FF:10562-108A4: Difference between revisions

Revision as of 14:29, 29 June 2012

Name:	small cell lung carcinoma cell line:WA-hT
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	lung
dev stage	NA
sex	male
age	56
cell type	unclassifiable
cell line	WA-hT
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.334
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.441
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0611
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0753
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.218
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0.0611
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.209
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.214
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.0611
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0235
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.272
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0.0611
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0114
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0624
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.0611
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0168
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.532
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.115
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0.0305
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0.162
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0.932
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11812

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	9.86675e-6
MA0003.1	MA0003.1	0.416
MA0004.1	MA0004.1	0.15
MA0006.1	MA0006.1	0.586
MA0007.1	MA0007.1	0.49
MA0009.1	MA0009.1	0.626
MA0014.1	MA0014.1	0.692
MA0017.1	MA0017.1	0.0171
MA0018.2	MA0018.2	0.00215
MA0019.1	MA0019.1	0.816
MA0024.1	MA0024.1	9.9188e-5
MA0025.1	MA0025.1	0.00823
MA0027.1	MA0027.1	0.902
MA0028.1	MA0028.1	0.194
MA0029.1	MA0029.1	0.413
MA0030.1	MA0030.1	0.00918
MA0031.1	MA0031.1	0.0442
MA0035.2	MA0035.2	0.958
MA0038.1	MA0038.1	2.10758e-4
MA0039.2	MA0039.2	0.156
MA0040.1	MA0040.1	0.654
MA0041.1	MA0041.1	0.23
MA0042.1	MA0042.1	0.166
MA0043.1	MA0043.1	0.0126
MA0046.1	MA0046.1	0.651
MA0047.2	MA0047.2	0.0123
MA0048.1	MA0048.1	0.156
MA0050.1	MA0050.1	0.00788
MA0051.1	MA0051.1	0.00313
MA0052.1	MA0052.1	0.678
MA0055.1	MA0055.1	0.617
MA0057.1	MA0057.1	0.459
MA0058.1	MA0058.1	0.127
MA0059.1	MA0059.1	0.824
MA0060.1	MA0060.1	4.4212e-20
MA0061.1	MA0061.1	0.00742
MA0062.2	MA0062.2	0.0322
MA0065.2	MA0065.2	0.0104
MA0066.1	MA0066.1	0.0312
MA0067.1	MA0067.1	0.757
MA0068.1	MA0068.1	0.191
MA0069.1	MA0069.1	0.862
MA0070.1	MA0070.1	0.0324
MA0071.1	MA0071.1	0.265
MA0072.1	MA0072.1	0.454
MA0073.1	MA0073.1	0.712
MA0074.1	MA0074.1	0.132
MA0076.1	MA0076.1	0.0224
MA0077.1	MA0077.1	0.0476
MA0078.1	MA0078.1	0.784
MA0079.2	MA0079.2	0.271
MA0080.2	MA0080.2	0.00513
MA0081.1	MA0081.1	0.0944
MA0083.1	MA0083.1	0.108
MA0084.1	MA0084.1	0.743
MA0087.1	MA0087.1	0.573
MA0088.1	MA0088.1	0.285
MA0090.1	MA0090.1	0.00219
MA0091.1	MA0091.1	0.0485
MA0092.1	MA0092.1	0.0593
MA0093.1	MA0093.1	0.0984
MA0099.2	MA0099.2	1.4302e-8
MA0100.1	MA0100.1	0.23
MA0101.1	MA0101.1	0.0329
MA0102.2	MA0102.2	0.4
MA0103.1	MA0103.1	6.15433e-4
MA0104.2	MA0104.2	0.35
MA0105.1	MA0105.1	2.31496e-5
MA0106.1	MA0106.1	0.141
MA0107.1	MA0107.1	0.0195
MA0108.2	MA0108.2	0.0328
MA0111.1	MA0111.1	0.464
MA0112.2	MA0112.2	5.81755e-5
MA0113.1	MA0113.1	0.0485
MA0114.1	MA0114.1	0.0581
MA0115.1	MA0115.1	0.477
MA0116.1	MA0116.1	1.78299e-4
MA0117.1	MA0117.1	0.666
MA0119.1	MA0119.1	0.0584
MA0122.1	MA0122.1	0.332
MA0124.1	MA0124.1	0.774
MA0125.1	MA0125.1	0.0338
MA0131.1	MA0131.1	0.346
MA0135.1	MA0135.1	0.915
MA0136.1	MA0136.1	0.843
MA0137.2	MA0137.2	0.0843
MA0138.2	MA0138.2	0.957
MA0139.1	MA0139.1	0.301
MA0140.1	MA0140.1	0.345
MA0141.1	MA0141.1	0.042
MA0142.1	MA0142.1	0.224
MA0143.1	MA0143.1	0.156
MA0144.1	MA0144.1	0.286
MA0145.1	MA0145.1	0.229
MA0146.1	MA0146.1	0.32
MA0147.1	MA0147.1	0.729
MA0148.1	MA0148.1	0.0102
MA0149.1	MA0149.1	0.126
MA0150.1	MA0150.1	8.58789e-4
MA0152.1	MA0152.1	0.933
MA0153.1	MA0153.1	0.0925
MA0154.1	MA0154.1	6.0733e-4
MA0155.1	MA0155.1	0.528
MA0156.1	MA0156.1	0.44
MA0157.1	MA0157.1	0.248
MA0159.1	MA0159.1	0.364
MA0160.1	MA0160.1	0.164
MA0162.1	MA0162.1	0.196
MA0163.1	MA0163.1	4.60268e-8
MA0164.1	MA0164.1	0.35
MA0258.1	MA0258.1	0.00361
MA0259.1	MA0259.1	0.543

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11812

Novel motif	Logo	P-value
1	1	0.143
10	10	0.13
100	100	0.834
101	101	0.492
102	102	0.254
103	103	0.0342
104	104	0.343
105	105	0.498
106	106	0.00445
107	107	0.0592
108	108	0.632
109	109	0.14
11	11	0.0873
110	110	0.23
111	111	0.0138
112	112	0.0919
113	113	0.408
114	114	7.46577e-4
115	115	0.912
116	116	0.163
117	117	0.122
118	118	0.178
119	119	0.164
12	12	0.508
120	120	0.24
121	121	0.6
122	122	0.329
123	123	0.243
124	124	0.859
125	125	0.853
126	126	0.452
127	127	0.356
128	128	0.0478
129	129	0.569
13	13	0.261
130	130	0.73
131	131	0.795
132	132	0.997
133	133	0.373
134	134	0.979
135	135	0.00607
136	136	0.324
137	137	0.0222
138	138	0.845
139	139	0.122
14	14	0.813
140	140	0.0165
141	141	0.77
142	142	0.687
143	143	0.376
144	144	0.0287
145	145	0.121
146	146	0.321
147	147	0.721
148	148	0.024
149	149	0.0747
15	15	0.113
150	150	0.46
151	151	0.383
152	152	0.0781
153	153	0.374
154	154	0.88
155	155	0.798
156	156	0.272
157	157	0.676
158	158	0.763
159	159	0.0372
16	16	0.133
160	160	0.0783
161	161	0.329
162	162	0.776
163	163	0.854
164	164	0.0458
165	165	0.0679
166	166	0.332
167	167	0.652
168	168	0.0871
169	169	0.0137
17	17	0.25
18	18	0.28
19	19	0.182
2	2	0.76
20	20	0.945
21	21	0.166
22	22	0.174
23	23	0.02
24	24	0.141
25	25	0.719
26	26	0.0583
27	27	0.877
28	28	0.93
29	29	0.289
3	3	0.0302
30	30	0.865
31	31	0.494
32	32	7.34074e-4
33	33	0.701
34	34	0.483
35	35	0.126
36	36	0.0758
37	37	0.0571
38	38	0.379
39	39	0.0684
4	4	0.627
40	40	0.407
41	41	0.164
42	42	0.122
43	43	0.0903
44	44	0.493
45	45	0.552
46	46	0.0644
47	47	0.243
48	48	0.156
49	49	0.138
5	5	0.232
50	50	0.455
51	51	0.219
52	52	0.154
53	53	0.567
54	54	0.233
55	55	0.0474
56	56	0.564
57	57	0.286
58	58	0.146
59	59	0.0413
6	6	0.49
60	60	0.0461
61	61	0.685
62	62	0.0436
63	63	0.121
64	64	0.555
65	65	0.172
66	66	0.0945
67	67	0.543
68	68	0.94
69	69	0.874
7	7	0.462
70	70	0.0657
71	71	0.0678
72	72	0.434
73	73	0.0884
74	74	0.0484
75	75	0.184
76	76	0.651
77	77	0.0894
78	78	0.355
79	79	0.0324
8	8	0.0717
80	80	0.077
81	81	0.0897
82	82	0.0193
83	83	0.707
84	84	0.714
85	85	0.00313
86	86	0.176
87	87	0.872
88	88	0.427
89	89	0.0998
9	9	0.139
90	90	0.0365
91	91	0.162
92	92	0.0476
93	93	0.883
94	94	0.145
95	95	0.258
96	96	0.135
97	97	0.351
98	98	0.708
99	99	0.607

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11812

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100189 small cell lung cancer cell sample
FF:0102206 small cell lung cancer cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
0050615 (respiratory system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1324 (lung cancer)
305 (carcinoma)
1325 (bronchus cancer)
3905 (lung carcinoma)
5409 (lung small cell carcinoma)
3904 (bronchogenic carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0000926 (mesoderm)
0000479 (tissue)
0001007 (digestive system)
0000064 (organ part)
0000077 (mixed endoderm/mesoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000025 (tube)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0004802 (respiratory tract epithelium)
0005153 (epithelial bud)
0005911 (endo-epithelium)
0004921 (subdivision of digestive tract)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0009569 (subdivision of trunk)
0005291 (embryonic tissue)
0005178 (thoracic cavity element)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0003104 (mesenchyme)
0000115 (lung epithelium)
0000464 (anatomical space)
0001048 (primordium)
0000925 (endoderm)
0005181 (thoracic segment organ)
0006598 (presumptive structure)
0004185 (endodermal part of digestive tract)
0005157 (epithelial fold)
0002532 (epiblast (generic))
0001555 (digestive tract)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0007026 (primitive gut)
0001041 (foregut)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
0009142 (entire embryonic mesenchyme)
0008947 (respiratory primordium)
0003258 (endoderm of foregut)
0005597 (lung primordium)
0006595 (presumptive endoderm)
0006603 (presumptive mesoderm)
0000118 (lung bud)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr12:103351444..103351461,+!p1@ASCL1!2.88!753.30!ASCL1;;chr20:20348740..20348757,+!p1@INSM1!2.16!142.06!INSM1;;chr1:201979743..201979762,+!p1@ELF3!2.10!124.39!ELF3;;chr8:40755333..40755352,-!p1@ZMAT4!2.04!109.30!ZMAT4;;chr8:53166899..53166914,-!p3@ST18!1.77!57.97!ST18;;chr2:122042770..122042785,-!p1@TFCP2L1!1.75!55.40!TFCP2L1;;chrX:30327504..30327509,-!p1@NR0B1!1.75!54.80!NR0B1;;chr1:27240455..27240474,-!p1@NR0B2!1.74!54.50!NR0B2;;chr1:214161272..214161322,+!p1@PROX1!1.64!58.88!PROX1;;chr3:181429704..181429722,+!p1@SOX2!1.64!42.87!SOX2;;chr18:45935720..45935772,-!p1@ZBTB7C!1.64!42.57!ZBTB7C;;chr1:209979467..209979494,-!p1@IRF6!1.62!45.74!IRF6;;chr2:239148671..239148686,-!p1@HES6!1.58!131.94!HES6;;chr1:201979703..201979721,+!p2@ELF3!1.58!36.99!ELF3;;chr17:46667594..46667619,-!p1@HOXB3!1.58!36.99!HOXB3;;chr11:129245526..129245553,+!p1@BARX2!1.51!31.25!BARX2;;chr11:111249993..111250006,-!p1@POU2AF1!1.48!29.44!POU2AF1;;chr18:6414884..6414942,-!p1@L3MBTL4!1.47!35.78!L3MBTL4;;chr6:28321909..28321965,-!p3@ZNF323!1.47!28.53!ZNF323;;chr17:46671108..46671147,-!p1@HOXB5!1.46!27.93!HOXB5;;chr17:46675558..46675577,-!p2@HOXB6!1.45!26.87!HOXB6;;chr17:46703687..46703740,-!p1@HOXB9!1.45!26.87!HOXB9;;chr18:55102628..55102646,+!p2@ONECUT2!1.44!26.72!ONECUT2;;chr17:46703826..46703845,-!p3@HOXB9!1.41!24.76!HOXB9;;chr14:38064429..38064486,-!p1@FOXA1!1.40!24.00!FOXA1;;chr17:46622440..46622477,-!p5@HOXB2!1.39!26.57!HOXB2;;chr17:46622205..46622218,-!p3@HOXB2!1.38!26.27!HOXB2;;chr2:45236540..45236577,-!p1@SIX2!1.38!23.25!SIX2;;chr17:46692457..46692484,-!p2@HOXB8!1.37!22.34!HOXB8;;chr2:5832508..5832524,+!p1@SOX11!1.35!21.44!SOX11;;chr14:61116183..61116208,-!p1@SIX1!1.34!77.44!SIX1;;chr2:176972000..176972025,+!p4@HOXD11!1.33!20.53!HOXD11;;chr2:176973498..176973524,+!p1@HOXD10!1.33!20.53!HOXD10;;chr10:135122906..135122921,+!p4@ZNF511!1.33!20.23!ZNF511;;chr18:55102598..55102623,+!p1@ONECUT2!1.32!19.78!ONECUT2;;chr17:46622229..46622257,-!p6@HOXB2!1.31!22.49!HOXB2;;chr7:156803329..156803362,-!p1@MNX1!1.31!19.63!MNX1;;chr4:109090075..109090095,-!p2@LEF1!1.31!19.47!LEF1;;chr2:177001290..177001315,+!p1@HOXD3!1.30!19.17!HOXD3;;chr3:181429741..181429767,+!p2@SOX2!1.29!18.72!SOX2;;chr12:103352277..103352324,+!p2@ASCL1!1.28!18.27!ASCL1;;chr14:36989427..36989442,-!p1@NKX2-1!1.26!17.36!NKX2-1;;chr17:38020392..38020477,-!p1@IKZF3!1.24!16.45!IKZF3;;chr18:56940611..56940660,-!p1@RAX!1.23!16.15!RAX;;chr1:41827095..41827155,+!p1@FOXO6!1.22!21.29!FOXO6;;chr8:53162037..53162058,-!p5@ST18!1.21!15.10!ST18;;chr11:615570..615721,-!p2@IRF7!1.20!28.98!IRF7;;chr20:51588873..51588953,+!p1@TSHZ2!1.20!19.63!TSHZ2;;chr2:242556880..242556899,-!p5@THAP4!1.20!14.95!THAP4;;chr2:176994408..176994492,+!p1@HOXD8!1.19!14.49!HOXD8;;chr17:46690839..46690884,-!p1@HOXB8!1.19!14.49!HOXB8;;chr5:72744594..72744609,-!p1@FOXD1!1.18!63.56!FOXD1;;chr18:6414849..6414876,-!p2@L3MBTL4!1.17!13.74!L3MBTL4;;chr4:109089901..109089930,-!p3@LEF1!1.16!13.44!LEF1;;chr14:36989358..36989378,-!p3@NKX2-1!1.15!13.28!NKX2-1;;chr19:9609272..9609297,-!p1@ZNF560!1.15!12.98!ZNF560;;chr19:9811125..9811144,-!p2@ZNF812!1.15!12.98!ZNF812;;chr20:22565370..22565388,-!p2@FOXA2!1.13!12.38!FOXA2;;chr21:47063625..47063658,+!p1@PCBP3!1.12!53.29!PCBP3;;chr3:18486354..18486377,-!p2@SATB1!1.12!15.40!SATB1;;chr2:176971685..176971700,+!p6@HOXD11!1.11!11.78!HOXD11;;chr20:62795799..62795819,+!p1@MYT1!1.11!11.78!MYT1;;chr3:40547564..40547616,+!p1@ZNF620!1.10!16.30!ZNF620;;chr16:52581025..52581072,-!p1@TOX3!1.10!11.62!TOX3;;chr1:214161328..214161348,+!p2@PROX1!1.10!11.47!PROX1;;chr6:36355513..36355578,-!p2@ETV7!1.09!14.19!ETV7;;chr6:126070769..126070801,+!p1@HEY2!1.09!12.98!HEY2;;chr10:135122868..135122893,+!p3@ZNF511!1.09!11.32!ZNF511;;chr12:54772960..54773015,-!p3@ZNF385A!1.07!52.69!ZNF385A;;chr14:29235961..29236008,+!p1@FOXG1!1.07!10.87!FOXG1;;chr6:28321971..28321995,-!p1@ZNF323!1.07!10.87!ZNF323;;chr11:63684602..63684664,-!p1@RCOR2!1.06!20.83!RCOR2;;chr6:1610293..1610310,+!p1@FOXC1!1.06!17.66!FOXC1;;chr11:64764435..64764449,-!p1@BATF2!1.06!14.64!BATF2;;chr2:177053386..177053402,+!p1@HOXD1!1.06!10.42!HOXD1;;chr3:114819101..114819121,-!p7@ZBTB20!1.05!10.27!ZBTB20;;chr19:9811101..9811112,-!p3@ZNF812!1.05!10.27!ZNF812;;chr1:40367530..40367597,-!p1@MYCL1!1.03!17.66!MYCL1;;chrX:85403445..85403479,+!p2@DACH2!1.03!9.66!DACH2;;chr7:15726296..15726315,-!p1@MEOX2!1.03!9.66!MEOX2;;chr20:31350184..31350200,+!p1@DNMT3B!1.02!20.08!DNMT3B;;chr20:22565185..22565223,-!p3@FOXA2!1.02!9.51!FOXA2;;chr20:51589133..51589159,+!p2@TSHZ2!1.02!9.51!TSHZ2;;chr2:95963052..95963106,+!p1@KCNIP3!1.01!9.21!KCNIP3;;chr8:60031762..60031803,-!p3@TOX!1.00!13.13!TOX;;chr1:3569072..3569093,+!p1@TP73!1.00!9.06!TP73;;chr1:151804244..151804310,-!p1@RORC!1.00!8.91!RORC;;chr1:40367668..40367684,-!p2@MYCL1!1.00!8.91!MYCL1;;chr3:71355163..71355209,-!p5@FOXP1!0.98!11.93!FOXP1;;chr1:23857698..23857733,-!p1@E2F2!0.97!15.40!E2F2;;chr3:114819073..114819100,-!p10@ZBTB20!0.97!8.30!ZBTB20;;chr6:1612300..1612324,+!p3@FOXC1!0.97!8.30!FOXC1;;chr17:46703212..46703238,-!p2@HOXB9!0.97!8.30!HOXB9;;chr17:46692624..46692659,-!p3@HOXB8!0.96!8.15!HOXB8;;chr7:97840743..97840786,+!p1@BHLHA15!0.96!8.15!BHLHA15;;chr12:103351694..103351704,+!p6@ASCL1!0.96!8.15!ASCL1;;chr14:36989940..36989957,-!p2@NKX2-1!0.96!8.15!NKX2-1;;chr2:25475120..25475176,-!p2@DNMT3A!0.95!10.87!DNMT3A;;chr1:40105299..40105326,-!p1@HEYL!0.95!8.00!HEYL;;chr1:32930647..32930684,+!p1@ZBTB8B,p4@ZBTB8A!0.95!7.85!ZBTB8B;;chr2:176973275..176973300,+!p4@HOXD10!0.95!7.85!HOXD10;;chr17:46675619..46675642,-!p5@HOXB6!0.95!7.85!HOXB6;;chr17:46692318..46692362,-!p5@HOXB8!0.95!7.85!HOXB8;;chr6:21593973..21593988,+!p1@SOX4!0.94!287.13!SOX4;;chr1:214161358..214161377,+!p3@PROX1!0.94!7.70!PROX1;;chr20:32274179..32274213,-!p1@E2F1!0.93!51.78!E2F1;;chr18:45663490..45663528,-!p2@ZBTB7C!0.93!7.55!ZBTB7C;;chr1:8763440..8763460,-!p2@RERE!0.92!38.34!RERE;;chr6:126240442..126240459,+!p4@NCOA7!0.92!9.51!NCOA7;;chr7:27190547..27190591,-!p1@HOXA6!0.92!7.40!HOXA6;;chr17:46667628..46667642,-!p2@HOXB3!0.92!7.40!HOXB3;;chr2:176972047..176972063,+!p7@HOXD11!0.92!7.40!HOXD11;;chr2:176981499..176981522,+!p2@HOXD10!0.92!7.40!HOXD10;;chrX:84499081..84499115,+!p2@ZNF711!0.91!10.72!ZNF711;;chr9:37034469..37034474,-!p1@PAX5!0.91!7.10!PAX5;;chr6:15401104..15401166,+!p5@JARID2!0.91!7.10!JARID2;;chr1:25256756..25256774,-!p1@RUNX3!0.90!13.59!RUNX3;;chr20:32274150..32274166,-!p2@E2F1!0.90!13.28!E2F1;;chr6:1612248..1612281,+!p2@FOXC1!0.90!7.55!FOXC1;;chr14:29236269..29236285,+!p3@FOXG1!0.90!6.94!FOXG1;;chr7:64838786..64838809,+!p2@ZNF92!0.89!40.91!ZNF92;;chr9:14314131..14314147,-!p2@NFIB!0.89!39.70!NFIB;;chr5:134369905..134369972,-!p1@PITX1!0.89!10.57!PITX1;;chr10:48355030..48355090,+!p1@ZNF488!0.89!8.91!ZNF488;;chr11:66188503..66188511,+!p1@NPAS4!0.89!6.79!NPAS4;;chr2:46524897..46524911,+!p2@EPAS1!0.88!19.17!EPAS1;;chr8:60031682..60031710,-!p2@TOX!0.88!10.87!TOX;;chr17:46688334..46688385,-!p1@HOXB7!0.88!9.66!HOXB7;;chr18:56940663..56940691,-!p2@RAX!0.88!6.64!RAX;;chr2:242556900..242556916,-!p6@THAP4!0.88!6.64!THAP4;;chr14:37131058..37131139,+!p1@PAX9!0.88!6.64!PAX9;;chr1:42800848..42800859,-!p2@FOXJ3!0.87!18.87!FOXJ3;;chr6:126240463..126240489,+!p6@NCOA7!0.87!7.25!NCOA7;;chr11:101000537..101000553,-!p1@PGR!0.87!6.49!PGR;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!0.86!37.44!ZNF10;;chr6:20402102..20402152,+!p1@E2F3!0.86!27.02!E2F3;;chr5:321810..321877,+!p1@AHRR!0.86!20.83!AHRR;;chr18:42260059..42260132,+!p1@SETBP1!0.86!10.57!SETBP1;;chr8:60031809..60031835,-!p4@TOX!0.86!8.00!TOX;;chr7:101917482..101917507,+!p6@CUX1!0.86!6.19!CUX1;;chr11:615942..615957,-!p1@IRF7!0.85!61.44!IRF7;;chr3:71179699..71179744,-!p2@FOXP1!0.85!48.61!FOXP1;;chr18:53257027..53257052,-!p3@TCF4!0.85!25.66!TCF4;;chr9:99180617..99180658,-!p1@ZNF367!0.85!14.04!ZNF367;;chr2:176994919..176994931,+!p2@HOXD8!0.85!6.04!HOXD8;;chr17:7197911..7197964,-!p1@YBX2!0.85!6.04!YBX2;;chr17:74137321..74137337,-!p1@FOXJ1!0.85!6.04!FOXJ1;;chr2:200322654..200322707,-!p2@SATB2!0.84!8.76!SATB2;;chr2:200320768..200320800,-!p4@SATB2!0.84!5.89!SATB2;;chr14:36989379..36989390,-!p8@NKX2-1!0.84!5.89!NKX2-1;;chr18:56531584..56531646,+!p4@ZNF532!0.83!7.70!ZNF532;;chr19:57183114..57183145,-!p1@ZNF835!0.83!6.49!ZNF835;;chr2:8822176..8822196,+!p1@ID2!0.82!842.37!ID2;;chr2:172967621..172967637,-!p1@DLX2!0.82!16.00!DLX2;;chr9:114287433..114287513,+!p1@ZNF483!0.82!15.25!ZNF483;;chr1:42800836..42800847,-!p3@FOXJ3!0.82!11.78!FOXJ3;;chrX:84498989..84499003,+!p1@ZNF711!0.82!7.85!ZNF711;;chr17:53342311..53342400,+!p1@HLF!0.82!6.49!HLF;;chr4:109089996..109090012,-!p5@LEF1!0.82!5.59!LEF1;;chr7:15726243..15726293,-!p2@MEOX2!0.82!5.59!MEOX2;;chr8:53166916..53166925,-!p10@ST18!0.82!5.59!ST18;;chr13:79177674..79177701,-!p1@POU4F1!0.82!5.59!POU4F1;;chr14:36989336..36989354,-!p5@NKX2-1!0.81!5.43!NKX2-1;;chr2:172949484..172949522,+!p1@DLX1!0.81!5.43!DLX1;;chr9:129376201..129376225,+!p1@LMX1B!0.81!5.43!LMX1B;;chr6:31126291..31126399,+!p1@TCF19!0.80!54.65!TCF19;;chr12:80084737..80084763,-!p3@PAWR!0.80!21.13!PAWR;;chr7:64023410..64023428,-!p2@ZNF680!0.80!8.76!ZNF680;;chr9:96717629..96717644,-!p1@BARX1!0.80!5.28!BARX1;;chr12:124457746..124457828,+!p1@ZNF664!0.79!214.52!ZNF664;;chr1:212782094..212782109,+!p1@ATF3!0.79!154.59!ATF3;;chr5:124084493..124084524,-!p2@ZNF608!0.79!12.38!ZNF608;;chr7:27213893..27213954,-!p1@HOXA10!0.79!5.13!HOXA10;;chr8:60031619..60031676,-!p1@TOX!0.78!11.62!TOX;;chr9:116638634..116638664,+!p2@ZNF618!0.78!10.11!ZNF618;;chr3:42947600..42947680,+!p1@ZNF662!0.78!7.40!ZNF662;;chr16:52580953..52580992,-!p2@TOX3!0.78!4.98!TOX3;;chr17:45928521..45928539,-!p1@SP6!0.78!4.98!SP6;;chr6:1612219..1612239,+!p8@FOXC1!0.78!4.98!FOXC1;;chrX:131623044..131623089,-!p1@MBNL3!0.77!22.19!MBNL3;;chr17:38465413..38465438,+!p5@RARA!0.77!8.15!RARA;;chr16:11846874..11846885,-!p14@ZC3H7A!0.77!4.83!ZC3H7A;;chr16:51185172..51185197,-!p1@SALL1!0.77!4.83!SALL1;;chr19:53758058..53758088,-!p2@ZNF677!0.76!16.91!ZNF677;;chr6:126102254..126102289,+!p5@NCOA7!0.76!14.19!NCOA7;;chr10:70320074..70320106,+!p1@TET1!0.76!10.27!TET1;;ch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FF:10562-108A4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 14:29, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0