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(Created page with "{{f5samples |id=FF:10032-101E5 |name=postcentral gyrus, adult, pool1 |sample_id=10032 |rna_tube_id=101E5 |rna_box=101 |rna_position=E5 |sample_cell_lot=NA |sample_cell...")
 
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{{f5samples
{{f5samples
|id=FF:10032-101E5
|DRA_sample_Accession=CAGE@SAMD00004710
|name=postcentral gyrus, adult, pool1
|accession_numbers=CAGE;DRX008712;DRR009584;DRZ001009;DRZ002394;DRZ012359;DRZ013744
|sample_id=10032
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0002581,UBERON:0001872,UBERON:0000200,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|rna_tube_id=101E5
|rna_box=101
|rna_position=E5
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Clontech
|rna_lot_number=3040377.00000
|rna_catalog_number=Cat:636573
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=44-52 years old adult
|sample_tissue=postcentral gyrus
|sample_donor(cell lot)=5 pool
|sample_sex=mixed
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=50.00000
|rna_concentration=
|sample_note=
|profile_hcage=CNhs10638,LSID657,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000200,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001872,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002581,UBERON:0002616,UBERON:0002619,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010032
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.62!415.42!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.42!259.93!OLIG1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.30!197.84!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.15!140.36!SOX10;;chr17:53342311..53342400,+!p1@HLF!2.06!130.82!HLF;;chr21:34398234..34398250,+!p1@OLIG2!2.00!100.11!OLIG2;;chr9:77112244..77112262,+!p1@RORB!1.95!98.33!RORB;;chr11:61520075..61520136,+!p1@C11orf9!1.93!172.72!C11orf9;;chr10:64134120..64134183,+!p1@ZNF365!1.87!86.62!ZNF365;;chr4:57547454..57547469,-!p1@HOPX!1.86!71.89!HOPX;;chr14:29235961..29236008,+!p1@FOXG1!1.86!70.84!FOXG1;;chr17:37764128..37764258,-!p1@NEUROD2!1.85!70.25!NEUROD2;;chr15:80733570..80733659,+!p2@ARNT2!1.82!65.18!ARNT2;;chr2:162272785..162272836,+!p1@TBR1!1.81!64.13!TBR1;;chr9:114287433..114287513,+!p1@ZNF483!1.80!157.00!ZNF483;;chr15:80735246..80735321,+!p3@ARNT2!1.76!56.96!ARNT2;;chr2:95963052..95963106,+!p1@KCNIP3!1.74!54.07!KCNIP3;;chr5:88178983..88179012,-!p1@MEF2C!1.73!383.59!MEF2C;;chr8:40755333..40755352,-!p1@ZMAT4!1.72!51.24!ZMAT4;;chr4:81118647..81118666,+!p1@PRDM8!1.70!63.73!PRDM8;;chr19:13135386..13135435,+!p4@NFIX!1.68!46.37!NFIX;;chr3:181429704..181429722,+!p1@SOX2!1.67!45.65!SOX2;;chr2:2334997..2335053,-!p1@MYT1L!1.67!45.58!MYT1L;;chr21:34442540..34442560,+!p2@OLIG1!1.65!43.21!OLIG1;;chr2:145277882..145277967,-!p3@ZEB2!1.63!70.77!ZEB2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.62!40.52!POU3F3;;chr19:13135582..13135600,+!p3@NFIX!1.61!39.53!NFIX;;chr2:166326200..166326216,+!p1@CSRNP3!1.58!52.95!CSRNP3;;chr2:60781201..60781258,-!p3@BCL11A!1.57!36.37!BCL11A;;chrX:25034067..25034088,-!p1@ARX!1.57!36.11!ARX;;chr18:53070846..53070902,-!p6@TCF4!1.55!34.40!TCF4;;chr12:26277817..26277863,-!p2@BHLHE41!1.52!42.95!BHLHE41;;chr16:1031762..1031781,+!p1@SOX8!1.50!30.39!SOX8;;chr15:80696703..80696754,+!p1@ARNT2!1.47!37.49!ARNT2;;chr14:29236269..29236285,+!p3@FOXG1!1.47!28.41!FOXG1;;chr3:181429741..181429767,+!p2@SOX2!1.46!28.08!SOX2;;chr5:88179017..88179046,-!p2@MEF2C!1.45!104.97!MEF2C;;chr8:145560371..145560449,-!p1@SCRT1!1.45!27.30!SCRT1;;chr11:125034640..125034655,+!p1@PKNOX2!1.44!26.37!PKNOX2;;chr2:95963120..95963136,+!p2@KCNIP3!1.44!26.37!KCNIP3;;chr22:41763452..41763466,+!p2@TEF!1.43!26.05!TEF;;chr10:134599649..134599653,-!p1@NKX6-2!1.43!25.85!NKX6-2;;chr8:53322304..53322340,-!p1@ST18!1.42!25.26!ST18;;chr11:113930425..113930471,+!p1@ZBTB16!1.41!35.06!ZBTB16;;chr11:8102846..8102892,+!p1@TUB!1.41!34.00!TUB;;chr4:57522166..57522260,-!p2@HOPX!1.41!28.02!HOPX;;chr19:57352109..57352153,-!p2@ZIM2!1.41!24.73!ZIM2;;chr19:38720294..38720348,-!p1@DPF1!1.40!29.93!DPF1;;chr7:31380292..31380351,-!p1@NEUROD6!1.40!24.40!NEUROD6;;chr14:29234581..29234601,+!p2@FOXG1!1.40!24.20!FOXG1;;chr12:106976774..106976788,+!p1@RFX4!1.38!23.22!RFX4;;chr12:54785074..54785122,-!p2@ZNF385A!1.37!34.00!ZNF385A;;chrY:21906594..21906622,-!p1@KDM5D!1.37!22.23!KDM5D;;chr1:151032860..151032918,+!p1@MLLT11!1.35!248.03!MLLT11;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.35!21.64!SMARCE1;;chr12:54779511..54779577,-!p5@ZNF385A!1.35!21.64!ZNF385A;;chr10:48355030..48355090,+!p1@ZNF488!1.33!26.31!ZNF488;;chr17:7492684..7492778,-!p2@SOX15!1.30!39.99!SOX15;;chr2:162272889..162272915,+!p2@TBR1!1.30!19.14!TBR1;;chr19:46801639..46801699,+!p1@HIF3A!1.30!18.94!HIF3A;;chr8:145560111..145560165,-!p2@SCRT1!1.30!18.81!SCRT1;;chr10:64133862..64133884,+!p4@ZNF365!1.29!18.55!ZNF365;;chr14:33403881..33403924,+!p1@NPAS3!1.29!18.55!NPAS3;;chr9:126774018..126774055,+!p1@LHX2!1.29!18.48!LHX2;;chr1:2461692..2461710,-!p1@HES5!1.27!17.76!HES5;;chr6:15401104..15401166,+!p5@JARID2!1.27!17.63!JARID2;;chr1:244214577..244214593,+!p1@ZNF238!1.25!16.77!ZNF238;;chr20:62680984..62680999,-!p1@SOX18!1.22!20.39!SOX18;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.22!15.79!POU3F3;;chr1:214161272..214161322,+!p1@PROX1!1.20!21.11!PROX1;;chr12:106976678..106976708,+!p2@RFX4!1.20!14.80!RFX4;;chr2:73520667..73520683,-!p1@EGR4!1.18!14.14!EGR4;;chr4:57522598..57522664,-!p3@HOPX!1.17!13.75!HOPX;;chr11:125034605..125034636,+!p2@PKNOX2!1.17!13.75!PKNOX2;;chr1:151032922..151032951,+!p2@MLLT11!1.16!22.23!MLLT11;;chr2:162272716..162272753,+!p3@TBR1!1.16!13.61!TBR1;;chr2:166428839..166428859,+!p2@CSRNP3!1.16!13.42!CSRNP3;;chr6:19837592..19837621,+!p1@ID4!1.15!78.93!ID4;;chr12:26277956..26277980,-!p1@BHLHE41!1.15!47.36!BHLHE41;;chr2:60780607..60780624,-!p2@BCL11A!1.15!40.65!BCL11A;;chr3:24536253..24536328,-!p1@THRB!1.15!24.53!THRB;;chr19:38085768..38085821,+!p1@ZNF540!1.15!19.60!ZNF540;;chrX:118739835..118739862,-!p1@NKRF!1.14!14.14!NKRF;;chr5:92920256..92920282,+!p7@NR2F1!1.13!15.26!NR2F1;;chrX:85969626..85969664,+!p1@DACH2!1.13!12.56!DACH2;;chr10:119302232..119302265,+!p1@EMX2!1.13!12.56!EMX2;;chr7:63505799..63505904,+!p1@ZNF727!1.13!12.43!ZNF727;;chr19:30863271..30863338,+!p1@ZNF536!1.13!12.37!ZNF536;;chr17:38256822..38256851,-!p1@NR1D1!1.12!96.55!NR1D1;;chr19:13134772..13134822,+!p2@NFIX!1.12!17.76!NFIX;;chr19:13135731..13135787,+!p10@NFIX!1.12!12.17!NFIX;;chr8:22550982..22550999,-!p1@EGR3!1.11!33.61!EGR3;;chr19:58545454..58545498,+!p1@ZSCAN1!1.11!11.84!ZSCAN1;;chr3:126076242..126076257,-!p1@KLF15!1.09!14.14!KLF15;;chr19:13135566..13135577,+!p9@NFIX!1.09!11.38!NFIX;;chr15:31658288..31658338,+!p4@KLF13!1.09!11.18!KLF13;;chrY:21906761..21906810,-!p2@KDM5D!1.09!11.18!KDM5D;;chr10:64133910..64133925,+!p5@ZNF365!1.07!10.85!ZNF365;;chr20:42544782..42544828,+!p4@TOX2!1.07!10.66!TOX2;;chr19:57183114..57183145,-!p1@ZNF835!1.06!11.77!ZNF835;;chr2:42721205..42721307,+!p4@MTA3!1.06!10.46!MTA3;;chr21:34442584..34442587,+!p3@OLIG1!1.05!10.33!OLIG1;;chr9:77112225..77112238,+!p2@RORB!1.05!10.26!RORB;;chr19:46800289..46800327,+!p2@HIF3A!1.05!10.13!HIF3A;;chr20:42574529..42574563,+!p3@TOX2!1.04!10.06!TOX2;;chr3:24536332..24536358,-!p2@THRB!1.04!10.00!THRB;;chr2:162273241..162273253,+!p4@TBR1!1.04!9.93!TBR1;;chr1:8585945..8586056,-!p3@RERE!1.03!32.89!RERE;;chr19:4065848..4065909,-!p4@ZBTB7A!1.03!19.34!ZBTB7A;;chr3:141105705..141105770,+!p4@ZBTB38!1.03!11.84!ZBTB38;;chr3:21792682..21792720,-!p1@ZNF385D!1.03!9.80!ZNF385D;;chr2:180726291..180726311,-!p1@ZNF385B!1.03!9.73!ZNF385B;;chr2:192015750..192015793,-!p2@STAT4!1.02!12.83!STAT4;;chr11:8102819..8102845,+!p3@TUB!1.02!11.77!TUB;;chr8:53322347..53322378,-!p2@ST18!1.02!9.54!ST18;;chr2:2335109..2335134,-!p2@MYT1L!1.02!9.41!MYT1L;;chr19:7580549..7580596,+!p3@ZNF358!1.02!9.41!ZNF358;;chr17:70117153..70117174,+!p1@SOX9!1.01!96.62!SOX9;;chr19:3359257..3359362,+!p3@NFIC!1.01!28.41!NFIC;;chr8:60031682..60031710,-!p2@TOX!1.01!15.19!TOX;;chr19:47523058..47523114,+!p1@NPAS1!1.01!9.27!NPAS1;;chr19:3359158..3359209,+!p5@NFIC!1.01!9.14!NFIC;;chr7:150974206..150974255,-!p1@SMARCD3!1.00!57.81!SMARCD3;;chr7:73038839..73038862,-!p1@MLXIPL!1.00!9.08!MLXIPL;;chr2:2335070..2335098,-!p4@MYT1L!1.00!9.08!MYT1L;;chrX:118739782..118739829,-!p2@NKRF!1.00!9.01!NKRF;;chr2:239148671..239148686,-!p1@HES6!0.99!32.62!HES6;;chr2:74229812..74229867,+!p1@TET3!0.99!22.23!TET3;;chr10:64134045..64134083,+!p3@ZNF365!0.99!8.75!ZNF365;;chr2:145275982..145276003,-!p7@ZEB2!0.99!8.68!ZEB2;;chr11:113930291..113930339,+!p2@ZBTB16!0.98!14.21!ZBTB16;;chr16:51185172..51185197,-!p1@SALL1!0.98!8.55!SALL1;;chr17:4890919..4890985,-!p1@CAMTA2!0.97!80.37!CAMTA2;;chr22:41777927..41777971,+!p1@TEF!0.97!70.97!TEF;;chr5:138609489..138609542,+!p8@MATR3!0.97!8.42!MATR3;;chr16:51185318..51185348,-!p2@SALL1!0.97!8.35!SALL1;;chr11:125034586..125034604,+!p3@PKNOX2!0.97!8.35!PKNOX2;;chr9:124991204..124991246,-!p1@LHX6!0.97!8.35!LHX6;;chr2:172949484..172949522,+!p1@DLX1!0.97!8.35!DLX1;;chr19:49140609..49140643,-!p1@DBP!0.96!47.09!DBP;;chrX:106959661..106959763,-!p4@TSC22D3!0.96!24.73!TSC22D3;;chr6:143266185..143266238,-!p2@HIVEP2!0.96!11.38!HIVEP2;;chr2:162273196..162273210,+!p5@TBR1!0.96!8.22!TBR1;;chr2:2330039..2330072,-!p6@MYT1L!0.96!8.09!MYT1L;;chr9:126773880..126773895,+!p2@LHX2!0.96!8.09!LHX2;;chr6:126112039..126112062,+!p8@NCOA7!0.95!9.73!NCOA7;;chr4:57522674..57522699,-!p5@HOPX!0.95!7.89!HOPX;;chr17:38219209..38219230,+!p1@THRA!0.94!104.58!THRA;;chr17:38256877..38256900,-!p2@NR1D1!0.94!25.85!NR1D1;;chr1:151032782..151032801,+!p4@MLLT11!0.94!15.65!MLLT11;;chr12:54785054..54785072,-!p4@ZNF385A!0.94!8.88!ZNF385A;;chr5:92919375..92919438,+!p6@NR2F1!0.94!8.35!NR2F1;;chr11:31832658..31832681,-!p1@PAX6!0.94!7.63!PAX6;;chr13:100634031..100634045,+!p1@ZIC2!0.94!7.63!ZIC2;;chr2:180726331..180726344,-!p5@ZNF385B!0.93!7.56!ZNF385B;;chr2:166428861..166428883,+!p3@CSRNP3!0.93!7.50!CSRNP3;;chr12:103351444..103351461,+!p1@ASCL1!0.93!7.50!ASCL1;;chr1:151032833..151032850,+!p3@MLLT11!0.92!17.04!MLLT11;;chr3:52001396..52001425,-!p4@PCBP4!0.92!13.29!PCBP4;;chr3:33482052..33482116,-!p2@UBP1!0.92!11.58!UBP1;;chr18:53068911..53068935,-!p4@TCF4!0.92!8.35!TCF4;;chr15:31631789..31631811,+!p13@KLF13!0.92!7.37!KLF13;;chr16:85932760..85932775,+!p1@IRF8!0.92!7.37!IRF8;;chr8:22550530..22550609,-!p2@EGR3!0.92!7.30!EGR3;;chr11:8040739..8040815,+!p4@TUB!0.92!7.30!TUB;;chr2:162273101..162273118,+!p7@TBR1!0.92!7.30!TBR1;;chr2:2328725..2328739,-!p5@MYT1L!0.92!7.30!MYT1L;;chr13:45010939..45011033,-!p1@TSC22D1!0.91!494.68!TSC22D1;;chr1:151032739..151032748,+!p6@MLLT11!0.91!9.01!MLLT11;;chr14:75894391..75894435,+!p2@JDP2!0.91!8.16!JDP2;;chrX:102000987..102001029,+!p3@BHLHB9!0.91!7.04!BHLHB9;;chr15:80696410..80696477,+!p6@ARNT2!0.90!6.91!ARNT2;;chr14:21994337..21994442,-!p1@SALL2!0.89!19.47!SALL2;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.89!14.86!ZNF395;;chr5:88179230..88179270,-!p4@MEF2C!0.89!13.48!MEF2C;;chr12:56583371..56583394,-!p2@SMARCC2!0.89!10.66!SMARCC2;;chr12:24102576..24102623,-!p2@SOX5!0.89!6.77!SOX5;;chr8:30890810..30890880,-!p1@PURG!0.89!6.77!PURG;;chr2:172950227..172950249,+!p2@DLX1!0.89!6.77!DLX1;;chr2:162273254..162273267,+!p6@TBR1!0.89!6.71!TBR1;;chr3:141105235..141105307,+!p7@ZBTB38!0.89!6.71!ZBTB38;;chr15:80696666..80696700,+!p4@ARNT2!0.89!6.71!ARNT2;;chr17:46131916..46131952,+!p7@NFE2L1!0.89!6.71!NFE2L1;;chr3:18466787..18466839,-!p1@SATB1!0.88!31.18!SATB1;;chr15:31618903..31618962,+!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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000200;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001872;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/postcentral%2520gyrus%252c%2520adult%252c%2520pool1.CNhs10638.10032-101E5.hg19.nobarcode.rdna.fa.gz
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|id=FF:10032-101E5
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|is_obsolete=
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|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10032
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10032
|name=postcentral gyrus, adult, pool1
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|rna_box=101
|rna_catalog_number=Cat:636573
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=3040377
|rna_od260/230=
|rna_od260/280=
|rna_position=E5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.01E+07
|rna_weight_ug=50
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Clontech
|sample_description=
|sample_dev_stage=44-52 years old adult
|sample_disease=normal
|sample_donor(cell lot)=5 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.49561897359507e-294!GO:0005737;cytoplasm;1.2023019002573e-164!GO:0044444;cytoplasmic part;4.58110591370954e-111!GO:0043226;organelle;1.11481576487227e-89!GO:0043229;intracellular organelle;3.44980695683758e-89!GO:0043227;membrane-bound organelle;5.29366618083291e-83!GO:0043231;intracellular membrane-bound organelle;7.06530144306038e-83!GO:0044422;organelle part;2.20310727160533e-65!GO:0044446;intracellular organelle part;2.17748364608192e-64!GO:0005515;protein binding;4.86252425769868e-62!GO:0032991;macromolecular complex;4.28318872764961e-58!GO:0005739;mitochondrion;3.06168107588103e-46!GO:0016043;cellular component organization and biogenesis;3.43913090628958e-43!GO:0031090;organelle membrane;1.50241245818305e-42!GO:0033036;macromolecule localization;5.60575986742238e-39!GO:0030529;ribonucleoprotein complex;7.04167804682316e-39!GO:0015031;protein transport;7.04167804682316e-39!GO:0008104;protein localization;6.3097054144469e-36!GO:0003723;RNA binding;3.49864586961945e-35!GO:0045184;establishment of protein localization;4.09135315507369e-35!GO:0044429;mitochondrial part;4.09135315507369e-35!GO:0043234;protein complex;8.38503840894303e-33!GO:0046907;intracellular transport;6.69627621324617e-30!GO:0031975;envelope;9.13626194118517e-29!GO:0031967;organelle envelope;1.37809002933819e-28!GO:0043233;organelle lumen;2.23960898435864e-28!GO:0031974;membrane-enclosed lumen;2.23960898435864e-28!GO:0051649;establishment of cellular localization;6.15946392533871e-28!GO:0051641;cellular localization;7.38256832227335e-28!GO:0016192;vesicle-mediated transport;9.53365577934434e-27!GO:0019538;protein metabolic process;8.2975835753049e-25!GO:0044428;nuclear part;8.52413286621598e-25!GO:0005740;mitochondrial envelope;1.80387949489077e-24!GO:0031966;mitochondrial membrane;6.36855931129646e-24!GO:0005840;ribosome;1.4705452818001e-23!GO:0005829;cytosol;2.20615658748447e-23!GO:0006119;oxidative phosphorylation;2.58499120485828e-22!GO:0006886;intracellular protein transport;4.29221791071421e-22!GO:0044260;cellular macromolecule metabolic process;7.47842581616278e-22!GO:0044267;cellular protein metabolic process;3.08845489772222e-21!GO:0016071;mRNA metabolic process;4.11654657429841e-21!GO:0019866;organelle inner membrane;4.11654657429841e-21!GO:0044238;primary metabolic process;6.6817986502855e-21!GO:0005794;Golgi apparatus;1.00736755909059e-20!GO:0006396;RNA processing;1.19111614802047e-20!GO:0005743;mitochondrial inner membrane;1.29455491557392e-20!GO:0031982;vesicle;6.50712694218944e-20!GO:0044237;cellular metabolic process;1.55006470464051e-19!GO:0031988;membrane-bound vesicle;2.18206885588822e-19!GO:0008380;RNA splicing;3.16306149714885e-19!GO:0031410;cytoplasmic vesicle;3.16306149714885e-19!GO:0003735;structural constituent of ribosome;4.86813911708185e-19!GO:0016023;cytoplasmic membrane-bound vesicle;8.02514467377624e-19!GO:0006996;organelle organization and biogenesis;3.49386386003307e-18!GO:0006397;mRNA processing;7.2729639160935e-18!GO:0043170;macromolecule metabolic process;7.88826569924234e-18!GO:0006412;translation;1.75460404965024e-17!GO:0009058;biosynthetic process;2.39581043823187e-17!GO:0044455;mitochondrial membrane part;6.87483385471356e-17!GO:0005746;mitochondrial respiratory chain;2.3372902246387e-16!GO:0065003;macromolecular complex assembly;4.06910792277978e-16!GO:0012505;endomembrane system;5.44562283738851e-16!GO:0000166;nucleotide binding;6.99100380239344e-16!GO:0006512;ubiquitin cycle;7.88234624379006e-16!GO:0033279;ribosomal subunit;1.67782256356597e-15!GO:0022607;cellular component assembly;1.20095206627308e-14!GO:0043412;biopolymer modification;1.71052092603724e-14!GO:0031981;nuclear lumen;1.89651724927209e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.95427081244884e-14!GO:0003954;NADH dehydrogenase activity;1.95427081244884e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.95427081244884e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.2380155129402e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;2.65375984278876e-14!GO:0016462;pyrophosphatase activity;3.0721537559244e-14!GO:0044249;cellular biosynthetic process;4.91849928148619e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.13884734330847e-14!GO:0006464;protein modification process;6.41516916463419e-14!GO:0016874;ligase activity;8.61976044146575e-14!GO:0005634;nucleus;1.00598953231008e-13!GO:0006810;transport;1.23487975132221e-13!GO:0043687;post-translational protein modification;1.52959951054743e-13!GO:0017111;nucleoside-triphosphatase activity;1.8468842783871e-13!GO:0009059;macromolecule biosynthetic process;2.22591426586543e-13!GO:0005681;spliceosome;3.43611917103162e-13!GO:0031980;mitochondrial lumen;3.46765177940872e-13!GO:0005759;mitochondrial matrix;3.46765177940872e-13!GO:0045045;secretory pathway;4.52933322659682e-13!GO:0007264;small GTPase mediated signal transduction;6.04145744325419e-13!GO:0048770;pigment granule;9.73405527449803e-13!GO:0042470;melanosome;9.73405527449803e-13!GO:0030135;coated vesicle;1.17640062886291e-12!GO:0032553;ribonucleotide binding;1.22463692142309e-12!GO:0032555;purine ribonucleotide binding;1.22463692142309e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.29020627060742e-12!GO:0045271;respiratory chain complex I;1.29020627060742e-12!GO:0005747;mitochondrial respiratory chain complex I;1.29020627060742e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.65679463424455e-12!GO:0042773;ATP synthesis coupled electron transport;1.65679463424455e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.50828053294169e-12!GO:0006457;protein folding;5.45828783395371e-12!GO:0017076;purine nucleotide binding;9.41173081885572e-12!GO:0048193;Golgi vesicle transport;1.72115293242246e-11!GO:0008092;cytoskeletal protein binding;1.75330340435591e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.78654346047734e-11!GO:0019829;cation-transporting ATPase activity;2.58410266385179e-11!GO:0007399;nervous system development;2.83686379545055e-11!GO:0044445;cytosolic part;5.36234760614097e-11!GO:0051234;establishment of localization;7.7645624963596e-11!GO:0043005;neuron projection;8.49610809005439e-11!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.31110602097382e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.11771919630767e-10!GO:0044431;Golgi apparatus part;1.55076710085695e-10!GO:0005783;endoplasmic reticulum;1.89669893836113e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.93775242488524e-10!GO:0051179;localization;2.21379927720831e-10!GO:0005768;endosome;4.8357206928534e-10!GO:0003924;GTPase activity;4.84355144343382e-10!GO:0022618;protein-RNA complex assembly;5.03649182310922e-10!GO:0030695;GTPase regulator activity;8.43887222790639e-10!GO:0051082;unfolded protein binding;8.9531455049361e-10!GO:0008135;translation factor activity, nucleic acid binding;1.09817541944018e-09!GO:0006793;phosphorus metabolic process;1.24210015870365e-09!GO:0006796;phosphate metabolic process;1.24210015870365e-09!GO:0051186;cofactor metabolic process;1.44222546208799e-09!GO:0005083;small GTPase regulator activity;1.6594203007762e-09!GO:0043283;biopolymer metabolic process;2.11020489460736e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.42456394329995e-09!GO:0015935;small ribosomal subunit;2.44215517218401e-09!GO:0006605;protein targeting;2.51233821564884e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;3.04554825661792e-09!GO:0008639;small protein conjugating enzyme activity;3.07507328764252e-09!GO:0030136;clathrin-coated vesicle;3.20594789531055e-09!GO:0006511;ubiquitin-dependent protein catabolic process;3.87539567033865e-09!GO:0000502;proteasome complex (sensu Eukaryota);4.04823264090412e-09!GO:0005654;nucleoplasm;4.05048446221017e-09!GO:0005525;GTP binding;4.29671818026566e-09!GO:0019941;modification-dependent protein catabolic process;4.80860303634356e-09!GO:0043632;modification-dependent macromolecule catabolic process;4.80860303634356e-09!GO:0015986;ATP synthesis coupled proton transport;4.82393476014724e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.82393476014724e-09!GO:0019787;small conjugating protein ligase activity;5.41498296075326e-09!GO:0004842;ubiquitin-protein ligase activity;6.3005605064116e-09!GO:0043228;non-membrane-bound organelle;6.3005605064116e-09!GO:0043232;intracellular non-membrane-bound organelle;6.3005605064116e-09!GO:0008565;protein transporter activity;6.442902723051e-09!GO:0044257;cellular protein catabolic process;6.44933958741532e-09!GO:0044265;cellular macromolecule catabolic process;8.85147088150582e-09!GO:0032940;secretion by cell;1.34874788437193e-08!GO:0044451;nucleoplasm part;2.04615714635086e-08!GO:0007010;cytoskeleton organization and biogenesis;2.12688467011831e-08!GO:0016044;membrane organization and biogenesis;2.1282321135917e-08!GO:0008134;transcription factor binding;2.62843189571547e-08!GO:0044248;cellular catabolic process;3.26882535348266e-08!GO:0000139;Golgi membrane;3.96540781503095e-08!GO:0046034;ATP metabolic process;7.31601885179325e-08!GO:0016881;acid-amino acid ligase activity;8.2206214990628e-08!GO:0009060;aerobic respiration;1.02597288016506e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.23086748602517e-07!GO:0030163;protein catabolic process;1.51323247075013e-07!GO:0032561;guanyl ribonucleotide binding;1.53515050428433e-07!GO:0019001;guanyl nucleotide binding;1.53515050428433e-07!GO:0043285;biopolymer catabolic process;1.67662511651256e-07!GO:0045333;cellular respiration;1.9441876743535e-07!GO:0015631;tubulin binding;2.01799530648376e-07!GO:0005761;mitochondrial ribosome;2.0671703616062e-07!GO:0000313;organellar ribosome;2.0671703616062e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.26440653099828e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.37360918219843e-07!GO:0006163;purine nucleotide metabolic process;2.45932927581802e-07!GO:0009141;nucleoside triphosphate metabolic process;2.58342051546965e-07!GO:0006754;ATP biosynthetic process;2.64915493323356e-07!GO:0006753;nucleoside phosphate metabolic process;2.64915493323356e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.7689907368575e-07!GO:0006461;protein complex assembly;2.7689907368575e-07!GO:0032559;adenyl ribonucleotide binding;2.82392804130155e-07!GO:0006732;coenzyme metabolic process;2.94693825801695e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.53576468346119e-07!GO:0009150;purine ribonucleotide metabolic process;3.53576468346119e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.65487862196621e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.65487862196621e-07!GO:0015934;large ribosomal subunit;3.65487862196621e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.23783013936583e-07!GO:0048475;coated membrane;5.0340012061154e-07!GO:0030117;membrane coat;5.0340012061154e-07!GO:0048471;perinuclear region of cytoplasm;5.11104651439346e-07!GO:0044440;endosomal part;5.52938132146293e-07!GO:0010008;endosome membrane;5.52938132146293e-07!GO:0006164;purine nucleotide biosynthetic process;5.80669673541152e-07!GO:0030036;actin cytoskeleton organization and biogenesis;5.80669673541152e-07!GO:0009057;macromolecule catabolic process;6.28957610186616e-07!GO:0009259;ribonucleotide metabolic process;6.85963733437354e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;6.98259056605181e-07!GO:0000375;RNA splicing, via transesterification reactions;6.98259056605181e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.98259056605181e-07!GO:0016310;phosphorylation;7.65917379495179e-07!GO:0009152;purine ribonucleotide biosynthetic process;8.08583956713316e-07!GO:0003743;translation initiation factor activity;8.40690177482726e-07!GO:0019717;synaptosome;9.03408258589856e-07!GO:0005524;ATP binding;9.90079568536631e-07!GO:0044432;endoplasmic reticulum part;1.00827566691955e-06!GO:0006413;translational initiation;1.03670434835268e-06!GO:0006446;regulation of translational initiation;1.16375992839529e-06!GO:0008287;protein serine/threonine phosphatase complex;1.39143857395532e-06!GO:0007242;intracellular signaling cascade;1.525007926825e-06!GO:0030554;adenyl nucleotide binding;1.56577211708858e-06!GO:0005905;coated pit;1.57465785775958e-06!GO:0019226;transmission of nerve impulse;1.75037336409013e-06!GO:0009055;electron carrier activity;1.83972864053312e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.84824817505989e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.84824817505989e-06!GO:0030425;dendrite;1.91754191312995e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.1719922176485e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.1719922176485e-06!GO:0030029;actin filament-based process;2.72897852584797e-06!GO:0009260;ribonucleotide biosynthetic process;2.9066610681715e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.42077139328812e-06!GO:0006099;tricarboxylic acid cycle;3.60034026261978e-06!GO:0046356;acetyl-CoA catabolic process;3.60034026261978e-06!GO:0006913;nucleocytoplasmic transport;3.7229596925373e-06!GO:0031965;nuclear membrane;4.36851530759065e-06!GO:0008021;synaptic vesicle;4.44182990256351e-06!GO:0051169;nuclear transport;5.40058786261567e-06!GO:0022890;inorganic cation transmembrane transporter activity;5.47454882376649e-06!GO:0016604;nuclear body;5.62926770208523e-06!GO:0007265;Ras protein signal transduction;5.82468411256682e-06!GO:0005770;late endosome;6.33496042344446e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.87764256239091e-06!GO:0003779;actin binding;8.72897276804757e-06!GO:0045259;proton-transporting ATP synthase complex;9.15962270921403e-06!GO:0016607;nuclear speck;9.72242105989919e-06!GO:0009109;coenzyme catabolic process;1.02304969609145e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.07434993422027e-05!GO:0006084;acetyl-CoA metabolic process;1.07757699434759e-05!GO:0051056;regulation of small GTPase mediated signal transduction;1.07757699434759e-05!GO:0005635;nuclear envelope;1.08852471771792e-05!GO:0005789;endoplasmic reticulum membrane;1.08852471771792e-05!GO:0005798;Golgi-associated vesicle;1.14473130065399e-05!GO:0010467;gene expression;1.32677043594404e-05!GO:0042623;ATPase activity, coupled;1.54375527000895e-05!GO:0019899;enzyme binding;1.78227802675916e-05!GO:0015630;microtubule cytoskeleton;1.84789193135523e-05!GO:0030120;vesicle coat;1.9377428964951e-05!GO:0030662;coated vesicle membrane;1.9377428964951e-05!GO:0005769;early endosome;2.59922217148827e-05!GO:0032446;protein modification by small protein conjugation;2.65570449748101e-05!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.90901669901974e-05!GO:0006897;endocytosis;2.93452323214085e-05!GO:0010324;membrane invagination;2.93452323214085e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.04123966625268e-05!GO:0015399;primary active transmembrane transporter activity;3.04123966625268e-05!GO:0008654;phospholipid biosynthetic process;3.04440950483925e-05!GO:0005874;microtubule;3.08260826276801e-05!GO:0016567;protein ubiquitination;3.09714434045378e-05!GO:0016887;ATPase activity;3.20231315969926e-05!GO:0005730;nucleolus;4.10896680691061e-05!GO:0031252;leading edge;4.13720393894944e-05!GO:0051187;cofactor catabolic process;4.353640596151e-05!GO:0046467;membrane lipid biosynthetic process;6.92732069205174e-05!GO:0005773;vacuole;6.96951699693096e-05!GO:0003712;transcription cofactor activity;8.56865779105206e-05!GO:0043492;ATPase activity, coupled to movement of substances;9.00295384599983e-05!GO:0009056;catabolic process;9.68899084796945e-05!GO:0017038;protein import;0.000111516875351984!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000111538549550121!GO:0007268;synaptic transmission;0.000117662144054573!GO:0051128;regulation of cellular component organization and biogenesis;0.000131208319574439!GO:0008017;microtubule binding;0.000138156051597028!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000142054382957096!GO:0008047;enzyme activator activity;0.000145802830120695!GO:0006650;glycerophospholipid metabolic process;0.00016009648209408!GO:0051188;cofactor biosynthetic process;0.000160597992321396!GO:0030133;transport vesicle;0.000161571269577219!GO:0016311;dephosphorylation;0.000200283775514627!GO:0006888;ER to Golgi vesicle-mediated transport;0.000210608891338928!GO:0030118;clathrin coat;0.000216845847460048!GO:0048489;synaptic vesicle transport;0.000221532720394304!GO:0005096;GTPase activator activity;0.00025219385257614!GO:0016301;kinase activity;0.000267617228006875!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000287425790659372!GO:0006752;group transfer coenzyme metabolic process;0.000289259275617877!GO:0005085;guanyl-nucleotide exchange factor activity;0.000295362675160147!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000304066105369905!GO:0004721;phosphoprotein phosphatase activity;0.000318851002166726!GO:0007269;neurotransmitter secretion;0.000328880367860211!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000331562956022474!GO:0006643;membrane lipid metabolic process;0.000334800223657141!GO:0046578;regulation of Ras protein signal transduction;0.000354990546136244!GO:0016740;transferase activity;0.000383697727318837!GO:0005741;mitochondrial outer membrane;0.000383697727318837!GO:0005793;ER-Golgi intermediate compartment;0.000391403768095053!GO:0015980;energy derivation by oxidation of organic compounds;0.00041901932705884!GO:0006613;cotranslational protein targeting to membrane;0.000425953499093601!GO:0007019;microtubule depolymerization;0.000477272535243089!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000488215393160895!GO:0000151;ubiquitin ligase complex;0.000511990776487706!GO:0000245;spliceosome assembly;0.00052341161178565!GO:0044453;nuclear membrane part;0.000556122120974629!GO:0005643;nuclear pore;0.000572912723316499!GO:0016791;phosphoric monoester hydrolase activity;0.00058084074151179!GO:0006403;RNA localization;0.000591615114878736!GO:0000902;cell morphogenesis;0.000592776419711773!GO:0032989;cellular structure morphogenesis;0.000592776419711773!GO:0051246;regulation of protein metabolic process;0.000640084655180909!GO:0006470;protein amino acid dephosphorylation;0.000650823918460827!GO:0050657;nucleic acid transport;0.000717707790217397!GO:0051236;establishment of RNA localization;0.000717707790217397!GO:0050658;RNA transport;0.000717707790217397!GO:0019902;phosphatase binding;0.000735674206438318!GO:0030384;phosphoinositide metabolic process;0.00083659870436288!GO:0045055;regulated secretory pathway;0.000859989889113384!GO:0000323;lytic vacuole;0.000865884751050981!GO:0005764;lysosome;0.000865884751050981!GO:0030027;lamellipodium;0.000910646091434362!GO:0019867;outer membrane;0.000943402064693277!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000977288703396838!GO:0019208;phosphatase regulator activity;0.000977288703396838!GO:0031968;organelle outer membrane;0.000988336737838483!GO:0016568;chromatin modification;0.00100004323712152!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00102316832366425!GO:0009108;coenzyme biosynthetic process;0.00104942757527813!GO:0031902;late endosome membrane;0.00110348654470466!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00115205586674293!GO:0016197;endosome transport;0.00115841842223178!GO:0000159;protein phosphatase type 2A complex;0.00120016504570507!GO:0030427;site of polarized growth;0.00122123551341796!GO:0050767;regulation of neurogenesis;0.0012398003856587!GO:0030424;axon;0.00126106413232843!GO:0030426;growth cone;0.00126445616817008!GO:0045786;negative regulation of progression through cell cycle;0.00129755466749488!GO:0001505;regulation of neurotransmitter levels;0.00130631560902254!GO:0005516;calmodulin binding;0.00133226376177406!GO:0005774;vacuolar membrane;0.00135362435393506!GO:0004722;protein serine/threonine phosphatase activity;0.00135362435393506!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00140844601987694!GO:0048523;negative regulation of cellular process;0.00156737342366709!GO:0008601;protein phosphatase type 2A regulator activity;0.00160079769401876!GO:0031114;regulation of microtubule depolymerization;0.00162927427161776!GO:0007026;negative regulation of microtubule depolymerization;0.00162927427161776!GO:0031072;heat shock protein binding;0.00167989257395265!GO:0005938;cell cortex;0.00170982456148698!GO:0009117;nucleotide metabolic process;0.00172701499040052!GO:0046488;phosphatidylinositol metabolic process;0.00173186609918355!GO:0006323;DNA packaging;0.00177339424200186!GO:0048487;beta-tubulin binding;0.00178395496908762!GO:0003729;mRNA binding;0.00180537417369805!GO:0005869;dynactin complex;0.00181728925710019!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00185413819546981!GO:0004812;aminoacyl-tRNA ligase activity;0.00185413819546981!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00185413819546981!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00185413819546981!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00185413819546981!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00185413819546981!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00186194093579738!GO:0012506;vesicle membrane;0.00206885117167406!GO:0030054;cell junction;0.00217311563968841!GO:0004674;protein serine/threonine kinase activity;0.00218925809383499!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00222691664549864!GO:0051087;chaperone binding;0.00229384989675365!GO:0007266;Rho protein signal transduction;0.00245263564257095!GO:0043623;cellular protein complex assembly;0.00253924772743615!GO:0016126;sterol biosynthetic process;0.00268321377300594!GO:0003724;RNA helicase activity;0.00271861085742894!GO:0065002;intracellular protein transport across a membrane;0.00284654201807921!GO:0003697;single-stranded DNA binding;0.00286484171139899!GO:0019888;protein phosphatase regulator activity;0.00287238724417794!GO:0048699;generation of neurons;0.00296323607076795!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00311962639124027!GO:0030532;small nuclear ribonucleoprotein complex;0.00313194938704338!GO:0043038;amino acid activation;0.00315580120401343!GO:0006418;tRNA aminoacylation for protein translation;0.00315580120401343!GO:0043039;tRNA aminoacylation;0.00315580120401343!GO:0008026;ATP-dependent helicase activity;0.00317639472458196!GO:0008610;lipid biosynthetic process;0.00321088466767439!GO:0048167;regulation of synaptic plasticity;0.00324967009992271!GO:0046474;glycerophospholipid biosynthetic process;0.00332228884663315!GO:0006891;intra-Golgi vesicle-mediated transport;0.00344150761441028!GO:0007272;ensheathment of neurons;0.00344150761441028!GO:0008366;axon ensheathment;0.00344150761441028!GO:0051427;hormone receptor binding;0.00359649059045386!GO:0022008;neurogenesis;0.00359663224318479!GO:0006414;translational elongation;0.00382846625934659!GO:0043209;myelin sheath;0.00390102447340825!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00390102447340825!GO:0055083;monovalent inorganic anion homeostasis;0.00390102447340825!GO:0055064;chloride ion homeostasis;0.00390102447340825!GO:0030644;cellular chloride ion homeostasis;0.00390102447340825!GO:0044433;cytoplasmic vesicle part;0.00392571114287268!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00396904316713902!GO:0032011;ARF protein signal transduction;0.00410581550868829!GO:0032012;regulation of ARF protein signal transduction;0.00410581550868829!GO:0005048;signal sequence binding;0.00410581550868829!GO:0016050;vesicle organization and biogenesis;0.00418071786995188!GO:0003714;transcription corepressor activity;0.00420928462173798!GO:0016564;transcription repressor activity;0.00421206045702534!GO:0030660;Golgi-associated vesicle membrane;0.00437397134081474!GO:0009966;regulation of signal transduction;0.00439938212467808!GO:0005765;lysosomal membrane;0.00442855654538923!GO:0005839;proteasome core complex (sensu Eukaryota);0.00448125957904048!GO:0006644;phospholipid metabolic process;0.00465262111801469!GO:0006665;sphingolipid metabolic process;0.00487916399811773!GO:0008154;actin polymerization and/or depolymerization;0.00501557871140223!GO:0030182;neuron differentiation;0.0050983641933898!GO:0006606;protein import into nucleus;0.00514764171752427!GO:0006892;post-Golgi vesicle-mediated transport;0.00522726603606518!GO:0003746;translation elongation factor activity;0.00533684318075086!GO:0043566;structure-specific DNA binding;0.00537673555538754!GO:0051168;nuclear export;0.00542331268141006!GO:0051170;nuclear import;0.00546793220320213!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00546793220320213!GO:0004667;prostaglandin-D synthase activity;0.00546793220320213!GO:0050802;circadian sleep/wake cycle, sleep;0.00546793220320213!GO:0022410;circadian sleep/wake cycle process;0.00546793220320213!GO:0042749;regulation of circadian sleep/wake cycle;0.00546793220320213!GO:0044437;vacuolar part;0.00546793220320213!GO:0005875;microtubule associated complex;0.00558924133330023!GO:0006904;vesicle docking during exocytosis;0.00563583098795325!GO:0006612;protein targeting to membrane;0.00572922010529965!GO:0001508;regulation of action potential;0.00603823113795475!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0060805282723768!GO:0019903;protein phosphatase binding;0.00615057986568481!GO:0035257;nuclear hormone receptor binding;0.00617991652924269!GO:0022406;membrane docking;0.00626152676569751!GO:0048278;vesicle docking;0.00626152676569751!GO:0051261;protein depolymerization;0.00628865684549003!GO:0015629;actin cytoskeleton;0.00649985231068199!GO:0051028;mRNA transport;0.0065382834877446!GO:0031901;early endosome membrane;0.00667461712338691!GO:0050811;GABA receptor binding;0.00672036372432462!GO:0030658;transport vesicle membrane;0.00681670718971936!GO:0050803;regulation of synapse structure and activity;0.0068619163633637!GO:0042578;phosphoric ester hydrolase activity;0.0068619163633637!GO:0051920;peroxiredoxin activity;0.00714725964619396!GO:0030867;rough endoplasmic reticulum membrane;0.00722465756566728!GO:0000314;organellar small ribosomal subunit;0.0073344152961916!GO:0005763;mitochondrial small ribosomal subunit;0.0073344152961916!GO:0030132;clathrin coat of coated pit;0.00787089616253841!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00793145697609298!GO:0019198;transmembrane receptor protein phosphatase activity;0.00793145697609298!GO:0051540;metal cluster binding;0.00825070521981545!GO:0051536;iron-sulfur cluster binding;0.00825070521981545!GO:0048519;negative regulation of biological process;0.00856044647856649!GO:0006818;hydrogen transport;0.00861484263634522!GO:0006695;cholesterol biosynthetic process;0.00865241190195618!GO:0042254;ribosome biogenesis and assembly;0.00923011366212248!GO:0043021;ribonucleoprotein binding;0.00950820515706548!GO:0044448;cell cortex part;0.00982844505218599!GO:0044456;synapse part;0.0100317976889192!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0104033239448005!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0106732861995447!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0106732861995447!GO:0009165;nucleotide biosynthetic process;0.0109493027088715!GO:0030659;cytoplasmic vesicle membrane;0.0109676205199161!GO:0005791;rough endoplasmic reticulum;0.0109676205199161!GO:0050839;cell adhesion molecule binding;0.0111389971870947!GO:0000287;magnesium ion binding;0.0111649660752929!GO:0001578;microtubule bundle formation;0.0111649660752929!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0119803471750736!GO:0043087;regulation of GTPase activity;0.0119803471750736!GO:0005092;GDP-dissociation inhibitor activity;0.0120595565549049!GO:0048666;neuron development;0.0124560024792276!GO:0015992;proton transport;0.0125640548631127!GO:0007017;microtubule-based process;0.0125976865858134!GO:0031109;microtubule polymerization or depolymerization;0.0131500187587475!GO:0004386;helicase activity;0.0131703577597508!GO:0030125;clathrin vesicle coat;0.0133054436444602!GO:0030665;clathrin coated vesicle membrane;0.0133054436444602!GO:0008186;RNA-dependent ATPase activity;0.0133217536948921!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0134966321745546!GO:0008250;oligosaccharyl transferase complex;0.0136814250514792!GO:0004298;threonine endopeptidase activity;0.0138435539710977!GO:0003713;transcription coactivator activity;0.0138641539076137!GO:0030137;COPI-coated vesicle;0.0138641539076137!GO:0004683;calmodulin-dependent protein kinase activity;0.0139211259554295!GO:0005762;mitochondrial large ribosomal subunit;0.0143274445964731!GO:0000315;organellar large ribosomal subunit;0.0143274445964731!GO:0000904;cellular morphogenesis during differentiation;0.0143526253403826!GO:0046489;phosphoinositide biosynthetic process;0.0147827250296225!GO:0019887;protein kinase regulator activity;0.0152905967299343!GO:0006607;NLS-bearing substrate import into nucleus;0.015694213713693!GO:0005099;Ras GTPase activator activity;0.0163978124199662!GO:0048667;neuron morphogenesis during differentiation;0.0165859454721905!GO:0048812;neurite morphogenesis;0.0165859454721905!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.016773984989009!GO:0043681;protein import into mitochondrion;0.0167911897191628!GO:0035258;steroid hormone receptor binding;0.0169092822791282!GO:0030742;GTP-dependent protein binding;0.0176374189836659!GO:0048500;signal recognition particle;0.0180036439040763!GO:0030258;lipid modification;0.0180336416777943!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0187117484123465!GO:0006672;ceramide metabolic process;0.018813940130245!GO:0019894;kinesin binding;0.0189021006242247!GO:0030041;actin filament polymerization;0.019229011110306!GO:0035035;histone acetyltransferase binding;0.0193421393050388!GO:0043025;cell soma;0.0200695087590075!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0205449319984637!GO:0019904;protein domain specific binding;0.0205579146457251!GO:0030030;cell projection organization and biogenesis;0.0213380053434925!GO:0048858;cell projection morphogenesis;0.0213380053434925!GO:0032990;cell part morphogenesis;0.0213380053434925!GO:0031175;neurite development;0.0214928902881615!GO:0046519;sphingoid metabolic process;0.0215725840627653!GO:0031301;integral to organelle membrane;0.0219018750119476!GO:0008139;nuclear localization sequence binding;0.0219018750119476!GO:0006595;polyamine metabolic process;0.022852681485801!GO:0033673;negative regulation of kinase activity;0.023195831015909!GO:0006469;negative regulation of protein kinase activity;0.023195831015909!GO:0046930;pore complex;0.023227846271154!GO:0008180;signalosome;0.0232479360434878!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0232510968489017!GO:0030119;AP-type membrane coat adaptor complex;0.0232660520540311!GO:0031124;mRNA 3'-end processing;0.0242625047230142!GO:0043407;negative regulation of MAP kinase activity;0.0246118522369324!GO:0007005;mitochondrion organization and biogenesis;0.0252918281833589!GO:0007034;vacuolar transport;0.0262064183315063!GO:0006916;anti-apoptosis;0.0263005694068191!GO:0030131;clathrin adaptor complex;0.0265357907397663!GO:0051287;NAD binding;0.0265789839681685!GO:0005885;Arp2/3 protein complex;0.0270456706289624!GO:0006661;phosphatidylinositol biosynthetic process;0.0270976328318806!GO:0005868;cytoplasmic dynein complex;0.0274145212485054!GO:0006402;mRNA catabolic process;0.0275679139412254!GO:0042552;myelination;0.0275679139412254!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0276792331667082!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0276792331667082!GO:0015002;heme-copper terminal oxidase activity;0.0276792331667082!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0276792331667082!GO:0004129;cytochrome-c oxidase activity;0.0276792331667082!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0276792331667082!GO:0051539;4 iron, 4 sulfur cluster binding;0.0277022199840581!GO:0042995;cell projection;0.0295591040499139!GO:0006399;tRNA metabolic process;0.0296354047472651!GO:0004004;ATP-dependent RNA helicase activity;0.0301713424786186!GO:0000062;acyl-CoA binding;0.0301846018921645!GO:0006887;exocytosis;0.0302076242835916!GO:0031371;ubiquitin conjugating enzyme complex;0.0306805944637855!GO:0007611;learning and/or memory;0.0306805944637855!GO:0043284;biopolymer biosynthetic process;0.0308691254963789!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0311411849926294!GO:0019207;kinase regulator activity;0.0314890448383952!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0314890448383952!GO:0045296;cadherin binding;0.0318270379422518!GO:0006259;DNA metabolic process;0.0321605924832!GO:0008286;insulin receptor signaling pathway;0.0324935743970788!GO:0042670;retinal cone cell differentiation;0.0327519167018768!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0327519167018768!GO:0046549;retinal cone cell development;0.0327519167018768!GO:0008088;axon cargo transport;0.0332751478696404!GO:0001726;ruffle;0.0333209162867505!GO:0006611;protein export from nucleus;0.0341878739546647!GO:0019911;structural constituent of myelin sheath;0.0343541395993257!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0345386093313897!GO:0016079;synaptic vesicle exocytosis;0.0351092001148613!GO:0051348;negative regulation of transferase activity;0.035145528559021!GO:0004680;casein kinase activity;0.0351496925657378!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0351765472845422!GO:0000096;sulfur amino acid metabolic process;0.0358276488980078!GO:0050435;beta-amyloid metabolic process;0.0363680025970808!GO:0016579;protein deubiquitination;0.0363964367502484!GO:0006091;generation of precursor metabolites and energy;0.0375707049078905!GO:0006364;rRNA processing;0.0375707049078905!GO:0033116;ER-Golgi intermediate compartment membrane;0.0380719061008783!GO:0046839;phospholipid dephosphorylation;0.0383474650380931!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.038367688705419!GO:0006333;chromatin assembly or disassembly;0.0384182242294262!GO:0008526;phosphatidylinositol transporter activity;0.0387181255947027!GO:0004576;oligosaccharyl transferase activity;0.0387181255947027!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0389118597186891!GO:0045047;protein targeting to ER;0.0389118597186891!GO:0030176;integral to endoplasmic reticulum membrane;0.0389990718610515!GO:0000059;protein import into nucleus, docking;0.039154377927246!GO:0001725;stress fiber;0.0395286744508213!GO:0032432;actin filament bundle;0.0395286744508213!GO:0051726;regulation of cell cycle;0.0397288663987848!GO:0000209;protein polyubiquitination;0.0402300384279694!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0403898865017464!GO:0006366;transcription from RNA polymerase II promoter;0.0404059746302474!GO:0007033;vacuole organization and biogenesis;0.0414760346066929!GO:0009892;negative regulation of metabolic process;0.0417270766724053!GO:0030911;TPR domain binding;0.0417270766724053!GO:0035023;regulation of Rho protein signal transduction;0.0425035020201079!GO:0006376;mRNA splice site selection;0.0439807741325664!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0439807741325664!GO:0033130;acetylcholine receptor binding;0.0440091623227614!GO:0009066;aspartate family amino acid metabolic process;0.0442237651115097!GO:0051252;regulation of RNA metabolic process;0.0443773344052623!GO:0007006;mitochondrial membrane organization and biogenesis;0.0444881332970418!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0464254623041846!GO:0033043;regulation of organelle organization and biogenesis;0.0464254623041846!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0466831749588937!GO:0030641;cellular hydrogen ion homeostasis;0.0467435867919349!GO:0048499;synaptic vesicle membrane organization and biogenesis;0.0467435867919349!GO:0030285;integral to synaptic vesicle membrane;0.0467435867919349!GO:0030880;RNA polymerase complex;0.046782145550956!GO:0048168;regulation of neuronal synaptic plasticity;0.0476425495801509!GO:0005952;cAMP-dependent protein kinase complex;0.0476447298885688!GO:0043488;regulation of mRNA stability;0.0476858765118435!GO:0043487;regulation of RNA stability;0.0476858765118435!GO:0005813;centrosome;0.0487314822859813!GO:0007041;lysosomal transport;0.0487520994166404!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0487520994166404!GO:0044262;cellular carbohydrate metabolic process;0.0488444108832193!GO:0030663;COPI coated vesicle membrane;0.0496820156514753!GO:0030126;COPI vesicle coat;0.0496820156514753!GO:0000188;inactivation of MAPK activity;0.0496890274437533!GO:0043254;regulation of protein complex assembly;0.0498828093580871
|sample_id=10032
|sample_note=
|sample_sex=mixed
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=postcentral gyrus
|top_motifs=REST:4.77298228866;NHLH1,2:4.30462972814;EGR1..3:3.93720889503;ZBTB6:3.64832739713;ZFP161:3.63197649213;AHR_ARNT_ARNT2:3.5998398497;MYFfamily:3.57362008041;PRRX1,2:3.54216225989;MTE{core}:3.51012993879;MED-1{core}:3.41271106431;TFAP2B:3.3770400854;MTF1:3.32753056724;PAX5:3.30110912844;ATF2:3.22654947328;HIC1:3.04436478467;GTF2I:2.90557735729;RREB1:2.88266041266;CUX2:2.77609673099;SMAD1..7,9:2.71866284539;RFX1:2.70915403158;FOXM1:2.70201062794;SOX5:2.5470752042;JUN:2.53479475007;BREu{core}:2.49919674755;LMO2:2.48302852887;DBP:2.40760434494;MZF1:2.3996103765;SOX{8,9,10}:2.33090385085;PATZ1:2.27263897183;SOX2:2.24946509605;PRDM1:2.1329449321;MAZ:2.1040443167;GFI1B:2.09801911224;TGIF1:2.03805152519;OCT4_SOX2{dimer}:2.01898992499;NKX2-3_NKX2-5:1.95743410859;EBF1:1.95681698197;POU6F1:1.94942437116;SOX17:1.9441363673;TFDP1:1.89943688249;GCM1,2:1.89545831032;ESRRA:1.89163579476;NKX3-2:1.8536811041;NFIX:1.81407563351;LEF1_TCF7_TCF7L1,2:1.74798816651;NANOG:1.71289607441;MAFB:1.70551086802;POU5F1:1.65876198292;PAX6:1.62953297674;GTF2A1,2:1.60709124211;HOXA9_MEIS1:1.60679247601;NRF1:1.55289219264;MYOD1:1.53090317007;RFX2..5_RFXANK_RFXAP:1.48312849626;ZNF238:1.47606693582;XBP1:1.46750979937;NFIL3:1.46407881181;ZNF423:1.4150150625;KLF4:1.39386287438;RORA:1.36457674403;POU3F1..4:1.36142718858;ARID5B:1.35382388865;EP300:1.35158962237;FOXQ1:1.2840941499;HOX{A4,D4}:1.24166520517;TFAP2{A,C}:1.23615758085;HAND1,2:1.22443204481;SP1:1.10347912616;HMGA1,2:1.090131856;GATA4:1.07308771577;CDC5L:1.07307991111;RBPJ:1.06815206806;FOX{F1,F2,J1}:1.06399678974;SREBF1,2:1.0545990175;MEF2{A,B,C,D}:0.970064002782;ZEB1:0.91482175438;ZNF143:0.848202851044;YY1:0.736457227203;CRX:0.731690789462;T:0.709485150472;CREB1:0.704393552759;HBP1_HMGB_SSRP1_UBTF:0.66090933053;HMX1:0.658004296292;SPZ1:0.62846538366;ADNP_IRX_SIX_ZHX:0.610399297843;TLX1..3_NFIC{dimer}:0.599612093046;TBX4,5:0.522303331449;XCPE1{core}:0.475915482513;GZF1:0.447232523478;HOX{A6,A7,B6,B7}:0.40101512938;STAT1,3:0.392659044912;FOXP1:0.392024037068;ATF4:0.385784257741;bHLH_family:0.369906002982;ZIC1..3:0.341210512588;TLX2:0.324486173528;ZNF384:0.322169156281;GFI1:0.303929863272;ATF5_CREB3:0.276895933031;FOX{D1,D2}:0.255734369182;FOXN1:0.248750912333;FOXP3:0.232441285755;ONECUT1,2:0.228266925283;AR:0.227962384809;PBX1:0.217532185604;NR5A1,2:0.202972849996;PAX2:0.167949494943;VSX1,2:0.129278434394;MYBL2:0.0951802879742;NFY{A,B,C}:0.030207771828;NFE2L2:0.00842821111314;PAX3,7:0.000185735713765;BPTF:-0.00413943598999;TFAP4:-0.00479684544094;IKZF1:-0.00913058749277;NR3C1:-0.0168219345268;PAX1,9:-0.019524472969;ZNF148:-0.0621103191152;SNAI1..3:-0.0948053490649;TOPORS:-0.113048037941;NR1H4:-0.139794672177;NANOG{mouse}:-0.140735566603;NFE2L1:-0.162957971075;LHX3,4:-0.165968656375;NKX6-1,2:-0.189835877155;IKZF2:-0.22516383126;PAX4:-0.246972640174;FOXL1:-0.248312673397;ESR1:-0.284139950928;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.30561065057;ALX1:-0.323169499585;TFCP2:-0.325624927517;NFE2:-0.373859822995;TEF:-0.388347997745;IRF7:-0.402439881679;PDX1:-0.416063931275;UFEwm:-0.432582666083;POU1F1:-0.439711196177;FOX{I1,J2}:-0.529626748986;SPI1:-0.534989311434;NFATC1..3:-0.567495274901;FOXA2:-0.584670244636;CEBPA,B_DDIT3:-0.619077664367;PAX8:-0.665244692617;GATA6:-0.666888222354;IRF1,2:-0.670580701716;TAL1_TCF{3,4,12}:-0.69070060248;GLI1..3:-0.704001632286;STAT2,4,6:-0.717084647368;TP53:-0.72453450131;ATF6:-0.743845420458;HNF1A:-0.755445304229;FOSL2:-0.763545293164;ETS1,2:-0.763983867398;FOXD3:-0.766408516353;SPIB:-0.817198050289;RXR{A,B,G}:-0.854505930925;PPARG:-0.89264226464;BACH2:-0.895775989365;FOS_FOS{B,L1}_JUN{B,D}:-0.909058581901;DMAP1_NCOR{1,2}_SMARC:-0.951345206009;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.969087428795;HNF4A_NR2F1,2:-0.973647218984;FOXO1,3,4:-0.985711787321;HSF1,2:-1.00843906091;TEAD1:-1.01658505281;RUNX1..3:-1.09787150894;TBP:-1.10769980418;ELK1,4_GABP{A,B1}:-1.11312590809;SRF:-1.16467200518;NFKB1_REL_RELA:-1.18470084149;HLF:-1.26395099265;HES1:-1.26449805169;E2F1..5:-1.30725261173;POU2F1..3:-1.34571372598;HIF1A:-1.35593892325;RXRA_VDR{dimer}:-1.3962325304;EN1,2:-1.44015126655;ALX4:-1.4792235415;NKX2-2,8:-1.51696301193;MYB:-1.59124169371;STAT5{A,B}:-1.59661085745;PITX1..3:-1.68145032075;ELF1,2,4:-1.80821187129;NKX3-1:-1.9180054832;EVI1:-1.95129094991;ZBTB16:-2.22045841439;HOX{A5,B5}:-2.25679118085;NKX2-1,4:-2.27707149899;CDX1,2,4:-2.59040866679;AIRE:-2.71688734095;NR6A1:-2.92438742515
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10032-101E5;search_select_hide=table117:FF:10032-101E5
}}
}}

Latest revision as of 12:15, 3 June 2020

Name:postcentral gyrus, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10638
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuepostcentral gyrus
dev stage44-52 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyClontech
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number3040377
catalog numberCat:636573
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004710
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10638 CAGE DRX008712 DRR009584
Accession ID Hg19

Library idBAMCTSS
CNhs10638 DRZ001009 DRZ002394
Accession ID Hg38

Library idBAMCTSS
CNhs10638 DRZ012359 DRZ013744
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.312
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.161
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.392
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0.0537
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.0782
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.544
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0277
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.144
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.00355
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.164
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.164
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.123
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0247
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0629
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.229
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0537
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.015
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0394
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.123
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0695
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.809
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0277
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0769
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.605
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0277
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.0537
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.619
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.326
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.00797
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0917
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.4
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.261
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.184
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.513
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.312
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.711
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0277
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.134
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.101
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0277
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.738
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.0782
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.144
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.389
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0277
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.123
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0277
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10638

Jaspar motifP-value
MA0002.20.00727
MA0003.10.41
MA0004.10.483
MA0006.10.399
MA0007.10.212
MA0009.10.165
MA0014.10.62
MA0017.10.00461
MA0018.20.0395
MA0019.10.802
MA0024.10.902
MA0025.10.148
MA0027.10.62
MA0028.10.074
MA0029.10.15
MA0030.10.217
MA0031.10.991
MA0035.20.126
MA0038.10.0511
MA0039.20.192
MA0040.10.406
MA0041.10.171
MA0042.10.652
MA0043.10.312
MA0046.10.143
MA0047.20.0523
MA0048.10.0877
MA0050.10.00131
MA0051.10.0597
MA0052.10.0587
MA0055.10.00204
MA0057.10.999
MA0058.10.437
MA0059.10.0855
MA0060.10.227
MA0061.10.00793
MA0062.20.0126
MA0065.28.88493e-4
MA0066.10.0406
MA0067.10.722
MA0068.10.153
MA0069.10.499
MA0070.10.0459
MA0071.10.0456
MA0072.10.526
MA0073.10.436
MA0074.10.196
MA0076.10.183
MA0077.10.17
MA0078.10.94
MA0079.20.373
MA0080.22.64965e-8
MA0081.10.04
MA0083.10.144
MA0084.10.688
MA0087.10.364
MA0088.10.141
MA0090.10.217
MA0091.10.548
MA0092.10.424
MA0093.10.512
MA0099.21.16641e-10
MA0100.10.518
MA0101.10.00284
MA0102.20.096
MA0103.10.299
MA0104.20.44
MA0105.14.58267e-4
MA0106.10.0326
MA0107.10.00579
MA0108.20.235
MA0111.10.419
MA0112.20.0013
MA0113.10.254
MA0114.10.00376
MA0115.10.428
MA0116.10.00275
MA0117.10.93
MA0119.10.0373
MA0122.10.756
MA0124.10.744
MA0125.10.245
MA0131.10.853
MA0135.10.00687
MA0136.12.19669e-10
MA0137.20.258
MA0138.20.0965
MA0139.10.403
MA0140.10.011
MA0141.10.028
MA0142.10.995
MA0143.10.902
MA0144.10.219
MA0145.10.251
MA0146.10.0122
MA0147.10.311
MA0148.10.0639
MA0149.10.0163
MA0150.10.00184
MA0152.10.797
MA0153.10.333
MA0154.10.0444
MA0155.10.769
MA0156.15.43349e-6
MA0157.10.635
MA0159.10.00701
MA0160.10.0523
MA0162.10.134
MA0163.12.86263e-6
MA0164.10.783
MA0258.10.0151
MA0259.10.74



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10638

Novel motifP-value
10.033
100.0217
1000.297
1010.924
1020.701
1030.178
1040.17
1050.338
1060.0712
1070.127
1080.889
1090.0102
110.016
1100.0355
1110.0609
1120.328
1130.675
1140.0721
1150.971
1160.217
1170.0079
1180.0873
1190.111
120.795
1200.141
1210.662
1220.551
1230.785
1240.0252
1250.156
1260.0221
1270.484
1280.18
1290.628
137.57082e-4
1300.474
1310.0774
1320.697
1330.00139
1340.258
1350.135
1360.00964
1370.708
1380.791
1390.0849
140.937
1400.118
1410.23
1420.945
1430.0104
1440.848
1450.102
1460.649
1470.939
1480.151
1490.376
150.0658
1500.162
1510.706
1520.156
1530.63
1540.585
1550.357
1560.44
1570.355
1580.877
1590.139
160.0752
1600.222
1610.163
1620.882
1630.737
1640.0159
1650.0205
1660.811
1670.266
1680.692
1690.00764
170.187
180.214
190.217
20.933
200.0729
210.0873
220.263
230.429
240.11
250.443
264.21253e-5
270.957
280.603
290.00821
30.0228
300.532
310.95
320.035
330.0684
340.859
350.52
360.1
370.0421
380.327
390.261
40.986
400.0664
410.464
420.152
430.105
440.0855
450.855
460.0487
470.0644
480.0583
490.138
50.431
500.36
510.561
520.653
530.891
540.515
550.3
560.502
570.246
580.281
590.172
60.58
600.0745
610.0561
620.158
630.177
640.231
650.323
660.277
670.358
680.36
690.479
70.0501
700.0228
710.00724
720.486
730.047
740.487
750.0272
760.333
770.29
780.00224
790.171
80.0562
800.939
810.59
820.486
830.188
840.694
850.309
860.197
870.0125
880.841
890.613
90.548
900.0345
910.348
920.44
930.791
940.0652
950.0272
960.948
970.761
980.224
990.94



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10638


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0002581 (postcentral gyrus)
0001872 (parietal lobe)
0000200 (gyrus)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010032 (human postcentral gyrus - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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