FF:10158-103A5: Difference between revisions
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase=1 | |||
|def= | |def= | ||
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.81!650.91!TSC22D4;;chr22:38380543..38380569,-!p1@SOX10!2.53!339.28!SOX10;;chr21:34442439..34442455,+!p1@OLIG1!2.45!277.65!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.33!437.62!C11orf9;;chr8:53322304..53322340,-!p1@ST18!2.29!193.08!ST18;;chr10:134599649..134599653,-!p1@NKX6-2!2.12!129.87!NKX6-2;;chr2:145277882..145277967,-!p3@ZEB2!1.93!141.19!ZEB2;;chr16:1031762..1031781,+!p1@SOX8!1.91!80.27!SOX8;;chr10:48355030..48355090,+!p1@ZNF488!1.87!93.17!ZNF488;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.87!73.96!POU3F3;;chr8:53322347..53322378,-!p2@ST18!1.86!71.67!ST18;;chr21:34398234..34398250,+!p1@OLIG2!1.85!70.38!OLIG2;;chr3:181429704..181429722,+!p1@SOX2!1.81!64.22!SOX2;;chr12:26277817..26277863,-!p2@BHLHE41!1.80!82.71!BHLHE41;;chr12:26277956..26277980,-!p1@BHLHE41!1.74!184.33!BHLHE41;;chr21:34442540..34442560,+!p2@OLIG1!1.74!54.33!OLIG1;;chr11:113930425..113930471,+!p1@ZBTB16!1.71!71.96!ZBTB16;;chr19:46801639..46801699,+!p1@HIF3A!1.67!46.01!HIF3A;;chr11:47400078..47400106,-!p1@SPI1!1.60!38.42!SPI1;;chr3:126076242..126076257,-!p1@KLF15!1.59!47.30!KLF15;;chr4:81118647..81118666,+!p1@PRDM8!1.56!46.73!PRDM8;;chr16:85932760..85932775,+!p1@IRF8!1.56!35.40!IRF8;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.56!35.26!PEG3;;chr9:114287433..114287513,+!p1@ZNF483!1.54!84.14!ZNF483;;chr1:214161272..214161322,+!p1@PROX1!1.49!41.43!PROX1;;chr12:106976774..106976788,+!p1@RFX4!1.48!29.38!RFX4;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.45!27.23!POU3F3;;chr19:13135386..13135435,+!p4@NFIX!1.44!26.52!NFIX;;chr12:106976678..106976708,+!p2@RFX4!1.41!24.51!RFX4;;chr15:80696703..80696754,+!p1@ARNT2!1.40!31.68!ARNT2;;chr12:54779511..54779577,-!p5@ZNF385A!1.37!22.22!ZNF385A;;chr3:181429741..181429767,+!p2@SOX2!1.35!21.64!SOX2;;chr16:79634624..79634642,-!p1@MAF!1.34!80.70!MAF;;chr19:30863271..30863338,+!p1@ZNF536!1.34!20.78!ZNF536;;chr16:51185172..51185197,-!p1@SALL1!1.32!20.07!SALL1;;chr3:126076264..126076305,-!p2@KLF15!1.31!26.80!KLF15;;chr2:178128250..178128293,-!p6@NFE2L2!1.30!47.02!NFE2L2;;chr7:115670804..115670825,-!p1@TFEC!1.30!18.78!TFEC;;chr19:21512144..21512191,-!p2@ZNF708!1.29!85.00!ZNF708;;chr7:63505799..63505904,+!p1@ZNF727!1.29!18.49!ZNF727;;chr12:26277929..26277955,-!p3@BHLHE41!1.28!25.37!BHLHE41;;chr6:28321971..28321995,-!p1@ZNF323!1.27!17.77!ZNF323;;chr16:51185318..51185348,-!p2@SALL1!1.27!17.49!SALL1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.25!16.91!ZBED1;;chr2:68592406..68592424,+!p1@PLEK!1.24!16.48!PLEK;;chr1:61548069..61548102,+!p3@NFIA!1.23!38.56!NFIA;;chr17:47439437..47439533,-!p1@ZNF652!1.22!124.28!ZNF652;;chr19:13135582..13135600,+!p3@NFIX!1.22!15.48!NFIX;;chr10:64134120..64134183,+!p1@ZNF365!1.21!18.49!ZNF365;;chr19:21512115..21512135,-!p3@ZNF708!1.20!30.53!ZNF708;;chr14:33408072..33408114,+!p2@NPAS3!1.19!17.34!NPAS3;;chr16:67198633..67198671,+!p1@HSF4!1.19!14.33!HSF4;;chr20:21494654..21494678,-!p2@NKX2-2!1.19!14.33!NKX2-2;;chr2:214016314..214016343,-!p2@IKZF2!1.18!23.65!IKZF2;;chr22:41763452..41763466,+!p2@TEF!1.17!13.76!TEF;;chr12:103351444..103351461,+!p1@ASCL1!1.17!13.76!ASCL1;;chr6:19837592..19837621,+!p1@ID4!1.16!82.56!ID4;;chr1:40105299..40105326,-!p1@HEYL!1.16!13.47!HEYL;;chr8:53322411..53322422,-!p6@ST18!1.16!13.33!ST18;;chr2:95963052..95963106,+!p1@KCNIP3!1.15!13.19!KCNIP3;;chr20:50159198..50159299,-!p1@NFATC2!1.14!18.63!NFATC2;;chr3:114343039..114343085,-!p8@ZBTB20!1.14!12.76!ZBTB20;;chr19:21512202..21512225,-!p1@ZNF708!1.13!64.36!ZNF708;;chr3:114343768..114343822,-!p1@ZBTB20!1.13!54.33!ZBTB20;;chr2:177053386..177053402,+!p1@HOXD1!1.13!12.61!HOXD1;;chr19:38085768..38085821,+!p1@ZNF540!1.12!18.20!ZNF540;;chr14:33403881..33403924,+!p1@NPAS3!1.12!12.33!NPAS3;;chr21:39870339..39870443,-!p1@ERG!1.12!12.04!ERG;;chr7:50344289..50344323,+!p1@IKZF1!1.11!11.75!IKZF1;;chr3:187463179..187463201,-!p2@BCL6!1.10!48.45!BCL6;;chr6:41701557..41701578,-!p3@TFEB!1.10!11.47!TFEB;;chr19:53636125..53636178,-!p1@ZNF415!1.09!31.96!ZNF415;;chr16:79634595..79634620,-!p2@MAF!1.09!20.93!MAF;;chr11:113930291..113930339,+!p2@ZBTB16!1.09!18.78!ZBTB16;;chr21:34442584..34442587,+!p3@OLIG1!1.09!11.32!OLIG1;;chr4:26344778..26344807,+!p8@RBPJ!1.09!11.32!RBPJ;;chr2:95963120..95963136,+!p2@KCNIP3!1.09!11.18!KCNIP3;;chr6:126112074..126112144,+!p1@NCOA7!1.08!148.93!NCOA7;;chr2:145275982..145276003,-!p7@ZEB2!1.07!10.75!ZEB2;;chr19:46800289..46800327,+!p2@HIF3A!1.07!10.75!HIF3A;;chr17:38219209..38219230,+!p1@THRA!1.06!137.46!THRA;;chr14:73360799..73360817,-!p1@DPF3!1.06!36.98!DPF3;;chr11:113930401..113930422,+!p3@ZBTB16!1.06!10.61!ZBTB16;;chr16:67198683..67198698,+!p2@HSF4!1.06!10.46!HSF4;;chr6:41701581..41701613,-!p2@TFEB!1.06!10.46!TFEB;;chr6:126070769..126070801,+!p1@HEY2!1.05!11.75!HEY2;;chr8:53322384..53322393,-!p7@ST18!1.05!10.18!ST18;;chr18:52989031..52989079,-!p2@TCF4!1.03!23.08!TCF4;;chr15:42749722..42749739,-!p2@ZFP106!1.03!17.63!ZFP106;;chr2:166326200..166326216,+!p1@CSRNP3!1.03!14.33!CSRNP3;;chr7:28725740..28725778,+!p1@CREB5!1.01!83.14!CREB5;;chr17:17726907..17726958,-!p2@SREBF1!1.01!58.91!SREBF1;;chr11:47400062..47400077,-!p2@SPI1!1.01!9.32!SPI1;;chr12:26277798..26277809,-!p5@BHLHE41!1.01!9.17!BHLHE41;;chr20:21494684..21494708,-!p1@NKX2-2!1.01!9.17!NKX2-2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.00!11.47!L3MBTL4;;chr3:147127142..147127168,+!p1@ZIC1!1.00!8.89!ZIC1;;chr10:48359344..48359376,+!p2@ZNF488!0.98!8.60!ZNF488;;chr14:33403648..33403710,+!p3@NPAS3!0.98!8.60!NPAS3;;chr7:64023441..64023462,-!p1@ZNF680!0.97!68.09!ZNF680;;chr9:14314946..14314983,-!p8@NFIB!0.97!8.31!NFIB;;chrX:70315688..70315709,+!p1@FOXO4!0.96!19.49!FOXO4;;chr18:47814186..47814232,-!p2@CXXC1!0.96!17.20!CXXC1;;chr10:111987079..111987115,+!p3@MXI1!0.96!11.32!MXI1;;chr11:31832658..31832681,-!p1@PAX6!0.96!8.17!PAX6;;chr4:26344754..26344772,+!p10@RBPJ!0.96!8.17!RBPJ;;chr9:1050331..1050363,+!p1@DMRT2!0.96!8.17!DMRT2;;chr3:114819124..114819200,-!p3@ZBTB20!0.95!18.92!ZBTB20;;chr16:86544113..86544145,+!p1@FOXF1!0.95!10.03!FOXF1;;chr6:41701898..41701939,-!p5@TFEB!0.95!7.88!TFEB;;chr11:8102846..8102892,+!p1@TUB!0.94!11.04!TUB;;chr1:61924375..61924380,+!p6@NFIA!0.94!11.04!NFIA;;chr1:170632285..170632309,+!p1@PRRX1!0.94!8.74!PRRX1;;chr17:53342311..53342400,+!p1@HLF!0.93!8.60!HLF;;chr10:64134045..64134083,+!p3@ZNF365!0.93!7.60!ZNF365;;chr12:54778471..54778528,-!p1@ZNF385A!0.93!7.60!ZNF385A;;chr17:70117153..70117174,+!p1@SOX9!0.92!79.27!SOX9;;chr3:114866084..114866118,-!p2@ZBTB20!0.92!27.52!ZBTB20;;chr15:57210961..57211012,+!p3@TCF12!0.92!24.08!TCF12;;chr5:124084493..124084524,-!p2@ZNF608!0.92!16.91!ZNF608;;chr8:80679993..80680011,-!p1@HEY1!0.92!10.75!HEY1;;chr16:79633894..79633954,-!p3@MAF!0.91!14.05!MAF;;chr12:125003087..125003141,-!p4@NCOR2!0.91!9.32!NCOR2;;chr5:71803177..71803255,-!p1@ZNF366!0.91!7.17!ZNF366;;chr7:50343634..50343717,+!p2@IKZF1!0.91!7.17!IKZF1;;chr5:92918919..92918942,+!p1@NR2F1!0.90!32.11!NR2F1;;chr15:57511609..57511651,+!p2@TCF12!0.90!11.90!TCF12;;chr20:2673383..2673441,+!p1@EBF4!0.90!11.18!EBF4;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.90!6.88!ZNF676;;chr5:76383017..76383068,-!p1@ZBED3!0.89!25.80!ZBED3;;chr9:73029219..73029289,-!p2@KLF9!0.89!21.50!KLF9;;chr2:74229812..74229867,+!p1@TET3!0.89!17.49!TET3;;chr15:41913690..41913753,+!p2@MGA!0.89!17.06!MGA;;chr7:86781858..86781879,+!p3@DMTF1!0.89!11.18!DMTF1;;chr7:128577972..128578047,+!p1@IRF5!0.89!10.89!IRF5;;chr16:4323246..4323299,-!p5@TFAP4!0.89!6.74!TFAP4;;chr19:37096139..37096170,-!p2@ZNF529!0.88!19.21!ZNF529;;chr17:7492684..7492778,-!p2@SOX15!0.88!14.48!SOX15;;chr19:57183114..57183145,-!p1@ZNF835!0.88!7.45!ZNF835;;chr11:34654104..34654118,+!p5@EHF!0.88!6.59!EHF;;chr19:13134457..13134462,+!p5@NFIX!0.87!11.90!NFIX;;chr5:178368186..178368238,+!p1@ZNF454!0.87!11.75!ZNF454;;chrX:107018969..107019024,-!p6@TSC22D3!0.87!9.03!TSC22D3;;chr8:30890810..30890880,-!p1@PURG!0.87!6.45!PURG;;chr7:28448965..28448994,+!p2@CREB5!0.86!23.08!CREB5;;chr3:52001396..52001425,-!p4@PCBP4!0.86!11.47!PCBP4;;chr20:62680984..62680999,-!p1@SOX18!0.86!8.46!SOX18;;chr9:77112244..77112262,+!p1@RORB!0.86!7.02!RORB;;chr10:111985777..111985788,+!p4@MXI1!0.86!6.16!MXI1;;chr5:172483347..172483407,+!p1@C5orf41!0.85!48.88!CREBRF;;chr3:52001426..52001447,-!p3@PCBP4!0.85!17.92!PCBP4;;chr5:2751762..2751784,-!p1@IRX2!0.85!6.02!IRX2;;chr5:88178983..88179012,-!p1@MEF2C!0.84!49.17!MEF2C;;chr19:11959532..11959593,+!p1@ZNF439!0.84!23.94!ZNF439;;chr20:51588873..51588953,+!p1@TSHZ2!0.84!8.03!TSHZ2;;chr5:124082322..124082364,-!p1@ZNF608!0.83!15.62!ZNF608;;chr19:57019215..57019250,+!p1@ZNF471!0.83!9.03!ZNF471;;chr1:47697539..47697573,-!p3@TAL1!0.83!5.73!TAL1;;chr6:15401104..15401166,+!p5@JARID2!0.83!5.73!JARID2;;chr8:10588010..10588030,-!p1@SOX7!0.83!5.73!SOX7;;chr2:105470599..105470610,+!p@chr2:105470599..105470610,+!0.83!5.73!POU3F3;;chr12:106976656..106976672,+!p4@RFX4!0.83!5.73!RFX4;;chr19:58446721..58446779,-!p1@ZNF418!0.82!16.34!ZNF418;;chr6:91006518..91006570,-!p1@BACH2!0.82!13.47!BACH2;;chr16:51185439..51185450,-!p8@SALL1!0.82!5.59!SALL1;;chr2:145277640..145277771,-!p1@ZEB2!0.81!78.26!ZEB2;;chrX:101186981..101187030,-!p1@ZMAT1!0.81!18.78!ZMAT1;;chr19:38085633..38085706,-!p1@ZNF571!0.81!15.19!ZNF571;;chrX:107019163..107019179,-!p7@TSC22D3!0.81!6.45!TSC22D3;;chr7:86781916..86781963,+!p2@DMTF1!0.80!24.94!DMTF1;;chr18:22932080..22932170,-!p1@ZNF521!0.80!24.22!ZNF521;;chr8:77593474..77593612,+!p1@ZFHX4!0.80!24.08!ZFHX4;;chr7:64023410..64023428,-!p2@ZNF680!0.80!8.60!ZNF680;;chr7:6655225..6655279,+!p1@ENST00000457543!0.80!8.31!ZNF853;;chr18:53068911..53068935,-!p4@TCF4!0.80!6.02!TCF4;;chr12:24102576..24102623,-!p2@SOX5!0.80!5.30!SOX5;;chr10:38265517..38265591,-!p1@ZNF25!0.79!21.64!ZNF25;;chr19:9879350..9879419,-!p2@ZNF846!0.79!11.75!ZNF846;;chr19:13213662..13213686,-!p1@LYL1!0.79!7.88!LYL1;;chr17:41277479..41277510,-!p5@BRCA1!0.79!7.45!BRCA1;;chr18:56530756..56530774,+!p6@ZNF532!0.79!7.02!ZNF532;;chr12:24715376..24715432,-!p1@SOX5!0.79!6.74!SOX5;;chr1:61548118..61548129,+!p9@NFIA!0.79!5.88!NFIA;;chr12:26276197..26276214,-!p8@BHLHE41!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| |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.81!650.91!TSC22D4;;chr22:38380543..38380569,-!p1@SOX10!2.53!339.28!SOX10;;chr21:34442439..34442455,+!p1@OLIG1!2.45!277.65!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.33!437.62!C11orf9;;chr8:53322304..53322340,-!p1@ST18!2.29!193.08!ST18;;chr10:134599649..134599653,-!p1@NKX6-2!2.12!129.87!NKX6-2;;chr2:145277882..145277967,-!p3@ZEB2!1.93!141.19!ZEB2;;chr16:1031762..1031781,+!p1@SOX8!1.91!80.27!SOX8;;chr10:48355030..48355090,+!p1@ZNF488!1.87!93.17!ZNF488;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.87!73.96!POU3F3;;chr8:53322347..53322378,-!p2@ST18!1.86!71.67!ST18;;chr21:34398234..34398250,+!p1@OLIG2!1.85!70.38!OLIG2;;chr3:181429704..181429722,+!p1@SOX2!1.81!64.22!SOX2;;chr12:26277817..26277863,-!p2@BHLHE41!1.80!82.71!BHLHE41;;chr12:26277956..26277980,-!p1@BHLHE41!1.74!184.33!BHLHE41;;chr21:34442540..34442560,+!p2@OLIG1!1.74!54.33!OLIG1;;chr11:113930425..113930471,+!p1@ZBTB16!1.71!71.96!ZBTB16;;chr19:46801639..46801699,+!p1@HIF3A!1.67!46.01!HIF3A;;chr11:47400078..47400106,-!p1@SPI1!1.60!38.42!SPI1;;chr3:126076242..126076257,-!p1@KLF15!1.59!47.30!KLF15;;chr4:81118647..81118666,+!p1@PRDM8!1.56!46.73!PRDM8;;chr16:85932760..85932775,+!p1@IRF8!1.56!35.40!IRF8;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.56!35.26!PEG3;;chr9:114287433..114287513,+!p1@ZNF483!1.54!84.14!ZNF483;;chr1:214161272..214161322,+!p1@PROX1!1.49!41.43!PROX1;;chr12:106976774..106976788,+!p1@RFX4!1.48!29.38!RFX4;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.45!27.23!POU3F3;;chr19:13135386..13135435,+!p4@NFIX!1.44!26.52!NFIX;;chr12:106976678..106976708,+!p2@RFX4!1.41!24.51!RFX4;;chr15:80696703..80696754,+!p1@ARNT2!1.40!31.68!ARNT2;;chr12:54779511..54779577,-!p5@ZNF385A!1.37!22.22!ZNF385A;;chr3:181429741..181429767,+!p2@SOX2!1.35!21.64!SOX2;;chr16:79634624..79634642,-!p1@MAF!1.34!80.70!MAF;;chr19:30863271..30863338,+!p1@ZNF536!1.34!20.78!ZNF536;;chr16:51185172..51185197,-!p1@SALL1!1.32!20.07!SALL1;;chr3:126076264..126076305,-!p2@KLF15!1.31!26.80!KLF15;;chr2:178128250..178128293,-!p6@NFE2L2!1.30!47.02!NFE2L2;;chr7:115670804..115670825,-!p1@TFEC!1.30!18.78!TFEC;;chr19:21512144..21512191,-!p2@ZNF708!1.29!85.00!ZNF708;;chr7:63505799..63505904,+!p1@ZNF727!1.29!18.49!ZNF727;;chr12:26277929..26277955,-!p3@BHLHE41!1.28!25.37!BHLHE41;;chr6:28321971..28321995,-!p1@ZNF323!1.27!17.77!ZNF323;;chr16:51185318..51185348,-!p2@SALL1!1.27!17.49!SALL1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.25!16.91!ZBED1;;chr2:68592406..68592424,+!p1@PLEK!1.24!16.48!PLEK;;chr1:61548069..61548102,+!p3@NFIA!1.23!38.56!NFIA;;chr17:47439437..47439533,-!p1@ZNF652!1.22!124.28!ZNF652;;chr19:13135582..13135600,+!p3@NFIX!1.22!15.48!NFIX;;chr10:64134120..64134183,+!p1@ZNF365!1.21!18.49!ZNF365;;chr19:21512115..21512135,-!p3@ZNF708!1.20!30.53!ZNF708;;chr14:33408072..33408114,+!p2@NPAS3!1.19!17.34!NPAS3;;chr16:67198633..67198671,+!p1@HSF4!1.19!14.33!HSF4;;chr20:21494654..21494678,-!p2@NKX2-2!1.19!14.33!NKX2-2;;chr2:214016314..214016343,-!p2@IKZF2!1.18!23.65!IKZF2;;chr22:41763452..41763466,+!p2@TEF!1.17!13.76!TEF;;chr12:103351444..103351461,+!p1@ASCL1!1.17!13.76!ASCL1;;chr6:19837592..19837621,+!p1@ID4!1.16!82.56!ID4;;chr1:40105299..40105326,-!p1@HEYL!1.16!13.47!HEYL;;chr8:53322411..53322422,-!p6@ST18!1.16!13.33!ST18;;chr2:95963052..95963106,+!p1@KCNIP3!1.15!13.19!KCNIP3;;chr20:50159198..50159299,-!p1@NFATC2!1.14!18.63!NFATC2;;chr3:114343039..114343085,-!p8@ZBTB20!1.14!12.76!ZBTB20;;chr19:21512202..21512225,-!p1@ZNF708!1.13!64.36!ZNF708;;chr3:114343768..114343822,-!p1@ZBTB20!1.13!54.33!ZBTB20;;chr2:177053386..177053402,+!p1@HOXD1!1.13!12.61!HOXD1;;chr19:38085768..38085821,+!p1@ZNF540!1.12!18.20!ZNF540;;chr14:33403881..33403924,+!p1@NPAS3!1.12!12.33!NPAS3;;chr21:39870339..39870443,-!p1@ERG!1.12!12.04!ERG;;chr7:50344289..50344323,+!p1@IKZF1!1.11!11.75!IKZF1;;chr3:187463179..187463201,-!p2@BCL6!1.10!48.45!BCL6;;chr6:41701557..41701578,-!p3@TFEB!1.10!11.47!TFEB;;chr19:53636125..53636178,-!p1@ZNF415!1.09!31.96!ZNF415;;chr16:79634595..79634620,-!p2@MAF!1.09!20.93!MAF;;chr11:113930291..113930339,+!p2@ZBTB16!1.09!18.78!ZBTB16;;chr21:34442584..34442587,+!p3@OLIG1!1.09!11.32!OLIG1;;chr4:26344778..26344807,+!p8@RBPJ!1.09!11.32!RBPJ;;chr2:95963120..95963136,+!p2@KCNIP3!1.09!11.18!KCNIP3;;chr6:126112074..126112144,+!p1@NCOA7!1.08!148.93!NCOA7;;chr2:145275982..145276003,-!p7@ZEB2!1.07!10.75!ZEB2;;chr19:46800289..46800327,+!p2@HIF3A!1.07!10.75!HIF3A;;chr17:38219209..38219230,+!p1@THRA!1.06!137.46!THRA;;chr14:73360799..73360817,-!p1@DPF3!1.06!36.98!DPF3;;chr11:113930401..113930422,+!p3@ZBTB16!1.06!10.61!ZBTB16;;chr16:67198683..67198698,+!p2@HSF4!1.06!10.46!HSF4;;chr6:41701581..41701613,-!p2@TFEB!1.06!10.46!TFEB;;chr6:126070769..126070801,+!p1@HEY2!1.05!11.75!HEY2;;chr8:53322384..53322393,-!p7@ST18!1.05!10.18!ST18;;chr18:52989031..52989079,-!p2@TCF4!1.03!23.08!TCF4;;chr15:42749722..42749739,-!p2@ZFP106!1.03!17.63!ZFP106;;chr2:166326200..166326216,+!p1@CSRNP3!1.03!14.33!CSRNP3;;chr7:28725740..28725778,+!p1@CREB5!1.01!83.14!CREB5;;chr17:17726907..17726958,-!p2@SREBF1!1.01!58.91!SREBF1;;chr11:47400062..47400077,-!p2@SPI1!1.01!9.32!SPI1;;chr12:26277798..26277809,-!p5@BHLHE41!1.01!9.17!BHLHE41;;chr20:21494684..21494708,-!p1@NKX2-2!1.01!9.17!NKX2-2;;chr18:6414884..6414942,-!p1@L3MBTL4!1.00!11.47!L3MBTL4;;chr3:147127142..147127168,+!p1@ZIC1!1.00!8.89!ZIC1;;chr10:48359344..48359376,+!p2@ZNF488!0.98!8.60!ZNF488;;chr14:33403648..33403710,+!p3@NPAS3!0.98!8.60!NPAS3;;chr7:64023441..64023462,-!p1@ZNF680!0.97!68.09!ZNF680;;chr9:14314946..14314983,-!p8@NFIB!0.97!8.31!NFIB;;chrX:70315688..70315709,+!p1@FOXO4!0.96!19.49!FOXO4;;chr18:47814186..47814232,-!p2@CXXC1!0.96!17.20!CXXC1;;chr10:111987079..111987115,+!p3@MXI1!0.96!11.32!MXI1;;chr11:31832658..31832681,-!p1@PAX6!0.96!8.17!PAX6;;chr4:26344754..26344772,+!p10@RBPJ!0.96!8.17!RBPJ;;chr9:1050331..1050363,+!p1@DMRT2!0.96!8.17!DMRT2;;chr3:114819124..114819200,-!p3@ZBTB20!0.95!18.92!ZBTB20;;chr16:86544113..86544145,+!p1@FOXF1!0.95!10.03!FOXF1;;chr6:41701898..41701939,-!p5@TFEB!0.95!7.88!TFEB;;chr11:8102846..8102892,+!p1@TUB!0.94!11.04!TUB;;chr1:61924375..61924380,+!p6@NFIA!0.94!11.04!NFIA;;chr1:170632285..170632309,+!p1@PRRX1!0.94!8.74!PRRX1;;chr17:53342311..53342400,+!p1@HLF!0.93!8.60!HLF;;chr10:64134045..64134083,+!p3@ZNF365!0.93!7.60!ZNF365;;chr12:54778471..54778528,-!p1@ZNF385A!0.93!7.60!ZNF385A;;chr17:70117153..70117174,+!p1@SOX9!0.92!79.27!SOX9;;chr3:114866084..114866118,-!p2@ZBTB20!0.92!27.52!ZBTB20;;chr15:57210961..57211012,+!p3@TCF12!0.92!24.08!TCF12;;chr5:124084493..124084524,-!p2@ZNF608!0.92!16.91!ZNF608;;chr8:80679993..80680011,-!p1@HEY1!0.92!10.75!HEY1;;chr16:79633894..79633954,-!p3@MAF!0.91!14.05!MAF;;chr12:125003087..125003141,-!p4@NCOR2!0.91!9.32!NCOR2;;chr5:71803177..71803255,-!p1@ZNF366!0.91!7.17!ZNF366;;chr7:50343634..50343717,+!p2@IKZF1!0.91!7.17!IKZF1;;chr5:92918919..92918942,+!p1@NR2F1!0.90!32.11!NR2F1;;chr15:57511609..57511651,+!p2@TCF12!0.90!11.90!TCF12;;chr20:2673383..2673441,+!p1@EBF4!0.90!11.18!EBF4;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.90!6.88!ZNF676;;chr5:76383017..76383068,-!p1@ZBED3!0.89!25.80!ZBED3;;chr9:73029219..73029289,-!p2@KLF9!0.89!21.50!KLF9;;chr2:74229812..74229867,+!p1@TET3!0.89!17.49!TET3;;chr15:41913690..41913753,+!p2@MGA!0.89!17.06!MGA;;chr7:86781858..86781879,+!p3@DMTF1!0.89!11.18!DMTF1;;chr7:128577972..128578047,+!p1@IRF5!0.89!10.89!IRF5;;chr16:4323246..4323299,-!p5@TFAP4!0.89!6.74!TFAP4;;chr19:37096139..37096170,-!p2@ZNF529!0.88!19.21!ZNF529;;chr17:7492684..7492778,-!p2@SOX15!0.88!14.48!SOX15;;chr19:57183114..57183145,-!p1@ZNF835!0.88!7.45!ZNF835;;chr11:34654104..34654118,+!p5@EHF!0.88!6.59!EHF;;chr19:13134457..13134462,+!p5@NFIX!0.87!11.90!NFIX;;chr5:178368186..178368238,+!p1@ZNF454!0.87!11.75!ZNF454;;chrX:107018969..107019024,-!p6@TSC22D3!0.87!9.03!TSC22D3;;chr8:30890810..30890880,-!p1@PURG!0.87!6.45!PURG;;chr7:28448965..28448994,+!p2@CREB5!0.86!23.08!CREB5;;chr3:52001396..52001425,-!p4@PCBP4!0.86!11.47!PCBP4;;chr20:62680984..62680999,-!p1@SOX18!0.86!8.46!SOX18;;chr9:77112244..77112262,+!p1@RORB!0.86!7.02!RORB;;chr10:111985777..111985788,+!p4@MXI1!0.86!6.16!MXI1;;chr5:172483347..172483407,+!p1@C5orf41!0.85!48.88!CREBRF;;chr3:52001426..52001447,-!p3@PCBP4!0.85!17.92!PCBP4;;chr5:2751762..2751784,-!p1@IRX2!0.85!6.02!IRX2;;chr5:88178983..88179012,-!p1@MEF2C!0.84!49.17!MEF2C;;chr19:11959532..11959593,+!p1@ZNF439!0.84!23.94!ZNF439;;chr20:51588873..51588953,+!p1@TSHZ2!0.84!8.03!TSHZ2;;chr5:124082322..124082364,-!p1@ZNF608!0.83!15.62!ZNF608;;chr19:57019215..57019250,+!p1@ZNF471!0.83!9.03!ZNF471;;chr1:47697539..47697573,-!p3@TAL1!0.83!5.73!TAL1;;chr6:15401104..15401166,+!p5@JARID2!0.83!5.73!JARID2;;chr8:10588010..10588030,-!p1@SOX7!0.83!5.73!SOX7;;chr2:105470599..105470610,+!p@chr2:105470599..105470610,+!0.83!5.73!POU3F3;;chr12:106976656..106976672,+!p4@RFX4!0.83!5.73!RFX4;;chr19:58446721..58446779,-!p1@ZNF418!0.82!16.34!ZNF418;;chr6:91006518..91006570,-!p1@BACH2!0.82!13.47!BACH2;;chr16:51185439..51185450,-!p8@SALL1!0.82!5.59!SALL1;;chr2:145277640..145277771,-!p1@ZEB2!0.81!78.26!ZEB2;;chrX:101186981..101187030,-!p1@ZMAT1!0.81!18.78!ZMAT1;;chr19:38085633..38085706,-!p1@ZNF571!0.81!15.19!ZNF571;;chrX:107019163..107019179,-!p7@TSC22D3!0.81!6.45!TSC22D3;;chr7:86781916..86781963,+!p2@DMTF1!0.80!24.94!DMTF1;;chr18:22932080..22932170,-!p1@ZNF521!0.80!24.22!ZNF521;;chr8:77593474..77593612,+!p1@ZFHX4!0.80!24.08!ZFHX4;;chr7:64023410..64023428,-!p2@ZNF680!0.80!8.60!ZNF680;;chr7:6655225..6655279,+!p1@ENST00000457543!0.80!8.31!ZNF853;;chr18:53068911..53068935,-!p4@TCF4!0.80!6.02!TCF4;;chr12:24102576..24102623,-!p2@SOX5!0.80!5.30!SOX5;;chr10:38265517..38265591,-!p1@ZNF25!0.79!21.64!ZNF25;;chr19:9879350..9879419,-!p2@ZNF846!0.79!11.75!ZNF846;;chr19:13213662..13213686,-!p1@LYL1!0.79!7.88!LYL1;;chr17:41277479..41277510,-!p5@BRCA1!0.79!7.45!BRCA1;;chr18:56530756..56530774,+!p6@ZNF532!0.79!7.02!ZNF532;;chr12:24715376..24715432,-!p1@SOX5!0.79!6.74!SOX5;;chr1:61548118..61548129,+!p9@NFIA!0.79!5.88!NFIA;;chr12:26276197..26276214,-!p8@BHLHE41!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0.39!76.97!ZKSCAN1;;chrX:153363125..153363182,-!p1@MECP2!0.39!58.48!MECP2;;chr19:12721725..12721758,+!p1@ZNF791!0.39!38.27!ZNF791;;chr3:126194707..126194798,-!p1@ZXDC!0.39!35.98!ZXDC;;chr22:24093267..24093327,-!p1@ZNF70!0.39!14.62!ZNF70;;chr19:57831829..57831890,+!p1@ZNF543!0.39!13.19!ZNF543;;chr16:3450963..3451019,-!p1@ZNF434!0.39!13.04!ZNF434;;chr15:43663214..43663261,-!p@chr15:43663214..43663261,-!0.39!12.18!ZSCAN29;;chr3:44519131..44519186,-!p1@ZNF445!0.39!11.75!ZNF445;;chr20:32319784..32319813,+!p1@ZNF341!0.39!10.18!ZNF341;;chr9:99616768..99616819,-!p1@ZNF782!0.39!9.75!ZNF782;;chr19:36909528..36909581,-!p1@ZFP82!0.39!9.46!ZFP82;;chr17:56065729..56065781,-!p2@VEZF1!0.39!9.03!VEZF1;;chr19:12595586..12595637,-!p2@ZNF709!0.39!8.46!ZNF709;;chr19:44617538..44617598,+!p1@ZNF225!0.39!8.17!ZNF225;;chr16:89787402..89787430,+!p2@ZNF276!0.39!6.45!ZNF276;;chr17:59477233..59477263,+!p1@TBX2!0.39!6.16!TBX2;;chr5:139493727..139493766,+!p4@PURA!0.39!5.88!PURA;;chr5:178450797..178450814,+!p1@ZNF879!0.39!5.16!ZNF879;;chr9:3525727..3525828,-!p2@RFX3!0.39!5.02!RFX3;;chr2:113033141..113033162,+!p2@ZC3H6!0.39!4.01!ZC3H6;;chr16:30596963..30596999,-!p3@ZNF785!0.39!3.73!ZNF785;;chr5:43065197..43065244,+!p5@ZNF131!0.39!3.58!ZNF131;;chr20:62462566..62462631,-!p1@ZBTB46!0.39!3.44!ZBTB46;;chr7:148823387..148823440,-!p1@ZNF425!0.39!3.30!ZNF425;;chr19:37406934..37406949,-!p1@ZNF829!0.39!3.15!ZNF829;;chr19:4066890..4066903,-!p6@ZBTB7A!0.39!2.87!ZBTB7A;;chr8:116680215..116680245,-!p6@TRPS1!0.39!2.72!TRPS1;;chr9:32550965..32551031,-!p4@TOPORS!0.39!2.72!TOPORS;;chrX:76937934..76937974,-!p3@ATRX!0.39!2.72!ATRX;;chr13:46549911..46549956,-!p3@ZC3H13!0.39!2.44!ZC3H13;;chr6:1389789..1389821,+!p1@FOXF2!0.39!2.29!FOXF2;;chr14:24025106..24025172,-!p2@ZFHX2!0.39!2.15!ZFHX2;;chr19:37407411..37407451,+!p3@ZNF568!0.39!2.15!ZNF568;;chrX:70585978..70586012,+!p3@TAF1!0.39!2.01!TAF1;;chrX:136648643..136648711,+!p2@ZIC3!0.39!1.43!ZIC3;;chr5:142780189..142780223,-!p6@NR3C1!0.39!1.43!NR3C1;;chr6:108487289..108487302,+!p1@NR2E1!0.39!1.43!NR2E1;;chr6:126111875..126111886,+!p10@NCOA7!0.39!1.43!NCOA7;;chr8:123875520..123875536,+!p7@ZHX2!0.39!1.43!ZHX2;;chr2:66662697..66662711,+!p8@MEIS1!0.39!1.43!MEIS1;;chr2:85981107..85981120,+!p3@ATOH8!0.39!1.43!ATOH8;;chr3:114477934..114477961,-!p14@ZBTB20!0.39!1.43!ZBTB20;;chr4:57522674..57522699,-!p5@HOPX!0.39!1.43!HOPX;;chr19:44860847..44860861,-!p4@ZFP112,p4@ZNF285!0.39!1.43!ZFP112;;chr1:217262969..217262995,-!p7@ESRRG!0.39!1.43!ESRRG;;chr1:47695003..47695042,-!p2@TAL1!0.39!1.43!TAL1;;chr15:80696305..80696320,+!p10@ARNT2!0.39!1.43!ARNT2;;chr15:80696410..80696477,+!p6@ARNT2!0.39!1.43!ARNT2;;chr17:6926362..6926377,+!p1@BCL6B!0.39!1.43!BCL6B;;chr18:42260840..42260860,+!p2@SETBP1!0.39!1.43!SETBP1;;chr19:22605136..22605154,-!p1@ZNF98!0.39!1.43!ZNF98;;chr19:30863189..30863200,+!p3@ZNF536!0.39!1.43!ZNF536;;chr10:111967317..111967328,+!p5@MXI1!0.39!1.43!MXI1;;chr10:28032421..28032494,-!p2@MKX!0.39!1.43!MKX;;chr10:45495946..45495976,+!p2@ZNF22!0.39!1.43!ZNF22;;chr13:37494306..37494324,-!p4@SMAD9!0.39!1.43!SMAD9;;chr13:41635759..41635774,-!p21@ELF1!0.39!1.43!ELF1;;chr14:21994525..21994547,-!p4@SALL2!0.39!1.43!SALL2;;chr14:33403930..33403943,+!p7@NPAS3!0.39!1.43!NPAS3;;chr14:33408135..33408145,+!p10@NPAS3!0.39!1.43!NPAS3;;chr1:226595741..226595818,-!p1@PARP1!0.38!113.52!PARP1;;chr1:153895377..153895465,-!p1@GATAD2B!0.38!61.78!GATAD2B;;chr7:106809432..106809455,+!p1@HBP1!0.38!42.14!HBP1;;chr19:24216213..24216314,+!p1@ZNF254!0.38!37.55!ZNF254;;chr10:38299546..38299686,+!p1@ZNF33A!0.38!31.53!ZNF33A;;chr20:33413416..33413466,-!p1@NCOA6!0.38!25.66!NCOA6;;chr19:47617013..47617069,-!p2@ZC3H4!0.38!12.47!ZC3H4;;chr4:146859927..146860055,-!p1@ZNF827!0.38!12.47!ZNF827;;chr3:129158854..129158883,-!p3@MBD4!0.38!10.18!MBD4;;chr19:53073532..53073551,+!p1@ZNF701!0.38!9.17!ZNF701;;chrX:83757450..83757485,-!p1@HDX!0.38!8.74!HDX;;chr5:88179017..88179046,-!p2@MEF2C!0.38!8.17!MEF2C;;chr9:129622904..129622956,+!p1@ZBTB34!0.38!7.02!ZBTB34;;chr4:87928328..87928351,+!p6@AFF1!0.38!5.02!AFF1;;chr15:60884747..60884774,-!p3@RORA!0.38!4.59!RORA;;chr19:35225078..35225120,+!p2@ZNF181!0.38!4.30!ZNF181;;chr12:133707172..133707202,+!p2@ZNF10!0.38!4.30!ZNF10;;chr10:43932296..43932360,+!p1@ZNF487P!0.38!3.87!ZNF487P;;chr19:21950332..21950356,-!p2@ZNF100!0.38!3.87!ZNF100;;chr10:98592674..98592724,+!p2@LCOR!0.38!3.58!LCOR;;chr14:64970427..64970457,+!p3@ZBTB1!0.38!3.58!ZBTB1;;chr18:32924431..32924440,-!p2@ZNF24!0.38!3.01!ZNF24;;chr19:57791876..57791892,+!p5@ZNF460!0.38!2.72!ZNF460;;chr1:151043070..151043110,+!p3@GABPB2!0.38!2.72!GABPB2;;chr4:106156933..106156947,+!p3@TET2!0.38!2.15!TET2;;chr5:158526459..158526481,-!p2@EBF1!0.38!2.15!EBF1;;chr19:36980474..36980485,-!p4@ZNF566!0.38!1.86!ZNF566;;chr1:47903709..47903764,+!p1@BC169308!0.38!1.72!FOXD2;;chr17:56065540..56065627,-!p1@VEZF1!0.37!65.08!VEZF1;;chr1:90460661..90460745,+!p1@ZNF326!0.37!59.77!ZNF326;;chr5:138629628..138629688,+!p2@MATR3!0.37!50.03!MATR3;;chr1:200379129..200379174,-!p1@ZNF281!0.37!25.08!ZNF281;;chr8:71316021..71316068,-!p1@NCOA2!0.37!19.21!NCOA2;;chr19:40562072..40562143,-!p1@ZNF780B!0.37!19.06!ZNF780B;;chr7:148959269..148959326,+!p1@ZNF783!0.37!16.91!ZNF783;;chr13:37393351..37393423,+!p1@RFXAP!0.37!15.19!RFXAP;;chr19:52643169..52643199,-!p1@ZNF616!0.37!12.04!ZNF616;;chr3:40518599..40518664,+!p1@ZNF619!0.37!11.75!ZNF619;;chr17:47439568..47439641,-!p2@ZNF652!0.37!11.47!ZNF652;;chr19:57922521..57922550,+!p1@ZNF17!0.37!7.88!ZNF17;;chr19:58694742..58694800,+!p2@ZNF274!0.37!7.88!ZNF274;;chr19:44576296..44576343,+!p2@ZNF284!0.37!7.74!ZNF284;;chr20:47894936..47895010,-!p2@ZNFX1!0.37!6.16!ZNFX1;;chr3:187463220..187463232,-!p3@BCL6!0.37!5.73!BCL6;;chr13:74708029..74708077,-!p2@KLF12!0.37!5.45!KLF12;;chr16:4323015..4323067,-!p2@TFAP4!0.37!5.02!TFAP4;;chr9:2015306..2015323,+!p3@SMARCA2!0.37!4.87!SMARCA2;;chr5:138647473..138647476,+!p6@MATR3!0.37!4.73!MATR3;;chr9:14083467..14083483,-!p4@NFIB!0.37!4.59!NFIB;;chr16:3313791..3313834,+!p2@ZNF263!0.37!4.01!ZNF263;;chr16:54320675..54320715,-!p1@IRX3!0.37!3.87!IRX3;;chr11:47270436..47270464,+!p2@NR1H3!0.37!3.73!NR1H3;;chr7:44924939..44924993,-!p2@PURB!0.37!3.44!PURB;;chr10:43932553..43932571,+!p2@ZNF487P!0.37!2.87!ZNF487P;;chr19:35417844..35417877,+!p2@ZNF30!0.37!2.44!ZNF30;;chr1:164528297..164528309,+!p9@PBX1!0.37!2.01!PBX1;;chr19:44764031..44764072,+!p1@ZNF233!0.37!1.86!ZNF233;;chr6:28973366..28973394,-!p2@ZNF311!0.37!1.86!ZNF311;;chr9:2017365..2017380,+!p9@SMARCA2!0.37!1.86!SMARCA2;;chr1:164528687..164528711,+!p6@PBX1!0.37!1.72!PBX1;;chr1:170632959..170632987,+!p4@PRRX1!0.37!1.58!PRRX1;;chr8:48650715..48650735,-!p1@CEBPD!0.36!265.18!CEBPD;;chrX:77041685..77041716,-!p1@ATRX!0.36!59.06!ATRX;;chr3:23986762..23986821,+!p1@NR1D2!0.36!31.68!NR1D2;;chr10:98592009..98592061,+!p1@C10orf12,p1@LCOR!0.36!29.81!LCOR;;chr19:53193731..53193767,-!p1@ZNF83!0.36!18.35!ZNF83;;chr20:25677465..25677497,-!p1@ZNF337!0.36!12.18!ZNF337;;chr1:14026671..14026705,+!p2@PRDM2!0.36!12.04!PRDM2;;chr19:58258167..58258201,+!p1@ZNF776!0.36!11.75!ZNF776;;chr17:16472486..16472533,-!p1@ZNF287!0.36!9.60!ZNF287;;chr12:72058130..72058189,+!p2@THAP2!0.36!8.17!THAP2;;chr15:71184724..71184778,-!p1@THAP10!0.36!7.17!THAP10;;chr19:56915668..56915732,+!p1@ZNF583!0.36!7.02!ZNF583;;chr16:29817433..29817468,+!p8@MAZ!0.36!5.73!MAZ;;chr8:123794102..123794160,+!p3@ZHX2!0.36!5.02!ZHX2;;chr20:25677443..25677464,-!p2@ZNF337!0.36!4.16!ZNF337;;chr19:56879472..56879529,+!p2@ZNF542!0.36!3.73!ZNF542;;chr7:1570388..1570418,+!p2@MAFK!0.36!3.73!MAFK;;chr17:7382834..7382855,-!p6@ZBTB4!0.36!2.72!ZBTB4;;chr17:7382891..7382905,-!p7@ZBTB4!0.36!2.72!ZBTB4;;chr19:37019569..37019593,-!p2@ZNF260!0.36!2.58!ZNF260;;chr9:4299959..4299974,-!p4@GLIS3!0.36!2.58!GLIS3;;chr19:37708814..37708838,+!p2@ZNF383!0.36!2.29!ZNF383;;chr19:53039233..53039247,+!p2@ZNF808!0.36!2.29!ZNF808;;chr10:98592776..98592796,+!p4@LCOR!0.36!2.15!LCOR;;chr8:116681275..116681290,-!p11@TRPS1!0.36!1.86!TRPS1;;chr6:151694975..151694979,-!p7@ZBTB2!0.36!1.72!ZBTB2;;chr3:14989138..14989151,+!p6@NR2C2!0.36!1.58!NR2C2;;chr2:85980919..85980942,+!p4@ATOH8!0.36!1.43!ATOH8;;chr2:100721881..100721904,-!p6@AFF3!0.36!1.29!AFF3;;chr2:145271342..145271377,-!p5@ZEB2!0.36!1.29!ZEB2;;chr3:114343870..114343887,-!p9@ZBTB20!0.36!1.29!ZBTB20;;chr3:141151009..141151033,+!p10@ZBTB38!0.36!1.29!ZBTB38;;chr4:149363662..149363688,-!p6@NR3C2!0.36!1.29!NR3C2;;chr4:38665935..38665944,+!p9@KLF3!0.36!1.29!KLF3;;chr10:64133862..64133884,+!p4@ZNF365!0.36!1.29!ZNF365;;chr11:113930355..113930366,+!p5@ZBTB16!0.36!1.29!ZBTB16;;chr12:104531768..104531782,-!p7@NFYB!0.36!1.29!NFYB;;chr12:24103844..24103880,-!p3@SOX5!0.36!1.29!SOX5;;chr12:51611583..51611612,-!p4@POU6F1!0.36!1.29!POU6F1;;chr14:33403860..33403874,+!p5@NPAS3!0.36!1.29!NPAS3;;chr19:46806868..46806883,+!p3@HIF3A!0.36!1.29!HIF3A;;chr1:214161428..214161437,+!p6@PROX1!0.36!1.29!PROX1;;chr1:2985760..2985774,+!p1@PRDM16!0.36!1.29!PRDM16;;chrX:136648279..136648295,+!p1@ZIC3!0.36!1.29!ZIC3;;chr9:14308004..14308041,-!p14@NFIB!0.36!1.29!NFIB;;chr5:124084466..124084484,-!p6@ZNF608!0.36!1.29!ZNF608;;chr5:139494422..139494433,+!p12@PURA!0.36!1.29!PURA;; 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Revision as of 19:18, 29 June 2012
Name: | substantia nigra, adult, donor10252 |
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Species: | Human (Homo sapiens) |
Library ID: | {{{library_id}}} |
Sample type: | {{{sample_category}}} |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Download raw sequence, BAM & CTSS | ||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
no result for this sample
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12318
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12318
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.164 |
10 | 10 | 0.101 |
100 | 100 | 0.725 |
101 | 101 | 0.385 |
102 | 102 | 0.953 |
103 | 103 | 0.0171 |
104 | 104 | 0.0981 |
105 | 105 | 0.0978 |
106 | 106 | 0.0104 |
107 | 107 | 0.149 |
108 | 108 | 0.893 |
109 | 109 | 0.00121 |
11 | 11 | 0.0139 |
110 | 110 | 0.0653 |
111 | 111 | 0.5 |
112 | 112 | 0.257 |
113 | 113 | 0.0688 |
114 | 114 | 0.276 |
115 | 115 | 0.892 |
116 | 116 | 0.411 |
117 | 117 | 0.0324 |
118 | 118 | 0.413 |
119 | 119 | 0.644 |
12 | 12 | 0.211 |
120 | 120 | 0.166 |
121 | 121 | 0.467 |
122 | 122 | 0.737 |
123 | 123 | 0.0219 |
124 | 124 | 0.526 |
125 | 125 | 0.849 |
126 | 126 | 0.126 |
127 | 127 | 0.3 |
128 | 128 | 0.127 |
129 | 129 | 0.427 |
13 | 13 | 0.0091 |
130 | 130 | 0.112 |
131 | 131 | 0.021 |
132 | 132 | 0.261 |
133 | 133 | 0.192 |
134 | 134 | 0.383 |
135 | 135 | 0.265 |
136 | 136 | 0.00209 |
137 | 137 | 0.84 |
138 | 138 | 0.961 |
139 | 139 | 0.442 |
14 | 14 | 0.928 |
140 | 140 | 0.797 |
141 | 141 | 0.447 |
142 | 142 | 0.406 |
143 | 143 | 0.0238 |
144 | 144 | 0.53 |
145 | 145 | 0.596 |
146 | 146 | 0.567 |
147 | 147 | 0.773 |
148 | 148 | 0.859 |
149 | 149 | 0.125 |
15 | 15 | 0.0656 |
150 | 150 | 0.0729 |
151 | 151 | 0.933 |
152 | 152 | 0.0746 |
153 | 153 | 0.905 |
154 | 154 | 0.182 |
155 | 155 | 0.921 |
156 | 156 | 0.403 |
157 | 157 | 0.31 |
158 | 158 | 0.0858 |
159 | 159 | 0.00307 |
16 | 16 | 0.0297 |
160 | 160 | 0.224 |
161 | 161 | 0.301 |
162 | 162 | 0.703 |
163 | 163 | 0.578 |
164 | 164 | 0.0323 |
165 | 165 | 0.197 |
166 | 166 | 0.739 |
167 | 167 | 0.485 |
168 | 168 | 0.89 |
169 | 169 | 0.0579 |
17 | 17 | 0.0701 |
18 | 18 | 0.0376 |
19 | 19 | 0.479 |
2 | 2 | 0.781 |
20 | 20 | 0.321 |
21 | 21 | 0.058 |
22 | 22 | 0.276 |
23 | 23 | 0.324 |
24 | 24 | 0.0435 |
25 | 25 | 0.587 |
26 | 26 | 0.0635 |
27 | 27 | 0.336 |
28 | 28 | 0.921 |
29 | 29 | 0.00251 |
3 | 3 | 0.143 |
30 | 30 | 0.499 |
31 | 31 | 0.975 |
32 | 32 | 0.00856 |
33 | 33 | 0.0759 |
34 | 34 | 0.692 |
35 | 35 | 0.539 |
36 | 36 | 0.424 |
37 | 37 | 0.054 |
38 | 38 | 0.682 |
39 | 39 | 0.314 |
4 | 4 | 0.863 |
40 | 40 | 0.166 |
41 | 41 | 0.296 |
42 | 42 | 0.416 |
43 | 43 | 0.175 |
44 | 44 | 0.0848 |
45 | 45 | 0.59 |
46 | 46 | 0.0302 |
47 | 47 | 0.134 |
48 | 48 | 0.133 |
49 | 49 | 0.695 |
5 | 5 | 0.788 |
50 | 50 | 0.687 |
51 | 51 | 0.308 |
52 | 52 | 0.626 |
53 | 53 | 0.168 |
54 | 54 | 0.752 |
55 | 55 | 0.892 |
56 | 56 | 0.729 |
57 | 57 | 0.619 |
58 | 58 | 0.431 |
59 | 59 | 0.0481 |
6 | 6 | 0.494 |
60 | 60 | 0.115 |
61 | 61 | 0.237 |
62 | 62 | 0.191 |
63 | 63 | 0.666 |
64 | 64 | 0.132 |
65 | 65 | 0.355 |
66 | 66 | 0.0634 |
67 | 67 | 0.498 |
68 | 68 | 0.337 |
69 | 69 | 0.471 |
7 | 7 | 0.142 |
70 | 70 | 0.19 |
71 | 71 | 0.0122 |
72 | 72 | 0.159 |
73 | 73 | 0.0422 |
74 | 74 | 0.623 |
75 | 75 | 0.0218 |
76 | 76 | 0.342 |
77 | 77 | 0.123 |
78 | 78 | 0.00393 |
79 | 79 | 0.54 |
8 | 8 | 0.0669 |
80 | 80 | 0.325 |
81 | 81 | 0.632 |
82 | 82 | 0.789 |
83 | 83 | 0.0853 |
84 | 84 | 0.471 |
85 | 85 | 0.848 |
86 | 86 | 0.197 |
87 | 87 | 2.19812e-4 |
88 | 88 | 0.562 |
89 | 89 | 0.0771 |
9 | 9 | 0.265 |
90 | 90 | 0.366 |
91 | 91 | 0.677 |
92 | 92 | 0.573 |
93 | 93 | 0.884 |
94 | 94 | 0.273 |
95 | 95 | 0.02 |
96 | 96 | 0.547 |
97 | 97 | 0.771 |
98 | 98 | 0.237 |
99 | 99 | 0.566 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12318
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010158 human substantia nigra - adult donor sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000922 (embryo)
0000955 (brain)
0002038 (substantia nigra)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0002346 (neurectoderm)
0000064 (organ part)
0000073 (regional part of nervous system)
0004121 (ectoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000025 (tube)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0002020 (gray matter)
0002791 (regional part of telencephalon)
0003528 (brain grey matter)
0000467 (anatomical system)
0002616 (regional part of brain)
0001062 (anatomical entity)
0000119 (cell layer)
0005291 (embryonic tissue)
0002308 (nucleus of brain)
0009663 (telencephalic nucleus)
0002420 (basal ganglion)
0002780 (regional part of forebrain)
0009661 (midbrain nucleus)
0006331 (brainstem nucleus)
0000125 (neural nucleus)
0002950 (regional part of midbrain)
0007245 (nuclear complex of neuraxis)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0010009 (aggregate regional part of brain)
0001017 (central nervous system)
0001016 (nervous system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000924 (ectoderm)
0001893 (telencephalon)
0001890 (forebrain)
0002298 (brainstem)
0001891 (midbrain)
0010011 (collection of basal ganglia)
0003075 (neural plate)
0003056 (pre-chordal neural plate)
0001049 (neural tube)
0006238 (future brain)
0000454 (cerebral subcortex)
0006601 (presumptive ectoderm)
0005068 (neural rod)
0006241 (future spinal cord)
0003080 (anterior neural tube)
0006240 (future forebrain)
0009616 (presumptive midbrain)
0007284 (presumptive neural plate)
0007135 (neural keel)
FF: FANTOM5
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Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
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