FF:11342-117G1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005962 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008227;DRR009099;DRZ000524;DRZ001909;DRZ011874;DRZ013259 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0000487,UBERON:0004638,UBERON:0007500,UBERON:0001981,UBERON:0010523,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001915,UBERON:0004535,UBERON:0001982,UBERON:0004537,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:0002144 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000001,FF:0000050 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor2.CNhs11376.11342-117G1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor2.CNhs11376.11342-117G1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor2.CNhs11376.11342-117G1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor2.CNhs11376.11342-117G1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Microvascular%252c%2520donor2.CNhs11376.11342-117G1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11342-117G1 | |id=FF:11342-117G1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000050 | ||
|is_obsolete= | |||
|library_id=CNhs11376 | |||
|library_id_phase_based=2:CNhs11376 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11342 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11342 | |||
|name=Endothelial Cells - Microvascular, donor2 | |name=Endothelial Cells - Microvascular, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11376,LSID771,release012,COMPLETED | |profile_hcage=CNhs11376,LSID771,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10005,,, | |profile_srnaseq=SRhi10005,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=CA100-R10a | |rna_catalog_number=CA100-R10a | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age=47 | |sample_age=47 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.21064412318424e-218!GO:0005737;cytoplasm;1.25170506868806e-202!GO:0043226;organelle;9.35242308754799e-166!GO:0043229;intracellular organelle;2.10981783631765e-165!GO:0043231;intracellular membrane-bound organelle;3.0521871248041e-160!GO:0043227;membrane-bound organelle;5.32679281945177e-160!GO:0044444;cytoplasmic part;6.1359493389809e-150!GO:0044422;organelle part;1.08566787899288e-131!GO:0044446;intracellular organelle part;2.57813922000703e-130!GO:0032991;macromolecular complex;2.27353580127212e-96!GO:0030529;ribonucleoprotein complex;3.44155513966912e-85!GO:0005739;mitochondrion;3.25258922227989e-78!GO:0005515;protein binding;1.1103504614204e-76!GO:0044237;cellular metabolic process;8.89461497951153e-74!GO:0044238;primary metabolic process;5.23943039624202e-73!GO:0043233;organelle lumen;4.7600330710068e-69!GO:0031974;membrane-enclosed lumen;4.7600330710068e-69!GO:0043170;macromolecule metabolic process;2.22608377230556e-63!GO:0003723;RNA binding;1.05038937649321e-60!GO:0044428;nuclear part;7.6497163602677e-59!GO:0005840;ribosome;3.10261289846894e-57!GO:0031090;organelle membrane;1.97715140594735e-53!GO:0019538;protein metabolic process;6.82339905118919e-53!GO:0044429;mitochondrial part;2.23550058272466e-52!GO:0003735;structural constituent of ribosome;1.0516709927599e-50!GO:0006412;translation;1.48154659224986e-50!GO:0043234;protein complex;5.06574033137322e-48!GO:0005634;nucleus;1.06796292301952e-47!GO:0044260;cellular macromolecule metabolic process;1.10645644073349e-46!GO:0044267;cellular protein metabolic process;1.38905613508839e-46!GO:0031967;organelle envelope;2.25014780989948e-45!GO:0031975;envelope;5.50798786005381e-45!GO:0005829;cytosol;1.97141348257281e-44!GO:0033279;ribosomal subunit;1.8153037795924e-42!GO:0016043;cellular component organization and biogenesis;3.98043390754222e-42!GO:0009058;biosynthetic process;1.40307522181818e-40!GO:0015031;protein transport;2.05797668875067e-40!GO:0006396;RNA processing;4.08073599293639e-40!GO:0044249;cellular biosynthetic process;2.59901353812155e-39!GO:0033036;macromolecule localization;4.94295485833307e-39!GO:0009059;macromolecule biosynthetic process;1.40463877206895e-38!GO:0031981;nuclear lumen;2.74749043491278e-38!GO:0045184;establishment of protein localization;3.72216729263745e-37!GO:0008104;protein localization;1.79501322979083e-36!GO:0005740;mitochondrial envelope;3.20059560672888e-36!GO:0031966;mitochondrial membrane;3.06631819776138e-34!GO:0046907;intracellular transport;4.66132188295735e-32!GO:0019866;organelle inner membrane;2.16622806035358e-31!GO:0043228;non-membrane-bound organelle;8.14144278006759e-31!GO:0043232;intracellular non-membrane-bound organelle;8.14144278006759e-31!GO:0065003;macromolecular complex assembly;2.89158167017026e-30!GO:0005743;mitochondrial inner membrane;3.32469618054966e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.08961082610372e-30!GO:0043283;biopolymer metabolic process;1.38139355853628e-29!GO:0016071;mRNA metabolic process;4.63505988947157e-29!GO:0008380;RNA splicing;7.18264004099109e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.18264004099109e-28!GO:0006886;intracellular protein transport;7.54253320176526e-28!GO:0006996;organelle organization and biogenesis;9.61434553052521e-28!GO:0022607;cellular component assembly;6.0434286005617e-27!GO:0006397;mRNA processing;1.37720994738955e-25!GO:0010467;gene expression;2.3670462797466e-25!GO:0044445;cytosolic part;7.70294154223035e-25!GO:0006119;oxidative phosphorylation;1.85193064189223e-23!GO:0015934;large ribosomal subunit;8.88186304827462e-23!GO:0044455;mitochondrial membrane part;9.93651476661711e-23!GO:0005654;nucleoplasm;3.44404236699581e-22!GO:0051649;establishment of cellular localization;3.89436654246964e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.14676885630721e-22!GO:0051641;cellular localization;6.31885121654517e-22!GO:0000166;nucleotide binding;1.98583886025464e-21!GO:0031980;mitochondrial lumen;7.635706316963e-21!GO:0005759;mitochondrial matrix;7.635706316963e-21!GO:0015935;small ribosomal subunit;1.04942662026378e-20!GO:0005681;spliceosome;2.00425095889126e-20!GO:0016462;pyrophosphatase activity;3.48007179554895e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.85625926430783e-19!GO:0006457;protein folding;4.61443721904121e-19!GO:0012505;endomembrane system;4.61443721904121e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;4.89235819846372e-19!GO:0017111;nucleoside-triphosphatase activity;1.02724779090206e-18!GO:0006259;DNA metabolic process;1.06278492751008e-18!GO:0005783;endoplasmic reticulum;3.20078653982611e-18!GO:0005746;mitochondrial respiratory chain;6.3813368802595e-18!GO:0005730;nucleolus;1.40968112366099e-17!GO:0044451;nucleoplasm part;2.01914544973016e-17!GO:0016874;ligase activity;2.39071622577988e-17!GO:0000502;proteasome complex (sensu Eukaryota);3.80527953504582e-17!GO:0051186;cofactor metabolic process;1.49888569279415e-16!GO:0006512;ubiquitin cycle;1.51699845857462e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.78063986679492e-16!GO:0005761;mitochondrial ribosome;4.20247630722465e-16!GO:0000313;organellar ribosome;4.20247630722465e-16!GO:0017076;purine nucleotide binding;5.31048673418967e-16!GO:0016192;vesicle-mediated transport;6.91757056303345e-16!GO:0005794;Golgi apparatus;8.08467304632939e-16!GO:0022618;protein-RNA complex assembly;9.70172301444102e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.70657904824529e-16!GO:0032553;ribonucleotide binding;1.10746040255304e-15!GO:0032555;purine ribonucleotide binding;1.10746040255304e-15!GO:0007049;cell cycle;1.11586422619725e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.96467601445033e-15!GO:0003954;NADH dehydrogenase activity;1.96467601445033e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.96467601445033e-15!GO:0044265;cellular macromolecule catabolic process;2.80449720726489e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.40757865288511e-15!GO:0043285;biopolymer catabolic process;4.64827306480206e-15!GO:0044432;endoplasmic reticulum part;7.12466077680715e-15!GO:0048770;pigment granule;1.16514448807759e-14!GO:0042470;melanosome;1.16514448807759e-14!GO:0009057;macromolecule catabolic process;1.51896112843551e-14!GO:0006605;protein targeting;2.10051356463368e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.63675986558868e-14!GO:0043412;biopolymer modification;2.8612977456587e-14!GO:0044248;cellular catabolic process;3.84982097329733e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;4.20590065484508e-14!GO:0019941;modification-dependent protein catabolic process;5.59991923660897e-14!GO:0043632;modification-dependent macromolecule catabolic process;5.59991923660897e-14!GO:0044257;cellular protein catabolic process;6.63804613655829e-14!GO:0008135;translation factor activity, nucleic acid binding;9.43534821427517e-14!GO:0051082;unfolded protein binding;9.67670730932811e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.08369841790317e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.23232481483727e-13!GO:0045271;respiratory chain complex I;1.23232481483727e-13!GO:0005747;mitochondrial respiratory chain complex I;1.23232481483727e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.52824611604299e-13!GO:0042773;ATP synthesis coupled electron transport;1.52824611604299e-13!GO:0008134;transcription factor binding;1.64941892125252e-13!GO:0048193;Golgi vesicle transport;2.77931804840169e-13!GO:0006464;protein modification process;3.38451873949785e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.36052228720896e-13!GO:0012501;programmed cell death;4.70964399648738e-13!GO:0006915;apoptosis;4.80161520502526e-13!GO:0030163;protein catabolic process;4.9740406466411e-13!GO:0009055;electron carrier activity;1.01553705312268e-12!GO:0042254;ribosome biogenesis and assembly;1.62950167077843e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.71682544689646e-12!GO:0000375;RNA splicing, via transesterification reactions;1.71682544689646e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.71682544689646e-12!GO:0006732;coenzyme metabolic process;2.56045735479283e-12!GO:0009259;ribonucleotide metabolic process;5.13211664240621e-12!GO:0006163;purine nucleotide metabolic process;6.75953350110666e-12!GO:0022402;cell cycle process;7.86734943261081e-12!GO:0009150;purine ribonucleotide metabolic process;9.74507794111775e-12!GO:0030554;adenyl nucleotide binding;1.70497958566561e-11!GO:0005524;ATP binding;2.6331529929179e-11!GO:0032559;adenyl ribonucleotide binding;2.6918352903295e-11!GO:0008219;cell death;2.71834579918094e-11!GO:0016265;death;2.71834579918094e-11!GO:0043687;post-translational protein modification;3.5331097400817e-11!GO:0006164;purine nucleotide biosynthetic process;7.01291790971155e-11!GO:0008565;protein transporter activity;8.25396377213031e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.72697287027326e-11!GO:0009152;purine ribonucleotide biosynthetic process;9.77700169559501e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.21340631186788e-10!GO:0009260;ribonucleotide biosynthetic process;1.29444998171271e-10!GO:0005635;nuclear envelope;1.31720313635802e-10!GO:0003743;translation initiation factor activity;2.07730995794158e-10!GO:0009199;ribonucleoside triphosphate metabolic process;2.1040148428265e-10!GO:0005789;endoplasmic reticulum membrane;2.59919582747451e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.08514429789913e-10!GO:0009144;purine nucleoside triphosphate metabolic process;3.08514429789913e-10!GO:0006974;response to DNA damage stimulus;3.85297418862053e-10!GO:0009141;nucleoside triphosphate metabolic process;3.9850608890474e-10!GO:0006461;protein complex assembly;4.52384616815343e-10!GO:0008639;small protein conjugating enzyme activity;6.84068359417694e-10!GO:0042623;ATPase activity, coupled;6.99853685780061e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.02682566412586e-10!GO:0006413;translational initiation;1.0836017290211e-09!GO:0009056;catabolic process;1.39279729716458e-09!GO:0005793;ER-Golgi intermediate compartment;1.39279729716458e-09!GO:0004842;ubiquitin-protein ligase activity;1.44707273412847e-09!GO:0000278;mitotic cell cycle;1.71263825673257e-09!GO:0044453;nuclear membrane part;2.01652820807536e-09!GO:0016887;ATPase activity;2.05617636752445e-09!GO:0009142;nucleoside triphosphate biosynthetic process;2.50910494675754e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.50910494675754e-09!GO:0006446;regulation of translational initiation;2.52051329093661e-09!GO:0051726;regulation of cell cycle;2.64850718455722e-09!GO:0006399;tRNA metabolic process;2.89444507625579e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.65113497252772e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.65113497252772e-09!GO:0019787;small conjugating protein ligase activity;3.79776704838056e-09!GO:0015986;ATP synthesis coupled proton transport;3.79776704838056e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.79776704838056e-09!GO:0000074;regulation of progression through cell cycle;4.33853454518493e-09!GO:0031965;nuclear membrane;4.80990162589557e-09!GO:0006913;nucleocytoplasmic transport;5.23250695478787e-09!GO:0046034;ATP metabolic process;5.29833026620687e-09!GO:0003712;transcription cofactor activity;5.77989841688785e-09!GO:0003676;nucleic acid binding;5.78098005255468e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.30592729820222e-09!GO:0016604;nuclear body;8.40629416204436e-09!GO:0006916;anti-apoptosis;8.40629416204436e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.12317911588531e-08!GO:0051169;nuclear transport;1.15402860286087e-08!GO:0042981;regulation of apoptosis;1.27216517339351e-08!GO:0051188;cofactor biosynthetic process;1.33509836334797e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.41889427927472e-08!GO:0043067;regulation of programmed cell death;1.70496083655516e-08!GO:0006364;rRNA processing;1.76660971291987e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.0954931863948e-08!GO:0031988;membrane-bound vesicle;2.21006826282035e-08!GO:0019829;cation-transporting ATPase activity;2.46231493883513e-08!GO:0007005;mitochondrion organization and biogenesis;2.51994328617934e-08!GO:0065002;intracellular protein transport across a membrane;2.71647991480421e-08!GO:0016072;rRNA metabolic process;2.90236705091666e-08!GO:0009719;response to endogenous stimulus;3.40431172447349e-08!GO:0003924;GTPase activity;3.62258431669697e-08!GO:0005643;nuclear pore;3.88536797240967e-08!GO:0017038;protein import;4.01558241741571e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.6912233144426e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.86133801411539e-08!GO:0031252;leading edge;5.10394170675025e-08!GO:0016881;acid-amino acid ligase activity;5.3891200924045e-08!GO:0006281;DNA repair;5.3891200924045e-08!GO:0006754;ATP biosynthetic process;5.55538926930436e-08!GO:0006753;nucleoside phosphate metabolic process;5.55538926930436e-08!GO:0005839;proteasome core complex (sensu Eukaryota);8.34086083581375e-08!GO:0005768;endosome;9.09657387066e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;9.22275173881399e-08!GO:0043069;negative regulation of programmed cell death;1.04926258900385e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.13946251110933e-07!GO:0009060;aerobic respiration;1.1812997123603e-07!GO:0016787;hydrolase activity;1.21553505660656e-07!GO:0043066;negative regulation of apoptosis;1.27174585574882e-07!GO:0005773;vacuole;1.41066568841342e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.54760230814118e-07!GO:0006260;DNA replication;1.6825213141234e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.79864744117627e-07!GO:0016491;oxidoreductase activity;1.93730533056326e-07!GO:0005525;GTP binding;1.93730533056326e-07!GO:0009117;nucleotide metabolic process;1.9645199673643e-07!GO:0046930;pore complex;2.00830899603131e-07!GO:0048523;negative regulation of cellular process;2.41317347593641e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.82525155877789e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.82525155877789e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.82525155877789e-07!GO:0006323;DNA packaging;2.82525155877789e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.2099491874626e-07!GO:0048475;coated membrane;3.5860609543289e-07!GO:0030117;membrane coat;3.5860609543289e-07!GO:0030120;vesicle coat;4.43310350486679e-07!GO:0030662;coated vesicle membrane;4.43310350486679e-07!GO:0065004;protein-DNA complex assembly;5.45953674904084e-07!GO:0016070;RNA metabolic process;5.64400953846956e-07!GO:0043038;amino acid activation;6.00554844901938e-07!GO:0006418;tRNA aminoacylation for protein translation;6.00554844901938e-07!GO:0043039;tRNA aminoacylation;6.00554844901938e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.00554844901938e-07!GO:0031982;vesicle;6.61493026291393e-07!GO:0016779;nucleotidyltransferase activity;6.83430098885346e-07!GO:0009108;coenzyme biosynthetic process;6.90665408411485e-07!GO:0051276;chromosome organization and biogenesis;7.13431741452878e-07!GO:0004298;threonine endopeptidase activity;7.24883514472755e-07!GO:0045333;cellular respiration;7.42033607374892e-07!GO:0031410;cytoplasmic vesicle;7.94828704671973e-07!GO:0004386;helicase activity;9.44657695923427e-07!GO:0005788;endoplasmic reticulum lumen;9.44657695923427e-07!GO:0006333;chromatin assembly or disassembly;9.79333388302756e-07!GO:0045259;proton-transporting ATP synthase complex;1.02619358519737e-06!GO:0006793;phosphorus metabolic process;1.12366210731295e-06!GO:0006796;phosphate metabolic process;1.12366210731295e-06!GO:0044431;Golgi apparatus part;1.20273222319906e-06!GO:0008026;ATP-dependent helicase activity;1.27587558112901e-06!GO:0051246;regulation of protein metabolic process;1.74665914923679e-06!GO:0000323;lytic vacuole;1.86678072285726e-06!GO:0005764;lysosome;1.86678072285726e-06!GO:0016740;transferase activity;1.94201756957996e-06!GO:0016607;nuclear speck;2.10785078791575e-06!GO:0030036;actin cytoskeleton organization and biogenesis;2.1749921497832e-06!GO:0007243;protein kinase cascade;2.18335961430247e-06!GO:0051301;cell division;2.40248056827195e-06!GO:0016310;phosphorylation;2.87108382010303e-06!GO:0032446;protein modification by small protein conjugation;2.89757157194492e-06!GO:0005694;chromosome;2.92597880022678e-06!GO:0006403;RNA localization;2.94975447039905e-06!GO:0050657;nucleic acid transport;2.97108763854288e-06!GO:0051236;establishment of RNA localization;2.97108763854288e-06!GO:0050658;RNA transport;2.97108763854288e-06!GO:0005762;mitochondrial large ribosomal subunit;2.97108763854288e-06!GO:0000315;organellar large ribosomal subunit;2.97108763854288e-06!GO:0048519;negative regulation of biological process;3.45668049511599e-06!GO:0000087;M phase of mitotic cell cycle;3.9788199277811e-06!GO:0016567;protein ubiquitination;4.0501525444876e-06!GO:0045454;cell redox homeostasis;4.0501525444876e-06!GO:0044427;chromosomal part;4.27540850974869e-06!GO:0032561;guanyl ribonucleotide binding;4.28530797706169e-06!GO:0019001;guanyl nucleotide binding;4.28530797706169e-06!GO:0006099;tricarboxylic acid cycle;4.81347237048275e-06!GO:0046356;acetyl-CoA catabolic process;4.81347237048275e-06!GO:0007067;mitosis;4.84314699532252e-06!GO:0045786;negative regulation of progression through cell cycle;4.97457933427683e-06!GO:0000785;chromatin;6.57711127016447e-06!GO:0006091;generation of precursor metabolites and energy;6.67375543942501e-06!GO:0000245;spliceosome assembly;8.51236813527222e-06!GO:0051187;cofactor catabolic process;8.62334214533411e-06!GO:0007264;small GTPase mediated signal transduction;8.66785988099073e-06!GO:0006334;nucleosome assembly;8.66843814683321e-06!GO:0006752;group transfer coenzyme metabolic process;9.15380739845841e-06!GO:0006084;acetyl-CoA metabolic process;9.28220937090739e-06!GO:0065009;regulation of a molecular function;9.81520000700054e-06!GO:0019867;outer membrane;9.90173055792923e-06!GO:0005770;late endosome;1.14494293262765e-05!GO:0030029;actin filament-based process;1.14494293262765e-05!GO:0005667;transcription factor complex;1.19426178670377e-05!GO:0031968;organelle outer membrane;1.31823153151358e-05!GO:0022403;cell cycle phase;1.32095345534308e-05!GO:0044440;endosomal part;1.53359571612618e-05!GO:0010008;endosome membrane;1.53359571612618e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.55064411919377e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.70119413249863e-05!GO:0031497;chromatin assembly;1.81583525380251e-05!GO:0016044;membrane organization and biogenesis;2.2672746498473e-05!GO:0019899;enzyme binding;2.59659295959752e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.72182700617798e-05!GO:0005741;mitochondrial outer membrane;2.79300025943992e-05!GO:0008047;enzyme activator activity;2.89656415456521e-05!GO:0051170;nuclear import;2.89656415456521e-05!GO:0003724;RNA helicase activity;2.95618742024549e-05!GO:0000139;Golgi membrane;3.17976046394519e-05!GO:0050794;regulation of cellular process;3.28239309810927e-05!GO:0000151;ubiquitin ligase complex;3.37182103451107e-05!GO:0003899;DNA-directed RNA polymerase activity;3.84423868953959e-05!GO:0003713;transcription coactivator activity;4.20041699017499e-05!GO:0009109;coenzyme catabolic process;4.30812355642116e-05!GO:0043623;cellular protein complex assembly;4.43161353428983e-05!GO:0006366;transcription from RNA polymerase II promoter;4.80960046071477e-05!GO:0006606;protein import into nucleus;5.40057525550807e-05!GO:0051028;mRNA transport;5.54491180791342e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.80139460571049e-05!GO:0015399;primary active transmembrane transporter activity;5.80139460571049e-05!GO:0006613;cotranslational protein targeting to membrane;5.99640106400126e-05!GO:0005798;Golgi-associated vesicle;6.64950309200584e-05!GO:0000314;organellar small ribosomal subunit;6.95015932145121e-05!GO:0005763;mitochondrial small ribosomal subunit;6.95015932145121e-05!GO:0005769;early endosome;7.31462605565245e-05!GO:0030867;rough endoplasmic reticulum membrane;7.55598201856136e-05!GO:0003697;single-stranded DNA binding;7.6989350836535e-05!GO:0051087;chaperone binding;9.91082514951826e-05!GO:0016853;isomerase activity;0.000100516339595638!GO:0043681;protein import into mitochondrion;0.000106912192976102!GO:0015630;microtubule cytoskeleton;0.000107130910226706!GO:0006414;translational elongation;0.000116961198000531!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000121702405214129!GO:0008654;phospholipid biosynthetic process;0.000122798354262332!GO:0009165;nucleotide biosynthetic process;0.000124165876855707!GO:0033116;ER-Golgi intermediate compartment membrane;0.000124165876855707!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000131368004277639!GO:0008092;cytoskeletal protein binding;0.000150753242967831!GO:0008632;apoptotic program;0.00018579904870541!GO:0005048;signal sequence binding;0.000187804770547227!GO:0005813;centrosome;0.000188585883087953!GO:0016563;transcription activator activity;0.000191061466681171!GO:0048522;positive regulation of cellular process;0.000195882136172188!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000215842849870459!GO:0042802;identical protein binding;0.000224048051420009!GO:0006626;protein targeting to mitochondrion;0.000232529850800151!GO:0006839;mitochondrial transport;0.000282237276822929!GO:0003714;transcription corepressor activity;0.000307984764633814!GO:0001726;ruffle;0.0003129323070224!GO:0043021;ribonucleoprotein binding;0.000319467053834084!GO:0048471;perinuclear region of cytoplasm;0.000334285370814848!GO:0015992;proton transport;0.000376063527604532!GO:0005096;GTPase activator activity;0.000397893199361519!GO:0006818;hydrogen transport;0.00039836560803112!GO:0006950;response to stress;0.000403792134907343!GO:0007010;cytoskeleton organization and biogenesis;0.00043323072027174!GO:0006612;protein targeting to membrane;0.000435286298005223!GO:0008186;RNA-dependent ATPase activity;0.00044427157755934!GO:0016859;cis-trans isomerase activity;0.000456788446933774!GO:0050790;regulation of catalytic activity;0.000467202587138919!GO:0007006;mitochondrial membrane organization and biogenesis;0.000467202587138919!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000467202587138919!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000467202587138919!GO:0019843;rRNA binding;0.000477786950801145!GO:0043566;structure-specific DNA binding;0.000517830152186975!GO:0005885;Arp2/3 protein complex;0.000581330034783676!GO:0005815;microtubule organizing center;0.000610959816269754!GO:0043492;ATPase activity, coupled to movement of substances;0.000615127177667388!GO:0005905;coated pit;0.000623416899422225!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000675432722970453!GO:0016568;chromatin modification;0.000680378535725428!GO:0051920;peroxiredoxin activity;0.000738681719890357!GO:0015980;energy derivation by oxidation of organic compounds;0.000744569211947175!GO:0051427;hormone receptor binding;0.000748385122553781!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000765097603720788!GO:0000279;M phase;0.000865095973501558!GO:0007242;intracellular signaling cascade;0.000869786765611223!GO:0030027;lamellipodium;0.000895613290413318!GO:0005774;vacuolar membrane;0.000935282725855143!GO:0031072;heat shock protein binding;0.000948521335919654!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000965023051049993!GO:0030880;RNA polymerase complex;0.00100144562598574!GO:0008250;oligosaccharyl transferase complex;0.00105579187756165!GO:0007265;Ras protein signal transduction;0.00106492642137646!GO:0030133;transport vesicle;0.00106492642137646!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00107206398533453!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00107206398533453!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00107206398533453!GO:0048487;beta-tubulin binding;0.00110076931807601!GO:0004004;ATP-dependent RNA helicase activity;0.00111427294571888!GO:0051329;interphase of mitotic cell cycle;0.00113365715337459!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00119554165572635!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0012027018803505!GO:0009967;positive regulation of signal transduction;0.00123343116176459!GO:0016564;transcription repressor activity;0.00123343116176459!GO:0008033;tRNA processing;0.00131484459455725!GO:0051325;interphase;0.001402123843897!GO:0035257;nuclear hormone receptor binding;0.00140619457745784!GO:0051789;response to protein stimulus;0.00158286941923215!GO:0006986;response to unfolded protein;0.00158286941923215!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0015998946321223!GO:0004576;oligosaccharyl transferase activity;0.00161958403250963!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00167554961244006!GO:0044452;nucleolar part;0.00172315410378673!GO:0045045;secretory pathway;0.00172933569145848!GO:0044262;cellular carbohydrate metabolic process;0.00178828717708207!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00190786812977265!GO:0030658;transport vesicle membrane;0.0019804691912968!GO:0043284;biopolymer biosynthetic process;0.0019840999935583!GO:0030118;clathrin coat;0.00222857062682048!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0022792908020528!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00229742859697053!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00229742859697053!GO:0044437;vacuolar part;0.00235624835687896!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00245596774328915!GO:0000428;DNA-directed RNA polymerase complex;0.00245596774328915!GO:0046483;heterocycle metabolic process;0.00245754003701634!GO:0050789;regulation of biological process;0.00260862951048701!GO:0022890;inorganic cation transmembrane transporter activity;0.00260862951048701!GO:0000059;protein import into nucleus, docking;0.00289827869495434!GO:0000786;nucleosome;0.00292762466159001!GO:0005765;lysosomal membrane;0.00301929620868231!GO:0006509;membrane protein ectodomain proteolysis;0.00311941624501685!GO:0033619;membrane protein proteolysis;0.00311941624501685!GO:0007050;cell cycle arrest;0.00320658325308327!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00339509279883806!GO:0015002;heme-copper terminal oxidase activity;0.00339509279883806!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00339509279883806!GO:0004129;cytochrome-c oxidase activity;0.00339509279883806!GO:0018196;peptidyl-asparagine modification;0.0034002306988456!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0034002306988456!GO:0008361;regulation of cell size;0.00341353874347566!GO:0007040;lysosome organization and biogenesis;0.00364636818863692!GO:0048660;regulation of smooth muscle cell proliferation;0.00367775729693779!GO:0030659;cytoplasmic vesicle membrane;0.00367775729693779!GO:0008139;nuclear localization sequence binding;0.00377820397283773!GO:0017166;vinculin binding;0.00425349745074761!GO:0006383;transcription from RNA polymerase III promoter;0.00425810574661669!GO:0016049;cell growth;0.00439509437952428!GO:0030663;COPI coated vesicle membrane;0.00469289952723872!GO:0030126;COPI vesicle coat;0.00469289952723872!GO:0051168;nuclear export;0.0047647878959091!GO:0050662;coenzyme binding;0.00477788792852474!GO:0015036;disulfide oxidoreductase activity;0.00482330267730762!GO:0046474;glycerophospholipid biosynthetic process;0.0050395146754197!GO:0006897;endocytosis;0.00507711422257442!GO:0010324;membrane invagination;0.00507711422257442!GO:0005819;spindle;0.00508229799852255!GO:0030660;Golgi-associated vesicle membrane;0.00522328097938139!GO:0006595;polyamine metabolic process;0.0052563436204651!GO:0003746;translation elongation factor activity;0.00539436435383486!GO:0046467;membrane lipid biosynthetic process;0.00540890084374429!GO:0006979;response to oxidative stress;0.00604780672462116!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00605697061371577!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00613310337031282!GO:0006891;intra-Golgi vesicle-mediated transport;0.00632289671568395!GO:0001558;regulation of cell growth;0.006419098958816!GO:0007266;Rho protein signal transduction;0.00645713682400709!GO:0030137;COPI-coated vesicle;0.00651282092115878!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00668502366668015!GO:0003729;mRNA binding;0.00679570843781057!GO:0016197;endosome transport;0.00692095131201594!GO:0030041;actin filament polymerization;0.00706364381737976!GO:0005684;U2-dependent spliceosome;0.00747638191523359!GO:0046489;phosphoinositide biosynthetic process;0.00756676821164626!GO:0005791;rough endoplasmic reticulum;0.00796192787545105!GO:0015631;tubulin binding;0.00796192787545105!GO:0007033;vacuole organization and biogenesis;0.00805748304880243!GO:0003684;damaged DNA binding;0.00805769694178675!GO:0030119;AP-type membrane coat adaptor complex;0.00826879675859769!GO:0006778;porphyrin metabolic process;0.00833616252544317!GO:0033013;tetrapyrrole metabolic process;0.00833616252544317!GO:0006118;electron transport;0.00837579017953536!GO:0030134;ER to Golgi transport vesicle;0.00838692004580415!GO:0043488;regulation of mRNA stability;0.0085519718616024!GO:0043487;regulation of RNA stability;0.0085519718616024!GO:0030132;clathrin coat of coated pit;0.00861858369595309!GO:0044433;cytoplasmic vesicle part;0.00874930655633454!GO:0051540;metal cluster binding;0.00909318536439948!GO:0051536;iron-sulfur cluster binding;0.00909318536439948!GO:0031902;late endosome membrane;0.00920697520237378!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00921995937019395!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00929761346619782!GO:0048500;signal recognition particle;0.00929761346619782!GO:0009966;regulation of signal transduction;0.00961931714946486!GO:0016363;nuclear matrix;0.00966932444515093!GO:0030695;GTPase regulator activity;0.00968172493316045!GO:0005083;small GTPase regulator activity;0.0097530715354136!GO:0006261;DNA-dependent DNA replication;0.0097530715354136!GO:0051252;regulation of RNA metabolic process;0.0101964086986524!GO:0048518;positive regulation of biological process;0.0103466456078215!GO:0030127;COPII vesicle coat;0.0104762712907539!GO:0012507;ER to Golgi transport vesicle membrane;0.0104762712907539!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0105028911647184!GO:0042168;heme metabolic process;0.0109015628361825!GO:0048659;smooth muscle cell proliferation;0.011170725553815!GO:0006643;membrane lipid metabolic process;0.0115092231296951!GO:0005832;chaperonin-containing T-complex;0.0121296773223085!GO:0004177;aminopeptidase activity;0.0121364798850795!GO:0022408;negative regulation of cell-cell adhesion;0.0122280718258232!GO:0005869;dynactin complex;0.0122410984474399!GO:0000049;tRNA binding;0.0122677519817989!GO:0030521;androgen receptor signaling pathway;0.0123693549147468!GO:0000287;magnesium ion binding;0.0125645155865073!GO:0051539;4 iron, 4 sulfur cluster binding;0.0131874441403057!GO:0043086;negative regulation of catalytic activity;0.0131874441403057!GO:0008312;7S RNA binding;0.0133244702814903!GO:0043022;ribosome binding;0.0133966244186778!GO:0030131;clathrin adaptor complex;0.0134338147744324!GO:0006289;nucleotide-excision repair;0.013661772353473!GO:0006401;RNA catabolic process;0.0137930258827748!GO:0004197;cysteine-type endopeptidase activity;0.0137930258827748!GO:0051348;negative regulation of transferase activity;0.0138137085504564!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0139002269008976!GO:0003779;actin binding;0.0140001448585269!GO:0033673;negative regulation of kinase activity;0.0140014410578865!GO:0006469;negative regulation of protein kinase activity;0.0140014410578865!GO:0031901;early endosome membrane;0.0140276313208322!GO:0051101;regulation of DNA binding;0.0143108932354922!GO:0043433;negative regulation of transcription factor activity;0.0146348649456502!GO:0007162;negative regulation of cell adhesion;0.0147573727964698!GO:0012506;vesicle membrane;0.015484412905451!GO:0000209;protein polyubiquitination;0.015484412905451!GO:0051098;regulation of binding;0.015484412905451!GO:0048468;cell development;0.015484412905451!GO:0035035;histone acetyltransferase binding;0.015484412905451!GO:0008234;cysteine-type peptidase activity;0.0156729028667408!GO:0006352;transcription initiation;0.0157150142768601!GO:0006082;organic acid metabolic process;0.0161233962953892!GO:0046519;sphingoid metabolic process;0.0163618730450204!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0163964627541183!GO:0031625;ubiquitin protein ligase binding;0.0164580977923237!GO:0016272;prefoldin complex;0.0164580977923237!GO:0008154;actin polymerization and/or depolymerization;0.0165264162752994!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0166429976642699!GO:0006650;glycerophospholipid metabolic process;0.016741443403296!GO:0008180;signalosome;0.016905004368928!GO:0030125;clathrin vesicle coat;0.0180468107394582!GO:0030665;clathrin coated vesicle membrane;0.0180468107394582!GO:0000082;G1/S transition of mitotic cell cycle;0.018074989609015!GO:0005758;mitochondrial intermembrane space;0.0182288661258168!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0185041149781612!GO:0045047;protein targeting to ER;0.0185041149781612!GO:0019752;carboxylic acid metabolic process;0.0185563579118907!GO:0007034;vacuolar transport;0.0187256548915699!GO:0051338;regulation of transferase activity;0.0187965595067495!GO:0006740;NADPH regeneration;0.0187965595067495!GO:0006098;pentose-phosphate shunt;0.0187965595067495!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0191614423575863!GO:0031970;organelle envelope lumen;0.0192418038615475!GO:0006402;mRNA catabolic process;0.0198007548498263!GO:0051287;NAD binding;0.0200461639443556!GO:0032940;secretion by cell;0.0201231181963388!GO:0003756;protein disulfide isomerase activity;0.0205205301640922!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0205205301640922!GO:0008637;apoptotic mitochondrial changes;0.020705881806551!GO:0040008;regulation of growth;0.0207843565863298!GO:0035258;steroid hormone receptor binding;0.0209790871213835!GO:0009303;rRNA transcription;0.0211090976279203!GO:0001953;negative regulation of cell-matrix adhesion;0.0211229211498043!GO:0030032;lamellipodium biogenesis;0.0215523651646749!GO:0006497;protein amino acid lipidation;0.0224774691246487!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0224979777062379!GO:0016408;C-acyltransferase activity;0.0226450699892059!GO:0050811;GABA receptor binding;0.022867395553579!GO:0030833;regulation of actin filament polymerization;0.0236737458559545!GO:0051059;NF-kappaB binding;0.0236737458559545!GO:0065007;biological regulation;0.0236983164773976!GO:0006611;protein export from nucleus;0.0238718991496413!GO:0030176;integral to endoplasmic reticulum membrane;0.0240983775904569!GO:0003678;DNA helicase activity;0.0244518754165583!GO:0047485;protein N-terminus binding;0.0245258078762522!GO:0008538;proteasome activator activity;0.0261879988416111!GO:0005669;transcription factor TFIID complex;0.026484896545158!GO:0019206;nucleoside kinase activity;0.0268922512118164!GO:0022415;viral reproductive process;0.0276383325344932!GO:0031324;negative regulation of cellular metabolic process;0.0284619493358254!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0286989287827571!GO:0004518;nuclease activity;0.0287512036234614!GO:0006672;ceramide metabolic process;0.0293236444932274!GO:0007021;tubulin folding;0.0294345259801668!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0300466406051727!GO:0005099;Ras GTPase activator activity;0.0307087516472152!GO:0031124;mRNA 3'-end processing;0.0320389439150328!GO:0043065;positive regulation of apoptosis;0.0322840460032841!GO:0001952;regulation of cell-matrix adhesion;0.032289489337965!GO:0003711;transcription elongation regulator activity;0.0323351601290549!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0330511009281954!GO:0043549;regulation of kinase activity;0.0331418993573297!GO:0045859;regulation of protein kinase activity;0.0331896051930808!GO:0007044;cell-substrate junction assembly;0.033385526750401!GO:0043281;regulation of caspase activity;0.0334942358252396!GO:0032508;DNA duplex unwinding;0.0339545062126178!GO:0032392;DNA geometric change;0.0339545062126178!GO:0006378;mRNA polyadenylation;0.0342725980595611!GO:0000339;RNA cap binding;0.0347970365470284!GO:0032507;maintenance of cellular protein localization;0.0347970365470284!GO:0043068;positive regulation of programmed cell death;0.0351457430869776!GO:0006779;porphyrin biosynthetic process;0.0351971704275984!GO:0033014;tetrapyrrole biosynthetic process;0.0351971704275984!GO:0006220;pyrimidine nucleotide metabolic process;0.0351971704275984!GO:0030100;regulation of endocytosis;0.0357780134474831!GO:0006749;glutathione metabolic process;0.0357780134474831!GO:0006635;fatty acid beta-oxidation;0.03591586685106!GO:0006919;caspase activation;0.0359773246639145!GO:0006308;DNA catabolic process;0.0368499354385214!GO:0046822;regulation of nucleocytoplasmic transport;0.0368499354385214!GO:0048144;fibroblast proliferation;0.0368499354385214!GO:0048145;regulation of fibroblast proliferation;0.0368499354385214!GO:0006458;'de novo' protein folding;0.036871252085324!GO:0051084;'de novo' posttranslational protein folding;0.036871252085324!GO:0016601;Rac protein signal transduction;0.0374814800587286!GO:0005092;GDP-dissociation inhibitor activity;0.037571307969911!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0375951782672472!GO:0045039;protein import into mitochondrial inner membrane;0.0375951782672472!GO:0004860;protein kinase inhibitor activity;0.0379781727867557!GO:0019904;protein domain specific binding;0.0380803584317593!GO:0009116;nucleoside metabolic process;0.0381587468832987!GO:0001944;vasculature development;0.0382552252231309!GO:0051272;positive regulation of cell motility;0.0383710368313641!GO:0040017;positive regulation of locomotion;0.0383710368313641!GO:0005784;translocon complex;0.0386209299503194!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0387720943172656!GO:0006892;post-Golgi vesicle-mediated transport;0.0387781551517927!GO:0008320;protein transmembrane transporter activity;0.0388353317034843!GO:0016301;kinase activity;0.0390191946652042!GO:0022407;regulation of cell-cell adhesion;0.03905616543802!GO:0030145;manganese ion binding;0.0390765954224935!GO:0016126;sterol biosynthetic process;0.0393133505238299!GO:0051336;regulation of hydrolase activity;0.039345921675397!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0396802513079889!GO:0005637;nuclear inner membrane;0.0408144383197147!GO:0030508;thiol-disulfide exchange intermediate activity;0.0411257426370188!GO:0006807;nitrogen compound metabolic process;0.0414143814093611!GO:0006376;mRNA splice site selection;0.0415451512710968!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0415451512710968!GO:0016251;general RNA polymerase II transcription factor activity;0.0417175460617913!GO:0003690;double-stranded DNA binding;0.0425125628288346!GO:0009892;negative regulation of metabolic process;0.0432978376908371!GO:0006506;GPI anchor biosynthetic process;0.0441140313512842!GO:0000075;cell cycle checkpoint;0.0443171562022843!GO:0030911;TPR domain binding;0.0445285188039014!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0448226573632494!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0450500906882367!GO:0015035;protein disulfide oxidoreductase activity;0.0452524285174096!GO:0005657;replication fork;0.0462077805839593!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0466105640484748!GO:0045185;maintenance of protein localization;0.0467712328636901!GO:0006783;heme biosynthetic process;0.0469048971889503!GO:0008022;protein C-terminus binding;0.0470482404459105!GO:0006144;purine base metabolic process;0.0470482404459105!GO:0008243;plasminogen activator activity;0.0472166967015844!GO:0006405;RNA export from nucleus;0.0472257285275426!GO:0001836;release of cytochrome c from mitochondria;0.0476020458639754!GO:0042158;lipoprotein biosynthetic process;0.0479326860343566!GO:0043189;H4/H2A histone acetyltransferase complex;0.048161913764096!GO:0004680;casein kinase activity;0.0484231638759549!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0490957651727018!GO:0046209;nitric oxide metabolic process;0.0491010023771358!GO:0006809;nitric oxide biosynthetic process;0.0491010023771358 | |||
|sample_id=11342 | |sample_id=11342 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=capillary | |sample_tissue=capillary | ||
|top_motifs=SOX{8,9,10}:1.95235747958;TLX1..3_NFIC{dimer}:1.19588092069;FOX{I1,J2}:1.18811855432;HBP1_HMGB_SSRP1_UBTF:1.1831542802;ZNF423:1.09745975905;PAX6:1.0927220613;NFATC1..3:1.08724706923;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.989438279604;ALX1:0.931798218759;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.898885048691;SOX17:0.89057401261;GFI1B:0.862218601889;GATA6:0.850602405068;NR5A1,2:0.841532202337;RXR{A,B,G}:0.816021354632;IKZF2:0.814786407026;ELF1,2,4:0.776041897709;TP53:0.771239392818;ETS1,2:0.714422627963;SPZ1:0.714032269419;LEF1_TCF7_TCF7L1,2:0.704030341387;ADNP_IRX_SIX_ZHX:0.698802606207;POU6F1:0.697924469504;HES1:0.682369961237;T:0.679312933404;SOX2:0.669797845388;POU3F1..4:0.662440136268;ZNF238:0.652506564601;RBPJ:0.651267812055;TBP:0.638178648231;HAND1,2:0.606702471995;SPIB:0.56042308603;FOXQ1:0.522501839333;PAX1,9:0.513654782123;TFAP4:0.447636721306;NFE2:0.438058064745;NFE2L1:0.432910472748;STAT2,4,6:0.415714539467;GCM1,2:0.413603620911;LHX3,4:0.405000156283;bHLH_family:0.371921167589;FOXA2:0.369707996585;TFAP2{A,C}:0.351333846765;ZNF148:0.35061510959;HOX{A5,B5}:0.340130110182;AR:0.339346974681;ZIC1..3:0.339077670613;POU1F1:0.33500076792;POU2F1..3:0.314129395718;ONECUT1,2:0.305591586076;NKX2-3_NKX2-5:0.305405893188;GZF1:0.286038018965;SOX5:0.281024890881;IKZF1:0.280961971153;REST:0.277531647968;MYOD1:0.244584400006;NFE2L2:0.225553211475;FOXL1:0.225185442534;ARID5B:0.220740989313;FOX{F1,F2,J1}:0.212764587274;HNF4A_NR2F1,2:0.196584556955;PBX1:0.190477916085;BACH2:0.173386868676;NANOG:0.162761287903;TEAD1:0.131366053212;SP1:0.115694826596;ZBTB6:0.109765187415;FOS_FOS{B,L1}_JUN{B,D}:0.107543266933;HIC1:0.100150874406;CRX:0.0983263665518;FOSL2:0.0930776352377;YY1:0.0861501358509;LMO2:0.0809705740828;EBF1:0.0799519250283;PITX1..3:0.0756550473615;ATF6:0.0747872016561;NKX2-2,8:0.052537209052;PAX5:0.0484388390897;SRF:0.0459144357131;GTF2A1,2:0.0297963192897;NFKB1_REL_RELA:0.00167291559455;MEF2{A,B,C,D}:-0.0256657353395;TEF:-0.0262851123989;NHLH1,2:-0.0328759668865;XCPE1{core}:-0.0612242748263;STAT5{A,B}:-0.0620888986738;NR3C1:-0.06628707334;NANOG{mouse}:-0.0855552873216;DBP:-0.0861082232112;HNF1A:-0.0882787133788;CEBPA,B_DDIT3:-0.108843141554;TFAP2B:-0.109193045853;STAT1,3:-0.111221927016;HIF1A:-0.111973944967;MYB:-0.125873795852;GFI1:-0.127500664893;NR6A1:-0.154496880718;CDC5L:-0.171445450893;UFEwm:-0.174859789986;NRF1:-0.176932590277;ZNF143:-0.178123496787;HSF1,2:-0.184178605124;PAX8:-0.190481828966;CUX2:-0.19453627426;SPI1:-0.19993386874;JUN:-0.202855557978;SMAD1..7,9:-0.210560439374;FOX{D1,D2}:-0.217513917434;GATA4:-0.221749749395;PPARG:-0.244122860863;HOX{A6,A7,B6,B7}:-0.245224831569;DMAP1_NCOR{1,2}_SMARC:-0.248734148237;TBX4,5:-0.25955619427;TAL1_TCF{3,4,12}:-0.260359409702;RORA:-0.268467472168;ZEB1:-0.297653524771;IRF1,2:-0.30529310689;MTF1:-0.316494730864;ATF2:-0.326365868969;EGR1..3:-0.331841625991;MED-1{core}:-0.33873489918;PATZ1:-0.346983849604;AHR_ARNT_ARNT2:-0.361992224684;ZFP161:-0.37254525786;MTE{core}:-0.383193871977;TGIF1:-0.389040857351;NFY{A,B,C}:-0.399125187803;EN1,2:-0.402726335349;TFCP2:-0.409509648278;GTF2I:-0.409560435734;ESR1:-0.412247162075;ESRRA:-0.430671736507;SNAI1..3:-0.448074730241;PAX4:-0.470522746488;E2F1..5:-0.477441463769;PAX2:-0.48390804819;NKX3-2:-0.484579661924;RFX1:-0.500078263604;FOXM1:-0.509679804276;PRRX1,2:-0.521879123894;VSX1,2:-0.524558301683;TFDP1:-0.526542986291;ALX4:-0.533449556787;PRDM1:-0.568264053865;SREBF1,2:-0.569124455446;ELK1,4_GABP{A,B1}:-0.577785591752;HLF:-0.582769122931;MAFB:-0.601432305561;NFIL3:-0.601460784155;MAZ:-0.603205492644;CREB1:-0.618924332668;RREB1:-0.627178808559;FOXO1,3,4:-0.639137904409;XBP1:-0.639747043912;PDX1:-0.643070967117;KLF4:-0.645449886018;RUNX1..3:-0.699959746795;NFIX:-0.729815545842;EVI1:-0.730915911439;MYFfamily:-0.732422922165;OCT4_SOX2{dimer}:-0.739178288677;PAX3,7:-0.748834484774;HMX1:-0.76541317404;ATF5_CREB3:-0.769525404258;NR1H4:-0.772908089538;AIRE:-0.77551755641;MZF1:-0.785213001313;POU5F1:-0.792505277594;RXRA_VDR{dimer}:-0.79719005617;FOXP1:-0.797942072961;FOXN1:-0.81005289185;FOXP3:-0.849314907654;FOXD3:-0.862943755372;ZBTB16:-0.871108242101;CDX1,2,4:-0.890230270866;IRF7:-0.890502981547;HOX{A4,D4}:-0.910838578463;ATF4:-0.947793614787;ZNF384:-0.95257508863;HOXA9_MEIS1:-0.958415308428;HMGA1,2:-1.0020148988;RFX2..5_RFXANK_RFXAP:-1.02256221783;GLI1..3:-1.02816758816;TOPORS:-1.05546529607;NKX6-1,2:-1.07660896323;MYBL2:-1.08264224906;NKX2-1,4:-1.10962723883;TLX2:-1.19406539137;BREu{core}:-1.21029941464;BPTF:-1.23647353268;NKX3-1:-1.37803287241;EP300:-1.5002291545 | |top_motifs=SOX{8,9,10}:1.95235747958;TLX1..3_NFIC{dimer}:1.19588092069;FOX{I1,J2}:1.18811855432;HBP1_HMGB_SSRP1_UBTF:1.1831542802;ZNF423:1.09745975905;PAX6:1.0927220613;NFATC1..3:1.08724706923;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.989438279604;ALX1:0.931798218759;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.898885048691;SOX17:0.89057401261;GFI1B:0.862218601889;GATA6:0.850602405068;NR5A1,2:0.841532202337;RXR{A,B,G}:0.816021354632;IKZF2:0.814786407026;ELF1,2,4:0.776041897709;TP53:0.771239392818;ETS1,2:0.714422627963;SPZ1:0.714032269419;LEF1_TCF7_TCF7L1,2:0.704030341387;ADNP_IRX_SIX_ZHX:0.698802606207;POU6F1:0.697924469504;HES1:0.682369961237;T:0.679312933404;SOX2:0.669797845388;POU3F1..4:0.662440136268;ZNF238:0.652506564601;RBPJ:0.651267812055;TBP:0.638178648231;HAND1,2:0.606702471995;SPIB:0.56042308603;FOXQ1:0.522501839333;PAX1,9:0.513654782123;TFAP4:0.447636721306;NFE2:0.438058064745;NFE2L1:0.432910472748;STAT2,4,6:0.415714539467;GCM1,2:0.413603620911;LHX3,4:0.405000156283;bHLH_family:0.371921167589;FOXA2:0.369707996585;TFAP2{A,C}:0.351333846765;ZNF148:0.35061510959;HOX{A5,B5}:0.340130110182;AR:0.339346974681;ZIC1..3:0.339077670613;POU1F1:0.33500076792;POU2F1..3:0.314129395718;ONECUT1,2:0.305591586076;NKX2-3_NKX2-5:0.305405893188;GZF1:0.286038018965;SOX5:0.281024890881;IKZF1:0.280961971153;REST:0.277531647968;MYOD1:0.244584400006;NFE2L2:0.225553211475;FOXL1:0.225185442534;ARID5B:0.220740989313;FOX{F1,F2,J1}:0.212764587274;HNF4A_NR2F1,2:0.196584556955;PBX1:0.190477916085;BACH2:0.173386868676;NANOG:0.162761287903;TEAD1:0.131366053212;SP1:0.115694826596;ZBTB6:0.109765187415;FOS_FOS{B,L1}_JUN{B,D}:0.107543266933;HIC1:0.100150874406;CRX:0.0983263665518;FOSL2:0.0930776352377;YY1:0.0861501358509;LMO2:0.0809705740828;EBF1:0.0799519250283;PITX1..3:0.0756550473615;ATF6:0.0747872016561;NKX2-2,8:0.052537209052;PAX5:0.0484388390897;SRF:0.0459144357131;GTF2A1,2:0.0297963192897;NFKB1_REL_RELA:0.00167291559455;MEF2{A,B,C,D}:-0.0256657353395;TEF:-0.0262851123989;NHLH1,2:-0.0328759668865;XCPE1{core}:-0.0612242748263;STAT5{A,B}:-0.0620888986738;NR3C1:-0.06628707334;NANOG{mouse}:-0.0855552873216;DBP:-0.0861082232112;HNF1A:-0.0882787133788;CEBPA,B_DDIT3:-0.108843141554;TFAP2B:-0.109193045853;STAT1,3:-0.111221927016;HIF1A:-0.111973944967;MYB:-0.125873795852;GFI1:-0.127500664893;NR6A1:-0.154496880718;CDC5L:-0.171445450893;UFEwm:-0.174859789986;NRF1:-0.176932590277;ZNF143:-0.178123496787;HSF1,2:-0.184178605124;PAX8:-0.190481828966;CUX2:-0.19453627426;SPI1:-0.19993386874;JUN:-0.202855557978;SMAD1..7,9:-0.210560439374;FOX{D1,D2}:-0.217513917434;GATA4:-0.221749749395;PPARG:-0.244122860863;HOX{A6,A7,B6,B7}:-0.245224831569;DMAP1_NCOR{1,2}_SMARC:-0.248734148237;TBX4,5:-0.25955619427;TAL1_TCF{3,4,12}:-0.260359409702;RORA:-0.268467472168;ZEB1:-0.297653524771;IRF1,2:-0.30529310689;MTF1:-0.316494730864;ATF2:-0.326365868969;EGR1..3:-0.331841625991;MED-1{core}:-0.33873489918;PATZ1:-0.346983849604;AHR_ARNT_ARNT2:-0.361992224684;ZFP161:-0.37254525786;MTE{core}:-0.383193871977;TGIF1:-0.389040857351;NFY{A,B,C}:-0.399125187803;EN1,2:-0.402726335349;TFCP2:-0.409509648278;GTF2I:-0.409560435734;ESR1:-0.412247162075;ESRRA:-0.430671736507;SNAI1..3:-0.448074730241;PAX4:-0.470522746488;E2F1..5:-0.477441463769;PAX2:-0.48390804819;NKX3-2:-0.484579661924;RFX1:-0.500078263604;FOXM1:-0.509679804276;PRRX1,2:-0.521879123894;VSX1,2:-0.524558301683;TFDP1:-0.526542986291;ALX4:-0.533449556787;PRDM1:-0.568264053865;SREBF1,2:-0.569124455446;ELK1,4_GABP{A,B1}:-0.577785591752;HLF:-0.582769122931;MAFB:-0.601432305561;NFIL3:-0.601460784155;MAZ:-0.603205492644;CREB1:-0.618924332668;RREB1:-0.627178808559;FOXO1,3,4:-0.639137904409;XBP1:-0.639747043912;PDX1:-0.643070967117;KLF4:-0.645449886018;RUNX1..3:-0.699959746795;NFIX:-0.729815545842;EVI1:-0.730915911439;MYFfamily:-0.732422922165;OCT4_SOX2{dimer}:-0.739178288677;PAX3,7:-0.748834484774;HMX1:-0.76541317404;ATF5_CREB3:-0.769525404258;NR1H4:-0.772908089538;AIRE:-0.77551755641;MZF1:-0.785213001313;POU5F1:-0.792505277594;RXRA_VDR{dimer}:-0.79719005617;FOXP1:-0.797942072961;FOXN1:-0.81005289185;FOXP3:-0.849314907654;FOXD3:-0.862943755372;ZBTB16:-0.871108242101;CDX1,2,4:-0.890230270866;IRF7:-0.890502981547;HOX{A4,D4}:-0.910838578463;ATF4:-0.947793614787;ZNF384:-0.95257508863;HOXA9_MEIS1:-0.958415308428;HMGA1,2:-1.0020148988;RFX2..5_RFXANK_RFXAP:-1.02256221783;GLI1..3:-1.02816758816;TOPORS:-1.05546529607;NKX6-1,2:-1.07660896323;MYBL2:-1.08264224906;NKX2-1,4:-1.10962723883;TLX2:-1.19406539137;BREu{core}:-1.21029941464;BPTF:-1.23647353268;NKX3-1:-1.37803287241;EP300:-1.5002291545 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11342-117G1;search_select_hide=table117:FF:11342-117G1 | |||
}} | }} | ||
Latest revision as of 17:53, 4 June 2020
| Name: | Endothelial Cells - Microvascular, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11376 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11376
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11376
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0277 |
| 10 | 10 | 0.987 |
| 100 | 100 | 0.274 |
| 101 | 101 | 0.152 |
| 102 | 102 | 0.752 |
| 103 | 103 | 0.682 |
| 104 | 104 | 0.768 |
| 105 | 105 | 0.672 |
| 106 | 106 | 0.143 |
| 107 | 107 | 0.0647 |
| 108 | 108 | 0.528 |
| 109 | 109 | 0.0798 |
| 11 | 11 | 0.0423 |
| 110 | 110 | 0.0531 |
| 111 | 111 | 0.152 |
| 112 | 112 | 0.45 |
| 113 | 113 | 0.664 |
| 114 | 114 | 0.0959 |
| 115 | 115 | 0.363 |
| 116 | 116 | 0.529 |
| 117 | 117 | 0.436 |
| 118 | 118 | 0.491 |
| 119 | 119 | 0.111 |
| 12 | 12 | 0.781 |
| 120 | 120 | 0.0519 |
| 121 | 121 | 0.336 |
| 122 | 122 | 0.215 |
| 123 | 123 | 0.484 |
| 124 | 124 | 0.236 |
| 125 | 125 | 0.173 |
| 126 | 126 | 0.287 |
| 127 | 127 | 0.52 |
| 128 | 128 | 0.448 |
| 129 | 129 | 0.186 |
| 13 | 13 | 0.148 |
| 130 | 130 | 0.911 |
| 131 | 131 | 0.988 |
| 132 | 132 | 0.437 |
| 133 | 133 | 0.229 |
| 134 | 134 | 0.863 |
| 135 | 135 | 0.00758 |
| 136 | 136 | 0.294 |
| 137 | 137 | 0.521 |
| 138 | 138 | 0.674 |
| 139 | 139 | 0.257 |
| 14 | 14 | 0.673 |
| 140 | 140 | 0.548 |
| 141 | 141 | 0.354 |
| 142 | 142 | 0.685 |
| 143 | 143 | 0.133 |
| 144 | 144 | 0.691 |
| 145 | 145 | 0.115 |
| 146 | 146 | 0.0728 |
| 147 | 147 | 0.0894 |
| 148 | 148 | 0.852 |
| 149 | 149 | 0.0671 |
| 15 | 15 | 0.239 |
| 150 | 150 | 0.256 |
| 151 | 151 | 0.374 |
| 152 | 152 | 0.0318 |
| 153 | 153 | 0.684 |
| 154 | 154 | 0.15 |
| 155 | 155 | 0.871 |
| 156 | 156 | 0.181 |
| 157 | 157 | 0.288 |
| 158 | 158 | 0.578 |
| 159 | 159 | 0.234 |
| 16 | 16 | 0.272 |
| 160 | 160 | 0.0893 |
| 161 | 161 | 0.475 |
| 162 | 162 | 0.948 |
| 163 | 163 | 0.624 |
| 164 | 164 | 0.117 |
| 165 | 165 | 0.908 |
| 166 | 166 | 0.362 |
| 167 | 167 | 0.285 |
| 168 | 168 | 0.852 |
| 169 | 169 | 0.0209 |
| 17 | 17 | 0.2 |
| 18 | 18 | 0.145 |
| 19 | 19 | 0.168 |
| 2 | 2 | 0.809 |
| 20 | 20 | 0.878 |
| 21 | 21 | 0.8 |
| 22 | 22 | 0.128 |
| 23 | 23 | 0.315 |
| 24 | 24 | 0.367 |
| 25 | 25 | 0.833 |
| 26 | 26 | 0.328 |
| 27 | 27 | 0.119 |
| 28 | 28 | 0.251 |
| 29 | 29 | 0.373 |
| 3 | 3 | 0.343 |
| 30 | 30 | 0.774 |
| 31 | 31 | 0.648 |
| 32 | 32 | 0.885 |
| 33 | 33 | 0.0517 |
| 34 | 34 | 0.449 |
| 35 | 35 | 0.813 |
| 36 | 36 | 0.00265 |
| 37 | 37 | 0.0765 |
| 38 | 38 | 0.0952 |
| 39 | 39 | 0.836 |
| 4 | 4 | 0.877 |
| 40 | 40 | 0.00217 |
| 41 | 41 | 0.105 |
| 42 | 42 | 0.565 |
| 43 | 43 | 0.373 |
| 44 | 44 | 0.273 |
| 45 | 45 | 0.327 |
| 46 | 46 | 0.049 |
| 47 | 47 | 0.111 |
| 48 | 48 | 0.0552 |
| 49 | 49 | 0.433 |
| 5 | 5 | 0.259 |
| 50 | 50 | 0.721 |
| 51 | 51 | 0.245 |
| 52 | 52 | 0.673 |
| 53 | 53 | 0.885 |
| 54 | 54 | 0.569 |
| 55 | 55 | 0.594 |
| 56 | 56 | 0.621 |
| 57 | 57 | 0.111 |
| 58 | 58 | 0.788 |
| 59 | 59 | 0.0728 |
| 6 | 6 | 0.423 |
| 60 | 60 | 0.94 |
| 61 | 61 | 0.995 |
| 62 | 62 | 0.94 |
| 63 | 63 | 0.298 |
| 64 | 64 | 0.186 |
| 65 | 65 | 0.144 |
| 66 | 66 | 0.423 |
| 67 | 67 | 0.325 |
| 68 | 68 | 0.455 |
| 69 | 69 | 0.671 |
| 7 | 7 | 0.234 |
| 70 | 70 | 0.0467 |
| 71 | 71 | 0.201 |
| 72 | 72 | 0.923 |
| 73 | 73 | 0.00428 |
| 74 | 74 | 0.966 |
| 75 | 75 | 0.152 |
| 76 | 76 | 0.673 |
| 77 | 77 | 0.297 |
| 78 | 78 | 0.228 |
| 79 | 79 | 0.569 |
| 8 | 8 | 0.00739 |
| 80 | 80 | 0.705 |
| 81 | 81 | 0.981 |
| 82 | 82 | 0.322 |
| 83 | 83 | 0.841 |
| 84 | 84 | 0.115 |
| 85 | 85 | 0.206 |
| 86 | 86 | 0.926 |
| 87 | 87 | 0.0537 |
| 88 | 88 | 0.976 |
| 89 | 89 | 0.174 |
| 9 | 9 | 0.494 |
| 90 | 90 | 0.545 |
| 91 | 91 | 0.827 |
| 92 | 92 | 0.226 |
| 93 | 93 | 0.994 |
| 94 | 94 | 0.796 |
| 95 | 95 | 0.0822 |
| 96 | 96 | 0.254 |
| 97 | 97 | 0.382 |
| 98 | 98 | 0.0579 |
| 99 | 99 | 0.0152 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11376
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000050 human microvascular endothelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
0002144 (capillary endothelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0000487 (simple squamous epithelium)
0004638 (blood vessel endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0010523 (microcirculatory vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001915 (endothelium of capillary)
0004535 (cardiovascular system)
0001982 (capillary)
0004537 (blood vasculature)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000050 (human microvascular endothelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)
