FF:11463-119B5: Difference between revisions

Revision as of 15:17, 15 May 2017

Name:	Anulus Pulposus Cell, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs12064
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	spinal cord
dev stage	NA
sex	unknown
age	NA
cell type	anulus fibrosus cell of intervertebral disc
cell line	NA
company	Sciencell
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	lot:5027
catalog number	SC4815
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005450

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12064		CAGE		DRX008111		DRR008983

Accession ID Hg19

Library id		BAM		CTSS
CNhs12064		DRZ000408		DRZ001793

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.073
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.367
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.221
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.221
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.151
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.291
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.124
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.778
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.122
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0366
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.221
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.271
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.0054
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.312
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.124
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.124
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.402
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.124
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.3
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.424
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.221
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.424
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.635
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12064

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0694
MA0003.1	MA0003.1	0.266
MA0004.1	MA0004.1	0.43
MA0006.1	MA0006.1	0.236
MA0007.1	MA0007.1	0.29
MA0009.1	MA0009.1	0.59
MA0014.1	MA0014.1	0.601
MA0017.1	MA0017.1	0.945
MA0018.2	MA0018.2	0.00175
MA0019.1	MA0019.1	0.459
MA0024.1	MA0024.1	6.396e-6
MA0025.1	MA0025.1	0.0295
MA0027.1	MA0027.1	0.611
MA0028.1	MA0028.1	0.00479
MA0029.1	MA0029.1	0.849
MA0030.1	MA0030.1	0.871
MA0031.1	MA0031.1	0.759
MA0035.2	MA0035.2	0.127
MA0038.1	MA0038.1	0.209
MA0039.2	MA0039.2	0.287
MA0040.1	MA0040.1	0.275
MA0041.1	MA0041.1	0.231
MA0042.1	MA0042.1	0.25
MA0043.1	MA0043.1	0.00773
MA0046.1	MA0046.1	0.477
MA0047.2	MA0047.2	0.34
MA0048.1	MA0048.1	0.77
MA0050.1	MA0050.1	8.49586e-7
MA0051.1	MA0051.1	0.00365
MA0052.1	MA0052.1	0.946
MA0055.1	MA0055.1	0.44
MA0057.1	MA0057.1	0.775
MA0058.1	MA0058.1	0.311
MA0059.1	MA0059.1	0.152
MA0060.1	MA0060.1	2.47137e-5
MA0061.1	MA0061.1	0.218
MA0062.2	MA0062.2	4.07897e-8
MA0065.2	MA0065.2	0.944
MA0066.1	MA0066.1	0.413
MA0067.1	MA0067.1	0.0402
MA0068.1	MA0068.1	0.167
MA0069.1	MA0069.1	0.746
MA0070.1	MA0070.1	0.848
MA0071.1	MA0071.1	0.923
MA0072.1	MA0072.1	0.526
MA0073.1	MA0073.1	0.926
MA0074.1	MA0074.1	0.304
MA0076.1	MA0076.1	0.00103
MA0077.1	MA0077.1	0.227
MA0078.1	MA0078.1	0.653
MA0079.2	MA0079.2	0.141
MA0080.2	MA0080.2	1.93823e-9
MA0081.1	MA0081.1	0.0043
MA0083.1	MA0083.1	4.02576e-4
MA0084.1	MA0084.1	0.511
MA0087.1	MA0087.1	0.436
MA0088.1	MA0088.1	0.662
MA0090.1	MA0090.1	0.0105
MA0091.1	MA0091.1	0.0121
MA0092.1	MA0092.1	0.712
MA0093.1	MA0093.1	0.321
MA0099.2	MA0099.2	0.726
MA0100.1	MA0100.1	0.301
MA0101.1	MA0101.1	0.00688
MA0102.2	MA0102.2	0.933
MA0103.1	MA0103.1	0.114
MA0104.2	MA0104.2	0.0948
MA0105.1	MA0105.1	0.673
MA0106.1	MA0106.1	0.433
MA0107.1	MA0107.1	0.00588
MA0108.2	MA0108.2	0.0671
MA0111.1	MA0111.1	0.601
MA0112.2	MA0112.2	0.0482
MA0113.1	MA0113.1	0.0625
MA0114.1	MA0114.1	0.802
MA0115.1	MA0115.1	0.271
MA0116.1	MA0116.1	0.876
MA0117.1	MA0117.1	0.178
MA0119.1	MA0119.1	0.505
MA0122.1	MA0122.1	0.909
MA0124.1	MA0124.1	0.491
MA0125.1	MA0125.1	0.464
MA0131.1	MA0131.1	0.44
MA0135.1	MA0135.1	0.585
MA0136.1	MA0136.1	9.22295e-13
MA0137.2	MA0137.2	0.317
MA0138.2	MA0138.2	0.189
MA0139.1	MA0139.1	0.866
MA0140.1	MA0140.1	0.0669
MA0141.1	MA0141.1	0.301
MA0142.1	MA0142.1	0.51
MA0143.1	MA0143.1	0.814
MA0144.1	MA0144.1	0.117
MA0145.1	MA0145.1	0.317
MA0146.1	MA0146.1	0.213
MA0147.1	MA0147.1	0.0636
MA0148.1	MA0148.1	0.13
MA0149.1	MA0149.1	0.0601
MA0150.1	MA0150.1	0.157
MA0152.1	MA0152.1	0.04
MA0153.1	MA0153.1	0.231
MA0154.1	MA0154.1	0.521
MA0155.1	MA0155.1	0.0912
MA0156.1	MA0156.1	1.15336e-10
MA0157.1	MA0157.1	0.775
MA0159.1	MA0159.1	0.502
MA0160.1	MA0160.1	0.363
MA0162.1	MA0162.1	0.167
MA0163.1	MA0163.1	0.239
MA0164.1	MA0164.1	0.882
MA0258.1	MA0258.1	0.901
MA0259.1	MA0259.1	0.204

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12064

Novel motif	Logo	P-value
1	1	0.457
10	10	0.515
100	100	0.424
101	101	0.3
102	102	0.299
103	103	0.333
104	104	0.695
105	105	0.826
106	106	0.378
107	107	0.0355
108	108	0.436
109	109	0.996
11	11	0.681
110	110	0.53
111	111	0.279
112	112	0.729
113	113	0.94
114	114	0.978
115	115	0.399
116	116	0.107
117	117	0.736
118	118	0.991
119	119	0.898
12	12	0.533
120	120	0.255
121	121	0.243
122	122	0.185
123	123	3.18657e-5
124	124	0.323
125	125	0.0181
126	126	0.697
127	127	0.322
128	128	0.0482
129	129	0.769
13	13	0.108
130	130	0.526
131	131	0.208
132	132	0.131
133	133	0.811
134	134	0.476
135	135	0.764
136	136	0.291
137	137	0.107
138	138	0.428
139	139	0.864
14	14	0.986
140	140	0.665
141	141	0.0947
142	142	0.457
143	143	0.769
144	144	0.434
145	145	0.82
146	146	0.808
147	147	0.221
148	148	0.914
149	149	0.0671
15	15	0.391
150	150	0.846
151	151	0.734
152	152	0.0853
153	153	0.773
154	154	0.206
155	155	0.0846
156	156	0.268
157	157	0.681
158	158	0.0599
159	159	0.478
16	16	0.0641
160	160	0.54
161	161	0.638
162	162	0.352
163	163	0.964
164	164	0.481
165	165	0.894
166	166	0.251
167	167	0.107
168	168	0.795
169	169	0.141
17	17	0.391
18	18	0.515
19	19	0.0366
2	2	0.0862
20	20	0.382
21	21	0.579
22	22	0.0687
23	23	0.201
24	24	0.488
25	25	0.447
26	26	0.786
27	27	0.103
28	28	0.133
29	29	0.451
3	3	0.793
30	30	0.0704
31	31	0.28
32	32	3.16343e-10
33	33	0.805
34	34	0.468
35	35	0.739
36	36	0.0251
37	37	0.162
38	38	0.674
39	39	0.475
4	4	0.132
40	40	0.0762
41	41	0.102
42	42	0.526
43	43	0.992
44	44	0.401
45	45	0.138
46	46	0.477
47	47	0.335
48	48	0.701
49	49	0.506
5	5	0.846
50	50	0.521
51	51	0.636
52	52	0.402
53	53	0.0541
54	54	0.569
55	55	0.438
56	56	0.863
57	57	0.469
58	58	0.326
59	59	0.029
6	6	0.303
60	60	0.592
61	61	0.298
62	62	0.715
63	63	0.868
64	64	0.812
65	65	0.312
66	66	0.241
67	67	0.72
68	68	0.126
69	69	0.264
7	7	0.512
70	70	1
71	71	0.477
72	72	0.961
73	73	0.0841
74	74	0.305
75	75	0.814
76	76	0.55
77	77	0.0758
78	78	0.231
79	79	0.0243
8	8	0.516
80	80	0.68
81	81	0.722
82	82	0.341
83	83	0.929
84	84	0.286
85	85	0.24
86	86	0.725
87	87	0.624
88	88	0.469
89	89	0.212
9	9	0.134
90	90	0.00619
91	91	0.999
92	92	0.263
93	93	0.588
94	94	0.858
95	95	0.843
96	96	0.878
97	97	0.507
98	98	0.647
99	99	3.54481e-4

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12064

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000192 human anulus pulposus cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002602 (annulus pulposus cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002384 (connective tissue)
0002418 (cartilage tissue)
0000479 (tissue)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004905 (articulation)
0011135 (intervertebral cartilage)
0000075 (subdivision of skeletal system)
0002216 (symphysis)
0004765 (skeletal element)
0011134 (nonsynovial joint)
0002209 (fibrous joint)
0002213 (cartilaginous joint)
0000982 (skeletal joint)
0004755 (skeletal tissue)
0006444 (annulus fibrosus)
0001995 (fibrocartilage)
0007844 (cartilage element)
0004715 (annulus fibrosus disci intervertebralis)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0004770 (articular system)
0011138 (post-cranial axial skeletal system)
0001130 (vertebral column)
0001066 (intervertebral disk)
0001468 (intervertebral joint)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000192 (human anulus pulposus cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr14:61116183..61116208,-!p1@SIX1!1.87!266.77!SIX1;;chr14:37126765..37126799,+!p2@PAX9!1.68!47.39!PAX9;;chr14:75746722..75746777,+!p2@FOS!1.53!41.76!FOS;;chr12:54378923..54378966,+!p1@HOXC10!1.52!31.81!HOXC10;;chr7:19157248..19157268,-!p1@TWIST1!1.51!85.17!TWIST1;;chr6:1610293..1610310,+!p1@FOXC1!1.50!50.37!FOXC1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.50!30.82!HOXC5;;chr14:37131058..37131139,+!p1@PAX9!1.47!28.50!PAX9;;chr7:27192185..27192209,-!p1@HOXA3!1.43!25.85!HOXA3;;chr20:50179368..50179392,-!p2@NFATC2!1.41!31.48!NFATC2;;chr17:46682321..46682362,-!p1@HOXB6!1.39!23.53!HOXB6;;chr20:21686317..21686350,+!p1@PAX1!1.38!23.20!PAX1;;chr19:13134772..13134822,+!p2@NFIX!1.33!29.49!NFIX;;chr12:54379029..54379057,+!p2@HOXC10!1.33!20.22!HOXC10;;chr14:75745523..75745537,+!p1@FOS!1.31!2224.01!FOS;;chr20:21686290..21686311,+!p2@PAX1!1.30!18.89!PAX1;;chr7:27205136..27205164,-!p1@HOXA9!1.30!18.89!HOXA9;;chr7:27196217..27196246,-!p2@HOXA7!1.28!17.90!HOXA7;;chr5:158526917..158526932,-!p1@EBF1!1.26!42.42!EBF1;;chr6:85474299..85474324,-!p1@TBX18!1.26!30.49!TBX18;;chr7:19157043..19157088,-!p2@TWIST1!1.23!40.10!TWIST1;;chr9:132427883..132427951,+!p2@PRRX2!1.22!15.58!PRRX2;;chr2:45236540..45236577,-!p1@SIX2!1.19!14.58!SIX2;;chr12:115122318..115122331,-!p2@TBX3!1.15!13.26!TBX3;;chr6:134210243..134210257,+!p1@TCF21!1.15!13.26!TCF21;;chr14:61116168..61116180,-!p2@SIX1!1.14!14.58!SIX1;;chr9:132427972..132428056,+!p1@PRRX2!1.13!16.24!PRRX2;;chr16:86544113..86544145,+!p1@FOXF1!1.11!14.91!FOXF1;;chr11:46299539..46299620,+!p2@CREB3L1!1.08!18.89!CREB3L1;;chr11:113930425..113930471,+!p1@ZBTB16!1.08!15.91!ZBTB16;;chr9:96717629..96717644,-!p1@BARX1!1.08!10.94!BARX1;;chr2:85981107..85981120,+!p3@ATOH8!1.08!10.94!ATOH8;;chr9:77112244..77112262,+!p1@RORB!1.07!11.93!RORB;;chr19:45971246..45971265,+!p1@FOSB!1.06!197.18!FOSB;;chr6:1389789..1389821,+!p1@FOXF2!1.06!14.58!FOXF2;;chr12:54402745..54402788,+!p1@HOXC8!1.03!9.61!HOXC8;;chr12:52445218..52445237,+!p1@NR4A1!1.01!118.64!NR4A1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.01!9.94!GLIS1;;chr3:147111231..147111281,+!p3@ZIC1!1.01!9.28!ZIC1;;chr1:59249688..59249703,-!p3@JUN!1.00!55.34!JUN;;chr3:147127142..147127168,+!p1@ZIC1!1.00!8.95!ZIC1;;chr8:49833948..49833973,-!p2@SNAI2!0.99!57.33!SNAI2;;chr21:47063625..47063658,+!p1@PCBP3!0.99!39.10!PCBP3;;chr12:54393880..54393962,+!p1@HOXC9!0.98!8.62!HOXC9;;chr1:170633348..170633399,+!p2@PRRX1!0.97!11.60!PRRX1;;chr3:147127177..147127194,+!p2@ZIC1!0.97!8.28!ZIC1;;chr8:48650715..48650735,-!p1@CEBPD!0.96!1057.49!CEBPD;;chr11:46299199..46299233,+!p1@CREB3L1!0.96!43.08!CREB3L1;;chr14:61191018..61191048,-!p1@SIX4!0.96!17.90!SIX4;;chr5:137804484..137804498,+!p2@EGR1!0.95!33.14!EGR1;;chr12:66218598..66218645,+!p2@HMGA2!0.94!36.45!HMGA2;;chr9:16870659..16870675,-!p2@BNC2!0.94!9.61!BNC2;;chr17:46675558..46675577,-!p2@HOXB6!0.92!7.29!HOXB6;;chr11:113930401..113930422,+!p3@ZBTB16!0.92!7.29!ZBTB16;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.92!7.29!HOXC5;;chr1:170633262..170633285,+!p3@PRRX1!0.91!8.28!PRRX1;;chr4:13546632..13546662,-!p1@NKX3-2!0.90!6.96!NKX3-2;;chr4:174451370..174451387,-!p1@HAND2!0.90!6.96!HAND2;;chr21:36260773..36260804,-!p7@RUNX1!0.89!9.28!RUNX1;;chr12:115121962..115121987,-!p1@TBX3!0.88!58.33!TBX3;;chr5:158527139..158527161,-!p5@EBF1!0.88!6.63!EBF1;;chr1:44513995..44514031,+!p1@KLF17!0.88!6.63!KLF17;;chr12:66218836..66218888,+!p1@HMGA2!0.87!63.96!HMGA2;;chr3:12329358..12329393,+!p3@PPARG!0.87!16.57!PPARG;;chr15:42749722..42749739,-!p2@ZFP106!0.87!11.93!ZFP106;;chr11:65687362..65687436,+!p3@DRAP1!0.86!29.83!DRAP1;;chr7:27183263..27183284,-!p2@HOXA5!0.86!6.30!HOXA5;;chr7:27205106..27205134,-!p2@HOXA9!0.86!6.30!HOXA9;;chr5:137801160..137801176,+!p1@EGR1!0.85!641.25!EGR1;;chr17:46675420..46675465,-!p3@HOXB6!0.84!6.96!HOXB6;;chr20:21687260..21687270,+!p3@PAX1!0.84!5.97!PAX1;;chr12:54380404..54380433,+!p3@HOXC10!0.84!5.97!HOXC10;;chr5:158526459..158526481,-!p2@EBF1!0.83!7.95!EBF1;;chr20:30193083..30193098,+!p1@ID1!0.82!488.48!ID1;;chr12:54402790..54402805,+!p2@HOXC8!0.82!5.63!HOXC8;;chr14:75746781..75746799,+!p6@FOS!0.82!5.63!FOS;;chr5:158527104..158527135,-!p4@EBF1!0.82!5.63!EBF1;;chr7:27213893..27213954,-!p1@HOXA10!0.82!5.63!HOXA10;;chr8:77593750..77593757,+!p3@ZFHX4!0.82!5.63!ZFHX4;;chr2:45236579..45236596,-!p2@SIX2!0.82!5.63!SIX2;;chr9:73028814..73028895,-!p1@KLF9!0.81!57.99!KLF9;;chr3:187463179..187463201,-!p2@BCL6!0.81!24.19!BCL6;;chr7:28448965..28448994,+!p2@CREB5!0.81!20.55!CREB5;;chr14:24837368..24837401,+!p1@NFATC4!0.81!13.59!NFATC4;;chr9:16870710..16870763,-!p1@BNC2!0.81!9.94!BNC2;;chr2:239756739..239756755,+!p2@TWIST2!0.81!9.61!TWIST2;;chr1:59249707..59249727,-!p1@JUN!0.80!242.25!JUN;;chr14:62162258..62162269,+!p2@HIF1A!0.80!55.01!HIF1A;;chr11:65687158..65687216,+!p4@DRAP1!0.80!33.14!DRAP1;;chr17:46688334..46688385,-!p1@HOXB7!0.80!7.95!HOXB7;;chr16:86600870..86600921,+!p2@FOXC2!0.80!5.30!FOXC2;;chr3:25470156..25470227,+!p2@RARB!0.80!5.30!RARB;;chr7:15726296..15726315,-!p1@MEOX2!0.80!5.30!MEOX2;;chr19:58987786..58987805,+!p3@ZNF446!0.79!7.62!ZNF446;;chr2:239756671..239756732,+!p1@TWIST2!0.78!17.56!TWIST2;;chr16:86600426..86600441,+!p1@FOXC2!0.78!13.26!FOXC2;;chr2:85980951..85981004,+!p1@ATOH8!0.78!8.62!ATOH8;;chr2:85981222..85981259,+!p2@ATOH8!0.78!8.62!ATOH8;;chr22:19748231..19748317,+!p1@TBX1!0.78!4.97!TBX1;;chr2:85981073..85981091,+!p5@ATOH8!0.78!4.97!ATOH8;;chr4:13546583..13546593,-!p3@NKX3-2!0.78!4.97!NKX3-2;;chr7:15725757..15725828,-!p5@MEOX2!0.78!4.97!MEOX2;;chr7:27183291..27183324,-!p1@HOXA5!0.78!4.97!HOXA5;;chr7:27196196..27196210,-!p5@HOXA7!0.78!4.97!HOXA7;;chr10:131762504..131762555,-!p1@EBF3!0.78!4.97!EBF3;;chr14:37126814..37126834,+!p4@PAX9!0.78!4.97!PAX9;;chr19:42788636..42788660,+!p1@CIC!0.77!8.62!CIC;;chr8:99956662..99956684,+!p1@OSR2!0.76!7.62!OSR2;;chr1:170632285..170632309,+!p1@PRRX1!0.75!5.30!PRRX1;;chr2:214014959..214015006,-!p4@IKZF2!0.75!4.64!IKZF2;;chr2:96012397..96012417,+!p3@KCNIP3!0.75!4.64!KCNIP3;;chr3:42695180..42695201,+!p2@ZBTB47!0.75!4.64!ZBTB47;;chr7:15726243..15726293,-!p2@MEOX2!0.75!4.64!MEOX2;;chr6:34204921..34204939,+!p3@HMGA1!0.74!150.12!HMGA1;;chr14:21994337..21994442,-!p1@SALL2!0.74!13.59!SALL2;;chr3:12330560..12330579,+!p1@PPARG!0.74!5.30!PPARG;;chr1:170632959..170632987,+!p4@PRRX1!0.74!4.97!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!0.72!107.04!AEBP1;;chr12:57504975..57505019,-!p2@STAT6!0.72!19.22!STAT6;;chr3:12329397..12329433,+!p2@PPARG!0.72!10.60!PPARG;;chr17:46690839..46690884,-!p1@HOXB8!0.72!4.31!HOXB8;;chr19:46801639..46801699,+!p1@HIF3A!0.72!4.31!HIF3A;;chr7:27183191..27183214,-!p4@HOXA5!0.72!4.31!HOXA5;;chrY:21906594..21906622,-!p1@KDM5D!0.72!4.31!KDM5D;;chr2:157189180..157189290,-!p1@NR4A2!0.71!23.86!NR4A2;;chr9:73029219..73029289,-!p2@KLF9!0.71!13.92!KLF9;;chr6:144329384..144329405,-!p1@PLAGL1!0.70!52.36!PLAGL1;;chr6:45296048..45296082,+!p1@RUNX2!0.70!4.64!RUNX2;;chr7:27183114..27183138,-!p3@HOXA5!0.70!3.98!HOXA5;;chr14:61190754..61190776,-!p6@SIX4!0.70!3.98!SIX4;;chr13:45010939..45011033,-!p1@TSC22D1!0.69!295.94!TSC22D1;;chr19:56154958..56155027,+!p1@ZNF581!0.68!145.81!ZNF581;;chr12:66218255..66218304,+!p3@HMGA2!0.68!11.27!HMGA2;;chr5:92920256..92920282,+!p7@NR2F1!0.67!4.64!NR2F1;;chr11:125034640..125034655,+!p1@PKNOX2!0.67!3.65!PKNOX2;;chr11:46299443..46299459,+!p4@CREB3L1!0.67!3.65!CREB3L1;;chr12:115121802..115121814,-!p5@TBX3!0.67!3.65!TBX3;;chr12:54422268..54422278,+!p8@HOXC6!0.67!3.65!HOXC6;;chr2:95963052..95963106,+!p1@KCNIP3!0.67!3.65!KCNIP3;;chr20:21687193..21687206,+!p4@PAX1!0.67!3.65!PAX1;;chr21:38071430..38071456,+!p1@SIM2!0.67!3.65!SIM2;;chrX:85403445..85403479,+!p2@DACH2!0.67!3.65!DACH2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.66!41.42!GLIS2;;chr10:63853436..63853442,+!p4@ARID5B!0.66!22.20!ARID5B;;chr5:321810..321877,+!p1@AHRR!0.66!12.92!AHRR;;chr2:19558373..19558392,-!p1@OSR1!0.66!10.94!OSR1;;chr2:214015111..214015179,-!p1@IKZF2!0.66!6.96!IKZF2;;chrX:66763856..66763896,+!p1@AR!0.65!5.30!AR;;chr8:77593474..77593612,+!p1@ZFHX4!0.64!16.57!ZFHX4;;chr19:12902289..12902307,+!p1@JUNB!0.63!888.14!JUNB;;chr19:13134457..13134462,+!p5@NFIX!0.63!6.30!NFIX;;chr15:57511609..57511651,+!p2@TCF12!0.63!5.97!TCF12;;chr16:31076332..31076388,-!p3@ZNF668!0.63!3.31!ZNF668;;chr3:147111198..147111225,+!p4@ZIC1!0.63!3.31!ZIC1;;chr3:147139053..147139112,+!p5@ZIC1!0.63!3.31!ZIC1;;chr12:54402729..54402743,+!p3@HOXC8!0.63!3.31!HOXC8;;chr8:49833978..49833996,-!p1@SNAI2!0.62!77.55!SNAI2;;chr13:73633131..73633149,+!p1@KLF5!0.62!40.10!KLF5;;chr14:62162285..62162296,+!p3@HIF1A!0.62!19.55!HIF1A;;chr14:61191049..61191080,-!p2@SIX4!0.62!5.97!SIX4;;chr11:113930291..113930339,+!p2@ZBTB16!0.62!5.63!ZBTB16;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.61!17.23!GLIS2;;chr5:72744445..72744466,-!p2@FOXD1!0.61!5.63!FOXD1;;chr5:137804130..137804156,+!p5@EGR1!0.61!3.31!EGR1;;chr9:94186101..94186122,-!p1@NFIL3!0.60!50.37!NFIL3;;chr6:19837592..19837621,+!p1@ID4!0.60!21.87!ID4;;chr17:59477233..59477263,+!p1@TBX2!0.60!10.60!TBX2;;chr9:102584159..102584174,+!p2@NR4A3!0.60!5.97!NR4A3;;chr6:1612248..1612281,+!p2@FOXC1!0.60!3.31!FOXC1;;chr6:1389989..1390019,+!p2@FOXF2!0.60!2.98!FOXF2;;chr7:27142290..27142310,-!p1@HOXA2!0.60!2.98!HOXA2;;chr8:30890810..30890880,-!p1@PURG!0.60!2.98!PURG;;chr15:67391010..67391046,+!p13@SMAD3!0.60!2.98!SMAD3;;chr10:28034739..28034756,-!p1@MKX!0.60!2.98!MKX;;chr11:125034605..125034636,+!p2@PKNOX2!0.60!2.98!PKNOX2;;chr12:115121587..115121597,-!p10@TBX3!0.60!2.98!TBX3;;chr12:115121770..115121781,-!p4@TBX3!0.60!2.98!TBX3;;chr12:115122303..115122314,-!p6@TBX3!0.60!2.98!TBX3;;chr12:54394309..54394336,+!p2@HOXC9!0.60!2.98!HOXC9;;chr12:54410948..54410992,+!p3@HOXC5!0.60!2.98!HOXC5;;chr12:54422217..54422239,+!p3@HOXC6!0.60!2.98!HOXC6;;chrY:2803415..2803468,+!p1@ZFY!0.60!2.98!ZFY;;chr5:72744594..72744609,-!p1@FOXD1!0.59!15.91!FOXD1;;chr5:92918919..92918942,+!p1@NR2F1!0.59!15.24!NR2F1;;chr19:56111680..56111716,+!p1@ZNF524!0.59!12.92!ZNF524;;chr5:76383070..76383117,-!p3@ZBED3!0.59!6.63!ZBED3;;chr12:66218183..66218209,+!p4@HM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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002602;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000075;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000982;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007844;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0011135
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11463-119B5: Difference between revisions

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Revision as of 15:17, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0