FF:11331-117E8: Difference between revisions

Revision as of 17:15, 29 June 2012

Name:	Prostate Epithelial Cells, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	prostate
dev stage	NA
sex	male
age	NA
cell type	epithelial cell
cell line	NA
company	Lonza
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.00591
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.268
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.644
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0794
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.119
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0988
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0.0794
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.229
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.506
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.398
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	1.115
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.369
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.054
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0794
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.858
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.39
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0794
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.581
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.965
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0794
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.781
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11972

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.405
MA0003.1	MA0003.1	0.577
MA0004.1	MA0004.1	0.119
MA0006.1	MA0006.1	0.00542
MA0007.1	MA0007.1	0.709
MA0009.1	MA0009.1	0.323
MA0014.1	MA0014.1	0.642
MA0017.1	MA0017.1	0.615
MA0018.2	MA0018.2	7.34117e-4
MA0019.1	MA0019.1	0.256
MA0024.1	MA0024.1	1.09633e-7
MA0025.1	MA0025.1	0.0803
MA0027.1	MA0027.1	0.507
MA0028.1	MA0028.1	0.272
MA0029.1	MA0029.1	0.199
MA0030.1	MA0030.1	0.289
MA0031.1	MA0031.1	0.225
MA0035.2	MA0035.2	0.166
MA0038.1	MA0038.1	4.93129e-4
MA0039.2	MA0039.2	0.0758
MA0040.1	MA0040.1	0.355
MA0041.1	MA0041.1	0.72
MA0042.1	MA0042.1	0.23
MA0043.1	MA0043.1	0.00544
MA0046.1	MA0046.1	0.88
MA0047.2	MA0047.2	0.361
MA0048.1	MA0048.1	0.761
MA0050.1	MA0050.1	1.9262e-6
MA0051.1	MA0051.1	4.88252e-4
MA0052.1	MA0052.1	0.0213
MA0055.1	MA0055.1	0.894
MA0057.1	MA0057.1	0.0434
MA0058.1	MA0058.1	0.0314
MA0059.1	MA0059.1	0.705
MA0060.1	MA0060.1	3.44309e-7
MA0061.1	MA0061.1	0.238
MA0062.2	MA0062.2	0.0168
MA0065.2	MA0065.2	0.287
MA0066.1	MA0066.1	0.132
MA0067.1	MA0067.1	0.00156
MA0068.1	MA0068.1	0.0743
MA0069.1	MA0069.1	0.0313
MA0070.1	MA0070.1	0.412
MA0071.1	MA0071.1	0.225
MA0072.1	MA0072.1	0.565
MA0073.1	MA0073.1	0.819
MA0074.1	MA0074.1	0.27
MA0076.1	MA0076.1	0.107
MA0077.1	MA0077.1	0.109
MA0078.1	MA0078.1	0.543
MA0079.2	MA0079.2	0.0755
MA0080.2	MA0080.2	1.02942e-6
MA0081.1	MA0081.1	0.0143
MA0083.1	MA0083.1	0.267
MA0084.1	MA0084.1	0.291
MA0087.1	MA0087.1	0.909
MA0088.1	MA0088.1	0.557
MA0090.1	MA0090.1	8.55012e-4
MA0091.1	MA0091.1	0.713
MA0092.1	MA0092.1	0.971
MA0093.1	MA0093.1	0.0685
MA0099.2	MA0099.2	0.369
MA0100.1	MA0100.1	0.0472
MA0101.1	MA0101.1	0.0167
MA0102.2	MA0102.2	0.036
MA0103.1	MA0103.1	2.07342e-6
MA0104.2	MA0104.2	0.0399
MA0105.1	MA0105.1	0.522
MA0106.1	MA0106.1	1.26774e-10
MA0107.1	MA0107.1	0.0146
MA0108.2	MA0108.2	0.368
MA0111.1	MA0111.1	0.92
MA0112.2	MA0112.2	0.0633
MA0113.1	MA0113.1	0.457
MA0114.1	MA0114.1	0.925
MA0115.1	MA0115.1	0.362
MA0116.1	MA0116.1	0.782
MA0117.1	MA0117.1	0.311
MA0119.1	MA0119.1	0.697
MA0122.1	MA0122.1	0.533
MA0124.1	MA0124.1	0.58
MA0125.1	MA0125.1	0.899
MA0131.1	MA0131.1	0.505
MA0135.1	MA0135.1	0.837
MA0136.1	MA0136.1	5.69551e-6
MA0137.2	MA0137.2	0.00279
MA0138.2	MA0138.2	0.894
MA0139.1	MA0139.1	0.257
MA0140.1	MA0140.1	0.066
MA0141.1	MA0141.1	0.47
MA0142.1	MA0142.1	0.95
MA0143.1	MA0143.1	0.177
MA0144.1	MA0144.1	0.377
MA0145.1	MA0145.1	0.0149
MA0146.1	MA0146.1	0.24
MA0147.1	MA0147.1	0.0833
MA0148.1	MA0148.1	0.249
MA0149.1	MA0149.1	0.408
MA0150.1	MA0150.1	0.612
MA0152.1	MA0152.1	0.338
MA0153.1	MA0153.1	0.334
MA0154.1	MA0154.1	0.54
MA0155.1	MA0155.1	0.717
MA0156.1	MA0156.1	3.0597e-4
MA0157.1	MA0157.1	0.059
MA0159.1	MA0159.1	0.172
MA0160.1	MA0160.1	0.249
MA0162.1	MA0162.1	0.0249
MA0163.1	MA0163.1	0.84
MA0164.1	MA0164.1	0.239
MA0258.1	MA0258.1	0.528
MA0259.1	MA0259.1	0.609

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11972

Novel motif	Logo	P-value
1	1	0.899
10	10	0.213
100	100	0.85
101	101	0.0861
102	102	0.253
103	103	0.173
104	104	0.663
105	105	0.82
106	106	0.037
107	107	0.176
108	108	0.0344
109	109	0.0475
11	11	0.613
110	110	0.415
111	111	0.43
112	112	0.202
113	113	0.758
114	114	0.32
115	115	0.0189
116	116	0.42
117	117	0.443
118	118	0.914
119	119	0.826
12	12	0.215
120	120	0.00933
121	121	0.824
122	122	0.758
123	123	0.336
124	124	0.151
125	125	0.168
126	126	0.83
127	127	0.62
128	128	0.206
129	129	0.0859
13	13	0.469
130	130	0.0559
131	131	0.965
132	132	0.14
133	133	0.107
134	134	0.152
135	135	0.632
136	136	0.0406
137	137	0.03
138	138	0.982
139	139	0.707
14	14	0.992
140	140	0.126
141	141	0.95
142	142	0.885
143	143	0.998
144	144	0.549
145	145	0.583
146	146	0.44
147	147	0.549
148	148	0.995
149	149	0.255
15	15	0.638
150	150	0.227
151	151	0.276
152	152	0.00355
153	153	0.981
154	154	0.755
155	155	0.802
156	156	0.638
157	157	0.627
158	158	0.0477
159	159	0.75
16	16	0.0271
160	160	0.951
161	161	0.821
162	162	0.327
163	163	0.944
164	164	0.479
165	165	0.82
166	166	0.574
167	167	0.214
168	168	0.377
169	169	0.102
17	17	0.335
18	18	0.7
19	19	0.502
2	2	0.0243
20	20	0.736
21	21	0.816
22	22	0.592
23	23	0.385
24	24	0.132
25	25	0.536
26	26	0.902
27	27	0.279
28	28	0.823
29	29	0.366
3	3	0.515
30	30	0.172
31	31	0.609
32	32	0.414
33	33	0.383
34	34	0.53
35	35	0.386
36	36	0.0473
37	37	0.127
38	38	0.764
39	39	0.219
4	4	0.681
40	40	0.421
41	41	0.505
42	42	0.665
43	43	0.863
44	44	0.0494
45	45	0.223
46	46	0.721
47	47	0.486
48	48	0.366
49	49	0.237
5	5	0.664
50	50	0.619
51	51	0.894
52	52	0.256
53	53	0.168
54	54	0.734
55	55	0.35
56	56	0.736
57	57	0.966
58	58	0.782
59	59	0.104
6	6	0.279
60	60	0.403
61	61	0.987
62	62	0.693
63	63	0.227
64	64	0.906
65	65	0.577
66	66	0.431
67	67	0.525
68	68	0.338
69	69	0.145
7	7	0.864
70	70	0.0348
71	71	0.863
72	72	0.868
73	73	0.00175
74	74	0.0246
75	75	0.478
76	76	0.966
77	77	0.00552
78	78	0.0622
79	79	0.105
8	8	0.464
80	80	0.0802
81	81	0.684
82	82	0.25
83	83	0.0811
84	84	0.606
85	85	0.146
86	86	0.736
87	87	0.00754
88	88	0.652
89	89	0.0215
9	9	0.686
90	90	0.578
91	91	0.367
92	92	0.534
93	93	0.578
94	94	0.303
95	95	0.068
96	96	0.605
97	97	0.634
98	98	0.781
99	99	0.0397

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11972

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000145 human prostate epithelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002231 (epithelial cell of prostate)
0000223 (endodermal cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002367 (prostate gland)
0002100 (trunk)
0000483 (epithelium)
0002530 (gland)
0000926 (mesoderm)
0000479 (tissue)
0001007 (digestive system)
0005156 (reproductive structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0006554 (urinary system structure)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0000990 (reproductive system)
0002050 (embryonic structure)
0005153 (epithelial bud)
0005911 (endo-epithelium)
0004921 (subdivision of digestive tract)
0000161 (orifice)
0000162 (cloaca)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0003102 (surface structure)
0003929 (gut epithelium)
0003104 (mesenchyme)
0010147 (male accessory sex gland)
0005256 (trunk mesenchyme)
0000925 (endoderm)
0006598 (presumptive structure)
0009846 (embryonic cloacal epithelium)
0004185 (endodermal part of digestive tract)
0005157 (epithelial fold)
0003937 (sex gland)
0005399 (male reproductive gland)
0002532 (epiblast (generic))
0003353 (epithelium of hindgut)
0004902 (urogenital sinus epithelium)
0001555 (digestive tract)
0001008 (renal system)
0003101 (male organism)
0004122 (genitourinary system)
0001353 (anal region)
0000163 (embryonic cloaca)
0000079 (male reproductive system)
0007026 (primitive gut)
0006866 (terminal part of digestive tract)
0009142 (entire embryonic mesenchyme)
0001046 (hindgut)
0000164 (primitive urogenital sinus)
0003064 (intermediate mesoderm)
0006595 (presumptive endoderm)
0006603 (presumptive mesoderm)
0000931 (proctodeum)
0003820 (prostate bud)
0009847 (prostate field)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr17:7493405..7493419,-!p1@SOX15!2.35!225.17!SOX15;;chr1:6479968..6479986,-!p1@HES2!2.22!165.82!HES2;;chr11:34642612..34642646,+!p1@EHF!2.13!132.53!EHF;;chr1:209979467..209979494,-!p1@IRF6!2.07!130.93!IRF6;;chr1:209979411..209979433,-!p2@IRF6!1.97!92.83!IRF6;;chr3:189507432..189507459,+!p1@TP63!1.71!50.73!TP63;;chr12:54785054..54785072,-!p4@ZNF385A!1.70!55.14!ZNF385A;;chr3:111314186..111314204,-!p1@ZBED2!1.70!48.72!ZBED2;;chr17:7492684..7492778,-!p2@SOX15!1.67!95.04!SOX15;;chr15:83953397..83953425,-!p1@BNC1!1.66!51.33!BNC1;;chr12:54785074..54785122,-!p2@ZNF385A!1.60!58.55!ZNF385A;;chr6:10415276..10415341,-!p2@TFAP2A!1.55!41.71!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.52!52.53!TFAP2A;;chr2:176969228..176969260,+!p1@HOXD11!1.43!25.66!HOXD11;;chr11:34645791..34645836,+!p3@EHF!1.37!22.66!EHF;;chr6:34524093..34524135,-!p1@SPDEF!1.32!19.85!SPDEF;;chr10:8096631..8096660,+!p1@GATA3!1.31!23.26!GATA3;;chr14:38064429..38064486,-!p1@FOXA1!1.28!18.25!FOXA1;;chr19:9811347..9811351,-!p1@ZNF812!1.26!17.24!ZNF812;;chr12:66218836..66218888,+!p1@HMGA2!1.23!147.17!HMGA2;;chr2:176969179..176969226,+!p2@HOXD11!1.23!16.04!HOXD11;;chr11:34642656..34642667,+!p2@EHF!1.23!15.84!EHF;;chr20:55204351..55204377,+!p1@TFAP2C!1.22!20.05!TFAP2C;;chr11:65686802..65686818,+!p6@DRAP1!1.19!24.86!DRAP1;;chr6:34524049..34524089,-!p2@SPDEF!1.17!13.63!SPDEF;;chr10:8096772..8096787,+!p2@GATA3!1.16!16.04!GATA3;;chr17:7492504..7492520,-!p3@SOX15!1.14!12.83!SOX15;;chr8:10588010..10588030,-!p1@SOX7!1.13!12.43!SOX7;;chr19:45908292..45908374,-!p1@PPP1R13L!1.11!105.47!PPP1R13L;;chr6:34524025..34524045,-!p3@SPDEF!1.11!12.03!SPDEF;;chr17:70117153..70117174,+!p1@SOX9!1.10!118.70!SOX9;;chr5:134369905..134369972,-!p1@PITX1!1.09!17.44!PITX1;;chr2:122042770..122042785,-!p1@TFCP2L1!1.08!11.03!TFCP2L1;;chr1:209979375..209979386,-!p4@IRF6!1.07!10.83!IRF6;;chr8:102504651..102504683,+!p1@GRHL2!1.07!10.63!GRHL2;;chr3:12330560..12330579,+!p1@PPARG!1.06!12.03!PPARG;;chr3:111314230..111314241,-!p2@ZBED2!1.05!10.23!ZBED2;;chr12:66218598..66218645,+!p2@HMGA2!1.04!46.72!HMGA2;;chr15:67418047..67418093,+!p4@SMAD3!1.03!12.23!SMAD3;;chr2:46524897..46524911,+!p2@EPAS1!1.02!26.87!EPAS1;;chr5:72744445..72744466,-!p2@FOXD1!1.01!15.64!FOXD1;;chr1:151032860..151032918,+!p1@MLLT11!1.00!108.67!MLLT11;;chr8:49833948..49833973,-!p2@SNAI2!1.00!58.75!SNAI2;;chr15:101069113..101069169,-!p1@CERS3!1.00!9.02!CERS3;;chr7:27205106..27205134,-!p2@HOXA9!0.99!8.82!HOXA9;;chr12:66218255..66218304,+!p3@HMGA2!0.98!23.66!HMGA2;;chr19:20278043..20278054,+!p2@ZNF486!0.98!8.62!ZNF486;;chr12:66218904..66218913,+!p11@HMGA2!0.96!8.02!HMGA2;;chr6:21593973..21593988,+!p1@SOX4!0.95!290.73!SOX4;;chr6:10415484..10415508,-!p3@TFAP2A!0.95!7.82!TFAP2A;;chr17:7492979..7492991,-!p5@SOX15!0.95!7.82!SOX15;;chr6:21597765..21597779,+!p2@SOX4!0.94!64.96!SOX4;;chr1:935398..935465,-!p2@HES4!0.94!16.44!HES4;;chr15:83953373..83953386,-!p2@BNC1!0.94!7.62!BNC1;;chr17:46682321..46682362,-!p1@HOXB6!0.94!7.62!HOXB6;;chr13:73633131..73633149,+!p1@KLF5!0.93!83.41!KLF5;;chr1:151032922..151032951,+!p2@MLLT11!0.91!12.23!MLLT11;;chr3:189507523..189507535,+!p5@TP63!0.91!7.22!TP63;;chr5:72744594..72744609,-!p1@FOXD1!0.90!32.88!FOXD1;;chr2:101591314..101591333,+!p2@NPAS2!0.89!7.82!NPAS2;;chr15:67418119..67418162,+!p5@SMAD3!0.89!7.62!SMAD3;;chr11:65686732..65686756,+!p2@DRAP1!0.88!29.27!DRAP1;;chr8:49833978..49833996,-!p1@SNAI2!0.87!138.35!SNAI2;;chr6:1312325..1312340,+!p1@FOXQ1!0.87!10.83!FOXQ1;;chr10:126138597..126138612,-!p1@NKX1-2!0.87!6.42!NKX1-2;;chr12:66218923..66218934,+!p14@HMGA2!0.87!6.42!HMGA2;;chr17:46806067..46806097,-!p1@HOXB13!0.87!6.42!HOXB13;;chrY:2803415..2803468,+!p1@ZFY!0.86!6.22!ZFY;;chr10:8095593..8095625,+!p3@GATA3!0.85!7.22!GATA3;;chr14:37131058..37131139,+!p1@PAX9!0.85!6.02!PAX9;;chr6:10412576..10412599,-!p5@TFAP2A!0.85!6.02!TFAP2A;;chr17:3571863..3571881,-!p1@TAX1BP3!0.84!446.13!TAX1BP3;;chr12:115121962..115121987,-!p1@TBX3!0.84!53.13!TBX3;;chr17:45928521..45928539,-!p1@SP6!0.83!5.81!SP6;;chr17:36105042..36105060,-!p1@HNF1B!0.82!5.61!HNF1B;;chr7:27205136..27205164,-!p1@HOXA9!0.82!5.61!HOXA9;;chr8:102504690..102504704,+!p3@GRHL2!0.81!5.41!GRHL2;;chr3:5021268..5021282,+!p4@BHLHE40!0.80!11.43!BHLHE40;;chr12:125002739..125002756,-!p6@NCOR2!0.80!8.22!NCOR2;;chr1:151032739..151032748,+!p6@MLLT11!0.80!6.82!MLLT11;;chr2:208030647..208030689,-!p1@KLF7!0.79!46.52!KLF7;;chr17:46687959..46688007,-!p2@HOXB7!0.79!7.42!HOXB7;;chr5:134369879..134369898,-!p2@PITX1!0.79!5.21!PITX1;;chr7:27224842..27224872,-!p1@HOXA11!0.78!5.01!HOXA11;;chr1:209979449..209979460,-!p3@IRF6!0.78!5.01!IRF6;;chr17:45928443..45928473,-!p2@SP6!0.78!5.01!SP6;;chr1:935467..935484,-!p1@HES4!0.77!23.26!HES4;;chr2:101436564..101436647,+!p1@NPAS2!0.76!107.27!NPAS2;;chr19:53496768..53496799,-!p1@ZNF702P!0.76!7.62!ZNF702P;;chr3:189507460..189507471,+!p3@TP63!0.76!4.81!TP63;;chr6:21594845..21594908,+!p6@SOX4!0.75!7.82!SOX4;;chr3:25469724..25469773,+!p1@RARB!0.75!7.02!RARB;;chr7:27135591..27135658,-!p1@HOXA1!0.74!9.22!HOXA1;;chr3:150126904..150126958,+!p7@TSC22D2!0.74!8.42!TSC22D2;;chr16:67881588..67881612,-!p2@CENPT!0.74!6.42!CENPT;;chr1:8938709..8938720,-!p3@ENO1!0.73!235.60!ENO1;;chr14:61116183..61116208,-!p1@SIX1!0.73!18.45!SIX1;;chr1:201979743..201979762,+!p1@ELF3!0.73!4.41!ELF3;;chr5:2751762..2751784,-!p1@IRX2!0.73!4.41!IRX2;;chr1:151032782..151032801,+!p4@MLLT11!0.72!9.22!MLLT11;;chr6:21597370..21597408,+!p5@SOX4!0.72!7.22!SOX4;;chr2:176969124..176969155,+!p5@HOXD11!0.72!4.21!HOXD11;;chr3:150126759..150126784,+!p2@TSC22D2!0.71!21.05!TSC22D2;;chr12:66218212..66218244,+!p5@HMGA2!0.71!6.22!HMGA2;;chr12:125002827..125002855,-!p5@NCOR2!0.70!6.02!NCOR2;;chr12:66358080..66358094,+!p15@HMGA2!0.70!4.01!HMGA2;;chr12:48298765..48298783,-!p2@VDR!0.69!8.82!VDR;;chr15:96869255..96869291,+!p6@NR2F2!0.69!7.62!NR2F2;;chr2:231084820..231084836,-!p5@SP110!0.69!4.61!SP110;;chr3:150126101..150126118,+!p6@TSC22D2!0.68!6.62!TSC22D2;;chr17:46688334..46688385,-!p1@HOXB7!0.68!5.81!HOXB7;;chr12:115122005..115122016,-!p3@TBX3!0.68!4.61!TBX3;;chr12:66357214..66357233,+!p13@HMGA2!0.68!3.81!HMGA2;;chr2:176994408..176994492,+!p1@HOXD8!0.68!3.81!HOXD8;;chr6:10419768..10419819,-!p6@TFAP2A!0.68!3.81!TFAP2A;;chr14:62162285..62162296,+!p3@HIF1A!0.67!21.86!HIF1A;;chr11:34643638..34643667,+!p8@EHF!0.66!3.61!EHF;;chrY:21906594..21906622,-!p1@KDM5D!0.66!3.61!KDM5D;;chr15:67418177..67418204,+!p9@SMAD3!0.66!3.61!SMAD3;;chr16:31076332..31076388,-!p3@ZNF668!0.66!3.61!ZNF668;;chr14:21566731..21566836,-!p1@ZNF219!0.65!43.31!ZNF219;;chr2:70314240..70314256,+!p4@PCBP1!0.65!7.82!PCBP1;;chr21:36260343..36260402,-!p6@RUNX1!0.65!6.02!RUNX1;;chr11:65687362..65687436,+!p3@DRAP1!0.63!17.44!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!0.63!14.64!FOSL1;;chr12:27485762..27485776,+!p3@ARNTL2!0.63!10.03!ARNTL2;;chr1:8924055..8924074,-!p9@ENO1!0.63!6.22!ENO1;;chr6:10412392..10412409,-!p4@TFAP2A!0.63!3.81!TFAP2A;;chr10:77161533..77161546,-!p2@ZNF503!0.62!14.64!ZNF503;;chr10:77161133..77161176,-!p3@ZNF503!0.62!7.62!ZNF503;;chr14:21566882..21566898,-!p3@ZNF219!0.62!5.01!ZNF219;;chr21:38071430..38071456,+!p1@SIM2!0.62!3.21!SIM2;;chr16:67881647..67881663,-!p3@CENPT!0.62!3.21!CENPT;;chr14:62162258..62162269,+!p2@HIF1A!0.61!35.69!HIF1A;;chr19:52598958..52599026,-!p1@ZNF841!0.61!35.49!ZNF841;;chr10:77161504..77161530,-!p1@ZNF503!0.60!47.92!ZNF503;;chr8:128750654..128750793,+!p3@MYC!0.60!14.04!MYC;;chr16:73092898..73092931,-!p1@ZFHX3!0.60!13.43!ZFHX3;;chr19:58326246..58326262,-!p2@ZNF552!0.60!8.02!ZNF552;;chr14:62203595..62203676,+!p4@HIF1A!0.60!6.22!HIF1A;;chr15:83953694..83953708,-!p4@BNC1!0.60!3.01!BNC1;;chr6:28321971..28321995,-!p1@ZNF323!0.60!3.01!ZNF323;;chr7:26191809..26191890,+!p1@NFE2L3!0.59!17.24!NFE2L3;;chr3:141087393..141087426,+!p3@ZBTB38!0.59!13.63!ZBTB38;;chr2:60780607..60780624,-!p2@BCL11A!0.59!10.23!BCL11A;;chr2:231084639..231084654,-!p2@SP110!0.59!5.21!SP110;;chr12:66218573..66218596,+!p7@HMGA2!0.59!4.61!HMGA2;;chr13:73636516..73636532,+!p3@KLF5!0.59!3.41!KLF5;;chr12:80084737..80084763,-!p3@PAWR!0.58!12.43!PAWR;;chr21:36260295..36260310,-!p3@RUNX1!0.58!5.01!RUNX1;;chr15:96869222..96869251,+!p18@NR2F2!0.58!3.41!NR2F2;;chr15:83953474..83953483,-!p3@BNC1!0.58!2.81!BNC1;;chr16:86612320..86612394,+!p1@FOXL1!0.58!2.81!FOXL1;;chr19:45908286..45908291,-!p3@PPP1R13L!0.58!2.81!PPP1R13L;;chr19:53758058..53758088,-!p2@ZNF677!0.57!10.63!ZNF677;;chrX:56258844..56258882,+!p1@KLF8!0.57!4.01!KLF8;;chr1:8934931..8934947,-!p4@ENO1!0.56!10.43!ENO1;;chr19:17356189..17356221,-!p2@NR2F6!0.56!4.81!NR2F6;;chr10:77161650..77161661,-!p4@ZNF503!0.56!4.01!ZNF503;;chr1:201979703..201979721,+!p2@ELF3!0.56!2.61!ELF3;;chr20:18038521..18038571,-!p1@OVOL2!0.56!2.61!OVOL2;;chr3:138665937..138665968,-!p1@FOXL2!0.56!2.61!FOXL2;;chr7:27192185..27192209,-!p1@HOXA3!0.56!2.61!HOXA3;;chr19:20278012..20278034,+!p1@ZNF486!0.55!26.67!ZNF486;;chr6:21597283..21597312,+!p7@SOX4!0.55!3.61!SOX4;;chr10:111967345..111967422,+!p1@MXI1!0.54!51.33!MXI1;;chr13:41593425..41593480,-!p1@ELF1!0.54!19.65!ELF1;;chr17:41623692..41623715,-!p1@ETV4!0.54!13.03!ETV4;;chr12:26277929..26277955,-!p3@BHLHE41!0.54!3.81!BHLHE41;;chr14:23755297..23755350,-!p1@HOMEZ!0.53!36.29!HOMEZ;;chr21:36421535..36421610,-!p2@RUNX1!0.53!10.43!RUNX1;;chr19:47922750..47922795,-!p1@MEIS3!0.53!4.41!MEIS3;;chr20:50721803..50721857,-!p2@ZFP64!0.53!4.21!ZFP64;;chr15:96869292..96869320,+!p15@NR2F2!0.53!3.81!NR2F2;;chr5:72744562..72744573,-!p3@FOXD1!0.53!3.21!FOXD1;;chr7:27224795..27224840,-!p2@HOXA11!0.53!2.41!HOXA11;;chr10:126138622..126138638,-!p2@NKX1-2!0.53!2.41!NKX1-2;;chr10:8100691..8100732,+!p5@GATA3!0.53!2.41!GATA3;;chr12:54332608..54332636,+!p1@HOXC13!0.53!2.41!HOXC13;;chr14:74256787..74256858,-!p6@C14orf43!0.53!2.41!C14orf43;;chr19:45908278..45908282,-!p5@PPP1R13L!0.53!2.41!PPP1R13L;;chr10:3827389..3827408,-!p1@KLF6!0.52!228.98!KLF6;;chr19:50169013..50169062,-!p2@IRF3!0.52!17.04!IRF3;;chr2:70142232..70142251,+!p1@MXD1!0.52!16.44!MXD1;;chr16:79634624..79634642,-!p1@MAF!0.52!11.43!MAF;;chr2:214015111..214015179,-!p1@IKZF2!0.52!4.81!IKZF2;;chr6:21597514..21597578,+!p4@SO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ZFP64!0.18!1.80!ZFP64;;chr1:16302608..16302621,-!p2@ZBTB17!0.18!1.60!ZBTB17;;chr16:8962202..8962222,-!p3@CARHSP1!0.18!1.60!CARHSP1;;chr16:29818199..29818216,+!p11@MAZ!0.18!1.40!MAZ;;chr14:64971014..64971044,+!p4@ZBTB1!0.18!1.40!ZBTB1;;chr4:87928105..87928126,+!p13@AFF1!0.18!1.20!AFF1;;chr15:57210759..57210775,+!p7@TCF12!0.18!1.20!TCF12;;chr7:137686552..137686564,-!p9@CREB3L2!0.18!1.20!CREB3L2;;chr8:145535860..145535895,+!p2@HSF1!0.18!1.00!HSF1;;chr14:69260117..69260141,-!p4@ZFP36L1!0.18!1.00!ZFP36L1;;chr4:106156933..106156947,+!p3@TET2!0.18!1.00!TET2;;chr19:47425425..47425441,+!p2@ARHGAP35!0.18!0.80!ARHGAP35;;chr1:93811637..93811648,+!p6@DR1!0.18!0.80!DR1;;chr12:133614119..133614136,+!p5@ZNF84!0.18!0.80!ZNF84;;chr12:26278008..26278024,-!p4@BHLHE41!0.18!0.80!BHLHE41;;chr17:38498510..38498540,+!p7@RARA!0.18!0.80!RARA;;chr3:12329320..12329338,+!p4@PPARG!0.18!0.60!PPARG;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.18!0.60!GLIS1;;chr1:26496382..26496457,+!p1@ZNF593!0.17!80.40!ZNF593;;chr2:220094514..220094599,+!p1@ANKZF1!0.17!38.90!ANKZF1;;chr14:103058948..103059005,+!p1@RCOR1!0.17!36.49!RCOR1;;chr19:58125580..58125639,+!p1@ZNF134!0.17!20.65!ZNF134;;chr19:52873166..52873208,+!p1@ZNF880!0.17!17.85!ZNF880;;chr18:32870260..32870293,+!p1@ZNF271!0.17!16.44!ZNF271;;chr19:9649268..9649298,-!p1@ZNF426!0.17!8.42!ZNF426;;chr14:100705335..100705360,+!p4@YY1!0.17!7.02!YY1;;chr19:45909594..45909625,-!p2@PPP1R13L!0.17!5.41!PPP1R13L;;chr6:20403916..20403965,+!p3@E2F3!0.17!5.21!E2F3;;chr1:23694794..23694863,-!p1@ZNF436!0.17!3.81!ZNF436;;chr20:39946361..39946379,-!p2@ZHX3!0.17!3.21!ZHX3;;chr8:116681221..116681236,-!p3@TRPS1!0.17!3.21!TRPS1;;chr12:72057747..72057854,+!p4@THAP2!0.17!2.81!THAP2;;chr19:59084922..59084947,-!p3@MZF1!0.17!2.21!MZF1;;chr15:61521417..61521460,-!p2@RORA!0.17!2.21!RORA;;chr17:7382834..7382855,-!p6@ZBTB4!0.17!1.40!ZBTB4;;chr19:56904947..56904975,-!p2@ZNF582!0.17!1.40!ZNF582;;chr12:80084279..80084293,-!p8@PAWR!0.17!1.40!PAWR;;chr9:20621927..20621996,-!p3@MLLT3!0.17!1.40!MLLT3;;chr4:56413104..56413117,-!p5@CLOCK!0.17!1.20!CLOCK;;chr4:87857491..87857519,+!p10@AFF1!0.17!1.00!AFF1;;chr3:170075080..170075089,+!p7@SKIL!0.17!0.80!SKIL;;chr10:44144187..44144201,-!p3@ZNF32!0.17!0.80!ZNF32;;chr18:56530573..56530591,+!p9@ZNF532!0.17!0.80!ZNF532;;chr19:20844346..20844351,-!p2@ZNF626!0.17!0.80!ZNF626;;chr1:249153309..249153330,-!p4@ZNF692!0.17!0.80!ZNF692;;chr6:28973366..28973394,-!p2@ZNF311!0.17!0.80!ZNF311;;chr6:44355499..44355514,+!p3@CDC5L!0.17!0.60!CDC5L;;chr19:45254508..45254528,+!p12@BCL3!0.17!0.60!BCL3;;chr3:33481835..33481905,-!p1@UBP1!0.16!21.65!UBP1;;chr2:70314849..70314860,+!p3@PCBP1!0.16!18.85!PCBP1;;chr22:42229246..42229270,+!p2@SREBF2!0.16!15.84!SREBF2;;chr15:96873892..96873919,+!p4@NR2F2!0.16!12.03!NR2F2;;chr12:96588219..96588263,+!p2@ELK3!0.16!8.82!ELK3;;chr8:10697329..10697365,-!p2@PINX1,p2@SOX7!0.16!7.82!SOX7;;chr1:161015676..161015694,-!p3@USF1!0.16!4.21!USF1;;chr1:211433275..211433335,+!p2@RCOR3!0.16!3.21!RCOR3;;chr1:27022839..27022890,+!p3@ARID1A!0.16!3.01!ARID1A;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.16!3.01!ZKSCAN1;;chr19:8942962..8942987,-!p1@ZNF558!0.16!2.81!ZNF558;;chr3:12329358..12329393,+!p3@PPARG!0.16!2.41!PPARG;;chr3:44754126..44754171,+!p1@ZNF502!0.16!2.41!ZNF502;;chr19:52956798..52956843,+!p1@ZNF578!0.16!1.80!ZNF578;;chr20:45142154..45142227,-!p1@ZNF334!0.16!1.80!ZNF334;;chr15:90544688..90544728,+!p2@ZNF710!0.16!1.60!ZNF710;;

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FF:11331-117E8: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:15, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0