FF:10019-101D1: Difference between revisions

Revision as of 17:54, 9 July 2012

Name:	lung, adult, pool1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	lung
dev stage	46,65,94 years old adult
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Ambion
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	0910061 -10
catalog number	Cat:AM6000 Lot:0910061 -10
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.113
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.0441
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.199
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.552
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0441
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0441
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0.378
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0.0441
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.525
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.186
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.165
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0441
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0.0441
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.204
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.235
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.0841
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.0438
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.525
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0841
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.0441
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.687
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0.902
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0.0297
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.397
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.0841
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0.0841
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.0441
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.228
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0441
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.462
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.432
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0841
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.215
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.121
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.0441
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.0441
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0441
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.121
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.441
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.0441
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.121
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.0841
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.268
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0441
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0441
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.466
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.0441
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.154
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.0441
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.154
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.0441
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.0441
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0.0841
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.279
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.0441
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0.0441
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.215
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0841
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.0921
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0.316
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.0441
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0.731
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.121
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10625

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.647
MA0003.1	MA0003.1	0.123
MA0004.1	MA0004.1	0.121
MA0006.1	MA0006.1	0.119
MA0007.1	MA0007.1	0.253
MA0009.1	MA0009.1	0.115
MA0014.1	MA0014.1	0.988
MA0017.1	MA0017.1	0.799
MA0018.2	MA0018.2	0.87
MA0019.1	MA0019.1	0.0234
MA0024.1	MA0024.1	0.0494
MA0025.1	MA0025.1	0.0874
MA0027.1	MA0027.1	0.629
MA0028.1	MA0028.1	1.65541e-8
MA0029.1	MA0029.1	0.247
MA0030.1	MA0030.1	2.55577e-6
MA0031.1	MA0031.1	1.67065e-4
MA0035.2	MA0035.2	0.797
MA0038.1	MA0038.1	0.929
MA0039.2	MA0039.2	0.0575
MA0040.1	MA0040.1	0.31
MA0041.1	MA0041.1	0.0854
MA0042.1	MA0042.1	0.124
MA0043.1	MA0043.1	0.619
MA0046.1	MA0046.1	0.00112
MA0047.2	MA0047.2	1.73008e-7
MA0048.1	MA0048.1	0.00892
MA0050.1	MA0050.1	8.53737e-7
MA0051.1	MA0051.1	6.92266e-4
MA0052.1	MA0052.1	4.67961e-4
MA0055.1	MA0055.1	9.80005e-4
MA0057.1	MA0057.1	0.817
MA0058.1	MA0058.1	0.0798
MA0059.1	MA0059.1	0.0119
MA0060.1	MA0060.1	0.169
MA0061.1	MA0061.1	0.356
MA0062.2	MA0062.2	1.83256e-8
MA0065.2	MA0065.2	0.226
MA0066.1	MA0066.1	0.149
MA0067.1	MA0067.1	0.719
MA0068.1	MA0068.1	2.8024e-4
MA0069.1	MA0069.1	0.681
MA0070.1	MA0070.1	0.293
MA0071.1	MA0071.1	0.0548
MA0072.1	MA0072.1	0.194
MA0073.1	MA0073.1	0.958
MA0074.1	MA0074.1	0.936
MA0076.1	MA0076.1	6.54783e-10
MA0077.1	MA0077.1	0.899
MA0078.1	MA0078.1	0.168
MA0079.2	MA0079.2	0.0645
MA0080.2	MA0080.2	6.61508e-7
MA0081.1	MA0081.1	0.28
MA0083.1	MA0083.1	0.00395
MA0084.1	MA0084.1	0.771
MA0087.1	MA0087.1	0.138
MA0088.1	MA0088.1	8.23498e-4
MA0090.1	MA0090.1	0.0743
MA0091.1	MA0091.1	0.838
MA0092.1	MA0092.1	0.954
MA0093.1	MA0093.1	0.105
MA0099.2	MA0099.2	1.65037e-6
MA0100.1	MA0100.1	0.812
MA0101.1	MA0101.1	0.871
MA0102.2	MA0102.2	0.00168
MA0103.1	MA0103.1	0.268
MA0104.2	MA0104.2	0.00118
MA0105.1	MA0105.1	0.00825
MA0106.1	MA0106.1	0.0375
MA0107.1	MA0107.1	0.973
MA0108.2	MA0108.2	1.08349e-16
MA0111.1	MA0111.1	0.616
MA0112.2	MA0112.2	0.813
MA0113.1	MA0113.1	0.186
MA0114.1	MA0114.1	0.149
MA0115.1	MA0115.1	0.565
MA0116.1	MA0116.1	0.0395
MA0117.1	MA0117.1	0.304
MA0119.1	MA0119.1	0.67
MA0122.1	MA0122.1	0.0993
MA0124.1	MA0124.1	0.84
MA0125.1	MA0125.1	0.904
MA0131.1	MA0131.1	0.117
MA0135.1	MA0135.1	0.692
MA0136.1	MA0136.1	9.76517e-4
MA0137.2	MA0137.2	1.38105e-4
MA0138.2	MA0138.2	0.54
MA0139.1	MA0139.1	0.541
MA0140.1	MA0140.1	0.983
MA0141.1	MA0141.1	0.0542
MA0142.1	MA0142.1	0.359
MA0143.1	MA0143.1	0.437
MA0144.1	MA0144.1	0.0026
MA0145.1	MA0145.1	0.0225
MA0146.1	MA0146.1	0.532
MA0147.1	MA0147.1	1.85274e-4
MA0148.1	MA0148.1	8.25543e-6
MA0149.1	MA0149.1	0.115
MA0150.1	MA0150.1	0.0783
MA0152.1	MA0152.1	0.959
MA0153.1	MA0153.1	5.57892e-7
MA0154.1	MA0154.1	0.986
MA0155.1	MA0155.1	0.526
MA0156.1	MA0156.1	0.202
MA0157.1	MA0157.1	0.0164
MA0159.1	MA0159.1	0.803
MA0160.1	MA0160.1	0.385
MA0162.1	MA0162.1	0.929
MA0163.1	MA0163.1	5.86178e-6
MA0164.1	MA0164.1	0.0827
MA0258.1	MA0258.1	0.232
MA0259.1	MA0259.1	0.0102

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10625

Novel motif	Logo	P-value
1	1	0.0917
10	10	0.0122
100	100	0.189
101	101	0.658
102	102	0.838
103	103	0.449
104	104	0.975
105	105	0.417
106	106	0.16
107	107	0.0393
108	108	0.92
109	109	0.239
11	11	0.236
110	110	0.313
111	111	0.0858
112	112	0.711
113	113	0.834
114	114	0.0381
115	115	0.248
116	116	0.158
117	117	0.0293
118	118	0.0386
119	119	0.208
12	12	0.611
120	120	0.0339
121	121	0.471
122	122	0.655
123	123	0.0135
124	124	0.816
125	125	0.165
126	126	0.192
127	127	0.935
128	128	0.33
129	129	0.0187
13	13	0.338
130	130	0.424
131	131	0.0548
132	132	0.456
133	133	0.0548
134	134	0.237
135	135	0.0286
136	136	0.776
137	137	0.256
138	138	0.998
139	139	0.336
14	14	0.727
140	140	0.0552
141	141	0.23
142	142	0.373
143	143	0.413
144	144	0.589
145	145	0.553
146	146	0.243
147	147	0.808
148	148	0.444
149	149	0.332
15	15	0.421
150	150	0.863
151	151	0.873
152	152	0.0344
153	153	0.642
154	154	0.479
155	155	0.385
156	156	0.994
157	157	0.591
158	158	0.527
159	159	0.852
16	16	0.951
160	160	0.941
161	161	0.348
162	162	0.983
163	163	0.701
164	164	0.0169
165	165	0.0131
166	166	0.587
167	167	0.00482
168	168	0.15
169	169	0.693
17	17	0.958
18	18	0.0805
19	19	0.37
2	2	0.0707
20	20	0.127
21	21	0.454
22	22	0.593
23	23	0.0823
24	24	0.618
25	25	0.466
26	26	0.393
27	27	0.635
28	28	0.889
29	29	0.0289
3	3	0.276
30	30	0.0237
31	31	0.999
32	32	0.68
33	33	0.517
34	34	0.168
35	35	0.203
36	36	0.0759
37	37	0.441
38	38	0.941
39	39	0.11
4	4	0.0958
40	40	0.452
41	41	0.518
42	42	0.366
43	43	0.685
44	44	0.861
45	45	0.0971
46	46	0.306
47	47	0.176
48	48	0.245
49	49	0.211
5	5	0.838
50	50	0.569
51	51	0.812
52	52	0.0428
53	53	0.697
54	54	0.908
55	55	0.47
56	56	0.99
57	57	0.0347
58	58	0.798
59	59	0.343
6	6	0.483
60	60	0.19
61	61	0.694
62	62	0.587
63	63	0.997
64	64	0.287
65	65	0.745
66	66	0.0449
67	67	0.753
68	68	0.567
69	69	0.852
7	7	0.861
70	70	0.0642
71	71	0.109
72	72	0.282
73	73	0.974
74	74	0.761
75	75	0.00565
76	76	0.0402
77	77	0.177
78	78	0.294
79	79	0.891
8	8	0.47
80	80	0.0178
81	81	0.541
82	82	0.689
83	83	0.284
84	84	0.862
85	85	0.343
86	86	0.639
87	87	0.741
88	88	0.944
89	89	0.734
9	9	0.165
90	90	0.0534
91	91	0.738
92	92	0.705
93	93	0.0492
94	94	0.192
95	95	0.286
96	96	0.755
97	97	0.593
98	98	0.155
99	99	0.855

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10625

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010019 human lung - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002048 (lung)
0002100 (trunk)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000117 (respiratory tube)
0000171 (respiration organ)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010019 (human lung - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr4:57547454..57547469,-!p1@HOPX!2.97!935.35!HOPX;;chr6:134210243..134210257,+!p1@TCF21!2.53!341.61!TCF21;;chr11:47400078..47400106,-!p1@SPI1!2.16!144.38!SPI1;;chr16:86544113..86544145,+!p1@FOXF1!1.97!113.84!FOXF1;;chr8:10588010..10588030,-!p1@SOX7!1.97!93.33!SOX7;;chr19:46801639..46801699,+!p1@HIF3A!1.81!63.22!HIF3A;;chr1:201979703..201979721,+!p2@ELF3!1.80!62.36!ELF3;;chr20:62680984..62680999,-!p1@SOX18!1.77!75.29!SOX18;;chr11:34642612..34642646,+!p1@EHF!1.72!51.26!EHF;;chr21:39870339..39870443,-!p1@ERG!1.66!45.17!ERG;;chr2:68592406..68592424,+!p1@PLEK!1.64!43.14!PLEK;;chr3:128212033..128212051,-!p1@GATA2!1.62!40.90!GATA2;;chr17:59529743..59529798,+!p1@TBX4!1.61!40.05!TBX4;;chr2:46524537..46524553,+!p1@EPAS1!1.59!3492.06!EPAS1;;chr16:85932760..85932775,+!p1@IRF8!1.59!38.02!IRF8;;chr1:40105299..40105326,-!p1@HEYL!1.58!37.16!HEYL;;chr5:2751762..2751784,-!p1@IRX2!1.56!35.67!IRX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.55!49.02!ZBTB16;;chr1:201979743..201979762,+!p1@ELF3!1.55!34.49!ELF3;;chr18:53068911..53068935,-!p4@TCF4!1.52!36.52!TCF4;;chr12:52445218..52445237,+!p1@NR4A1!1.51!375.89!NR4A1;;chr17:6926362..6926377,+!p1@BCL6B!1.50!30.54!BCL6B;;chr11:47400062..47400077,-!p2@SPI1!1.46!27.98!SPI1;;chr8:55370487..55370503,+!p1@SOX17!1.42!25.42!SOX17;;chr17:59477233..59477263,+!p1@TBX2!1.41!75.50!TBX2;;chr12:52437488..52437507,+!p2@NR4A1!1.40!24.35!NR4A1;;chr3:12330560..12330579,+!p1@PPARG!1.38!26.48!PPARG;;chr7:115670804..115670825,-!p1@TFEC!1.36!21.89!TFEC;;chr11:113930291..113930339,+!p2@ZBTB16!1.35!34.28!ZBTB16;;chr11:61520075..61520136,+!p1@C11orf9!1.34!43.89!C11orf9;;chr17:74137321..74137337,-!p1@FOXJ1!1.34!21.04!FOXJ1;;chr3:169381420..169381535,-!p1@MECOM!1.33!23.71!MECOM;;chr5:71803177..71803255,-!p1@ZNF366!1.32!19.97!ZNF366;;chrX:106960285..106960299,-!p1@TSC22D3!1.31!500.51!TSC22D3;;chr20:22564895..22564910,-!p1@FOXA2!1.30!18.79!FOXA2;;chr9:102584159..102584174,+!p2@NR4A3!1.29!33.10!NR4A3;;chr14:74256787..74256858,-!p6@C14orf43!1.29!18.58!C14orf43;;chr20:39317868..39317884,-!p1@MAFB!1.27!202.90!MAFB;;chr7:15726296..15726315,-!p1@MEOX2!1.25!16.98!MEOX2;;chr6:106546808..106546833,+!p3@PRDM1!1.24!20.72!PRDM1;;chr17:59477197..59477212,+!p2@TBX2!1.23!27.34!TBX2;;chr2:46524865..46524870,+!p9@EPAS1!1.23!18.58!EPAS1;;chr13:72441315..72441454,-!p1@DACH1!1.21!30.22!DACH1;;chr5:2751785..2751808,-!p2@IRX2!1.21!15.06!IRX2;;chr1:209979467..209979494,-!p1@IRF6!1.20!16.55!IRF6;;chr12:54778471..54778528,-!p1@ZNF385A!1.20!14.74!ZNF385A;;chr1:25256756..25256774,-!p1@RUNX3!1.18!26.27!RUNX3;;chr15:42749722..42749739,-!p2@ZFP106!1.17!24.67!ZFP106;;chr7:14028488..14028516,-!p2@ETV1!1.17!15.38!ETV1;;chr19:16435625..16435682,+!p1@KLF2!1.16!427.36!KLF2;;chr9:73028814..73028895,-!p1@KLF9!1.15!127.40!KLF9;;chr10:35484053..35484076,+!p1@CREM!1.15!32.57!CREM;;chr7:27183291..27183324,-!p1@HOXA5!1.15!13.03!HOXA5;;chr2:46524897..46524911,+!p2@EPAS1!1.14!35.77!EPAS1;;chr2:122042770..122042785,-!p1@TFCP2L1!1.14!12.92!TFCP2L1;;chr17:59477275..59477286,+!p3@TBX2!1.13!16.77!TBX2;;chr17:53342311..53342400,+!p1@HLF!1.13!14.20!HLF;;chr18:53177984..53178004,-!p17@TCF4!1.12!12.07!TCF4;;chr5:88178983..88179012,-!p1@MEF2C!1.10!90.77!MEF2C;;chr6:126240380..126240430,+!p2@NCOA7!1.10!29.90!NCOA7;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.64!ZBTB16;;chr2:70142232..70142251,+!p1@MXD1!1.09!64.07!MXD1;;chr6:1389789..1389821,+!p1@FOXF2!1.09!15.59!FOXF2;;chr6:19837592..19837621,+!p1@ID4!1.08!67.17!ID4;;chr7:15726243..15726293,-!p2@MEOX2!1.08!11.11!MEOX2;;chr22:41763452..41763466,+!p2@TEF!1.08!11.00!TEF;;chr14:38064429..38064486,-!p1@FOXA1!1.08!10.89!FOXA1;;chr19:33793430..33793447,-!p1@CEBPA!1.07!45.28!CEBPA;;chr6:126240442..126240459,+!p4@NCOA7!1.07!13.88!NCOA7;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.68!KDM5D;;chr6:391743..391759,+!p1@IRF4!1.06!10.47!IRF4;;chr18:19749541..19749557,+!p1@GATA6!1.05!32.68!GATA6;;chr2:145277882..145277967,-!p3@ZEB2!1.04!17.51!ZEB2;;chr3:126076242..126076257,-!p1@KLF15!1.03!12.07!KLF15;;chr14:36988564..36988601,-!p7@NKX2-1!1.03!9.82!NKX2-1;;chr3:27763807..27763822,-!p1@EOMES!1.03!9.72!EOMES;;chr19:54041669..54041697,+!p2@ZNF331!1.03!9.61!ZNF331;;chr22:38597987..38598021,+!p2@MAFF!1.02!58.41!MAFF;;chr16:79634624..79634642,-!p1@MAF!1.02!37.91!MAF;;chr11:47279504..47279563,+!p1@NR1H3!1.02!21.57!NR1H3;;chr2:192015701..192015743,-!p1@STAT4!1.02!13.13!STAT4;;chr19:54058073..54058088,+!p1@ZNF331!1.02!9.40!ZNF331;;chr2:19558373..19558392,-!p1@OSR1!1.01!25.74!OSR1;;chr1:10754477..10754517,-!p1@CASZ1!1.01!15.70!CASZ1;;chr6:1312325..1312340,+!p1@FOXQ1!1.01!15.16!FOXQ1;;chr7:27183263..27183284,-!p2@HOXA5!1.01!9.18!HOXA5;;chr3:39195075..39195088,-!p1@CSRNP1!1.00!58.31!CSRNP1;;chr5:92918919..92918942,+!p1@NR2F1!1.00!41.01!NR2F1;;chr11:128392273..128392308,-!p2@ETS1!1.00!39.08!ETS1;;chr8:80679993..80680011,-!p1@HEY1!0.99!12.92!HEY1;;chr3:126076264..126076305,-!p2@KLF15!0.99!12.49!KLF15;;chr11:111249993..111250006,-!p1@POU2AF1!0.99!8.76!POU2AF1;;chr2:46524878..46524891,+!p3@EPAS1!0.98!15.27!EPAS1;;chr20:50159198..50159299,-!p1@NFATC2!0.98!12.49!NFATC2;;chr11:47399996..47400014,-!p4@SPI1!0.98!8.54!SPI1;;chr14:36989940..36989957,-!p2@NKX2-1!0.98!8.54!NKX2-1;;chr12:115122318..115122331,-!p2@TBX3!0.97!8.44!TBX3;;chr4:149363494..149363543,-!p1@NR3C2!0.97!8.44!NR3C2;;chr7:50344289..50344323,+!p1@IKZF1!0.97!8.33!IKZF1;;chr7:44143925..44143970,+!p1@AEBP1!0.96!184.74!AEBP1;;chr11:125034640..125034655,+!p1@PKNOX2!0.96!8.22!PKNOX2;;chr15:66994523..66994541,+!p5@SMAD6!0.96!8.22!SMAD6;;chr17:45810594..45810608,+!p1@TBX21!0.96!8.22!TBX21;;chr8:102504651..102504683,+!p1@GRHL2!0.96!8.12!GRHL2;;chr11:47400032..47400043,-!p5@SPI1!0.95!7.90!SPI1;;chr8:48650715..48650735,-!p1@CEBPD!0.94!1024.84!CEBPD;;chr1:170632285..170632309,+!p1@PRRX1!0.94!8.86!PRRX1;;chr2:61108695..61108753,+!p1@REL!0.93!53.61!REL;;chr1:151804244..151804310,-!p1@RORC!0.93!7.58!RORC;;chr18:53177899..53177918,-!p33@TCF4!0.93!7.58!TCF4;;chr14:35872453..35872485,-!p2@NFKBIA!0.92!18.79!NFKBIA;;chr7:50343634..50343717,+!p2@IKZF1!0.92!7.37!IKZF1;;chr17:80797886..80797906,-!p1@ZNF750!0.92!7.26!ZNF750;;chr2:145277640..145277771,-!p1@ZEB2!0.91!99.85!ZEB2;;chr13:41240737..41240787,-!p1@FOXO1!0.91!88.85!FOXO1;;chr18:52989031..52989079,-!p2@TCF4!0.91!17.30!TCF4;;chr3:168865194..168865245,-!p3@MECOM!0.91!9.29!MECOM;;chr2:180610565..180610578,-!p9@ZNF385B!0.91!7.05!ZNF385B;;chr15:60884706..60884743,-!p1@RORA!0.90!37.16!RORA;;chr6:126240356..126240379,+!p7@NCOA7!0.90!8.54!NCOA7;;chr16:79633894..79633954,-!p3@MAF!0.89!13.56!MAF;;chr10:31288398..31288455,-!p2@ZNF438!0.89!7.90!ZNF438;;chr9:110252035..110252057,-!p1@KLF4!0.88!112.55!KLF4;;chr12:26277956..26277980,-!p1@BHLHE41!0.88!24.88!BHLHE41;;chr16:54320617..54320643,-!p3@IRX3!0.88!8.54!IRX3;;chr17:37934365..37934387,-!p2@IKZF3!0.88!6.62!IKZF3;;chr4:149363475..149363492,-!p2@NR3C2!0.88!6.62!NR3C2;;chr13:73633131..73633149,+!p1@KLF5!0.87!72.51!KLF5;;chr2:97202480..97202499,+!p1@ARID5A!0.87!68.02!ARID5A;;chr3:71179699..71179744,-!p2@FOXP1!0.87!50.83!FOXP1;;chr19:45252008..45252024,+!p2@BCL3!0.87!22.00!BCL3;;chr18:19749386..19749404,+!p2@GATA6!0.87!9.40!GATA6;;chr13:72441506..72441562,-!p3@DACH1!0.87!6.41!DACH1;;chr14:36989427..36989442,-!p1@NKX2-1!0.87!6.41!NKX2-1;;chr1:212782094..212782109,+!p1@ATF3!0.86!182.39!ATF3;;chr15:96873984..96873999,+!p3@NR2F2!0.86!49.12!NR2F2;;chr2:157189180..157189290,-!p1@NR4A2!0.86!34.81!NR4A2;;chr18:19749517..19749531,+!p3@GATA6!0.86!11.64!GATA6;;chr7:14028743..14028799,-!p3@ETV1!0.86!8.01!ETV1;;chr2:231090433..231090469,+!p1@SP140!0.86!6.30!SP140;;chr2:238592039..238592054,+!p4@LRRFIP1!0.86!6.30!LRRFIP1;;chr3:63953435..63953499,+!p1@ATXN7!0.86!6.30!ATXN7;;chr12:52448338..52448401,+!p7@NR4A1!0.86!6.19!NR4A1;;chr10:51572408..51572454,+!p3@NCOA4!0.85!37.27!NCOA4;;chr17:38256822..38256851,-!p1@NR1D1!0.84!50.19!NR1D1;;chr3:39195037..39195069,-!p2@CSRNP1!0.84!39.30!CSRNP1;;chr11:46299199..46299233,+!p1@CREB3L1!0.84!32.25!CREB3L1;;chr9:117150254..117150271,-!p1@AKNA!0.84!16.87!AKNA;;chr3:114819124..114819200,-!p3@ZBTB20!0.84!14.31!ZBTB20;;chr1:158969752..158969780,+!p6@IFI16!0.84!10.79!IFI16;;chr19:45260775..45260838,+!p5@BCL3!0.84!7.90!BCL3;;chr1:170632959..170632987,+!p4@PRRX1!0.84!6.51!PRRX1;;chr17:36105042..36105060,-!p1@HNF1B!0.84!5.98!HNF1B;;chr19:16435705..16435726,+!p3@KLF2!0.84!5.98!KLF2;;chr11:128457446..128457461,-!p4@ETS1!0.84!5.87!ETS1;;chr7:14029283..14029311,-!p1@ETV1!0.83!33.21!ETV1;;chr15:66994663..66994680,+!p1@SMAD6!0.83!14.52!SMAD6;;chr16:79634595..79634620,-!p2@MAF!0.83!10.89!MAF;;chr2:180427261..180427297,-!p6@ZNF385B!0.83!5.77!ZNF385B;;chr3:128206762..128206781,-!p2@GATA2!0.82!37.70!GATA2;;chr14:35872962..35873025,-!p3@NFKBIA!0.82!15.06!NFKBIA;;chr18:53257001..53257015,-!p5@TCF4!0.82!10.14!TCF4;;chr2:85981107..85981120,+!p3@ATOH8!0.82!5.66!ATOH8;;chr14:75745523..75745537,+!p1@FOS!0.81!713.13!FOS;;chrX:131623044..131623089,-!p1@MBNL3!0.81!24.13!MBNL3;;chrX:106960221..106960236,-!p3@TSC22D3!0.81!15.91!TSC22D3;;chr16:54320646..54320672,-!p2@IRX3!0.81!8.54!IRX3;;chr12:54694758..54694805,-!p1@NFE2!0.81!6.73!NFE2;;chr12:24715376..24715432,-!p1@SOX5!0.80!6.83!SOX5;;chr11:128563948..128564003,+!p1@FLI1!0.79!67.28!FLI1;;chr1:204042233..204042249,+!p1@SOX13!0.79!35.56!SOX13;;chr9:73029219..73029289,-!p2@KLF9!0.79!16.87!KLF9;;chr17:38256799..38256815,-!p3@NR1D1!0.79!9.72!NR1D1;;chr5:92919100..92919135,+!p3@NR2F1!0.79!6.41!NR2F1;;chr13:72441074..72441172,-!p2@DACH1!0.79!5.23!DACH1;;chr11:34645791..34645836,+!p3@EHF!0.79!5.13!EHF;;chr14:35873947..35873965,-!p1@NFKBIA!0.78!348.23!NFKBIA;;chr5:88179017..88179046,-!p2@MEF2C!0.78!21.57!MEF2C;;chr6:106534192..106534224,+!p1@PRDM1!0.78!15.06!PRDM1;;chr8:93107451..93107468,-!p2@RUNX1T1!0.78!5.02!RUNX1T1;;chr13:41240717..41240735,-!p2@FOXO1!0.77!36.09!FOXO1;;chr3:187463179..187463201,-!p2@BCL6!0.77!21.78!BCL6;;chr8:106330656..106330684,+!p1@ZFPM2!0.77!13.78!ZFPM2;;chr6:106534230..106534254,+!p2@PRDM1!0.77!13.13!PRDM1;;chr1:170633348..170633399,+!p2@PRRX1!0.77!6.94!PRRX1;;chr14:75988771..75988826,+!p1@BATF!0.77!6.73!BATF;;chr5:122424918..1224249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HLHE41;;chr13:37494306..37494324,-!p4@SMAD9!0.36!1.28!SMAD9;;chr16:54320127..54320148,-!p6@IRX3!0.36!1.28!IRX3;;chr18:53089493..53089517,-!p15@TCF4!0.36!1.28!TCF4;;chr18:53253297..53253322,-!p30@TCF4!0.36!1.28!TCF4;;chr9:73028447..73028458,-!p13@KLF9!0.36!1.28!KLF9;;chr9:3525848..3525863,-!p6@RFX3!0.36!1.28!RFX3;;chr2:113999360..113999386,-!p4@PAX8!0.36!1.28!PAX8;;chr2:85980768..85980783,+!p10@ATOH8!0.36!1.28!ATOH8;;chr3:114819101..114819121,-!p7@ZBTB20!0.36!1.28!ZBTB20;;chr3:141150883..141150961,+!p6@ZBTB38!0.36!1.28!ZBTB38;;chr3:181429741..181429767,+!p2@SOX2!0.36!1.28!SOX2;;chr4:149363637..149363651,-!p4@NR3C2!0.36!1.28!NR3C2;;chr5:3595961..3595975,+!p3@IRX1!0.36!1.28!IRX1;;chr7:27183114..27183138,-!p3@HOXA5!0.36!1.28!HOXA5;;chr8:106330515..106330525,+!p6@ZFPM2!0.36!1.28!ZFPM2;;chr1:25256439..25256476,-!p3@RUNX3!0.36!1.28!RUNX3;;chr1:26697243..26697258,-!p1@ZNF683!0.36!1.28!ZNF683;;chr1:78050720..78050734,-!p9@ZZZ3!0.36!1.28!ZZZ3;;chr8:103667935..103667960,-!p1@KLF10!0.35!90.13!KLF10;;chr19:13106214..13106382,+!p1@NFIX!0.35!46.24!NFIX;;chr7:137686824..137686865,-!p2@CREB3L2!0.35!25.10!CREB3L2;;chr14:90085458..90085557,-!p1@FOXN3!0.35!20.93!FOXN3;;chr4:87856191..87856208,+!p2@AFF1!0.35!15.70!AFF1;;chr1:167190091..167190156,+!p1@POU2F1!0.35!15.38!POU2F1;;chr7:17338324..17338341,+!p3@AHR!0.35!6.09!AHR;;chr11:12696002..12696022,+!p2@TEAD1!0.35!4.27!TEAD1;;chr16:73092963..73093001,-!p2@ZFHX3!0.35!3.84!ZFHX3;;chr19:37341160..37341194,-!p2@ZNF790!0.35!3.63!ZNF790;;chr7:1570388..1570418,+!p2@MAFK!0.35!3.63!MAFK;;chr11:615570..615721,-!p2@IRF7!0.35!3.31!IRF7;;chr19:12405606..12405629,-!p2@ZNF44!0.35!3.20!ZNF44;;chr5:178368186..178368238,+!p1@ZNF454!0.35!2.88!ZNF454;;chr12:46123273..46123329,+!p3@ARID2!0.35!2.78!ARID2;;chr19:45261550..45261641,+!p6@BCL3!0.35!2.67!BCL3;;chr1:158985493..158985535,+!p4@IFI16!0.35!2.35!IFI16;;chr19:18391708..18391737,-!p7@JUND!0.35!2.35!JUND;;chr9:14313893..14313908,-!p7@NFIB!0.35!2.14!NFIB;;chr17:38256858..38256866,-!p6@NR1D1!0.35!1.92!NR1D1;;chr2:10091815..10091864,+!p1@GRHL1!0.35!1.92!GRHL1;;chr3:71632811..71632825,-!p19@FOXP1!0.35!1.92!FOXP1;;chr3:71631151..71631194,-!p15@FOXP1!0.35!1.50!FOXP1;;chr9:77112244..77112262,+!p1@RORB!0.35!1.50!RORB;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.34!18.37!ZNF595;;chr6:157098775..157098820,+!p1@ARID1B!0.34!16.66!ARID1B;;chr19:12662240..12662310,-!p1@ZNF564,p1@ZNF709!0.34!14.95!ZNF564;;chr2:148778590..148778647,+!p2@MBD5!0.34!14.52!MBD5;;chr16:1464688..1464728,-!p1@UNKL!0.34!13.03!UNKL;;chr14:74253865..74253917,-!p2@C14orf43!0.34!11.96!C14orf43;;chr10:104154246..104154347,+!p3@NFKB2!0.34!11.64!NFKB2;;chrX:83757450..83757485,-!p1@HDX!0.34!7.80!HDX;;chr21:27107672..27107698,+!p2@GABPA!0.34!7.69!GABPA;;chr12:57504975..57505019,-!p2@STAT6!0.34!7.37!STAT6;;chr12:54019757..54019804,-!p2@ATF7!0.34!6.94!ATF7;;chr1:161736140..161736151,+!p3@ATF6!0.34!5.55!ATF6;;chr9:137217986..137218049,+!p3@RXRA!0.34!5.02!RXRA;;chr2:178128250..178128293,-!p6@NFE2L2!0.34!4.27!NFE2L2;;chr8:48650982..48651023,-!p3@CEBPD!0.34!4.27!CEBPD;;chr4:57774018..57774040,+!p3@REST!0.34!3.84!REST;;chr19:52674898..52674931,-!p3@ZNF836!0.34!3.63!ZNF836;;chr1:61547781..61547809,+!p5@NFIA!0.34!3.31!NFIA;;chr20:39946400..39946423,-!p3@ZHX3!0.34!2.88!ZHX3;;chr15:31619535..31619569,+!p5@KLF13!0.34!2.88!KLF13;;chr11:46299539..46299620,+!p2@CREB3L1!0.34!2.56!CREB3L1;;chr1:61547811..61547837,+!p7@NFIA!0.34!2.14!NFIA;;chr8:60031762..60031803,-!p3@TOX!0.34!2.14!TOX;;chr19:45972701..45972774,+!p2@FOSB!0.34!1.92!FOSB;;chr9:73029018..73029042,-!p6@KLF9!0.34!1.82!KLF9;;chr9:73029044..73029056,-!p10@KLF9!0.34!1.17!KLF9;;chr20:22566120..22566136,-!p4@FOXA2!0.34!1.17!FOXA2;;chr20:56195525..56195556,-!p2@ZBP1!0.34!1.17!ZBP1;;chr11:100999802..100999819,-!p4@PGR!0.34!1.17!PGR;;chr11:128391908..128391913,-!p18@ETS1!0.34!1.17!ETS1;;chr12:3068668..3068689,+!p7@TEAD4!0.34!1.17!TEAD4;;chr14:36989892..36989908,-!p9@NKX2-1!0.34!1.17!NKX2-1;;chr14:89029904..89029917,+!p5@ZC3H14!0.34!1.17!ZC3H14;;chr16:31076332..31076388,-!p3@ZNF668!0.34!1.17!ZNF668;;chr16:52581025..52581072,-!p1@TOX3!0.34!1.17!TOX3;;chr16:54964899..54964914,+!p2@IRX5!0.34!1.17!IRX5;;chr17:46667628..46667642,-!p2@HOXB3!0.34!1.17!HOXB3;;chr17:53344980..53345011,+!p3@HLF!0.34!1.17!HLF;;chr17:59533618..59533656,+!p2@TBX4!0.34!1.17!TBX4;;chr5:124081979..124082021,-!p7@ZNF608!0.34!1.17!ZNF608;;chr7:15726206..15726217,-!p6@MEOX2!0.34!1.17!MEOX2;;chr21:40181520..40181558,+!p11@ETS2!0.34!1.17!ETS2;;chr2:242556900..242556916,-!p6@THAP4!0.34!1.17!THAP4;;chr2:24714729..24714761,+!p1@NCOA1!0.34!1.17!NCOA1;;chr2:85981008..85981025,+!p7@ATOH8!0.34!1.17!ATOH8;;chr3:168865364..168865376,-!p11@MECOM!0.34!1.17!MECOM;;chr3:168865497..168865516,-!p16@MECOM!0.34!1.17!MECOM;;chr19:3366570..3366619,+!p1@NFIC!0.33!61.08!NFIC;;chr11:118307179..118307223,+!p1@MLL!0.33!59.27!MLL;;chr21:43430440..43430485,-!p1@ZNF295!0.33!26.27!ZNF295;;chr11:130184753..130184824,-!p1@ZBTB44!0.33!25.84!ZBTB44;;chr6:87865262..87865311,+!p1@ZNF292!0.33!25.20!ZNF292;;chr17:36861496..36861586,+!p1@MLLT6!0.33!18.37!MLLT6;;chr19:49865646..49865718,-!p1@TEAD2!0.33!16.02!TEAD2;;chr10:3827371..3827386,-!p2@KLF6!0.33!15.91!KLF6;;chr10:114710098..114710130,+!p2@TCF7L2!0.33!14.10!TCF7L2;;chr2:10183651..10183713,+!p1@KLF11!0.33!13.67!KLF11;;chr1:157108130..157108173,-!p1@ETV3!0.33!13.35!ETV3;;chr1:155532531..155532605,-!p1@ASH1L!0.33!12.60!ASH1L;;chr19:18392274..18392286,-!p3@JUND!0.33!12.07!JUND;;chr5:139493665..139493718,+!p2@PURA!0.33!10.89!PURA;;chr19:19843900..19843928,-!p1@ZNF14!0.33!8.97!ZNF14;;chr5:133450365..133450444,+!p1@TCF7!0.33!8.12!TCF7;;chr17:56065729..56065781,-!p2@VEZF1!0.33!7.69!VEZF1;;chr19:12721760..12721778,+!p3@ZNF791!0.33!5.87!ZNF791;;chr18:72922743..72922761,+!p3@TSHZ1!0.33!5.66!TSHZ1;;chr3:150126706..150126754,+!p5@TSC22D2!0.33!5.34!TSC22D2;;chr19:46272106..46272115,-!p3@SIX5!0.33!4.49!SIX5;;chr19:57901326..57901385,+!p2@ZNF548!0.33!3.95!ZNF548;;chr3:126194815..126194848,-!p2@ZXDC!0.33!3.52!ZXDC;;chr19:925727..925784,+!p3@ARID3A!0.33!3.42!ARID3A;;chr19:19729477..19729542,-!p1@PBX4!0.33!3.42!PBX4;;chr12:104531823..104531849,-!p5@NFYB!0.33!3.31!NFYB;;chr9:2016724..2016752,+!p7@SMARCA2!0.33!2.99!SMARCA2;;chr16:8962202..8962222,-!p3@CARHSP1!0.33!2.67!CARHSP1;;chr19:19496539..19496576,+!p8@GATAD2A!0.33!2.67!GATAD2A;;chr18:42260059..42260132,+!p1@SETBP1!0.33!2.46!SETBP1;;chr6:45390300..45390335,+!p4@RUNX2!0.33!2.24!RUNX2;;chr7:6655225..6655279,+!p1@ENST00000457543!0.33!2.14!ZNF853;;chr19:44037334..44037365,+!p2@ZNF575!0.33!2.14!ZNF575;;chr15:96875041..96875052,+!p17@NR2F2!0.33!2.03!NR2F2;;chr2:176033027..176033050,-!p3@ATF2!0.33!1.92!ATF2;;chr12:72056800..72056834,+!p1@THAP2!0.33!1.82!THAP2;;chr1:8484007..8484061,-!p13@RERE!0.33!1.71!RERE;;chr17:40440225..40440268,+!p3@STAT5A!0.33!1.71!STAT5A;;chr9:128510454..128510469,+!p3@PBX3!0.33!1.71!PBX3;;chr19:57183114..57183145,-!p1@ZNF835!0.33!1.39!ZNF835;;chr12:3068957..3068978,+!p6@TEAD4!0.33!1.39!TEAD4;;chr18:46475696..46475713,-!p1@SMAD7!0.33!1.39!SMAD7;;chr14:75894714..75894733,+!p1@JDP2!0.32!52.65!JDP2;;chr20:46130619..46130664,+!p1@NCOA3!0.32!50.94!NCOA3;;chr12:12764773..12764852,+!p1@CREBL2!0.32!47.63!CREBL2;;chr4:26322616..26322652,+!p1@RBPJ!0.32!41.01!RBPJ;;chr7:139762641..139762768,-!p1@PARP12!0.32!25.20!PARP12;;chr12:125052112..125052172,-!p2@NCOR2!0.32!16.77!NCOR2;;chr8:28243661..28243709,-!p1@ZNF395!0.32!10.25!ZNF395;;chr19:12175535..12175554,+!p1@ZNF844!0.32!9.82!ZNF844;;chr16:30583017..30583064,-!p1@ZNF688!0.32!9.08!ZNF688;;chr13:41635285..41635356,-!p3@ELF1!0.32!7.05!ELF1;;chr14:61116183..61116208,-!p1@SIX1!0.32!6.51!SIX1;;chr5:158526917..158526932,-!p1@EBF1!0.32!3.95!EBF1;;chr19:35455110..35455149,-!p1@ZNF792!0.32!2.88!ZNF792;;chr17:41277479..41277510,-!p5@BRCA1!0.32!1.82!BRCA1;;chr19:12444491..12444517,-!p4@ZNF563!0.32!1.82!ZNF563;;chr10:111987079..111987115,+!p3@MXI1!0.32!1.82!MXI1;;chrX:66763815..66763854,+!p2@AR!0.32!1.71!AR;;chr4:103422232..103422241,+!p6@NFKB1!0.32!1.50!NFKB1;;chr10:31607702..31607755,+!p3@ZEB1!0.32!1.39!ZEB1;;chr3:71179785..71179810,-!p23@FOXP1!0.32!1.28!FOXP1;;chr21:40191431..40191450,+!p7@ETS2!0.32!1.07!ETS2;;chr22:24093154..24093183,-!p2@ZNF70!0.32!1.07!ZNF70;;chr2:180427245..180427256,-!p12@ZNF385B!0.32!1.07!ZNF385B;;
+|ffid_belonging_in_development=UBERON:0001041,UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=

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Revision as of 17:54, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0