO:0005770;late endosome;9.24684705585381e-06!GO:0006281;DNA repair;9.65823271635372e-06!GO:0008026;ATP-dependent helicase activity;1.02309137977209e-05!GO:0006099;tricarboxylic acid cycle;1.18313773915011e-05!GO:0046356;acetyl-CoA catabolic process;1.18313773915011e-05!GO:0009108;coenzyme biosynthetic process;1.19155149096808e-05!GO:0030029;actin filament-based process;1.19734005590695e-05!GO:0007264;small GTPase mediated signal transduction;1.21779332023601e-05!GO:0016607;nuclear speck;1.25904201247698e-05!GO:0044427;chromosomal part;1.33880189897881e-05!GO:0043038;amino acid activation;1.4746409347487e-05!GO:0006418;tRNA aminoacylation for protein translation;1.4746409347487e-05!GO:0043039;tRNA aminoacylation;1.4746409347487e-05!GO:0005762;mitochondrial large ribosomal subunit;1.59522997177999e-05!GO:0000315;organellar large ribosomal subunit;1.59522997177999e-05!GO:0016044;membrane organization and biogenesis;1.62806105208527e-05!GO:0006260;DNA replication;1.69605070597621e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.78847567625273e-05!GO:0015399;primary active transmembrane transporter activity;1.78847567625273e-05!GO:0009719;response to endogenous stimulus;1.80052354147374e-05!GO:0044440;endosomal part;1.802151038543e-05!GO:0010008;endosome membrane;1.802151038543e-05!GO:0005769;early endosome;1.88476917906447e-05!GO:0006752;group transfer coenzyme metabolic process;1.99700640470219e-05!GO:0003714;transcription corepressor activity;2.1270735951051e-05!GO:0016563;transcription activator activity;2.18109296671766e-05!GO:0005643;nuclear pore;2.18109296671766e-05!GO:0005667;transcription factor complex;2.68564550444934e-05!GO:0005905;coated pit;2.76072341493345e-05!GO:0051187;cofactor catabolic process;3.33202319250058e-05!GO:0006084;acetyl-CoA metabolic process;3.814214294967e-05!GO:0007243;protein kinase cascade;3.87644018788634e-05!GO:0045454;cell redox homeostasis;3.9456132567505e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.28339718510255e-05!GO:0016564;transcription repressor activity;4.54219470194822e-05!GO:0000245;spliceosome assembly;4.64914573944207e-05!GO:0019843;rRNA binding;4.67161562197487e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.81165711436404e-05!GO:0004298;threonine endopeptidase activity;4.9781236898047e-05!GO:0006091;generation of precursor metabolites and energy;5.05810172103902e-05!GO:0003697;single-stranded DNA binding;5.34791219162686e-05!GO:0032561;guanyl ribonucleotide binding;5.3824724085825e-05!GO:0019001;guanyl nucleotide binding;5.3824724085825e-05!GO:0046930;pore complex;6.37897673613703e-05!GO:0050789;regulation of biological process;6.41427065064313e-05!GO:0005798;Golgi-associated vesicle;6.51010518519201e-05!GO:0051301;cell division;7.13693400940769e-05!GO:0000151;ubiquitin ligase complex;7.22240064722878e-05!GO:0008047;enzyme activator activity;7.29672238424305e-05!GO:0016568;chromatin modification;7.37235460719102e-05!GO:0051170;nuclear import;7.66112059089424e-05!GO:0019899;enzyme binding;7.73754937661646e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.95344125681877e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.13495472461118e-05!GO:0006334;nucleosome assembly;8.6851893717473e-05!GO:0009109;coenzyme catabolic process;9.16955230138273e-05!GO:0031968;organelle outer membrane;9.81896044260546e-05!GO:0030867;rough endoplasmic reticulum membrane;0.000101859463634327!GO:0043566;structure-specific DNA binding;0.000107161950161958!GO:0006606;protein import into nucleus;0.000108133844503274!GO:0019867;outer membrane;0.00011694317079823!GO:0003724;RNA helicase activity;0.000135070633739633!GO:0043492;ATPase activity, coupled to movement of substances;0.000136187572016595!GO:0022403;cell cycle phase;0.000136774742908329!GO:0006613;cotranslational protein targeting to membrane;0.000142463420395723!GO:0008092;cytoskeletal protein binding;0.000145482972799329!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000162621362409512!GO:0000087;M phase of mitotic cell cycle;0.000162621362409512!GO:0009165;nucleotide biosynthetic process;0.000168830492223807!GO:0016853;isomerase activity;0.000168830492223807!GO:0031497;chromatin assembly;0.000170000703451194!GO:0007067;mitosis;0.000170364840198565!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000175256973521372!GO:0065009;regulation of a molecular function;0.000180217529344256!GO:0015630;microtubule cytoskeleton;0.000186905915393661!GO:0031324;negative regulation of cellular metabolic process;0.000190534249783183!GO:0016859;cis-trans isomerase activity;0.000213922145084655!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000214698741267842!GO:0005741;mitochondrial outer membrane;0.000221647334498515!GO:0005048;signal sequence binding;0.000230484365624666!GO:0001568;blood vessel development;0.000240442097232552!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000259336339879394!GO:0007010;cytoskeleton organization and biogenesis;0.000267948017023371!GO:0016779;nucleotidyltransferase activity;0.000270948898397818!GO:0043623;cellular protein complex assembly;0.000280371030676386!GO:0008632;apoptotic program;0.000334284743152315!GO:0009892;negative regulation of metabolic process;0.000425044271920891!GO:0005885;Arp2/3 protein complex;0.000445880646636342!GO:0048518;positive regulation of biological process;0.000452054493996296!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000468224580623215!GO:0006414;translational elongation;0.000477072955548183!GO:0001944;vasculature development;0.000482959081040583!GO:0007265;Ras protein signal transduction;0.000488078515035206!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.0004989413872145!GO:0044262;cellular carbohydrate metabolic process;0.000565227914767877!GO:0000314;organellar small ribosomal subunit;0.000567378802732779!GO:0005763;mitochondrial small ribosomal subunit;0.000567378802732779!GO:0051427;hormone receptor binding;0.000588252477848764!GO:0042802;identical protein binding;0.000611401630708412!GO:0051789;response to protein stimulus;0.00077563355773637!GO:0006986;response to unfolded protein;0.00077563355773637!GO:0008250;oligosaccharyl transferase complex;0.000779407093868651!GO:0048468;cell development;0.000795891258735154!GO:0050657;nucleic acid transport;0.000834193215860389!GO:0051236;establishment of RNA localization;0.000834193215860389!GO:0050658;RNA transport;0.000834193215860389!GO:0043021;ribonucleoprotein binding;0.000854802750763293!GO:0006403;RNA localization;0.000887331961950467!GO:0043681;protein import into mitochondrion;0.000893385062152733!GO:0008361;regulation of cell size;0.000937187487236155!GO:0015980;energy derivation by oxidation of organic compounds;0.00094362212964323!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000955799129228445!GO:0051329;interphase of mitotic cell cycle;0.000965741500032966!GO:0005096;GTPase activator activity;0.000965741500032966!GO:0048471;perinuclear region of cytoplasm;0.000971077154622001!GO:0006612;protein targeting to membrane;0.00098465086295103!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00102000247020846!GO:0008186;RNA-dependent ATPase activity;0.00105017087384007!GO:0003899;DNA-directed RNA polymerase activity;0.00110503267884148!GO:0016049;cell growth;0.00115188941184126!GO:0035257;nuclear hormone receptor binding;0.00115772858456198!GO:0007006;mitochondrial membrane organization and biogenesis;0.00116270788535741!GO:0051920;peroxiredoxin activity;0.0011848293853924!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00120230196954144!GO:0051087;chaperone binding;0.00120284942337084!GO:0007242;intracellular signaling cascade;0.00124365718238015!GO:0001558;regulation of cell growth;0.00129196211261195!GO:0030133;transport vesicle;0.00138897321867807!GO:0005813;centrosome;0.00139088009038916!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00144560677446697!GO:0008654;phospholipid biosynthetic process;0.00147291768856911!GO:0004576;oligosaccharyl transferase activity;0.00147291768856911!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157119540834921!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157119540834921!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157119540834921!GO:0051325;interphase;0.00163179798509414!GO:0030176;integral to endoplasmic reticulum membrane;0.00172765909403718!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00172765909403718!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00188210295730821!GO:0018196;peptidyl-asparagine modification;0.00188735917422063!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00188735917422063!GO:0006897;endocytosis;0.00193829565651017!GO:0010324;membrane invagination;0.00193829565651017!GO:0007162;negative regulation of cell adhesion;0.00200749052414828!GO:0030041;actin filament polymerization;0.00203344255942061!GO:0031072;heat shock protein binding;0.00203719524226368!GO:0005774;vacuolar membrane;0.00217380926684326!GO:0051270;regulation of cell motility;0.00217380926684326!GO:0030659;cytoplasmic vesicle membrane;0.00230134535649716!GO:0006626;protein targeting to mitochondrion;0.00243189519880752!GO:0015992;proton transport;0.00259782648222605!GO:0043284;biopolymer biosynthetic process;0.00265321879921073!GO:0006818;hydrogen transport;0.00266012903176765!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00270663359396357!GO:0004004;ATP-dependent RNA helicase activity;0.0027157952376982!GO:0040011;locomotion;0.00273068633131846!GO:0030027;lamellipodium;0.00275908562919697!GO:0051101;regulation of DNA binding;0.00286856110988668!GO:0006509;membrane protein ectodomain proteolysis;0.00295301349608644!GO:0033619;membrane protein proteolysis;0.00295301349608644!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00307273783769137!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00307273783769137!GO:0030658;transport vesicle membrane;0.00340802791185909!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00379663302900078!GO:0005815;microtubule organizing center;0.00386844127104643!GO:0040012;regulation of locomotion;0.0039337178104325!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00399673656602699!GO:0017166;vinculin binding;0.00402614799729724!GO:0033673;negative regulation of kinase activity;0.00412978102533973!GO:0006469;negative regulation of protein kinase activity;0.00412978102533973!GO:0009967;positive regulation of signal transduction;0.00419518502174029!GO:0030132;clathrin coat of coated pit;0.00422332097013273!GO:0048487;beta-tubulin binding;0.00429433648192492!GO:0030833;regulation of actin filament polymerization;0.00431048765653598!GO:0005083;small GTPase regulator activity;0.0044658298393491!GO:0009966;regulation of signal transduction;0.00448968593375645!GO:0051348;negative regulation of transferase activity;0.00455559241060168!GO:0022408;negative regulation of cell-cell adhesion;0.00456824193272097!GO:0045941;positive regulation of transcription;0.00460787793989751!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00485264397663273!GO:0008139;nuclear localization sequence binding;0.00503836631453267!GO:0044437;vacuolar part;0.00518106880538314!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00537015897047977!GO:0048514;blood vessel morphogenesis;0.0057406764626397!GO:0065007;biological regulation;0.00588827586764096!GO:0007040;lysosome organization and biogenesis;0.00590912330529512!GO:0008154;actin polymerization and/or depolymerization;0.00595664071313671!GO:0030660;Golgi-associated vesicle membrane;0.00595664071313671!GO:0030663;COPI coated vesicle membrane;0.00596030161472798!GO:0030126;COPI vesicle coat;0.00596030161472798!GO:0016481;negative regulation of transcription;0.00606506693454351!GO:0040008;regulation of growth;0.00618021135726068!GO:0001953;negative regulation of cell-matrix adhesion;0.00647635177401952!GO:0051098;regulation of binding;0.00647635177401952!GO:0022890;inorganic cation transmembrane transporter activity;0.00680229562446977!GO:0003729;mRNA binding;0.00680229562446977!GO:0030118;clathrin coat;0.00720375892461493!GO:0005765;lysosomal membrane;0.0072710605743897!GO:0051252;regulation of RNA metabolic process;0.00731250134941229!GO:0043488;regulation of mRNA stability;0.00731250134941229!GO:0043487;regulation of RNA stability;0.00731250134941229!GO:0030134;ER to Golgi transport vesicle;0.00775689620138743!GO:0031902;late endosome membrane;0.0078372502919856!GO:0030880;RNA polymerase complex;0.00798870746557358!GO:0005791;rough endoplasmic reticulum;0.00815772517347822!GO:0051028;mRNA transport;0.00815772517347822!GO:0030137;COPI-coated vesicle;0.00828883354837804!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00834815728394198!GO:0044433;cytoplasmic vesicle part;0.00839155168820324!GO:0007266;Rho protein signal transduction;0.00839155168820324!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00870177727870563!GO:0015002;heme-copper terminal oxidase activity;0.00870177727870563!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00870177727870563!GO:0004129;cytochrome-c oxidase activity;0.00870177727870563!GO:0045893;positive regulation of transcription, DNA-dependent;0.00875189038649406!GO:0005684;U2-dependent spliceosome;0.00893761148018626!GO:0000279;M phase;0.0091748009241158!GO:0030334;regulation of cell migration;0.00923585062937684!GO:0006950;response to stress;0.00940130118665168!GO:0016363;nuclear matrix;0.0095806487776004!GO:0030127;COPII vesicle coat;0.00967270233926924!GO:0012507;ER to Golgi transport vesicle membrane;0.00967270233926924!GO:0043065;positive regulation of apoptosis;0.00969406758669833!GO:0048660;regulation of smooth muscle cell proliferation;0.010041584198714!GO:0048500;signal recognition particle;0.0104768017808341!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0105822770191176!GO:0030695;GTPase regulator activity;0.0106023820276528!GO:0051168;nuclear export;0.0109949077663074!GO:0006595;polyamine metabolic process;0.0110569902439656!GO:0050790;regulation of catalytic activity;0.011190739402007!GO:0043068;positive regulation of programmed cell death;0.0112231042521707!GO:0043086;negative regulation of catalytic activity;0.011310626301408!GO:0006740;NADPH regeneration;0.0116017450686552!GO:0006098;pentose-phosphate shunt;0.0116017450686552!GO:0008637;apoptotic mitochondrial changes;0.0120394424540631!GO:0003779;actin binding;0.0120824009497355!GO:0006402;mRNA catabolic process;0.0120824009497355!GO:0001726;ruffle;0.0121531884409664!GO:0001525;angiogenesis;0.0121719693039703!GO:0031301;integral to organelle membrane;0.0127161151451018!GO:0030308;negative regulation of cell growth;0.0127894078392274!GO:0000786;nucleosome;0.0129846457595424!GO:0045792;negative regulation of cell size;0.0130702630251512!GO:0051128;regulation of cellular component organization and biogenesis;0.0133550996382378!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0135676528114558!GO:0045185;maintenance of protein localization;0.0136607666469994!GO:0005092;GDP-dissociation inhibitor activity;0.0136607666469994!GO:0007033;vacuole organization and biogenesis;0.0137599285814649!GO:0005862;muscle thin filament tropomyosin;0.0137612068337388!GO:0000209;protein polyubiquitination;0.0139135187993397!GO:0045045;secretory pathway;0.0139654793463961!GO:0015036;disulfide oxidoreductase activity;0.0139654793463961!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0142729362705972!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0142839872627795!GO:0022407;regulation of cell-cell adhesion;0.0146429816887701!GO:0005637;nuclear inner membrane;0.0147786124928601!GO:0007050;cell cycle arrest;0.0147939670952423!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0149650624598113!GO:0006352;transcription initiation;0.0154353689371364!GO:0046474;glycerophospholipid biosynthetic process;0.0154549929502934!GO:0046822;regulation of nucleocytoplasmic transport;0.0156233505549609!GO:0005099;Ras GTPase activator activity;0.0158284437591758!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0161243995298407!GO:0000428;DNA-directed RNA polymerase complex;0.0161243995298407!GO:0006383;transcription from RNA polymerase III promoter;0.0163958959483109!GO:0042168;heme metabolic process;0.0164345348890661!GO:0006401;RNA catabolic process;0.0164510975423062!GO:0030521;androgen receptor signaling pathway;0.0167598681772371!GO:0044452;nucleolar part;0.0168733238428075!GO:0031272;regulation of pseudopodium formation;0.0175821318779283!GO:0031269;pseudopodium formation;0.0175821318779283!GO:0031344;regulation of cell projection organization and biogenesis;0.0175821318779283!GO:0031268;pseudopodium organization and biogenesis;0.0175821318779283!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0175821318779283!GO:0031274;positive regulation of pseudopodium formation;0.0175821318779283!GO:0006891;intra-Golgi vesicle-mediated transport;0.0176323566097002!GO:0008033;tRNA processing;0.0177231291024412!GO:0005819;spindle;0.0177283404897364!GO:0006118;electron transport;0.0177654243708932!GO:0015631;tubulin binding;0.0178394235799298!GO:0000059;protein import into nucleus, docking;0.017983999374149!GO:0032507;maintenance of cellular protein localization;0.0180845963511752!GO:0043022;ribosome binding;0.0186056734044975!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0189913199732047!GO:0006839;mitochondrial transport;0.0192449752562238!GO:0031418;L-ascorbic acid binding;0.0192692095787896!GO:0006289;nucleotide-excision repair;0.0193552513290309!GO:0016197;endosome transport;0.0195802314926482!GO:0006778;porphyrin metabolic process;0.0195802314926482!GO:0033013;tetrapyrrole metabolic process;0.0195802314926482!GO:0012506;vesicle membrane;0.0195802314926482!GO:0006650;glycerophospholipid metabolic process;0.0203047959308366!GO:0045926;negative regulation of growth;0.0212320555647744!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.021349853776573!GO:0007034;vacuolar transport;0.0213530081169724!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0218557075203711!GO:0005832;chaperonin-containing T-complex;0.0218854392328382!GO:0031901;early endosome membrane;0.0219438827821389!GO:0005869;dynactin complex;0.0219438827821389!GO:0051540;metal cluster binding;0.0222548695588646!GO:0051536;iron-sulfur cluster binding;0.0222548695588646!GO:0030155;regulation of cell adhesion;0.0226263354071082!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0227303477947663!GO:0033043;regulation of organelle organization and biogenesis;0.0227303477947663!GO:0001952;regulation of cell-matrix adhesion;0.0227380529754169!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0229054158421813!GO:0045047;protein targeting to ER;0.0229054158421813!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0241565003025142!GO:0030119;AP-type membrane coat adaptor complex;0.0241923264497682!GO:0045879;negative regulation of smoothened signaling pathway;0.0250792155262431!GO:0006458;'de novo' protein folding;0.0254361426653353!GO:0051084;'de novo' posttranslational protein folding;0.0254361426653353!GO:0030032;lamellipodium biogenesis;0.0255944833699799!GO:0048659;smooth muscle cell proliferation;0.0258400941229938!GO:0008283;cell proliferation;0.0258400941229938!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0258400941229938!GO:0030125;clathrin vesicle coat;0.0262523541210248!GO:0030665;clathrin coated vesicle membrane;0.0262523541210248!GO:0035258;steroid hormone receptor binding;0.026621572851622!GO:0030145;manganese ion binding;0.0267585629133636!GO:0043433;negative regulation of transcription factor activity;0.0268540240823833!GO:0000082;G1/S transition of mitotic cell cycle;0.0274837051930577!GO:0019904;protein domain specific binding;0.0275387585407312!GO:0003756;protein disulfide isomerase activity;0.027564310753922!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.027564310753922!GO:0030031;cell projection biogenesis;0.0275962223307144!GO:0051235;maintenance of localization;0.0276610510743768!GO:0046519;sphingoid metabolic process;0.027837249672813!GO:0016272;prefoldin complex;0.0278656126976407!GO:0000123;histone acetyltransferase complex;0.0282880033142205!GO:0008312;7S RNA binding;0.0283354846377987!GO:0008180;signalosome;0.0285502322938293!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0286072425819338!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0286744125958467!GO:0005100;Rho GTPase activator activity;0.0286744125958467!GO:0003746;translation elongation factor activity;0.029336265522917!GO:0046467;membrane lipid biosynthetic process;0.029528514723702!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0300444203608523!GO:0031529;ruffle organization and biogenesis;0.0302755228457467!GO:0046489;phosphoinositide biosynthetic process;0.0302755228457467!GO:0001666;response to hypoxia;0.0303198604447286!GO:0006917;induction of apoptosis;0.0307351768356792!GO:0000049;tRNA binding;0.0310660194184193!GO:0051651;maintenance of cellular localization;0.031690501296054!GO:0008538;proteasome activator activity;0.0318363415545546!GO:0035035;histone acetyltransferase binding;0.0326215196583329!GO:0009303;rRNA transcription;0.0330994843155338!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0332703354372253!GO:0048144;fibroblast proliferation;0.0335144006414836!GO:0048145;regulation of fibroblast proliferation;0.0335144006414836!GO:0030131;clathrin adaptor complex;0.0335144006414836!GO:0016301;kinase activity;0.0347325571751803!GO:0043189;H4/H2A histone acetyltransferase complex;0.0351603021666392!GO:0004674;protein serine/threonine kinase activity;0.0353647290285113!GO:0050178;phenylpyruvate tautomerase activity;0.0355227288548556!GO:0003684;damaged DNA binding;0.0358964244939707!GO:0030984;kininogen binding;0.0365648264074684!GO:0004213;cathepsin B activity;0.0365648264074684!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0365811718574847!GO:0010257;NADH dehydrogenase complex assembly;0.0365811718574847!GO:0033108;mitochondrial respiratory chain complex assembly;0.0365811718574847!GO:0001569;patterning of blood vessels;0.037497777614322!GO:0051539;4 iron, 4 sulfur cluster binding;0.0379973828164444!GO:0006979;response to oxidative stress;0.0381573735325809!GO:0012502;induction of programmed cell death;0.0384156415383054!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.038573892170494!GO:0003711;transcription elongation regulator activity;0.0388604371803368!GO:0006417;regulation of translation;0.0397174503345415!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0398170749525133!GO:0022415;viral reproductive process;0.0399007507887296!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0402212311353805!GO:0004680;casein kinase activity;0.0404776282812989!GO:0030518;steroid hormone receptor signaling pathway;0.0409690528098626!GO:0003690;double-stranded DNA binding;0.0409690528098626!GO:0050811;GABA receptor binding;0.0411147726082705!GO:0006643;membrane lipid metabolic process;0.0414670905391059!GO:0031625;ubiquitin protein ligase binding;0.0418659148993764!GO:0006007;glucose catabolic process;0.0427607094265828!GO:0006378;mRNA polyadenylation;0.0435138871046225!GO:0006783;heme biosynthetic process;0.0441537992176844!GO:0030913;paranodal junction assembly;0.044204201345401!GO:0032288;myelin formation;0.044204201345401!GO:0043407;negative regulation of MAP kinase activity;0.045001680195961!GO:0003682;chromatin binding;0.0459255225751732!GO:0035267;NuA4 histone acetyltransferase complex;0.0464166364347942!GO:0006892;post-Golgi vesicle-mediated transport;0.0465970792588655!GO:0030911;TPR domain binding;0.0471524506252962!GO:0006497;protein amino acid lipidation;0.0475009445440417!GO:0030149;sphingolipid catabolic process;0.0476828110421087!GO:0003678;DNA helicase activity;0.0478963856943067!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0480938020411746!GO:0006611;protein export from nucleus;0.0482450132733388!GO:0004177;aminopeptidase activity;0.0489513312639017!GO:0018193;peptidyl-amino acid modification;0.0489513312639017!GO:0006672;ceramide metabolic process;0.0489707261107056
|sample_id=11343
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=internal thoracic artery
|top_motifs=SPZ1:1.83185403667;RXR{A,B,G}:1.81564153297;IKZF1:1.64688144271;SOX{8,9,10}:1.58441371893;TFAP4:1.51535448602;FOXL1:1.42237627014;ARID5B:1.40518186448;TLX1..3_NFIC{dimer}:1.37144835975;UFEwm:1.19858388989;ZNF423:1.19253675071;HES1:1.18376479012;AR:1.14322733383;NFATC1..3:1.12936899532;RXRA_VDR{dimer}:1.11126465097;GLI1..3:1.08685095636;ZBTB6:1.02120595097;PPARG:0.96682935519;TFAP2{A,C}:0.948453836777;NKX2-2,8:0.944437218111;EBF1:0.942376509463;ESRRA:0.917951423668;ZNF148:0.873651021635;TP53:0.767982184686;NR3C1:0.755637363817;GTF2A1,2:0.753638068083;SMAD1..7,9:0.734649189112;ONECUT1,2:0.680706722336;GATA6:0.671453803653;LEF1_TCF7_TCF7L1,2:0.6522577315;XCPE1{core}:0.651241885481;HAND1,2:0.584552784558;PAX1,9:0.572454030468;PAX5:0.545457164543;NFE2L1:0.541533236052;ALX4:0.511016571637;ZIC1..3:0.503482417582;SOX17:0.484492961599;ETS1,2:0.482515729609;IKZF2:0.455185645578;GZF1:0.430081775376;HMX1:0.403177222554;EVI1:0.367895299796;SOX2:0.362622293589;REST:0.360327637749;SOX5:0.351970566511;EN1,2:0.347838845609;bHLH_family:0.341739324472;TFCP2:0.338408685865;HOX{A5,B5}:0.294830491472;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.287127090999;SPIB:0.274726722029;GCM1,2:0.260334635088;HIC1:0.256851007609;HMGA1,2:0.255861166318;HBP1_HMGB_SSRP1_UBTF:0.210333064353;XBP1:0.176479288581;POU6F1:0.173425560153;SRF:0.166226830175;NANOG:0.159858261461;LHX3,4:0.139072372706;TEAD1:0.136920489963;TBP:0.12438502352;BACH2:0.10938513139;SP1:0.0922371281724;PITX1..3:0.0845702424581;ELF1,2,4:0.0818982281709;FOX{I1,J2}:0.0781678504274;MTE{core}:0.0723329725538;RORA:0.0619478217454;LMO2:0.0530848674783;FOS_FOS{B,L1}_JUN{B,D}:0.0494776304226;YY1:0.0441244734558;ZFP161:0.0337960567346;ZNF238:0.0327862218404;NFE2:0.0158029473725;TBX4,5:-0.00211286350427;NANOG{mouse}:-0.00927898692;STAT2,4,6:-0.0308536020657;TFAP2B:-0.0346147408456;GTF2I:-0.0377170873742;PAX8:-0.0393564452885;NR5A1,2:-0.0517685845306;KLF4:-0.052620907981;GFI1B:-0.0527560975711;NFE2L2:-0.0659147445781;PATZ1:-0.0795398197457;SPI1:-0.0850638264698;HNF4A_NR2F1,2:-0.0880797842359;NKX3-2:-0.0941082511374;MYOD1:-0.110697563062;FOXQ1:-0.111240597478;MED-1{core}:-0.114483809624;EGR1..3:-0.127128391578;NFKB1_REL_RELA:-0.140878211904;POU3F1..4:-0.147176671288;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.151506209389;FOSL2:-0.151993948706;MYB:-0.155841725314;NHLH1,2:-0.170651017525;FOXM1:-0.194183866132;MAZ:-0.212662780072;POU2F1..3:-0.218547700348;RREB1:-0.237213000223;HNF1A:-0.24746011026;NKX2-1,4:-0.255875679189;PAX6:-0.272397612517;ATF2:-0.278711174299;TEF:-0.302752890301;ATF6:-0.303630945144;ZNF143:-0.306840083104;RBPJ:-0.308539821436;SNAI1..3:-0.345686162398;PAX4:-0.347853310273;ESR1:-0.367059162685;ADNP_IRX_SIX_ZHX:-0.37616235751;RFX1:-0.379688543145;FOXD3:-0.388141035;MTF1:-0.404564101421;TAL1_TCF{3,4,12}:-0.415134069812;PRDM1:-0.420335031584;BPTF:-0.436454581808;FOXA2:-0.440044694731;PAX3,7:-0.448182987615;PRRX1,2:-0.448775246107;NR6A1:-0.474012129753;MEF2{A,B,C,D}:-0.50848241468;RUNX1..3:-0.513425895778;DMAP1_NCOR{1,2}_SMARC:-0.515863365081;TLX2:-0.518434081051;DBP:-0.5206771189;JUN:-0.530543818388;HLF:-0.534485301029;E2F1..5:-0.53933488676;CDC5L:-0.556984401536;GATA4:-0.566372182566;VSX1,2:-0.576717159116;TFDP1:-0.583900232795;MZF1:-0.585229036711;IRF1,2:-0.589735431412;FOX{D1,D2}:-0.591293785575;CRX:-0.60371073197;ZEB1:-0.639233146211;IRF7:-0.641696840571;PBX1:-0.664597044101;CUX2:-0.667958220304;ZBTB16:-0.675946368937;FOXO1,3,4:-0.67710827377;ALX1:-0.681633950931;OCT4_SOX2{dimer}:-0.709117931944;MYFfamily:-0.709202810652;NKX2-3_NKX2-5:-0.723682475153;HOX{A6,A7,B6,B7}:-0.725095641876;FOXP1:-0.732548964479;HSF1,2:-0.745265272865;NRF1:-0.760062696221;FOXP3:-0.763264517579;STAT1,3:-0.778205459817;PAX2:-0.778464208801;MAFB:-0.792064327333;FOX{F1,F2,J1}:-0.812443910151;CDX1,2,4:-0.822302204392;CEBPA,B_DDIT3:-0.857658488058;TOPORS:-0.867469895785;EP300:-0.870949391896;NFY{A,B,C}:-0.876213668887;CREB1:-0.906905002467;GFI1:-0.922135069303;SREBF1,2:-0.930311406905;ELK1,4_GABP{A,B1}:-0.939318473997;STAT5{A,B}:-0.943733007525;MYBL2:-0.949262653913;PDX1:-0.997478361988;HOXA9_MEIS1:-1.02114097386;AIRE:-1.05480661865;NFIL3:-1.07932667128;HOX{A4,D4}:-1.08973300293;HIF1A:-1.09893347925;NR1H4:-1.12961111772;TGIF1:-1.17888276971;BREu{core}:-1.23305128685;ATF5_CREB3:-1.28955804711;RFX2..5_RFXANK_RFXAP:-1.29596239425;ZNF384:-1.32754560651;POU1F1:-1.35860038765;T:-1.39694010938;ATF4:-1.40038146474;NKX3-1:-1.43426894776;NFIX:-1.49175784789;AHR_ARNT_ARNT2:-1.49337781449;POU5F1:-1.52303958437;NKX6-1,2:-1.5487391031;FOXN1:-1.78192902958
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11343-117G2;search_select_hide=table117:FF:11343-117G2
}}
}}

Latest revision as of 17:53, 4 June 2020

Name:Endothelial Cells - Thoracic, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11978
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueinternal thoracic artery
dev stage50 years old adult
sexmale
age50
cell typeblood vessel endothelial cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1555
catalog numberCA308-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004966
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11978 CAGE DRX008230 DRR009102
Accession ID Hg19

Library idBAMCTSS
CNhs11978 DRZ000527 DRZ001912
Accession ID Hg38

Library idBAMCTSS
CNhs11978 DRZ011877 DRZ013262
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004966
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10006.AGTCAA sRNA-Seq DRX037078 DRR041444
Accession ID Hg19

Library idBAMCTSS
SRhi10006.AGTCAA DRZ007086


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0776
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.216
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.295
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.919
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00434
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.267
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.241
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.172
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.25
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.126
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.0907
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.703
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.363
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic1.236
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.71
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11978

Jaspar motifP-value
MA0002.20.81
MA0003.10.281
MA0004.10.82
MA0006.10.1
MA0007.10.13
MA0009.10.886
MA0014.10.53
MA0017.10.103
MA0018.26.56659e-5
MA0019.10.0932
MA0024.10.00101
MA0025.10.729
MA0027.10.512
MA0028.10.036
MA0029.10.0765
MA0030.10.141
MA0031.10.148
MA0035.20.0344
MA0038.10.00869
MA0039.20.802
MA0040.10.15
MA0041.10.339
MA0042.10.852
MA0043.13.65745e-6
MA0046.10.695
MA0047.20.168
MA0048.10.488
MA0050.10.00284
MA0051.10.0633
MA0052.10.0184
MA0055.10.405
MA0057.10.178
MA0058.10.693
MA0059.10.285
MA0060.16.34178e-4
MA0061.10.497
MA0062.20.00103
MA0065.20.0317
MA0066.10.255
MA0067.10.0137
MA0068.10.394
MA0069.10.472
MA0070.10.772
MA0071.10.128
MA0072.10.456
MA0073.10.527
MA0074.10.145
MA0076.16.88134e-4
MA0077.12.52042e-6
MA0078.10.0182
MA0079.20.589
MA0080.20.82
MA0081.10.62
MA0083.10.347
MA0084.10.212
MA0087.10.122
MA0088.10.328
MA0090.10.37
MA0091.10.134
MA0092.10.662
MA0093.10.708
MA0099.20.0186
MA0100.10.249
MA0101.10.966
MA0102.23.16776e-5
MA0103.10.574
MA0104.20.302
MA0105.10.122
MA0106.10.00697
MA0107.10.756
MA0108.20.626
MA0111.10.882
MA0112.20.0149
MA0113.10.478
MA0114.10.764
MA0115.10.415
MA0116.10.0267
MA0117.10.214
MA0119.10.0717
MA0122.10.645
MA0124.10.792
MA0125.10.351
MA0131.10.139
MA0135.10.994
MA0136.10.26
MA0137.20.0441
MA0138.20.475
MA0139.10.213
MA0140.10.449
MA0141.10.00692
MA0142.10.568
MA0143.10.476
MA0144.10.881
MA0145.10.121
MA0146.10.179
MA0147.10.741
MA0148.10.0187
MA0149.10.0704
MA0150.10.938
MA0152.10.999
MA0153.10.36
MA0154.10.0761
MA0155.10.0381
MA0156.10.52
MA0157.10.509
MA0159.10.031
MA0160.10.536
MA0162.10.0888
MA0163.10.0577
MA0164.10.3
MA0258.10.0375
MA0259.10.404



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11978

Novel motifP-value
10.356
100.95
1000.817
1010.342
1020.502
1030.132
1040.945
1050.305
1060.00961
1070.0298
1080.143
1090.167
110.0522
1100.0556
1110.0654
1120.161
1130.888
1140.117
1150.232
1160.14
1170.567
1180.214
1190.273
120.849
1200.00324
1210.882
1220.264
1230.602
1240.542
1250.291
1260.875
1270.263
1280.233
1290.0789
130.421
1300.617
1310.914
1320.379
1330.59
1340.511
1350.135
1360.749
1370.192
1380.671
1390.0713
140.827
1400.967
1410.39
1420.837
1430.012
1440.822
1450.0814
1460.289
1470.0656
1480.593
1490.0211
150.5
1500.254
1510.303
1520.0325
1530.0517
1540.676
1550.8
1560.158
1570.956
1580.324
1590.965
160.312
1600.00518
1610.634
1620.723
1630.714
1640.159
1650.873
1660.563
1670.648
1680.429
1690.0245
170.103
180.166
190.0606
20.255
200.977
210.751
220.243
230.109
240.738
250.858
260.376
270.201
280.266
290.476
30.517
300.896
310.681
320.0404
330.556
340.254
350.624
360.309
370.0887
380.311
390.213
40.734
400.0702
410.0895
420.884
430.314
440.145
450.3
460.0725
470.188
480.0856
490.433
50.791
500.65
510.311
520.597
530.687
540.49
550.759
560.622
570.233
580.914
590.0079
60.878
600.26
610.8
620.436
630.226
640.362
650.0755
660.983
670.349
680.218
690.133
70.693
700.106
710.368
720.697
730.0163
740.97
750.335
760.896
770.0189
780.544
791.87768e-4
80.029
800.595
810.73
820.185
830.469
840.135
850.085
860.851
870.242
880.891
890.0168
90.262
900.963
910.245
920.198
930.593
940.844
950.145
960.584
970.477
980.625
990.0171



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11978


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
1000413 (endothelial cell of artery)
0002544 (aortic endothelial cell)
0002545 (thoracic aorta endothelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000947 (aorta)
0001637 (artery)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0009569 (subdivision of trunk)
0004573 (systemic artery)
0000487 (simple squamous epithelium)
0005800 (segment of aorta)
0003509 (arterial blood vessel)
0004638 (blood vessel endothelium)
0003915 (endothelial tube)
0004700 (arterial system endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001515 (thoracic aorta)
0001917 (endothelium of artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0000915 (thoracic segment of trunk)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000047 (human endothelial cell of the artery sample)
0000048 (human endothelial cell of the aorta sample)
0000001 (sample)
0000051 (human thoracic endothelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)

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