FF:11397-118D2: Difference between revisions

Revision as of 17:37, 29 June 2012

Name:	Skeletal Muscle Satellite Cells, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skeletal muscle
dev stage	fetus
sex	unknown
age	fetal
cell type	satellite cell, skeletal muscle
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1142
catalog number	SC3515
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-7.601071e-4
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.471
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	4.379832e-4
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0.0684
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.0278
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0548
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0.0684
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0989
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0961
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.135
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0355
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.06
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.411
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0161
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.137
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.226
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0123
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.49
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0355
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.505
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.2
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0355
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.226
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.214
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.439
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.471
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.141
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0.0355
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.256
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.571
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12008

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.014
MA0003.1	MA0003.1	0.503
MA0004.1	MA0004.1	0.851
MA0006.1	MA0006.1	0.834
MA0007.1	MA0007.1	0.935
MA0009.1	MA0009.1	0.349
MA0014.1	MA0014.1	0.768
MA0017.1	MA0017.1	0.129
MA0018.2	MA0018.2	0.263
MA0019.1	MA0019.1	0.669
MA0024.1	MA0024.1	3.04102e-9
MA0025.1	MA0025.1	0.0318
MA0027.1	MA0027.1	0.748
MA0028.1	MA0028.1	0.153
MA0029.1	MA0029.1	0.409
MA0030.1	MA0030.1	0.00164
MA0031.1	MA0031.1	0.00168
MA0035.2	MA0035.2	0.00356
MA0038.1	MA0038.1	0.0187
MA0039.2	MA0039.2	0.529
MA0040.1	MA0040.1	0.105
MA0041.1	MA0041.1	0.301
MA0042.1	MA0042.1	0.309
MA0043.1	MA0043.1	0.0367
MA0046.1	MA0046.1	0.0821
MA0047.2	MA0047.2	0.0108
MA0048.1	MA0048.1	0.0893
MA0050.1	MA0050.1	1.04555e-5
MA0051.1	MA0051.1	4.94445e-5
MA0052.1	MA0052.1	0.00525
MA0055.1	MA0055.1	0.23
MA0057.1	MA0057.1	0.455
MA0058.1	MA0058.1	0.774
MA0059.1	MA0059.1	0.718
MA0060.1	MA0060.1	3.07841e-6
MA0061.1	MA0061.1	0.00121
MA0062.2	MA0062.2	0.255
MA0065.2	MA0065.2	0.00644
MA0066.1	MA0066.1	0.82
MA0067.1	MA0067.1	0.0276
MA0068.1	MA0068.1	0.0803
MA0069.1	MA0069.1	0.728
MA0070.1	MA0070.1	0.0863
MA0071.1	MA0071.1	0.745
MA0072.1	MA0072.1	0.174
MA0073.1	MA0073.1	0.86
MA0074.1	MA0074.1	0.59
MA0076.1	MA0076.1	0.273
MA0077.1	MA0077.1	0.46
MA0078.1	MA0078.1	0.892
MA0079.2	MA0079.2	0.918
MA0080.2	MA0080.2	2.70394e-11
MA0081.1	MA0081.1	0.052
MA0083.1	MA0083.1	0.0317
MA0084.1	MA0084.1	0.178
MA0087.1	MA0087.1	0.961
MA0088.1	MA0088.1	0.018
MA0090.1	MA0090.1	0.0273
MA0091.1	MA0091.1	0.379
MA0092.1	MA0092.1	0.38
MA0093.1	MA0093.1	0.705
MA0099.2	MA0099.2	0.00465
MA0100.1	MA0100.1	0.099
MA0101.1	MA0101.1	0.0463
MA0102.2	MA0102.2	0.006
MA0103.1	MA0103.1	7.40395e-5
MA0104.2	MA0104.2	0.556
MA0105.1	MA0105.1	5.36169e-6
MA0106.1	MA0106.1	0.919
MA0107.1	MA0107.1	0.00632
MA0108.2	MA0108.2	6.62708e-11
MA0111.1	MA0111.1	0.509
MA0112.2	MA0112.2	0.067
MA0113.1	MA0113.1	0.887
MA0114.1	MA0114.1	0.0708
MA0115.1	MA0115.1	0.566
MA0116.1	MA0116.1	0.00193
MA0117.1	MA0117.1	0.338
MA0119.1	MA0119.1	0.9
MA0122.1	MA0122.1	0.489
MA0124.1	MA0124.1	0.509
MA0125.1	MA0125.1	0.984
MA0131.1	MA0131.1	0.425
MA0135.1	MA0135.1	0.388
MA0136.1	MA0136.1	9.29117e-10
MA0137.2	MA0137.2	0.25
MA0138.2	MA0138.2	0.324
MA0139.1	MA0139.1	0.00333
MA0140.1	MA0140.1	0.058
MA0141.1	MA0141.1	0.684
MA0142.1	MA0142.1	0.176
MA0143.1	MA0143.1	0.876
MA0144.1	MA0144.1	0.0929
MA0145.1	MA0145.1	0.288
MA0146.1	MA0146.1	0.487
MA0147.1	MA0147.1	0.727
MA0148.1	MA0148.1	0.00177
MA0149.1	MA0149.1	0.39
MA0150.1	MA0150.1	0.00846
MA0152.1	MA0152.1	0.0378
MA0153.1	MA0153.1	0.787
MA0154.1	MA0154.1	0.00355
MA0155.1	MA0155.1	0.769
MA0156.1	MA0156.1	5.6275e-5
MA0157.1	MA0157.1	0.00705
MA0159.1	MA0159.1	0.0094
MA0160.1	MA0160.1	0.0493
MA0162.1	MA0162.1	0.719
MA0163.1	MA0163.1	0.031
MA0164.1	MA0164.1	0.972
MA0258.1	MA0258.1	0.0128
MA0259.1	MA0259.1	0.665

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12008

Novel motif	Logo	P-value
1	1	0.586
10	10	0.62
100	100	0.82
101	101	0.256
102	102	0.515
103	103	0.216
104	104	0.787
105	105	0.0658
106	106	0.00107
107	107	0.52
108	108	0.533
109	109	0.29
11	11	0.585
110	110	0.464
111	111	0.438
112	112	0.0436
113	113	0.899
114	114	0.0422
115	115	0.759
116	116	0.468
117	117	0.636
118	118	0.204
119	119	0.319
12	12	0.547
120	120	0.151
121	121	0.489
122	122	0.025
123	123	0.00306
124	124	0.0142
125	125	0.519
126	126	0.968
127	127	0.466
128	128	0.0789
129	129	0.0681
13	13	0.875
130	130	0.0528
131	131	0.965
132	132	0.915
133	133	0.749
134	134	0.247
135	135	0.264
136	136	0.643
137	137	0.126
138	138	0.0662
139	139	0.0033
14	14	0.286
140	140	0.125
141	141	0.292
142	142	0.948
143	143	0.359
144	144	0.834
145	145	0.68
146	146	0.857
147	147	0.34
148	148	0.17
149	149	0.593
15	15	0.127
150	150	0.833
151	151	0.316
152	152	0.341
153	153	0.38
154	154	0.875
155	155	0.00638
156	156	0.0819
157	157	0.0943
158	158	0.0275
159	159	0.369
16	16	0.872
160	160	0.558
161	161	0.67
162	162	0.351
163	163	0.704
164	164	0.989
165	165	0.373
166	166	0.928
167	167	0.0916
168	168	0.29
169	169	0.0469
17	17	0.338
18	18	0.53
19	19	0.957
2	2	0.807
20	20	0.778
21	21	0.26
22	22	0.715
23	23	0.0294
24	24	0.663
25	25	0.444
26	26	0.972
27	27	0.368
28	28	0.306
29	29	0.719
3	3	0.361
30	30	0.851
31	31	0.426
32	32	0.0663
33	33	0.842
34	34	0.754
35	35	0.136
36	36	0.0446
37	37	0.524
38	38	0.373
39	39	0.656
4	4	0.237
40	40	0.0793
41	41	0.00765
42	42	0.405
43	43	0.3
44	44	0.313
45	45	0.153
46	46	0.251
47	47	0.544
48	48	0.755
49	49	0.117
5	5	0.125
50	50	0.479
51	51	0.447
52	52	0.402
53	53	0.131
54	54	0.493
55	55	0.365
56	56	0.66
57	57	0.326
58	58	0.0856
59	59	0.338
6	6	0.878
60	60	0.0371
61	61	0.703
62	62	0.077
63	63	0.518
64	64	0.398
65	65	0.254
66	66	0.413
67	67	0.584
68	68	0.472
69	69	0.519
7	7	0.32
70	70	0.00112
71	71	0.385
72	72	0.171
73	73	0.794
74	74	0.634
75	75	0.351
76	76	0.618
77	77	0.423
78	78	0.289
79	79	0.149
8	8	0.95
80	80	0.0991
81	81	0.542
82	82	0.00968
83	83	0.49
84	84	0.787
85	85	0.00462
86	86	0.305
87	87	0.352
88	88	0.951
89	89	0.261
9	9	0.881
90	90	0.276
91	91	0.324
92	92	0.113
93	93	0.892
94	94	0.167
95	95	0.879
96	96	0.27
97	97	0.596
98	98	0.0982
99	99	0.0077

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12008

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000165 human skeletal muscle satellite cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000035 (single fate stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000188 (cell of skeletal muscle)
0000222 (mesodermal cell)
0000594 (skeletal muscle satellite cell)
0000355 (multi-potent skeletal muscle stem cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001134 (skeletal muscle tissue)
0002100 (trunk)
0000483 (epithelium)
0000926 (mesoderm)
0000479 (tissue)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0000486 (multilaminar epithelium)
0003104 (mesenchyme)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0001015 (musculature)
0002532 (epiblast (generic))
0002329 (somite)
0002204 (musculoskeletal system)
0000383 (musculature of body)
0003077 (paraxial mesoderm)
0004290 (dermomyotome)
0009142 (entire embryonic mesenchyme)
0006603 (presumptive mesoderm)
0003082 (myotome)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr1:203055129..203055147,-!p1@MYOG!2.00!98.95!MYOG;;chr8:25902876..25902936,-!p1@EBF2!1.76!55.99!EBF2;;chr12:66218255..66218304,+!p3@HMGA2!1.65!113.35!HMGA2;;chr7:19157248..19157268,-!p1@TWIST1!1.45!74.06!TWIST1;;chr12:66218212..66218244,+!p5@HMGA2!1.42!36.82!HMGA2;;chr1:170633348..170633399,+!p2@PRRX1!1.35!29.15!PRRX1;;chr12:66218183..66218209,+!p4@HMGA2!1.29!35.37!HMGA2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.28!17.90!HOXC5;;chr6:34204921..34204939,+!p3@HMGA1!1.26!504.29!HMGA1;;chr12:66218598..66218645,+!p2@HMGA2!1.26!78.83!HMGA2;;chr11:17741111..17741124,+!p1@MYOD1!1.25!16.79!MYOD1;;chr1:170632285..170632309,+!p1@PRRX1!1.22!17.64!PRRX1;;chr15:42749722..42749739,-!p2@ZFP106!1.19!25.82!ZFP106;;chr2:5832508..5832524,+!p1@SOX11!1.16!13.30!SOX11;;chr7:15726296..15726315,-!p1@MEOX2!1.15!13.12!MEOX2;;chr17:1959369..1959388,+!p2@HIC1!1.14!33.66!HIC1;;chr14:61116183..61116208,-!p1@SIX1!1.12!45.94!SIX1;;chr1:170633262..170633285,+!p3@PRRX1!1.08!12.70!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!1.01!9.20!HOXC8;;chr15:57511609..57511651,+!p2@TCF12!0.98!14.74!TCF12;;chr7:27192185..27192209,-!p1@HOXA3!0.95!7.93!HOXA3;;chr12:54393880..54393962,+!p1@HOXC9!0.94!7.67!HOXC9;;chr7:27205106..27205134,-!p2@HOXA9!0.91!7.16!HOXA9;;chr1:40105299..40105326,-!p1@HEYL!0.91!7.16!HEYL;;chr5:158526917..158526932,-!p1@EBF1!0.90!17.90!EBF1;;chr7:15726243..15726293,-!p2@MEOX2!0.90!6.99!MEOX2;;chr7:27205136..27205164,-!p1@HOXA9!0.90!6.90!HOXA9;;chr17:1958388..1958404,+!p1@HIC1!0.88!44.57!HIC1;;chr8:49833948..49833973,-!p2@SNAI2!0.88!43.81!SNAI2;;chr17:59477233..59477263,+!p1@TBX2!0.88!21.56!TBX2;;chr3:12330560..12330579,+!p1@PPARG!0.88!7.59!PPARG;;chr11:46299199..46299233,+!p1@CREB3L1!0.87!35.03!CREB3L1;;chr2:176994408..176994492,+!p1@HOXD8!0.87!6.48!HOXD8;;chr6:34204672..34204692,+!p1@HMGA1!0.84!711.47!HMGA1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.84!6.39!GLIS1;;chr2:102091566..102091581,-!p1@RFX8!0.84!5.97!RFX8;;chr3:147127142..147127168,+!p1@ZIC1!0.84!5.88!ZIC1;;chr21:36421535..36421610,-!p2@RUNX1!0.83!21.56!RUNX1;;chr7:19157043..19157088,-!p2@TWIST1!0.83!15.34!TWIST1;;chr12:66218378..66218401,+!p6@HMGA2!0.83!9.12!HMGA2;;chr8:49833978..49833996,-!p1@SNAI2!0.82!123.58!SNAI2;;chr3:12329358..12329393,+!p3@PPARG!0.82!14.57!PPARG;;chr9:16870659..16870675,-!p2@BNC2!0.82!6.99!BNC2;;chr12:66218836..66218888,+!p1@HMGA2!0.81!55.40!HMGA2;;chr10:131762504..131762555,-!p1@EBF3!0.81!5.45!EBF3;;chr12:66218420..66218439,+!p12@HMGA2!0.81!5.45!HMGA2;;chr1:170632250..170632277,+!p7@PRRX1!0.81!5.45!PRRX1;;chr1:170632959..170632987,+!p4@PRRX1!0.80!5.88!PRRX1;;chr12:66218152..66218174,+!p10@HMGA2!0.78!5.37!HMGA2;;chr21:47063625..47063658,+!p1@PCBP3!0.77!23.18!PCBP3;;chr12:66218573..66218596,+!p7@HMGA2!0.77!7.67!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.77!4.94!HMGA2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.77!4.86!HOXC5;;chr3:12329397..12329433,+!p2@PPARG!0.76!11.59!PPARG;;chr19:45260775..45260838,+!p5@BCL3!0.75!6.14!BCL3;;chr1:170632477..170632506,+!p6@PRRX1!0.75!4.60!PRRX1;;chr9:16870710..16870763,-!p1@BNC2!0.74!8.27!BNC2;;chr11:46299539..46299620,+!p2@CREB3L1!0.74!7.93!CREB3L1;;chr2:239756671..239756732,+!p1@TWIST2!0.73!15.34!TWIST2;;chr16:86600426..86600441,+!p1@FOXC2!0.73!11.85!FOXC2;;chr9:16705069..16705086,-!p3@BNC2!0.73!4.43!BNC2;;chr17:46682321..46682362,-!p1@HOXB6!0.73!4.35!HOXB6;;chr12:54402790..54402805,+!p2@HOXC8!0.72!4.26!HOXC8;;chr12:54378923..54378966,+!p1@HOXC10!0.71!4.18!HOXC10;;chr2:119604456..119604501,-!p2@EN1!0.71!4.18!EN1;;chr3:147111231..147111281,+!p3@ZIC1!0.71!4.09!ZIC1;;chr1:119530493..119530572,-!p1@TBX15!0.71!4.09!TBX15;;chr4:299227..299272,-!p1@ZNF732!0.70!4.01!ZNF732;;chr12:66218443..66218461,+!p8@HMGA2!0.69!5.11!HMGA2;;chr12:54394309..54394336,+!p2@HOXC9!0.69!3.92!HOXC9;;chr12:54410948..54410992,+!p3@HOXC5!0.69!3.92!HOXC5;;chr2:121493425..121493474,+!p1@GLI2!0.68!9.20!GLI2;;chr11:65686802..65686818,+!p6@DRAP1!0.68!7.16!DRAP1;;chr20:50721803..50721857,-!p2@ZFP64!0.68!6.31!ZFP64;;chr2:45236540..45236577,-!p1@SIX2!0.68!3.84!SIX2;;chr8:128748308..128748324,+!p2@MYC!0.66!115.06!MYC;;chr7:15725757..15725828,-!p5@MEOX2!0.66!3.58!MEOX2;;chr2:68592406..68592424,+!p1@PLEK!0.66!3.58!PLEK;;chr11:65686732..65686756,+!p2@DRAP1!0.65!16.70!DRAP1;;chr2:19558373..19558392,-!p1@OSR1!0.65!10.57!OSR1;;chr6:45390025..45390076,+!p2@RUNX2!0.65!9.29!RUNX2;;chr6:85474299..85474324,-!p1@TBX18!0.65!6.73!TBX18;;chr15:83953397..83953425,-!p1@BNC1!0.65!4.09!BNC1;;chr1:170632723..170632739,+!p8@PRRX1!0.65!3.49!PRRX1;;chr14:61116168..61116180,-!p2@SIX1!0.64!4.01!SIX1;;chr11:17741254..17741282,+!p2@MYOD1!0.64!3.41!MYOD1;;chr17:59477403..59477414,+!p4@TBX2!0.64!3.41!TBX2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.64!3.32!PEG3;;chr1:170632439..170632465,+!p11@PRRX1!0.64!3.32!PRRX1;;chr2:223163706..223163730,-!p1@PAX3!0.63!3.24!PAX3;;chr11:125034640..125034655,+!p1@PKNOX2!0.63!3.24!PKNOX2;;chr12:54394059..54394088,+!p3@HOXC9!0.62!3.15!HOXC9;;chr16:1031762..1031781,+!p1@SOX8!0.62!3.15!SOX8;;chr5:158527104..158527135,-!p4@EBF1!0.62!3.15!EBF1;;chr17:41277372..41277418,-!p1@BRCA1!0.61!12.95!BRCA1;;chr17:59477197..59477212,+!p2@TBX2!0.61!5.80!TBX2;;chr17:59477275..59477286,+!p3@TBX2!0.61!4.35!TBX2;;chr15:67357924..67357952,+!p2@SMAD3!0.60!23.44!SMAD3;;chr11:65667884..65667895,-!p2@FOSL1!0.60!13.64!FOSL1;;chr6:85473156..85473210,-!p2@TBX18!0.60!3.75!TBX18;;chr12:81110684..81110700,+!p1@MYF5!0.59!2.90!MYF5;;chr3:147111198..147111225,+!p4@ZIC1!0.59!2.90!ZIC1;;chr6:31126291..31126399,+!p1@TCF19!0.58!32.47!TCF19;;chr12:3068544..3068597,+!p1@TEAD4!0.58!20.20!TEAD4;;chr2:239148671..239148686,-!p1@HES6!0.58!12.10!HES6;;chr2:239756739..239756755,+!p2@TWIST2!0.58!5.37!TWIST2;;chr19:22817119..22817145,+!p1@ZNF492!0.58!5.11!ZNF492;;chr19:46801639..46801699,+!p1@HIF3A!0.58!2.81!HIF3A;;chr19:47523058..47523114,+!p1@NPAS1!0.58!2.81!NPAS1;;chr12:66218469..66218477,+!p16@HMGA2!0.58!2.81!HMGA2;;chr12:66357214..66357233,+!p13@HMGA2!0.58!2.81!HMGA2;;chr9:16728161..16728185,-!p4@BNC2!0.58!2.81!BNC2;;chr9:16728327..16728338,-!p5@BNC2!0.58!2.81!BNC2;;chr20:42295713..42295738,+!p2@MYBL2!0.57!19.43!MYBL2;;chr8:77593474..77593612,+!p1@ZFHX4!0.57!13.64!ZFHX4;;chr17:46622205..46622218,-!p3@HOXB2!0.57!3.24!HOXB2;;chr12:54447637..54447659,+!p4@HOXC4!0.57!2.73!HOXC4;;chr12:115121962..115121987,-!p1@TBX3!0.56!27.61!TBX3;;chr5:88178983..88179012,-!p1@MEF2C!0.56!25.06!MEF2C;;chr12:2986206..2986258,-!p2@FOXM1!0.56!19.69!FOXM1;;chr14:62162285..62162296,+!p3@HIF1A!0.56!16.79!HIF1A;;chr7:42276822..42276895,-!p2@GLI3!0.56!9.20!GLI3;;chr1:247171347..247171366,-!p2@ZNF695!0.56!5.37!ZNF695;;chr5:321810..321877,+!p1@AHRR!0.55!9.63!AHRR;;chr7:27183263..27183284,-!p2@HOXA5!0.55!2.56!HOXA5;;chr17:41622765..41622821,-!p2@ETV4!0.54!4.18!ETV4;;chr11:47400078..47400106,-!p1@SPI1!0.54!2.47!SPI1;;chr12:66218904..66218913,+!p11@HMGA2!0.54!2.47!HMGA2;;chr12:2986275..2986363,-!p1@FOXM1!0.53!30.34!FOXM1;;chr15:96873984..96873999,+!p3@NR2F2!0.53!22.16!NR2F2;;chr8:116681409..116681431,-!p2@TRPS1!0.53!7.76!TRPS1;;chr11:47279504..47279563,+!p1@NR1H3!0.53!6.39!NR1H3;;chr11:113930425..113930471,+!p1@ZBTB16!0.53!3.84!ZBTB16;;chr17:46687959..46688007,-!p2@HOXB7!0.53!3.58!HOXB7;;chr11:17741084..17741094,+!p3@MYOD1!0.53!2.39!MYOD1;;chr5:72744594..72744609,-!p1@FOXD1!0.52!13.38!FOXD1;;chr18:22932080..22932170,-!p1@ZNF521!0.52!12.36!ZNF521;;chr2:5832493..5832507,+!p2@SOX11!0.52!2.30!SOX11;;chr1:170633058..170633084,+!p5@PRRX1!0.52!2.30!PRRX1;;chr5:133450365..133450444,+!p1@TCF7!0.51!13.04!TCF7;;chr17:46622114..46622138,-!p4@HOXB2!0.51!3.84!HOXB2;;chr7:27183291..27183324,-!p1@HOXA5!0.51!2.22!HOXA5;;chr10:119303078..119303169,+!p2@EMX2!0.51!2.22!EMX2;;chr12:54380036..54380091,+!p4@HOXC10!0.51!2.22!HOXC10;;chr3:12329339..12329356,+!p5@PPARG!0.51!2.22!PPARG;;chr2:121493492..121493537,+!p2@GLI2!0.50!4.09!GLI2;;chr17:46655704..46655718,-!p2@HOXB4!0.50!3.58!HOXB4;;chr17:46622229..46622257,-!p6@HOXB2!0.50!2.64!HOXB2;;chr3:25470156..25470227,+!p2@RARB!0.50!2.13!RARB;;chr12:54380404..54380433,+!p3@HOXC10!0.50!2.13!HOXC10;;chr1:151032860..151032918,+!p1@MLLT11!0.49!33.32!MLLT11;;chr9:4300050..4300118,-!p1@GLIS3!0.49!17.81!GLIS3;;chr19:49865646..49865718,-!p1@TEAD2!0.48!23.01!TEAD2;;chr19:1592714..1592762,-!p1@MBD3!0.48!20.54!MBD3;;chr5:138609782..138609826,+!p5@MATR3!0.48!17.22!MATR3;;chr12:3069037..3069119,+!p2@TEAD4!0.48!8.78!TEAD4;;chr1:61547894..61547968,+!p2@NFIA!0.48!7.33!NFIA;;chr8:106330656..106330684,+!p1@ZFPM2!0.48!6.56!ZFPM2;;chr2:169312600..169312606,+!p2@CERS6!0.48!3.66!CERS6;;chr17:41622925..41622976,-!p3@ETV4!0.48!3.41!ETV4;;chr19:23299814..23299844,+!p1@ZNF730!0.48!2.64!ZNF730;;chr17:46675558..46675577,-!p2@HOXB6!0.48!2.05!HOXB6;;chr11:125034605..125034636,+!p2@PKNOX2!0.48!2.05!PKNOX2;;chr19:13134772..13134822,+!p2@NFIX!0.47!3.24!NFIX;;chr6:45390077..45390105,+!p9@RUNX2!0.47!2.73!RUNX2;;chr1:221052840..221052875,+!p4@HLX!0.47!2.47!HLX;;chr11:46299186..46299195,+!p3@CREB3L1!0.47!2.30!CREB3L1;;chr1:170632137..170632172,+!p10@PRRX1!0.47!1.96!PRRX1;;chr2:24714729..24714761,+!p1@NCOA1!0.47!1.96!NCOA1;;chr7:15726220..15726236,-!p4@MEOX2!0.47!1.96!MEOX2;;chr17:41622731..41622764,-!p5@ETV4!0.47!1.96!ETV4;;chr4:1873100..1873152,+!p1@WHSC1!0.46!19.43!WHSC1;;chr14:55493763..55493824,-!p1@WDHD1!0.46!19.18!WDHD1;;chr17:61919985..61920012,-!p3@SMARCD2!0.46!5.71!SMARCD2;;chr20:31350184..31350200,+!p1@DNMT3B!0.46!4.77!DNMT3B;;chr2:185463247..185463263,+!p1@ZNF804A!0.46!3.92!ZNF804A;;chr1:247171316..247171336,-!p3@ZNF695!0.46!3.24!ZNF695;;chr5:158526459..158526481,-!p2@EBF1!0.46!2.81!EBF1;;chr17:46622440..46622477,-!p5@HOXB2!0.46!2.22!HOXB2;;chr7:27196267..27196311,-!p1@HOXA7!0.46!1.87!HOXA7;;chr12:54402729..54402743,+!p3@HOXC8!0.46!1.87!HOXC8;;chr14:62162258..62162269,+!p2@HIF1A!0.45!24.12!HIF1A;;chr19:20188776..20188826,+!p1@ZNF90!0.45!6.22!ZNF90;;chr12:54447599..54447630,+!p3@HOXC4!0.45!2.39!HOXC4;;chr12:54379029..54379057,+!p2@HOXC10!0.45!1.79!HOXC10;;chr15:57511589..57511608,+!p4@TCF12!0.45!1.79!TCF12;;chr19:2867325..2867348,+!p1@ZNF556!0.45!1.79!ZNF556;;ch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RUNX1!0.15!0.43!RUNX1;;chr10:119302508..119302559,+!p5@EMX2!0.15!0.43!EMX2;;chr10:131762558..131762569,-!p5@EBF3!0.15!0.43!EBF3;;chr10:131762589..131762601,-!p3@EBF3!0.15!0.43!EBF3;;chr10:31607811..31607837,+!p6@ZEB1!0.15!0.43!ZEB1;;chr10:35416223..35416234,+!p12@CREM!0.15!0.43!CREM;;chr11:113930401..113930422,+!p3@ZBTB16!0.15!0.43!ZBTB16;;chr12:3068979..3068993,+!p11@TEAD4!0.15!0.43!TEAD4;;chr12:54378864..54378884,+!p6@HOXC10!0.15!0.43!HOXC10;;chr12:57853596..57853613,+!p3@GLI1!0.15!0.43!GLI1;;chr12:66357586..66357600,+!p20@HMGA2!0.15!0.43!HMGA2;;chr12:80084018..80084035,-!p17@PAWR!0.15!0.43!PAWR;;chr14:37132241..37132304,+!p3@PAX9!0.15!0.43!PAX9;;chr5:124081979..124082021,-!p7@ZNF608!0.15!0.43!ZNF608;;chr5:124082470..124082483,-!p8@ZNF608!0.15!0.43!ZNF608;;chr5:142780189..142780223,-!p6@NR3C1!0.15!0.43!NR3C1;;chr5:158526709..158526741,-!p7@EBF1!0.15!0.43!EBF1;;chr5:2751762..2751784,-!p1@IRX2!0.15!0.43!IRX2;;chr6:1610178..1610190,+!p5@FOXC1!0.15!0.43!FOXC1;;chr7:14029034..14029087,-!p5@ETV1!0.15!0.43!ETV1;;chr7:27170359..27170381,-!p1@HOXA4!0.15!0.43!HOXA4;;chr7:27183191..27183214,-!p4@HOXA5!0.15!0.43!HOXA5;;chr8:30890810..30890880,-!p1@PURG!0.15!0.43!PURG;;chr8:57123898..57123909,-!p3@PLAG1!0.15!0.43!PLAG1;;chr8:72756194..72756208,-!p9@MSC!0.15!0.43!MSC;;chr8:77593750..77593757,+!p3@ZFHX4!0.15!0.43!ZFHX4;;chr8:80680061..80680075,-!p4@HEY1!0.15!0.43!HEY1;;chr9:1051481..1051496,+!p3@DMRT2!0.15!0.43!DMRT2;;chr9:14314066..14314075,-!p11@NFIB!0.15!0.43!NFIB;;chr9:14314946..14314983,-!p8@NFIB!0.15!0.43!NFIB;;chr12:10875831..10876025,-!p1@CSDA!0.14!104.23!CSDA;;chr17:3571863..3571881,-!p1@TAX1BP3!0.14!88.29!TAX1BP3;;chr2:191878874..191878938,-!p1@STAT1!0.14!67.67!STAT1;;chr22:41864662..41864708,-!p1@PHF5A!0.14!53.01!PHF5A;;chr11:128392085..128392232,-!p1@ETS1!0.14!41.85!ETS1;;chr19:1863568..1863586,-!p1@KLF16!0.14!40.91!KLF16;;chr2:70314579..70314590,+!p2@PCBP1!0.14!18.66!PCBP1;;chr2:75937994..75938054,-!p1@GCFC2!0.14!17.05!GCFC2;;chr16:67226019..67226127,+!p1@E2F4!0.14!15.68!E2F4;;chr12:77459306..77459365,-!p1@E2F7!0.14!15.00!E2F7;;chr6:41514078..41514158,+!p1@FOXP4!0.14!10.57!FOXP4;;chrX:128657413..128657456,-!p2@SMARCA1!0.14!10.06!SMARCA1;;chr3:141747459..141747475,-!p1@TFDP2!0.14!9.63!TFDP2;;chr5:142784003..142784065,-!p2@NR3C1!0.14!9.46!NR3C1;;chr11:76092097..76092183,-!p1@PRKRIR!0.14!9.37!PRKRIR;;chr15:50647274..50647336,-!p1@GABPB1!0.14!8.01!GABPB1;;chr20:48599506..48599526,+!p1@SNAI1!0.14!7.33!SNAI1;;chr21:27107259..27107299,+!p1@GABPA!0.14!6.65!GABPA;;chr22:50247449..50247515,+!p1@ZBED4!0.14!4.94!ZBED4;;chr19:15543565..15543579,-!p2@WIZ!0.14!4.77!WIZ;;chr8:57123815..57123867,-!p1@PLAG1!0.14!4.35!PLAG1;;chr1:8483878..8483907,-!p4@RERE!0.14!4.01!RERE;;chr8:146012660..146012711,-!p1@ZNF34!0.14!3.32!ZNF34;;chr1:35656508..35656584,-!p2@SFPQ!0.14!3.15!SFPQ;;chr19:21106081..21106115,+!p2@ZNF85!0.14!2.90!ZNF85;;chr16:30538079..30538124,-!p3@ZNF768!0.14!2.81!ZNF768;;chr22:22863052..22863133,-!p1@ZNF280B!0.14!2.47!ZNF280B;;chr13:45011349..45011391,-!p4@TSC22D1!0.14!2.22!TSC22D1;;chr19:22235279..22235301,+!p1@ZNF257!0.14!1.53!ZNF257;;chr15:96874063..96874074,+!p10@NR2F2!0.14!1.45!NR2F2;;chr1:8483849..8483868,-!p14@RERE!0.14!1.19!RERE;;

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FF:11397-118D2: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:37, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0